BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0126.p (808 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775881.1| chemotaxis histidine kinase [Herbaspirillum ... 1641 0.0 ref|YP_001353298.1| chemotaxis related protein [Janthinobacteriu... 1053 0.0 ref|YP_003909929.1| CheA signal transduction histidine kinase [B... 928 0.0 ref|ZP_07674155.1| CheA signal transduction histidine kinase (ST... 927 0.0 ref|YP_004231233.1| CheA signal transduction histidine kinase [B... 924 0.0 ref|YP_001890645.1| putative CheA signal transduction histidine ... 924 0.0 ref|YP_552336.1| CheA signal transduction histidine kinases (STH... 924 0.0 ref|ZP_06841438.1| CheA signal transduction histidine kinase [Bu... 920 0.0 ref|YP_001859775.1| putative CheA signal transduction histidine ... 917 0.0 ref|YP_001893345.1| chemotaxis protein CheA [Ralstonia pickettii... 911 0.0 >ref|YP_003775881.1| chemotaxis histidine kinase [Herbaspirillum seropedicae SmR1] gb|ADJ63973.1| chemotaxis histidine kinase protein [Herbaspirillum seropedicae SmR1] Length = 808 Score = 1641 bits (4249), Expect = 0.0, Method: Compositional matrix adjust. Identities = 806/808 (99%), Positives = 807/808 (99%) Query: 1 MTIRMRITLLVILTFIAIAGIGGYAMYQSRSSAVEVRSVTEGVMPSVLASADLMGQLKDV 60 MTIRMRITLLVILTFIAIAGIGGYAMYQSRSSAVEVRSVTEGVMPSVLASADLMGQLKDV Sbjct: 1 MTIRMRITLLVILTFIAIAGIGGYAMYQSRSSAVEVRSVTEGVMPSVLASADLMGQLKDV 60 Query: 61 QLAAMVMVTENDNQLVAQENEKLAEKKAVLEKALAAQAQQAEGVAQRGLIEQAKESLDNY 120 QLAAMVMVTENDNQLVAQENEKLAEKKAVLEKALAAQAQQAEGVAQRGLIEQAKESLDNY Sbjct: 61 QLAAMVMVTENDNQLVAQENEKLAEKKAVLEKALAAQAQQAEGVAQRGLIEQAKESLDNY 120 Query: 121 FGAIDTTAKFKLAGKNEIAQAQFFGGVMQYQTELEGIVNTLRIEKNRFKDNAIASLNGKL 180 FGAIDTTAKFKLAGKNEIAQAQFFGGVMQYQTELEGIVNTLRIEKNRFKDNAIASLNGKL Sbjct: 121 FGAIDTTAKFKLAGKNEIAQAQFFGGVMQYQTELEGIVNTLRIEKNRFKDNAIASLNGKL 180 Query: 181 AQTTTTISIVTVMAVLLLGGIGFLLYRQITGPISRMAAMMGEIATSQDFTRRLPVQRMDE 240 AQTTTTISIVTVMAVLLLGGIGFLLYRQITGPISRMAAMMGEIATSQDFTRRLPVQRMDE Sbjct: 181 AQTTTTISIVTVMAVLLLGGIGFLLYRQITGPISRMAAMMGEIATSQDFTRRLPVQRMDE 240 Query: 241 VGHSIVAFNGMVEKIEEASAQVRQKTADMQAMLQNIPQGILTIVEGNRIHPEYSAFLETV 300 VGHSIVAFNGMVEKIEEASAQVRQKTADMQAMLQNIPQGILTIVEGNRIHPEYSAFLETV Sbjct: 241 VGHSIVAFNGMVEKIEEASAQVRQKTADMQAMLQNIPQGILTIVEGNRIHPEYSAFLETV 300 Query: 301 FETTDIAGRDVMELVFADTQLGADTLSQIEAIGGACIGEDVMNFEFNAHLMVGEIEKTMA 360 FETTDIAGRDVMELVFADTQLGADTLSQIEAIGGACIGEDVMNFEFNAHLMVGEIEKTMA Sbjct: 301 FETTDIAGRDVMELVFADTQLGADTLSQIEAIGGACIGEDVMNFEFNAHLMVGEIEKTMA 360 Query: 361 DGSKKILDLSWSPITDEADTVIRLMLCVRDVTELRQLAAEANEQKRELEMIGEILAVTPA 420 DGSKKILDLSWSPITDEADTVIRLMLCVRDVTELRQLAAEANEQKRELEMIGEILAVTPA Sbjct: 361 DGSKKILDLSWSPITDEADTVIRLMLCVRDVTELRQLAAEANEQKRELEMIGEILAVTPA 420 Query: 421 KFAEFISSARRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLANVVHHT 480 KFAEFISSARRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLANVVHHT Sbjct: 421 KFAEFISSARRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLANVVHHT 480 Query: 481 EQHYDDLRHPASGAVWRQEELLRQLAQVREIIDRYARINDVTLGRGVAAAGEQTLPGYAR 540 EQHYDDLRHPASGAVWRQEELLRQLAQVREIIDRYARINDVTLGRGVAAAGEQTLPGYAR Sbjct: 481 EQHYDDLRHPASGAVWRQEELLRQLAQVREIIDRYARINDVTLGRGVAAAGEQTLPGYAR 540 Query: 541 HVITIDRKHIEQSLERLENVNTANLHELVAVRNDVRRTLRLLGTETIQEVLAPVTDSLPA 600 HVITIDRKHIEQSLERLENVNTANLHELVAVRNDVRRTLRLLGTETIQEVLAPVTDSLPA Sbjct: 541 HVITIDRKHIEQSLERLENVNTANLHELVAVRNDVRRTLRLLGTETIQEVLAPVTDSLPA 600 Query: 601 LAADLGKAAPVVQIEDNGYVVHSFAVPLLQNVFMHLIRNAMDHGLESSEERLAKGKPEAG 660 LAADLGKAAPVVQIEDNGYVVHSFA PLLQNVFMHLIRNAMDHGLESSEERLAKGKPEAG Sbjct: 601 LAADLGKAAPVVQIEDNGYVVHSFAAPLLQNVFMHLIRNAMDHGLESSEERLAKGKPEAG 660 Query: 661 VIKLEMGVMEDMFQMALSDDGRGLALERVRQIGIEKHLITVDQALSDAEIARLILQPGFS 720 VIKLEMGVMEDMFQMALSDDGRGLALERVRQIGIEKHLITVDQALSDAEIARLILQPGFS Sbjct: 661 VIKLEMGVMEDMFQMALSDDGRGLALERVRQIGIEKHLITVDQALSDAEIARLILQPGFS 