BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0147.p (233 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775861.1| branched-chain amino acid ABC transporter AT... 464 e-129 ref|YP_554643.1| branched chain amino acid ABC transporter ATPas... 318 5e-85 ref|ZP_06839807.1| ABC transporter related protein [Burkholderia... 318 6e-85 ref|YP_001888076.1| ABC transporter-like protein [Burkholderia p... 316 2e-84 ref|ZP_03269306.1| ABC transporter related [Burkholderia sp. H16... 315 3e-84 ref|YP_003608044.1| ABC transporter [Burkholderia sp. CCGE1002] ... 315 3e-84 ref|YP_004230746.1| ABC transporter-like protein [Burkholderia s... 314 6e-84 ref|YP_003910329.1| ABC transporter-like protein [Burkholderia s... 313 1e-83 ref|ZP_02884220.1| ABC transporter related [Burkholderia gramini... 312 2e-83 ref|YP_995657.1| ABC transporter-like protein [Verminephrobacter... 312 2e-83 >ref|YP_003775861.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ63953.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 233 Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust. Identities = 231/233 (99%), Positives = 232/233 (99%) Query: 1 MSQCLLQAQGLHGWYADAHILFGLDLEIRAGEVVALMGRNGAGKSTTLKALMGLLERRQG 60 MSQCLLQ QGLHGWYADAHILFGLDLEIRAGEVVALMGRNGAGKSTTLKALMGLLERRQG Sbjct: 1 MSQCLLQVQGLHGWYADAHILFGLDLEIRAGEVVALMGRNGAGKSTTLKALMGLLERRQG 60 Query: 61 QVRLAGRDIGKLAPHQRARLGLGYVPEDRRIFTELSVLENLETGRQPPRPGAPHWTPQAL 120 Q+RLAGRDIGKLAPHQRARLGLGYVPEDRRIFTELSVLENLETGRQPPRPGAPHWTPQAL Sbjct: 61 QIRLAGRDIGKLAPHQRARLGLGYVPEDRRIFTELSVLENLETGRQPPRPGAPHWTPQAL 120 Query: 121 FELFPNLGAMPQRLGGRMSGGEQQMLTIARTLMGNPRLLLLDEPSEGVAPVIVEQMAAMI 180 FELFPNLGAMPQRLGGRMSGGEQQMLTIARTLMGNPRLLLLDEPSEGVAPVIVEQMAAMI Sbjct: 121 FELFPNLGAMPQRLGGRMSGGEQQMLTIARTLMGNPRLLLLDEPSEGVAPVIVEQMAAMI 180 Query: 181 QELKRSGIAILLCEQNLHFASLVCDRGYLLDQGRIVAAGTPASLQAHQQQSGL 233 QELKRSGIAILLCEQNLHFASLVCDRGYLLDQGRIVAAGTPASLQAHQQQSGL Sbjct: 181 QELKRSGIAILLCEQNLHFASLVCDRGYLLDQGRIVAAGTPASLQAHQQQSGL 233 >ref|YP_554643.1| branched chain amino acid ABC transporter ATPase [Burkholderia xenovorans LB400] gb|ABE35293.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 237 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 152/228 (66%), Positives = 188/228 (82%) Query: 1 MSQCLLQAQGLHGWYADAHILFGLDLEIRAGEVVALMGRNGAGKSTTLKALMGLLERRQG 60 MS+ +L+ GL+ +Y AHILF + LE+ GEVVALMGRNGAGKSTT+KA+MGLL RRQG Sbjct: 1 MSEPMLKVSGLNAFYGRAHILFDVGLEVGRGEVVALMGRNGAGKSTTMKAVMGLLPRRQG 60 Query: 61 QVRLAGRDIGKLAPHQRARLGLGYVPEDRRIFTELSVLENLETGRQPPRPGAPHWTPQAL 