720 Query: 721 TRSEVTEVSGRGVGMDAVLDFVTREHGQIEIRFTDTEEGAPFRSFQIIVMLPENVAVEVD 780 TRSEVTEVSGRGVGMDAVLDFVTREHGQIEIRFTDTEEGAPFRSFQIIVMLPENVAVEVD Sbjct: 721 TRSEVTEVSGRGVGMDAVLDFVTREHGQIEIRFTDTEEGAPFRSFQIIVMLPENVAVEVD 780 Query: 781 GIDVPYPMGGQETLQPVVLPQGGDSQVA 808 GIDVPYPMGGQET+QPVVLPQGGDSQVA Sbjct: 781 GIDVPYPMGGQETVQPVVLPQGGDSQVA 808 >ref|YP_001353298.1| chemotaxis related protein [Janthinobacterium sp. Marseille] gb|ABR90156.1| Chemotaxis related protein [Janthinobacterium sp. Marseille] Length = 806 Score = 1053 bits (2722), Expect = 0.0, Method: Compositional matrix adjust. Identities = 531/783 (67%), Positives = 626/783 (79%), Gaps = 5/783 (0%) Query: 1 MTIRMRITLLVILTFIAIAGIGGYAMYQSRSSAVEVRSVTEGVMPSVLASADLMGQLKDV 60 MTIR+RITLLVILTFIAI+ IGGYA++QSR SAVEV++VTEGV+PS LAS+DL+ QLK+V Sbjct: 1 MTIRLRITLLVILTFIAISLIGGYAVFQSRGSAVEVKTVTEGVVPSTLASSDLVAQLKEV 60 Query: 61 QLAAMVMVTENDNQLVAQENEKLAEKKAVLEKALAAQAQQAEGVAQRGLIEQAKESLDNY 120 QL+AM +V+E D Q+ Q NEKL+ KK +LEKAL Q +Q + AQRGL+EQAKESL NY Sbjct: 61 QLSAMAIVSEPDMQIAVQNNEKLSAKKDILEKALDLQLKQVDSQAQRGLVEQAKESLVNY 120 Query: 121 FGAIDTTAKFKLAGKNEIAQAQFFGGVMQYQTELEGIVNTLRIEKNRFKDNAIASLNGKL 180 F AID+T + KLAGK+EIA+A FG V+Q+Q ELE I++TLRIEKNR KD AIA+LN L Sbjct: 121 FDAIDSTMQLKLAGKDEIAKASLFGNVVQFQQELEQIIDTLRIEKNRSKDVAIAALNENL 180 Query: 181 AQTTTTISIVTVMAVLLLGGIGFLLYRQITGPISRMAAMMGEIATSQDFTRRLPVQRMDE 240 A TTT I++VT+ AV+ L IGFLLYRQITGPISRM MM EIA SQDFTRR+P+ RMDE Sbjct: 181 ATTTTAITVVTIFAVIFLATIGFLLYRQITGPISRMQRMMSEIAASQDFTRRVPIDRMDE 240 Query: 241 VGHSIVAFNGMVEKIEEASAQVRQKTADMQAMLQNIPQGILTIVEGNRIHPEYSAFLETV 300 VGHSI AFNGM+EKIEEASA VRQKTAD+Q MLQNIPQGILTIV+GN+IHPEYSA+LETV Sbjct: 241 VGHSIKAFNGMLEKIEEASALVRQKTADIQTMLQNIPQGILTIVDGNKIHPEYSAYLETV 300 Query: 301 FETTDIAGRDVMELVFADTQLGADTLSQIEAIGGACIGEDVMNFEFNAHLMVGEIEKTMA 360 FE+ DI GRD+M+ VFADT LGADTL+Q+EAIGGACIGED+MNFEFN HLMVGEIEK M Sbjct: 301 FESKDIVGRDIMDFVFADTNLGADTLAQMEAIGGACIGEDLMNFEFNQHLMVGEIEKRMP 360 Query: 361 DGSKKILDLSWSPITDEADTVIRLMLCVRDVTELRQLAAEANEQKRELEMIGEILAVTPA 420 DG KILDLSWSPI DE D ++RLMLCVRDVTELRQLAAEANEQKRELE+IGEILAV+ Sbjct: 361 DGRVKILDLSWSPIVDENDMIVRLMLCVRDVTELRQLAAEANEQKRELEIIGEILAVSQD 420 Query: 421 KFAEFISSARRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLANVVHHT 480 KF +FI S+ +F+DENE ++ N E++ F +AKLFRNMHTIKGNGRTYGLLHLA++VH Sbjct: 421 KFHDFIVSSLKFIDENELVIRHNTESSDFTVAKLFRNMHTIKGNGRTYGLLHLADIVHEA 480 Query: 481 EQHYDDLRHPASGAVWRQEELLRQLAQVREIIDRYARINDVTLGRGVAAAGEQTLPGYAR 540 EQHYD+LR P S VW Q LL +LA VR ++RYARIN+V+L R G G Sbjct: 481 EQHYDELRKPDSDRVWDQALLLDELAGVRAAVERYARINEVSLSRQGPGRG-----GKVD 535 Query: 541 HVITIDRKHIEQSLERLENVNTANLHELVAVRNDVRRTLRLLGTETIQEVLAPVTDSLPA 600 + ID+KHI++SL RLENVNTANLHELVAVRN VRRTLRLLGTE I E L+ V +S+PA Sbjct: 536 SYLMIDKKHIQESLHRLENVNTANLHELVAVRNAVRRTLRLLGTERIDETLSGVIESMPA 595 Query: 601 LAADLGKAAPVVQIEDNGYVVHSFAVPLLQNVFMHLIRNAMDHGLESSEERLAKGKPEAG 660 LA +LGK AP ++I+D GYVVH+ LL++VFMHLIRNAMDHG+E+ E R+A GKPEAG Sbjct: 596 LAQELGKIAPKIEIKDGGYVVHNQISALLKDVFMHLIRNAMDHGIETPEVRVALGKPEAG 655 Query: 661 VIKLEMGVMEDMFQMALSDDGRGLALERVRQIGIEKHLITVDQALSDAEIARLILQPGFS 720 I L M + E M + L DDGRGLAL+R+RQI ++K L L D ARLILQ GFS Sbjct: 656 KISLGMDMDEKMLNITLRDDGRGLALKRIRQIALDKGLSDAPDQLDDLAAARLILQAGFS 715 Query: 721 TRSEVTEVSGRGVGMDAVLDFVTREHGQIEIRFTDTEEGAPFRSFQIIVMLPENVAVEVD 780 T +V+EVSGRGVGMDAVL FV+RE+G I+IRF D GA FR F IIV LP AV+ D Sbjct: 716 TADKVSEVSGRGVGMDAVLAFVSRENGSIDIRFDDEATGADFRQFHIIVALPAAFAVKAD 775 Query: 781 GID 783 D Sbjct: 776 EAD 778 >ref|YP_003909929.1| CheA signal transduction histidine kinase [Burkholderia sp. CCGE1003] gb|ADN60638.1| CheA signal transduction histidine kinase [Burkholderia sp. CCGE1003] Length = 796 Score = 928 bits (2399), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/783 (60%), Positives = 592/783 (75%), Gaps = 2/783 (0%) Query: 1 MTIRMRITLLVILTFIAIAGIGGYAMYQSRSSAVEVRSVTEGVMPSVLASADLMGQLKDV 60 MTIR RITLLV+L F+A++ IGGYA+YQ+R SA EVR VTEGV+PS LASADL+ Q+KDV Sbjct: 1 MTIRHRITLLVVLMFVALSAIGGYAVYQTRGSAAEVRKVTEGVVPSALASADLVSQVKDV 60 Query: 61 QLAAMVMVTENDNQLVAQENEKLAEKKAVLEKALAAQAQQAEGVAQRGLIEQAKESLDNY 120 Q+A M +V D +VAQ E+L +K+ LE+ALA QA+ A AQ+GL+ QA++SLDNY Sbjct: 61 QIATMTLVYAPDGDMVAQAQEELKKKRIALEQALALQAKDAASHAQKGLVSQARDSLDNY 120 Query: 121 FGAIDTTAKFKLAGKNEIAQAQFFGGVMQYQTELEGIVNTLRIEKNRFKDNAIASLNGKL 180 F AI TAK K GKNE+AQA F V QY+ ELEGIV+TLR+EKNR KD AI +LN L Sbjct: 121 FSAIAETAKMKADGKNELAQAYLFANVAQYRDELEGIVDTLRVEKNRQKDEAITALNATL 180 Query: 181 AQTTTTISIVTVMAVLLLGGIGFLLYRQITGPISRMAAMMGEIATSQDFTRRLPVQRMDE 240 A TTT I+ VT +A+LLL IG LLYRQIT P+SRM AMM EIA+SQDFTRR+PV R+DE Sbjct: 181 ATTTTAIAAVTGIAILLLTSIGALLYRQITRPLSRMQAMMSEIASSQDFTRRVPVGRLDE 240 Query: 241 VGHSIVAFNGMVEKIEEASAQVRQKTADMQAMLQNIPQGILTIVEGNRIHPEYSAFLETV 300 +GHSIVAFNGM+EKI+E+SAQ++QKTAD+QAMLQN+ QGILT+++G IH EYSA+LE + Sbjct: 241 IGHSIVAFNGMIEKIQESSAQLKQKTADIQAMLQNMQQGILTVIDGAVIHAEYSAYLEDI 300 Query: 301 FETTDIAGRDVMELVFADTQLGADTLSQIEAIGGACIGEDVMNFEFNAHLMVGEIEKTMA 360 FET DIAGR +M+LVFADT LGAD LSQ++A AC+GED +NF FN HL+VGEI K M Sbjct: 301 FETKDIAGRSLMDLVFADTDLGADALSQVDAAAHACLGEDCINFAFNQHLLVGEISKRMP 360 Query: 361 DGSKKILDLSWSPITDEADTVIRLMLCVRDVTELRQLAAEANEQKRELEMIGEILAVTPA 420 DG KILDLSWS ITDE D ++RLMLCVRDVTELR+LAAEA+EQ+R L+MIGEILAV+ Sbjct: 361 DGRVKILDLSWSAITDENDVIVRLMLCVRDVTELRKLAAEASEQRRRLDMIGEILAVSEE 420 Query: 421 KFAEFISSARRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLANVVHHT 480 KF FI S+ F+ ENE+I+ ++ EA AIA+LFRNMHTIKGN RTY L HL +VVH T Sbjct: 421 KFHHFIESSAGFISENERIIRKHSEADHAAIAELFRNMHTIKGNARTYNLQHLTDVVHET 480 Query: 481 EQHYDDLRHPASGAVWRQEELLRQLAQVREIIDRYARINDVTLGRGVAAAGEQTLPGYAR 540 EQ Y +LR P + W QE L+++LA+VRE I+ YARIN+ +LGR A + G A Sbjct: 481 EQSYHELRRPDADRSWDQEHLMQELARVREAIEAYARINEHSLGRKGQA--RRNDAGNAG 538 Query: 541 HVITIDRKHIEQSLERLENVNTANLHELVAVRNDVRRTLRLLGTETIQEVLAPVTDSLPA 600 + ++++ I+++L L+ + LHEL A+ +RR LR LG+E+I++ L+ V SLP+ Sbjct: 539 RYVMVEKEQIQRTLNLLDTTDVNALHELQALHGTLRRNLRALGSESIRDALSGVLGSLPS 598 Query: 601 LAADLGKAAPVVQIEDNGYVVHSFAVPLLQNVFMHLIRNAMDHGLESSEERLAKGKPEAG 660 LA +LGK P VQI+DNGY + A LL NVFMHL+RN+MDHG+ES+E R A+GK G Sbjct: 599 LAGELGKPTPSVQIDDNGYRLRGHAGSLLNNVFMHLLRNSMDHGIESAEARSAQGKAPEG 658 Query: 661 VIKLEMGVMEDMFQMALSDDGRGLALERVRQIGIEKHLITVDQALSDAEIARLILQPGFS 720 I +E+GV + Q+ LSDDGRGLALER+R I IE+ I D A+SD IA I +PGFS Sbjct: 659 TISIEVGVDSGVLQITLSDDGRGLALERIRGIAIERGWIGRDDAVSDEAIADFIFRPGFS 718 Query: 721 TRSEVTEVSGRGVGMDAVLDFVTREHGQIEIRFTDTEEGAPFRSFQIIVMLPENVAVEVD 780 T VT VSGRGVGMDAV DF+ RE+G IE+RFTD +GA FR FQ IV LP+++AV+ Sbjct: 719 TAETVTAVSGRGVGMDAVRDFLKRENGSIELRFTDDHKGAAFRQFQTIVCLPDSMAVDTL 778 Query: 781 GID 783 G + Sbjct: 779 GTE 781 >ref|ZP_07674155.1| CheA signal transduction histidine kinase (STHK) [Ralstonia sp. 5_7_47FAA] gb|EFP67586.1| CheA signal transduction histidine kinase (STHK) [Ralstonia sp. 5_7_47FAA] Length = 794 Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/778 (59%), Positives = 582/778 (74%), Gaps = 5/778 (0%) Query: 1 MTIRMRITLLVILTFIAIAGIGGYAMYQSRSSAVEVRSVTEGVMPSVLASADLMGQLKDV 60 MTIR RITLLV+L F+A+A IGGYA+YQ+RSSA EVR VTEGV+PS LASADL+ +KDV Sbjct: 1 MTIRHRITLLVVLMFVALAAIGGYAVYQTRSSAAEVRQVTEGVVPSALASADLVSLVKDV 60 Query: 61 QLAAMVMVTENDNQLVAQENEKLAEKKAVLEKALAAQAQQAEGVAQRGLIEQAKESLDNY 120 QLA MV+V D +VAQ + L K+A L AL QA++A AQ GL+ QAKE++D+Y Sbjct: 61 QLATMVLVYAPDANIVAQAKDDLKAKEAALRAALDVQAKRANSHAQEGLVAQAKEAVDSY 120 Query: 121 FGAIDTTAKFKLAGKNEIAQAQFFGGVMQYQTELEGIVNTLRIEKNRFKDNAIASLNGKL 180 AI T KLAGK+E+AQA F V Y+ LE IV TLRIEKNR KD AIA LNGKL Sbjct: 121 VDAIQQTTDMKLAGKDELAQAFLFANVASYRDVLEKIVETLRIEKNREKDEAIAGLNGKL 180 Query: 181 AQTTTTISIVTVMAVLLLGGIGFLLYRQITGPISRMAAMMGEIATSQDFTRRLPVQRMDE 240 A T