120 +V G++I L P++ AR+G+G+VPEDRR+F +L+V+ENL+TGRQPPR GAP WTP+ L Sbjct: 61 EVNFRGQNIAALPPYRIARMGMGFVPEDRRVFADLTVMENLDTGRQPPREGAPQWTPEKL 120 Query: 121 FELFPNLGAMPQRLGGRMSGGEQQMLTIARTLMGNPRLLLLDEPSEGVAPVIVEQMAAMI 180 F LFPNLG MPQR GG+MSGGEQQMLT++RTLMGNP L+LLDEPSEGVAPVIVEQMA MI Sbjct: 121 FRLFPNLGEMPQRPGGQMSGGEQQMLTVSRTLMGNPYLVLLDEPSEGVAPVIVEQMANMI 180 Query: 181 QELKRSGIAILLCEQNLHFASLVCDRGYLLDQGRIVAAGTPASLQAHQ 228 ELKR G++ILL EQNLHFA LV DR Y+L++G+I +GT L ++ Sbjct: 181 LELKREGLSILLSEQNLHFAELVSDRAYVLEKGQIRFSGTIGELAQNE 228 >ref|ZP_06839807.1| ABC transporter related protein [Burkholderia sp. Ch1-1] gb|EFG72637.1| ABC transporter related protein [Burkholderia sp. Ch1-1] Length = 237 Score = 318 bits (814), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 152/228 (66%), Positives = 188/228 (82%) Query: 1 MSQCLLQAQGLHGWYADAHILFGLDLEIRAGEVVALMGRNGAGKSTTLKALMGLLERRQG 60 MS+ +L+ GL+ +Y AHILF + LE+ GEVVALMGRNGAGKSTT+KA+MGLL RRQG Sbjct: 1 MSEPMLKVSGLNAFYGRAHILFDVGLEVGRGEVVALMGRNGAGKSTTMKAVMGLLPRRQG 60 Query: 61 QVRLAGRDIGKLAPHQRARLGLGYVPEDRRIFTELSVLENLETGRQPPRPGAPHWTPQAL 120 +V G++I L P++ AR+G+G+VPEDRR+F +L+V+ENL+TGRQPPR GAP WTP+ L Sbjct: 61 EVSFRGQNIAALPPYRIARMGMGFVPEDRRVFADLTVMENLDTGRQPPREGAPQWTPEKL 120 Query: 121 FELFPNLGAMPQRLGGRMSGGEQQMLTIARTLMGNPRLLLLDEPSEGVAPVIVEQMAAMI 180 F LFPNLG MPQR GG+MSGGEQQMLT++RTLMGNP L+LLDEPSEGVAPVIVEQMA MI Sbjct: 121 FRLFPNLGEMPQRPGGQMSGGEQQMLTVSRTLMGNPYLVLLDEPSEGVAPVIVEQMANMI 180 Query: 181 QELKRSGIAILLCEQNLHFASLVCDRGYLLDQGRIVAAGTPASLQAHQ 228 ELKR G++ILL EQNLHFA LV DR Y+L++G+I +GT L ++ Sbjct: 181 LELKREGLSILLSEQNLHFAELVSDRAYVLEKGQIRFSGTIGELAQNE 228 >ref|YP_001888076.1| ABC transporter-like protein [Burkholderia phytofirmans PsJN] gb|ACD18706.1| ABC transporter related [Burkholderia phytofirmans PsJN] Length = 237 Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 152/228 (66%), Positives = 186/228 (81%) Query: 1 MSQCLLQAQGLHGWYADAHILFGLDLEIRAGEVVALMGRNGAGKSTTLKALMGLLERRQG 60 MS+ +L+ GL+ +Y AHILF + LE+ GEVVALMGRNGAGKSTT+KA+MGLL RRQG Sbjct: 1 MSEPMLKVSGLNAFYGRAHILFDVGLEVGRGEVVALMGRNGAGKSTTMKAVMGLLPRRQG 60 Query: 61 QVRLAGRDIGKLAPHQRARLGLGYVPEDRRIFTELSVLENLETGRQPPRPGAPHWTPQAL 120 +V G++I L P++ AR+G+G+VPEDRR+F +L+V+ENL TGRQPPR GAP WTP+ L Sbjct: 61 EVSFRGQNITALPPYKIARMGMGFVPEDRRVFADLTVMENLATGRQPPRDGAPQWTPEKL 120 Query: 121 FELFPNLGAMPQRLGGRMSGGEQQMLTIARTLMGNPRLLLLDEPSEGVAPVIVEQMAAMI 180 F LFPNLG MPQR GG+MSGGEQQMLT++RTLMGNP L+LLDEPSEGVAPVIVEQMA MI Sbjct: 121 FRLFPNLGEMPQRPGGQMSGGEQQMLTVSRTLMGNPYLVLLDEPSEGVAPVIVEQMANMI 