TTI +V+ +AV+LL IG LLYRQIT P++RM A M EIATSQDFTRR+PV RMDE Sbjct: 181 ASTATTIGVVSGVAVVLLTAIGMLLYRQITRPLTRMQAEMSEIATSQDFTRRVPVGRMDE 240 Query: 241 VGHSIVAFNGMVEKIEEASAQVRQKTADMQAMLQNIPQGILTIVEGNRIHPEYSAFLETV 300 +GHS+VAFN M+EKI+E +A ++QKTAD+QAMLQN+ QGILT+VEG +H EYS +LE++ Sbjct: 241 IGHSVVAFNQMIEKIQENAALLKQKTADIQAMLQNMQQGILTVVEGGVVHEEYSVYLESI 300 Query: 301 FETTDIAGRDVMELVFADTQLGADTLSQIEAIGGACIGEDVMNFEFNAHLMVGEIEKTMA 360 FET +IAGR +MEL+FADT LGADTLSQ+EA AC+G+D++NF FN HL+ E+EK M Sbjct: 301 FETQEIAGRRLMELIFADTSLGADTLSQVEAAVDACLGQDIINFAFNQHLLASEVEKRMP 360 Query: 361 DGSKKILDLSWSPITDEADTVIRLMLCVRDVTELRQLAAEANEQKRELEMIGEILAVTPA 420 DG K LDLSWS ITDE+DT++RLMLCVRDVTELR+LAAEA+EQ+R LEMIGEILAV+ Sbjct: 361 DGRTKTLDLSWSAITDESDTILRLMLCVRDVTELRKLAAEASEQRRNLEMIGEILAVSQE 420 Query: 421 KFAEFISSARRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLANVVHHT 480 KF FI S+ F+ ENE+I+ Q +A + AIA LFRNMHTIKGN RTY L HL NVVH T Sbjct: 421 KFQHFIDSSTTFVHENERIIRQYSQADSQAIAALFRNMHTIKGNARTYNLQHLTNVVHET 480 Query: 481 EQHYDDLRHPASGAVWRQEELLRQLAQVREIIDRYARINDVTLGRGVAAAGEQTLPGYAR 540 EQ Y LR S W Q+ L+++LA+VRE I+ YARIN+V LGR AA PG A Sbjct: 481 EQTYHALREADSEHTWDQDWLMQELARVREAIENYARINEVKLGRKGDAA-----PGNAS 535 Query: 541 HVITIDRKHIEQSLERLENVNTANLHELVAVRNDVRRTLRLLGTETIQEVLAPVTDSLPA 600 I++SL LE+ N +L+ELV +R+ V + LRLLG+ET+ +L+ SLP+ Sbjct: 536 QAAPDVMARIQESLRLLESANPGSLYELVVMRDSVYQLLRLLGSETVDALLSGTLQSLPS 595 Query: 601 LAADLGKAAPVVQIEDNGYVVHSFAVPLLQNVFMHLIRNAMDHGLESSEERLAKGKPEAG 660 LA +LGK V+I+DNGY V + A +LQNVFMHL+RN++DHG+E +EER+A+GKP +G Sbjct: 596 LAQELGKEPVAVRIDDNGYRVRTEARGILQNVFMHLLRNSIDHGIEPAEERIAQGKPASG 655 Query: 661 VIKLEMGVMEDMFQMALSDDGRGLALERVRQIGIEKHLITVDQALSDAEIARLILQPGFS 720 I +E+GV + M Q+ L DDGRGLALER+R I +E+ + DQ +D +IA+ I +PGFS Sbjct: 656 TIDIELGVDQGMLQITLCDDGRGLALERIRSIAVERGWLGADQHATDEDIAQCIFRPGFS 715 Query: 721 TRSEVTEVSGRGVGMDAVLDFVTREHGQIEIRFTDTEEGAPFRSFQIIVMLPENVAVE 778 T +VTEVSGRGVGMDAV +F+ RE G+IE+RFTD +GA FR FQ +V LPE AV+ Sbjct: 716 TADKVTEVSGRGVGMDAVQEFLKREQGRIELRFTDDHKGAAFRQFQTVVCLPERFAVD 773 >ref|YP_004231233.1| CheA signal transduction histidine kinase [Burkholderia sp. CCGE1001] gb|ADX58173.1| CheA signal transduction histidine kinase [Burkholderia sp. CCGE1001] Length = 796 Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/781 (59%), Positives = 591/781 (75%), Gaps = 2/781 (0%) Query: 1 MTIRMRITLLVILTFIAIAGIGGYAMYQSRSSAVEVRSVTEGVMPSVLASADLMGQLKDV 60 MTIR RITLLV+L F+A++ IGGYA+YQ+R SA EVR VTEGV+PS LASADL+ Q+KDV Sbjct: 1 MTIRHRITLLVVLMFVALSAIGGYAVYQTRGSAAEVRKVTEGVVPSALASADLVSQVKDV 60 Query: 61 QLAAMVMVTENDNQLVAQENEKLAEKKAVLEKALAAQAQQAEGVAQRGLIEQAKESLDNY 120 QLA M +V D ++AQ ++L +K+ LE+AL QA+ A AQ+GL+ QA++SLDNY Sbjct: 61 QLATMTLVYAPDGDVLAQAQDELKKKRIALEQALTLQAKDAASHAQKGLVLQARDSLDNY 120 Query: 121 FGAIDTTAKFKLAGKNEIAQAQFFGGVMQYQTELEGIVNTLRIEKNRFKDNAIASLNGKL 180 F AI TAK K GKNE+AQA F V QY+ ELEGIV+TLR+EKNR KD AI +LN L Sbjct: 121 FSAIAETAKMKADGKNELAQAYLFANVAQYRDELEGIVDTLRVEKNREKDEAITALNATL 180 Query: 181 AQTTTTISIVTVMAVLLLGGIGFLLYRQITGPISRMAAMMGEIATSQDFTRRLPVQRMDE 240 A TTT I+ VT +A++LL IG LLYRQIT P+SRM AMM EIA+SQDFTRR+PV R+DE Sbjct: 181 ATTTTAIAAVTGIAIILLTSIGALLYRQITRPLSRMQAMMSEIASSQDFTRRVPVGRLDE 240 Query: 241 VGHSIVAFNGMVEKIEEASAQVRQKTADMQAMLQNIPQGILTIVEGNRIHPEYSAFLETV 300 +GHSIVAFNGM+EKI+E+SAQ++QKTAD+QAMLQN+ QGILT+++G IH EYSA+LE + Sbjct: 241 IGHSIVAFNGMIEKIQESSAQLKQKTADIQAMLQNMQQGILTVIDGAVIHAEYSAYLEDI 300 Query: 301 FETTDIAGRDVMELVFADTQLGADTLSQIEAIGGACIGEDVMNFEFNAHLMVGEIEKTMA 360 FET DIAGR +M+LVFADT LGAD LSQ++A AC+GED +NF FN HL+VGEI K M Sbjct: 301 FETRDIAGRGLMDLVFADTDLGADALSQVDAAAHACLGEDCINFAFNQHLLVGEISKRMP 360 Query: 361 DGSKKILDLSWSPITDEADTVIRLMLCVRDVTELRQLAAEANEQKRELEMIGEILAVTPA 420 DG KILDLSWS ITDE D ++RLMLCVRDVTELR+LAAEA+EQ+R L+MIGEILAV+ Sbjct: 361 DGRVKILDLSWSAITDENDVIVRLMLCVRDVTELRKLAAEASEQRRRLDMIGEILAVSEE 