180 Query: 181 QELKRSGIAILLCEQNLHFASLVCDRGYLLDQGRIVAAGTPASLQAHQ 228 ELKR G++ILL EQNLHFA LV DR Y+L++G+I GT L ++ Sbjct: 181 LELKREGLSILLSEQNLHFAELVSDRAYVLEKGQIRFGGTIGELAQNE 228 >ref|ZP_03269306.1| ABC transporter related [Burkholderia sp. H160] gb|EDZ99131.1| ABC transporter related [Burkholderia sp. H160] Length = 237 Score = 315 bits (808), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 151/224 (67%), Positives = 185/224 (82%) Query: 1 MSQCLLQAQGLHGWYADAHILFGLDLEIRAGEVVALMGRNGAGKSTTLKALMGLLERRQG 60 MS+ +L+ GL+ +Y AHILF + LE+ GEVVALMGRNGAGKSTT+KA+MGLL RR G Sbjct: 1 MSEPMLKVSGLNAFYGRAHILFDVGLEVGRGEVVALMGRNGAGKSTTMKAVMGLLPRRHG 60 Query: 61 QVRLAGRDIGKLAPHQRARLGLGYVPEDRRIFTELSVLENLETGRQPPRPGAPHWTPQAL 120 +V G++I LAP++ AR+G+G+VPEDRR+F +L+V+ENL+TGRQPPR GAP WTP L Sbjct: 61 EVTFRGQNISALAPYKIARMGVGFVPEDRRVFADLTVMENLDTGRQPPREGAPQWTPDKL 120 Query: 121 FELFPNLGAMPQRLGGRMSGGEQQMLTIARTLMGNPRLLLLDEPSEGVAPVIVEQMAAMI 180 F LFPNLG MP+R GG+MSGGEQQMLT++RTLMGNP L+LLDEPSEGVAPVIVEQMA MI Sbjct: 121 FRLFPNLGEMPKRPGGQMSGGEQQMLTVSRTLMGNPYLVLLDEPSEGVAPVIVEQMANMI 180 Query: 181 QELKRSGIAILLCEQNLHFASLVCDRGYLLDQGRIVAAGTPASL 224 ELKR G++ILL EQNLHFA LV DR Y+L++G+I +GT L Sbjct: 181 LELKREGLSILLSEQNLHFAELVSDRAYVLEKGQIRFSGTIGEL 224 >ref|YP_003608044.1| ABC transporter [Burkholderia sp. CCGE1002] gb|ADG18533.1| ABC transporter related protein [Burkholderia sp. CCGE1002] Length = 237 Score = 315 bits (808), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 151/228 (66%), Positives = 187/228 (82%) Query: 1 MSQCLLQAQGLHGWYADAHILFGLDLEIRAGEVVALMGRNGAGKSTTLKALMGLLERRQG 60 MS+ +L+ GL+ +Y AHILF + LE+ GEVVALMGRNGAGKSTT+KA+MGLL RR G Sbjct: 1 MSEPMLKVAGLNAFYGRAHILFDVGLEVGRGEVVALMGRNGAGKSTTMKAVMGLLPRRHG 60 Query: 61 QVRLAGRDIGKLAPHQRARLGLGYVPEDRRIFTELSVLENLETGRQPPRPGAPHWTPQAL 120 +V G++I LAP++ AR+G+G+VPEDRR+F +L+V+ENL+TGRQPPR GAP WTP L Sbjct: 61 EVTFRGQNISALAPYKIARMGVGFVPEDRRVFADLTVMENLDTGRQPPREGAPQWTPDKL 120 Query: 121 FELFPNLGAMPQRLGGRMSGGEQQMLTIARTLMGNPRLLLLDEPSEGVAPVIVEQMAAMI 180 F LFPNLG MP+R GG+MSGGEQQMLT++RTLMGNP L+LLDEPSEGVAPVIVEQMA MI Sbjct: 121 FRLFPNLGEMPKRPGGQMSGGEQQMLTVSRTLMGNPYLVLLDEPSEGVAPVIVEQMANMI 180 Query: 181 QELKRSGIAILLCEQNLHFASLVCDRGYLLDQGRIVAAGTPASLQAHQ 228 ELKR G++ILL EQNLHFA LV DR Y+L++G+I +GT L ++ Sbjct: 181 LELKREGLSILLSEQNLHFAELVSDRAYVLEKGQIRFSGTIGELARNE 228 >ref|YP_004230746.1| ABC transporter-like protein [Burkholderia sp. CCGE1001] gb|ADX57686.1| ABC transporter related protein [Burkholderia sp. CCGE1001] Length = 237 Score = 