420 Query: 421 KFAEFISSARRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLANVVHHT 480 KF FI S+ F+ ENE+I+ ++ EA AIA+LFRNMHTIKGN RTY L HL +VVH T Sbjct: 421 KFHHFIESSAGFISENERIIRKHSEADHAAIAELFRNMHTIKGNARTYNLQHLTDVVHET 480 Query: 481 EQHYDDLRHPASGAVWRQEELLRQLAQVREIIDRYARINDVTLGRGVAAAGEQTLPGYAR 540 EQ Y +LR P + W QE L+R+LA+VRE I+ YARIN+ +LGR ++ G+A Sbjct: 481 EQSYHELRQPDADRSWDQEHLMRELARVREAIEAYARINEQSLGR--KGKTQRHDAGHAG 538 Query: 541 HVITIDRKHIEQSLERLENVNTANLHELVAVRNDVRRTLRLLGTETIQEVLAPVTDSLPA 600 + ++++ I+++L L+ + LH L ++R+ +RR LR LG+E+I++ LA V SLP+ Sbjct: 539 RYVMVEKEEIQRTLNLLDATDANALHALQSMRDTLRRKLRALGSESIRDALAGVLGSLPS 598 Query: 601 LAADLGKAAPVVQIEDNGYVVHSFAVPLLQNVFMHLIRNAMDHGLESSEERLAKGKPEAG 660 LA +LGK AP V I+DNGY + A LL NVFMHL+RN+MDHG+E++E R A+GK AG Sbjct: 599 LAGELGKPAPSVHIDDNGYRLRGHAGGLLNNVFMHLLRNSMDHGIEAAEARSAQGKAPAG 658 Query: 661 VIKLEMGVMEDMFQMALSDDGRGLALERVRQIGIEKHLITVDQALSDAEIARLILQPGFS 720 I +E GV Q+ LSDDGRGLALER+R I +E+ I + LSD IA I +PGFS Sbjct: 659 AISIEAGVDGGALQITLSDDGRGLALERIRGIAMERGWINPGEVLSDEAIAAFIFRPGFS 718 Query: 721 TRSEVTEVSGRGVGMDAVLDFVTREHGQIEIRFTDTEEGAPFRSFQIIVMLPENVAVEVD 780 T VT VSGRGVGMDAV DF+ RE+G IE+RFTD +GAPFR FQ IV LP++VAV+ Sbjct: 719 TADSVTAVSGRGVGMDAVRDFLKRENGSIELRFTDDRKGAPFRQFQTIVSLPDSVAVDTL 778 Query: 781 G 781 G Sbjct: 779 G 779 >ref|YP_001890645.1| putative CheA signal transduction histidine kinase [Burkholderia phytofirmans PsJN] gb|ACD21274.1| putative CheA signal transduction histidine kinase [Burkholderia phytofirmans PsJN] Length = 796 Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/795 (59%), Positives = 594/795 (74%), Gaps = 5/795 (0%) Query: 1 MTIRMRITLLVILTFIAIAGIGGYAMYQSRSSAVEVRSVTEGVMPSVLASADLMGQLKDV 60 MTIR RITLLV+L F+A++ IGGYA+YQ+R SA EVR VTEGV+PS LASADL+ Q+KDV Sbjct: 1 MTIRHRITLLVVLMFVALSAIGGYAVYQTRGSAAEVRKVTEGVVPSALASADLVSQVKDV 60 Query: 61 QLAAMVMVTENDNQLVAQENEKLAEKKAVLEKALAAQAQQAEGVAQRGLIEQAKESLDNY 120 QLA M +V D +VAQ ++L +K+A L++ALA QA+ A AQ+GL+ QA +SL+NY Sbjct: 61 QLATMTLVYAPDANMVAQAQDELKKKRASLQQALALQAKDAASHAQKGLVAQANDSLENY 120 Query: 121 FGAIDTTAKFKLAGKNEIAQAQFFGGVMQYQTELEGIVNTLRIEKNRFKDNAIASLNGKL 180 F AI TAK K GKNE+AQA F V QY+ ELEGIV TLR+EKNR KD AI++LN L Sbjct: 121 FSAIAETAKMKADGKNELAQAYLFANVAQYRDELEGIVETLRVEKNREKDEAISALNTTL 180 Query: 181 AQTTTTISIVTVMAVLLLGGIGFLLYRQITGPISRMAAMMGEIATSQDFTRRLPVQRMDE 240 + TTT I+ VT +A++LL IG LLYRQIT P+SRM AMM EIA+SQDFTRR+PV R+DE Sbjct: 181 STTTTAIAAVTGIAIILLTSIGSLLYRQITRPLSRMQAMMSEIASSQDFTRRVPVGRLDE 240 Query: 241 VGHSIVAFNGMVEKIEEASAQVRQKTADMQAMLQNIPQGILTIVEGNRIHPEYSAFLETV 300 +GHSIVAFNGM+EKI+E+SAQ++QKTAD+QAMLQN+ QGILT+++G IH EYSA+LE + Sbjct: 241 IGHSIVAFNGMIEKIQESSAQLKQKTADIQAMLQNMQQGILTVIDGAVIHAEYSAYLEDI 300 Query: 301 FETTDIAGRDVMELVFADTQLGADTLSQIEAIGGACIGEDVMNFEFNAHLMVGEIEKTMA 360 FET DIAGR +M+LVFADT LG+D LSQ++A AC+GED +NF FN HL+VGEI K M Sbjct: 301 FETKDIAGRGLMDLVFADTDLGSDALSQVDAATHACLGEDCINFAFNQHLLVGEISKRMP 360 Query: 361 DGSKKILDLSWSPITDEADTVIRLMLCVRDVTELRQLAAEANEQKRELEMIGEILAVTPA 420 DG KILDLSWS ITDE D + RLMLCVRDVTELR+LAAEA+EQ+R L+MIGEILAV+ Sbjct: 361 DGRVKILDLSWSAITDENDVIQRLMLCVRDVTELRKLAAEASEQRRRLDMIGEILAVSEE 420 Query: 421 KFAEFISSARRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLANVVHHT 480 KF FI S+ F+ ENE+I+ ++ EA AIA+LFRNMHTIKGN RTY L HL NVVH T Sbjct: 421 KFHHFIESSAGFISENERIIRKHSEADHAAIAELFRNMHTIKGNARTYNLQHLTNVVHET 480 Query: 481 EQHYDDLRHPASGAVWRQEELLRQLAQVREIIDRYARINDVTLGRGVAAAGEQTLPGYAR 540 EQ Y +LR P + W QE L+ +L +VRE I+ YA+IN+ +LGR + + Sbjct: 481 EQSYHELRQPDADRSWDQEHLMSELTRVREAIESYAKINEQSLGR--KNKNQTNTAANSA 538 Query: 541 HVITIDRKHIEQSLERLENVNTANLHELVAVRNDVRRTLRLLGTETIQEVLAPVTDSLPA 600 H + + +HI+ +L LE N LHEL ++R+ +RRTLR LG+E++++ L+ V DSLP+ Sbjct: 539 HYVMVANEHIQHTLSMLEQTNAGELHELQSMRDALRRTLRALGSESVRDALSGVLDSLPS 598 Query: 601 LAADLGKAAPVVQIEDNGYVVHSFAVPLLQNVFMHLIRNAMDHGLESSEERLAKGKPEAG 660 LA++LGK AP V+I+DNGY + A L NVFMHL+RN+MDHG+E++E R A GK AG Sbjct: 599 LASELGKPAPNVRIDDNGYRLRGQAGGTLNNVFMHLLRNSMDHGIETAEARSALGKVPAG 658 Query: 661 VIKLEMGVMEDMFQMALSDDGRGLALERVRQIGIEKHLITVDQALSDAEIARLILQPGFS 720 I +E+GV Q+ LSDDGRGLALER+R I +E+ I D LSD IA I +PGFS Sbjct: 659 TIDIEVGVDNGALQITLSDDGRGLALERIRGIAMERGWIGHDDTLSDEAIADFIFRPGFS 718 Query: 721 TRSEVTEVSGRGVGMDAVLDFVTREHGQIEIRFTDTEEGAPFRSFQIIVMLPENVAVEVD 780 T VTE+SGRGVGMDAV DF+ R +G IE+RFTD +GA FR FQ IV LP+NVAV+ Sbjct: 719 TAETVTELSGRGVGMDAVRDFLKRANGSIELRFTDDRKGAAFRQFQTIVCLPDNVAVDTL 778 Query: 781 GIDVPYPMGGQETLQ 795 G++ G TLQ Sbjct: 779 GVEARREAG---TLQ 790 >ref|YP_552336.1| CheA signal transduction histidine kinases (STHK) [Burkholderia xenovorans LB400] gb|ABE32986.1| CheA signal transduction histidine kinases (STHK) [Burkholderia xenovorans LB400] Length = 796 Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/783 (59%), Positives = 594/783 (75%), Gaps = 2/783 (0%) Query: 1 MTIRMRITLLVILTFIAIAGIGGYAMYQSRSSAVEVRSVTEGVMPSVLASADLMGQLKDV 60 MTIR RITLLV+L F+A++ IGGYA+YQ+R SA EVR VTEGV+PS LASADL+ Q+KDV Sbjct: 1 MTIRHRITLLVVLMFVALSAIGGYAVYQTRGSAGEVRKVTEGVVPSALASADLVSQVKDV 60 Query: 61 QLAAMVMVTENDNQLVAQENEKLAEKKAVLEKALAAQAQQAEGVAQRGLIEQAKESLDNY 120 QLA M +V D +VAQ ++L +K+A L++ALA Q + A AQ+GL+ QA +SL NY Sbjct: 61 QLATMTLVYAPDANMVAQAQDELNKKRASLQQALALQDKDAASHAQKGLVSQANDSLQNY 120 Query: 121 FGAIDTTAKFKLAGKNEIAQAQFFGGVMQYQTELEGIVNTLRIEKNRFKDNAIASLNGKL 180 F AI TAK K GKNE+AQA F V QY+ ELEGIV TLR+EKNR KD AI +LN L Sbjct: 121 FSAIAETAKMKAEGKNELAQAYLFANVAQYRDELEGIVETLRVEKNREKDEAITTLNATL 180 Query: 181 AQTTTTISIVTVMAVLLLGGIGFLLYRQITGPISRMAAMMGEIATSQDFTRRLPVQRMDE 240 A TTT I+ VT +A++LL IG LLYRQIT P+SRM AMM EIA+SQDFTRR+PV R+DE Sbjct: 181 ATTTTAIAAVTGIAIILLTFIGALLYRQITRPLSRMQAMMSEIASSQDFTRRVPVGRLDE 240 Query: 241 VGHSIVAFNGMVEKIEEASAQVRQKTADMQAMLQNIPQGILTIVEGNRIHPEYSAFLETV 300 +GHSIVAFNGM+EKI+E+SAQ++QKTAD+QAMLQN+ QGILT+++G IH EYSA+LE + Sbjct: 241 IGHSIVAFNGMIEKIQESSAQLKQKTADIQAMLQNMQQGILTVIDGAVIHAEYSAYLEDI 300 Query: 301 FETTDIAGRDVMELVFADTQLGADTLSQIEAIGGACIGEDVMNFEFNAHLMVGEIEKTMA 360 FET DIAGR +M+LVFADT +G+D LSQ++A AC+GED +NF FN HL+VGEI K M Sbjct: 301 FETKDIAGRGLMDLVFADTDIGSDALSQVDAAVHACLGEDCINFAFNQHLLVGEISKRMP 360 Query: 361 DGSKKILDLSWSPITDEADTVIRLMLCVRDVTELRQLAAEANEQKRELEMIGEILAVTPA 420 DG KILDLSWS ITDE D ++RLMLCVRDVTELR+LAAEA+EQ+R L+MIGEILAV+ Sbjct: 361 DGRVKILDLSWSAITDENDVIVRLMLCVRDVTELRKLAAEASEQRRRLDMIGEILAVSEE 420 Query: 421 KFAEFISSARRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLANVVHHT 480 KF FI S+ F+ ENE+I+ ++ A AIA+LFRNMHTIKGN RTY L HL NVVH T Sbjct: 421 KFHHFIESSAGFISENERIIRKHSAADHAAIAELFRNMHTIKGNARTYNLQHLTNVVHET 480 Query: 481 EQHYDDLRHPASGAVWRQEELLRQLAQVREIIDRYARINDVTLGRGVAAAGEQTLPGYAR 540 EQ Y +LR P +G W QE L+R+L +VRE I+ YA+IN+ +LGR + G+ G + Sbjct: 481 EQSYHELRQPDAGRSWDQEHLMRELTRVREAIESYAKINEQSLGR--KSKGQANEAGNSG 538 Query: 541 HVITIDRKHIEQSLERLENVNTANLHELVAVRNDVRRTLRLLGTETIQEVLAPVTDSLPA 600 H + + R+HI+ +L LE N L EL ++R+ +RRTLR LG+E++++ L+ V DSLP+ Sbjct: 539 HYVMVAREHIQHTLSMLEQTNAGELQELQSMRDALRRTLRALGSESVRDALSGVLDSLPS 598 Query: 601 LAADLGKAAPVVQIEDNGYVVHSFAVPLLQNVFMHLIRNAMDHGLESSEERLAKGKPEAG 660 LA++LGK AP V+IEDNGY + A L NVFMHL+RN+MDHG+E++E R A GK AG Sbjct: 599 LASELGKPAPSVRIEDNGYRLRGEAGGTLNNVFMHLLRNSMDHGIETAETRSAHGKAPAG 658 Query: 661 VIKLEMGVMEDMFQMALSDDGRGLALERVRQIGIEKHLITVDQALSDAEIARLILQPGFS 720 I++E+G+ Q+ LSDDGRGLALER+R I +E+ I D LSD IA I +PGFS Sbjct: 659 SIRIEVGLDSGALQITLSDDGRGLALERIRGIAMERGWIGPDDTLSDEAIADFIFRPGFS 718 Query: 721 TRSEVTEVSGRGVGMDAVLDFVTREHGQIEIRFTDTEEGAPFRSFQIIVMLPENVAVEVD 780 T VTE+SGRGVGMDAV DF+ R +G IE+RFTD ++GA +R FQ IV LP+++AV+ Sbjct: 719 TAETVTELSGRGVGMDAVRDFLKRANGSIELRFTDDQKGAAYRQFQTIVCLPDSIAVDTL 778 Query: 781 GID 783 G++ Sbjct: 779 GVE 781 >ref|ZP_06841438.1| CheA