314 bits (805), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 150/228 (65%), Positives = 187/228 (82%) Query: 1 MSQCLLQAQGLHGWYADAHILFGLDLEIRAGEVVALMGRNGAGKSTTLKALMGLLERRQG 60 MS+ +L+ GL+ +Y AHILF + LE+ GEVVALMGRNGAGKSTT+KA+MGLL RR+G Sbjct: 1 MSEPMLKVAGLNAFYGRAHILFDVGLEVGRGEVVALMGRNGAGKSTTMKAVMGLLPRRRG 60 Query: 61 QVRLAGRDIGKLAPHQRARLGLGYVPEDRRIFTELSVLENLETGRQPPRPGAPHWTPQAL 120 +V G++I L P++ AR+G+G+VPEDRR+F +L+V+ENL+TGRQPPR GAP WTP+ L Sbjct: 61 EVTFRGQNIAALPPYKIARMGMGFVPEDRRVFADLTVMENLDTGRQPPREGAPQWTPEKL 120 Query: 121 FELFPNLGAMPQRLGGRMSGGEQQMLTIARTLMGNPRLLLLDEPSEGVAPVIVEQMAAMI 180 F LFPNLG MP+R GG+MSGGEQQMLT++RTLMGNP L+LLDEPSEGVAPVIVEQMA MI Sbjct: 121 FRLFPNLGEMPKRPGGQMSGGEQQMLTVSRTLMGNPYLVLLDEPSEGVAPVIVEQMANMI 180 Query: 181 QELKRSGIAILLCEQNLHFASLVCDRGYLLDQGRIVAAGTPASLQAHQ 228 ELKR G++ILL EQNLHFA LV DR Y+L++G+I GT L ++ Sbjct: 181 LELKREGLSILLSEQNLHFAELVSDRAYVLEKGQIRFGGTIGELAKNE 228 >ref|YP_003910329.1| ABC transporter-like protein [Burkholderia sp. CCGE1003] gb|ADN61038.1| ABC transporter related protein [Burkholderia sp. CCGE1003] Length = 237 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 150/228 (65%), Positives = 187/228 (82%) Query: 1 MSQCLLQAQGLHGWYADAHILFGLDLEIRAGEVVALMGRNGAGKSTTLKALMGLLERRQG 60 MS+ +L+ GL+ +Y AHILF + LE+ GEVVALMGRNGAGKSTT+KA+MGLL RR+G Sbjct: 1 MSEPMLKVAGLNAFYGRAHILFDVGLEVGRGEVVALMGRNGAGKSTTMKAIMGLLPRRRG 60 Query: 61 QVRLAGRDIGKLAPHQRARLGLGYVPEDRRIFTELSVLENLETGRQPPRPGAPHWTPQAL 120 QV G++I L P++ AR+G+G+VPEDRR+F +L+V+ENL+TGRQPPR GAP WTP+ L Sbjct: 61 QVTFRGQNIAALPPYRIARMGMGFVPEDRRVFADLTVMENLDTGRQPPREGAPQWTPEKL 120 Query: 121 FELFPNLGAMPQRLGGRMSGGEQQMLTIARTLMGNPRLLLLDEPSEGVAPVIVEQMAAMI 180 F LFPNLG MP+R GG+MSGGEQQMLT++RTLMGNP L+LLDEPSEGVAPVIVEQMA MI Sbjct: 121 FRLFPNLGEMPRRPGGQMSGGEQQMLTVSRTLMGNPYLVLLDEPSEGVAPVIVEQMANMI 180 Query: 181 QELKRSGIAILLCEQNLHFASLVCDRGYLLDQGRIVAAGTPASLQAHQ 228 ELKR G++ILL EQNLHFA LV DR Y+L++G+I +G L ++ Sbjct: 181 LELKREGLSILLSEQNLHFAELVSDRAYVLEKGQIRFSGAIGELAKNE 228 >ref|ZP_02884220.1| ABC transporter related [Burkholderia graminis C4D1M] gb|EDT10224.1| ABC transporter related [Burkholderia graminis C4D1M] Length = 237 Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 148/228 (64%), Positives = 187/228 (82%) Query: 1 MSQCLLQAQGLHGWYADAHILFGLDLEIRAGEVVALMGRNGAGKSTTLKALMGLLERRQG 60 MS+ +L+ GL+ +Y AHILF + LE+ GEVVALMGRNGAGKSTT+KA+MGLL RRQG Sbjct: 1 MSEPMLKVAGLNAFYGRAHILFDVGLEVGRGEVVALMGRNGAGKSTTMKAVMGLLPRRQG 60 Query: 61 QVRLAGRDIGKLAPHQRARLGLGYVPEDRRIFTELSVLENLETGRQPPRPGAPHWTPQAL 