signal transduction histidine kinase [Burkholderia sp. Ch1-1] gb|EFG70964.1| CheA signal transduction histidine kinase [Burkholderia sp. Ch1-1] Length = 796 Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust. Identities = 465/783 (59%), Positives = 592/783 (75%), Gaps = 2/783 (0%) Query: 1 MTIRMRITLLVILTFIAIAGIGGYAMYQSRSSAVEVRSVTEGVMPSVLASADLMGQLKDV 60 MTIR RITLLV+L F+A++ IGGYA+YQ+R SA EVR VTEGV+PS LASADL+ Q+KDV Sbjct: 1 MTIRHRITLLVVLMFVALSAIGGYAVYQTRGSAGEVRKVTEGVVPSALASADLVSQVKDV 60 Query: 61 QLAAMVMVTENDNQLVAQENEKLAEKKAVLEKALAAQAQQAEGVAQRGLIEQAKESLDNY 120 QLA M +V D +VAQ ++L +K+A L++ALA Q + A AQ+GL+ QA +SL NY Sbjct: 61 QLATMTLVYAPDANMVAQAQDELNKKRASLQQALALQDKDAASHAQKGLVSQANDSLQNY 120 Query: 121 FGAIDTTAKFKLAGKNEIAQAQFFGGVMQYQTELEGIVNTLRIEKNRFKDNAIASLNGKL 180 F AI TAK K GKNE+AQA F V QY+ ELEGIV TLR+EKNR KD AI +LN L Sbjct: 121 FSAIAETAKMKAEGKNELAQAYLFANVAQYRDELEGIVETLRVEKNREKDEAITTLNATL 180 Query: 181 AQTTTTISIVTVMAVLLLGGIGFLLYRQITGPISRMAAMMGEIATSQDFTRRLPVQRMDE 240 A TTT I+ VT +A++LL IG LLYRQIT P+SRM AMM EIA+SQDFTRR+PV R+DE Sbjct: 181 ATTTTAIAAVTGIAIILLTFIGALLYRQITRPLSRMQAMMSEIASSQDFTRRVPVGRLDE 240 Query: 241 VGHSIVAFNGMVEKIEEASAQVRQKTADMQAMLQNIPQGILTIVEGNRIHPEYSAFLETV 300 +GHSIVAFNGM+EKI+E+SAQ++QKTAD+QAMLQN+ QGILT+++G IH EYSA+LE + Sbjct: 241 IGHSIVAFNGMIEKIQESSAQLKQKTADIQAMLQNMQQGILTVIDGAVIHAEYSAYLEDI 300 Query: 301 FETTDIAGRDVMELVFADTQLGADTLSQIEAIGGACIGEDVMNFEFNAHLMVGEIEKTMA 360 FET DIAGR +M+LVFADT +G+D LSQ++A AC+GED +NF FN HL+VGEI K M Sbjct: 301 FETKDIAGRGLMDLVFADTDIGSDALSQVDAAVHACLGEDCINFAFNQHLLVGEISKRMP 360 Query: 361 DGSKKILDLSWSPITDEADTVIRLMLCVRDVTELRQLAAEANEQKRELEMIGEILAVTPA 420 DG KILDLSWS ITDE D ++RLMLCVRDVTELR+LAAEA+EQ+R L+MIGEILAV+ Sbjct: 361 DGRVKILDLSWSAITDENDVIVRLMLCVRDVTELRKLAAEASEQRRRLDMIGEILAVSEE 420 Query: 421 KFAEFISSARRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLANVVHHT 480 KF FI S+ F+ ENE+I+ ++ A AIA+LFRNMHTIKGN RTY L HL NVVH T Sbjct: 421 KFHHFIESSAGFISENERIIRKHSAADHAAIAELFRNMHTIKGNARTYNLQHLTNVVHET 480 Query: 481 EQHYDDLRHPASGAVWRQEELLRQLAQVREIIDRYARINDVTLGRGVAAAGEQTLPGYAR 540 EQ Y +LR P +G W QE L+R+L +VRE I+ YA+IN+ +LGR G+ G + Sbjct: 481 EQSYHELRQPDAGRSWDQEHLMRELTRVREAIESYAKINEQSLGR--KGKGQANEAGNSG 538 Query: 541 HVITIDRKHIEQSLERLENVNTANLHELVAVRNDVRRTLRLLGTETIQEVLAPVTDSLPA 600 H + + R+HI+ +L LE N L EL ++R+ +RRTLR LG+E++++ L+ V DSLP+ Sbjct: 539 HYVMVAREHIQHTLSMLEQTNAGELQELQSMRDALRRTLRALGSESVRDALSGVLDSLPS 598 Query: 601 LAADLGKAAPVVQIEDNGYVVHSFAVPLLQNVFMHLIRNAMDHGLESSEERLAKGKPEAG 660 LA++LGK AP V+I+DNGY + A L NVFMHL+RN+MDHG+E++E R A GK AG Sbjct: 599 LASELGKPAPSVRIDDNGYRLRGEAGGTLNNVFMHLLRNSMDHGIETAETRSAHGKAPAG 658 Query: 661 VIKLEMGVMEDMFQMALSDDGRGLALERVRQIGIEKHLITVDQALSDAEIARLILQPGFS 720 I++E+G+ Q+ LSDDGRGLALER+R I E+ I D LSD IA I +PGFS Sbjct: 659 SIRIEVGLDSGALQITLSDDGRGLALERIRGIATERGWIGPDDTLSDEAIADFIFRPGFS 718 Query: 721 TRSEVTEVSGRGVGMDAVLDFVTREHGQIEIRFTDTEEGAPFRSFQIIVMLPENVAVEVD 780 T VTE+SGRGVGMDAV DF+ R +G IE+RFTD ++GA +R FQ IV LP+++AV+ Sbjct: 719 TAETVTELSGRGVGMDAVRDFLKRANGSIELRFTDDQKGAAYRQFQTIVCLPDSIAVDTL 778 Query: 781 GID 783 G++ Sbjct: 779 GVE 781 >ref|YP_001859775.1| putative CheA signal transduction histidine kinase [Burkholderia phymatum STM815] gb|ACC72729.1| putative CheA signal transduction histidine kinase [Burkholderia phymatum STM815] Length = 796 Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/781 (59%), Positives = 583/781 (74%), Gaps = 5/781 (0%) Query: 1 MTIRMRITLLVILTFIAIAGIGGYAMYQSRSSAVEVRSVTEGVMPSVLASADLMGQLKDV 60 MTIR RITLLV+L +A++ IGGYA+YQ+R SA +V+ VT+GV+PS LASADL+ Q+KDV Sbjct: 1 MTIRHRITLLVVLMLVALSAIGGYAVYQTRGSAADVKQVTQGVVPSALASADLVSQVKDV 60 Query: 61 QLAAMVMVTENDNQLVAQENEKLAEKKAVLEKALAAQAQQAEGVAQRGLIEQAKESLDNY 120 QLA M +V D LV Q ++LA K+ L AL QA+ A AQ GL+ QA++SL NY Sbjct: 61 QLATMTLVYAPDANLVEQAQKELAAKQKSLGAALDMQAKAAASHAQEGLVTQARDSLANY 