120 +V G++I L P++ AR+G+G+VPEDRR+F +L+V+ENL+ GRQPPR GAP WTP+ L Sbjct: 61 EVTFRGQNIAALPPYKIARMGMGFVPEDRRVFADLTVMENLDAGRQPPREGAPQWTPEKL 120 Query: 121 FELFPNLGAMPQRLGGRMSGGEQQMLTIARTLMGNPRLLLLDEPSEGVAPVIVEQMAAMI 180 F LFPNLG MP+R GG+MSGGEQQMLT++RTLMGNP L+LLDEPSEGVAPVIVEQMA MI Sbjct: 121 FRLFPNLGEMPRRPGGQMSGGEQQMLTVSRTLMGNPYLVLLDEPSEGVAPVIVEQMANMI 180 Query: 181 QELKRSGIAILLCEQNLHFASLVCDRGYLLDQGRIVAAGTPASLQAHQ 228 ELKR G++ILL EQNLHFA +V DR Y+L++G+I +G+ L ++ Sbjct: 181 LELKREGLSILLSEQNLHFAEMVSDRAYVLEKGQIRFSGSIGELAKNE 228 >ref|YP_995657.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2] gb|ABM56639.1| ABC transporter related [Verminephrobacter eiseniae EF01-2] Length = 536 Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 160/232 (68%), Positives = 184/232 (79%), Gaps = 5/232 (2%) Query: 3 QCLLQAQGLHGWYADAHILFGLDLEIRAGEVVALMGRNGAGKSTTLKALMGLLERRQGQV 62 + LLQA GLH WY A IL+ LDL +R GEVVALMGRNGAGKSTTLKALMGLL RR GQ+ Sbjct: 297 EVLLQATGLHAWYGAAQILYDLDLYVRRGEVVALMGRNGAGKSTTLKALMGLLARRSGQI 356 Query: 63 RLAGRDIGKLAPHQRARLGLGYVPEDRRIFTELSVLENLETGRQPPR-----PGAPHWTP 117 R G+D+ + AP ARLGLGYVPEDRR+FT+L+VLENLE GRQP R AP WTP Sbjct: 357 RFMGQDLSRSAPQAAARLGLGYVPEDRRVFTDLTVLENLEVGRQPERRWPDGTAAPAWTP 416 Query: 118 QALFELFPNLGAMPQRLGGRMSGGEQQMLTIARTLMGNPRLLLLDEPSEGVAPVIVEQMA 177 + LF LFPNLGAMP R GGR+SGGEQQMLT+ARTLMGNP LLLLDEPSEGVAPVIVEQMA Sbjct: 417 ERLFALFPNLGAMPHRPGGRISGGEQQMLTVARTLMGNPLLLLLDEPSEGVAPVIVEQMA 476 Query: 178 AMIQELKRSGIAILLCEQNLHFASLVCDRGYLLDQGRIVAAGTPASLQAHQQ 229 MI ELK G++ILL EQN+HFA LV DR Y+L++G+I + A L A+++ Sbjct: 477 RMILELKAQGVSILLSEQNMHFAELVSDRAYVLEKGQIRYQASMAELAANEE 528 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/235 (32%), Positives = 117/235 (49%), Gaps = 12/235 (5%) Query: 4 CLLQAQGLHGWYADAHILFGLDLEIRAGEVVALMGRNGAGKSTTLKALMGLLERRQGQVR 63 LL GL + + G+ + AGE++AL+G NGAGKSTT + G L G + Sbjct: 23 SLLTVTGLGKSFGAVKAVDGIGFTLAAGELLALIGPNGAGKSTTFNMINGQLSADTGSIM 82 Query: 64 LAGRDIGKLAPHQRARLGLGYVPEDRRIFTELSVLENLETGRQPP--------RPGAPHW 115 L G+ + P Q RLG+G + F L+VLEN++ R A H Sbjct: 83 LDGQPLRGRRPRQIFRLGVGRTFQIAETFASLTVLENVQMALLAHEQRLFSFWRKAADHR 142 Query: 116 TPQALFELFPNLGAMPQ--RLGGRMSGGEQQMLTIARTLMGNPRLLLLDEPSEGVAPVIV 173 AL L +G PQ R ++ G+ + + +A L +PRLLL+DEP+ G+AP Sbjct: 143 RDAAL-ALLDQVGLQPQADRPCHALAYGDIKRVELAMALAHDPRLLLMDEPTAGMAPKER 201 Query: 174 EQMAAMIQELKRS-GIAILLCEQNLHFASLVCDRGYLLDQGRIVAAGTPASLQAH 227 + A+ ++L R +A+L E ++ DR +L +GR++A G P +L+ H Sbjct: 202 NALMALTRQLVRGRSMAVLFTEHSMDVVFAHADRMIVLARGRLIAEGKPLALREH 256