120 Query: 121 FGAIDTTAKFKLAGKNEIAQAQFFGGVMQYQTELEGIVNTLRIEKNRFKDNAIASLNGKL 180 F AI+ TAK K GKN++AQA F V QY+ ELEGIV TLRIEKNR KD AI +LN L Sbjct: 121 FSAINDTAKMKAEGKNDLAQAYLFANVAQYRDELEGIVETLRIEKNRQKDEAIDALNTGL 180 Query: 181 AQTTTTISIVTVMAVLLLGGIGFLLYRQITGPISRMAAMMGEIATSQDFTRRLPVQRMDE 240 A TTT I + A+L+L IG LLYRQIT P+SRM MM EIA+SQDFTRR+PV RMDE Sbjct: 181 ATTTTAIGSASGAAILVLIAIGLLLYRQITRPLSRMQEMMSEIASSQDFTRRVPVGRMDE 240 Query: 241 VGHSIVAFNGMVEKIEEASAQVRQKTADMQAMLQNIPQGILTIVEGNRIHPEYSAFLETV 300 +GHSIVAFNGM+EKI+++SAQ++QKTAD+QAMLQN+ QGILT+V+G IH EYSA+LE + Sbjct: 241 IGHSIVAFNGMIEKIQQSSAQLKQKTADIQAMLQNMQQGILTVVDGAVIHSEYSAYLEAI 300 Query: 301 FETTDIAGRDVMELVFADTQLGADTLSQIEAIGGACIGEDVMNFEFNAHLMVGEIEKTMA 360 FET DIA R +M+LVFA + LG+DT+SQ+EA AC+GED +NFEFN HL+V E+ +TM Sbjct: 301 FETKDIANRPLMDLVFAGSDLGSDTVSQVEAAVLACLGEDSINFEFNQHLLVNELTRTMP 360 Query: 361 DGSKKILDLSWSPITDEADTVIRLMLCVRDVTELRQLAAEANEQKRELEMIGEILAVTPA 420 DG +K LD+SWS ITDE+DTV+RLMLCVRDVTELR+LAAEA EQKR LEMIGEILAV Sbjct: 361 DGREKTLDVSWSAITDESDTVMRLMLCVRDVTELRRLAAEAGEQKRRLEMIGEILAVNEE 420 Query: 421 KFAEFISSARRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLANVVHHT 480 KF F+ SA F++ENE+I+ Q+ A A+A+LFRNMHTIKGN RTY L HL ++VH T Sbjct: 421 KFHHFVDSATGFINENERIIRQHTHADGSAVAELFRNMHTIKGNARTYSLQHLTSIVHDT 480 Query: 481 EQHYDDLRHPASGAVWRQEELLRQLAQVREIIDRYARINDVTLGRGVAAAGEQTLPGYAR 540 EQ YD LR P S W QE L+ +LA+V+E + YA IN+V+LGR A A Sbjct: 481 EQRYDALRRPESAHEWDQEVLMAELARVKEALQHYATINEVSLGRRKAGRVHS-----AE 535 Query: 541 HVITIDRKHIEQSLERLENVNTANLHELVAVRNDVRRTLRLLGTETIQEVLAPVTDSLPA 600 + +DR HI++SL L+ N A++ +L+ R+ VRRTLRLLGTE +++ LA V SLP+ Sbjct: 536 RYLVVDRDHIQESLRLLDAANPADMRDLLRARDAVRRTLRLLGTEKLEDALAGVLQSLPS 595 Query: 601 LAADLGKAAPVVQIEDNGYVVHSFAVPLLQNVFMHLIRNAMDHGLESSEERLAKGKPEAG 660 LAA+LGK AP V+I+DNGY V S A L+NVFMHL+RNA+DHG+ES E+R+A GKP+AG Sbjct: 596 LAAELGKVAPQVRIDDNGYRVRSQAGATLKNVFMHLLRNAVDHGIESIEQRIAFGKPQAG 655 Query: 661 VIKLEMGVMEDMFQMALSDDGRGLALERVRQIGIEKHLITVDQALSDAEIARLILQPGFS 720 VI++E+GV E Q+ LSDDGRGLAL R+R I ++ + D +SD IA I +PGFS Sbjct: 656 VIEIEVGVAEGALQITLSDDGRGLALSRIRGIAADRGWLQPDSQMSDEAIAEFIFRPGFS 715 Query: 721 TRSEVTEVSGRGVGMDAVLDFVTREHGQIEIRFTDTEEGAPFRSFQIIVMLPENVAVEVD 780 T VTEVSGRGVGMDAV DF+ RE G+IE+RFTD GA FR FQ IV LPEN AV+ Sbjct: 716 TAQNVTEVSGRGVGMDAVRDFIRREGGRIELRFTDDRAGADFRQFQTIVYLPENCAVDSV 775 Query: 781 G 781 G Sbjct: 776 G 776 >ref|YP_001893345.1| chemotaxis protein CheA [Ralstonia pickettii 12J] ref|YP_002983688.1| CheA signal transduction histidine kinase [Ralstonia pickettii 12D] gb|ACD29918.1| putative CheA signal transduction histidine kinase [Ralstonia pickettii 12J] gb|ACS65016.1| CheA signal transduction histidine kinase [Ralstonia pickettii 12D] Length = 794 Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/782 (59%), Positives = 584/782 (74%), Gaps = 13/782 (1%) Query: 1 MTIRMRITLLVILTFIAIAGIGGYAMYQSRSSAVEVRSVTEGVMPSVLASADLMGQLKDV 60 MTIR RITLLV+L F+A+A IGGYA++Q+R SA+EVR VTEGV+PS LASADL+ +KDV Sbjct: 1 MTIRHRITLLVVLMFVALAAIGGYAVHQTRGSAMEVRQVTEGVVPSALASADLVSLVKDV 60 Query: 61 QLAAMVMVTENDNQLVAQENEKLAEKKAVLEKALAAQAQQAEGVAQRGLIEQAKESLDNY 120 QLA MV+V D+ +V Q + L K+A L AL QA+ A G AQ GL+ QAKES+D+Y Sbjct: 61 QLATMVLVYAPDDNIVTQAKQDLKAKEAALRAALDVQAKGANGHAQEGLVTQAKESVDSY 120 Query: 121 FGAIDTTAKFKLAGKNEIAQAQFFGGVMQYQTELEGIVNTLRIEKNRFKDNAIASLNGKL 180 AI+ T KLAGKNE+AQA F V Y+ LE IV TLRIEKNR KD AI +LNGKL Sbjct: 121 VEAIEQTTDMKLAGKNELAQAFLFANVASYRDVLEKIVETLRIEKNREKDGAITALNGKL 180 Query: 181 AQTTTTISIVTVMAVLLLGGIGFLLYRQITGPISRMAAMMGEIATSQDFTRRLPVQRMDE 240 A TTT I +V+ +A+++L IG LLYRQIT P++RM A M EIATSQDFTRR+PV RMDE Sbjct: 181 ATTTTAIGVVSGVAIVVLTAIGMLLYRQITRPLTRMQAEMSEIATSQDFTRRVPVGRMDE 240 Query: 241 VGHSIVAFNGMVEKIEEASAQVRQKTADMQAMLQNIPQGILTIVEGNRIHPEYSAFLETV 300 +G S+VAFN M+EKI+E SA ++QKTAD+QAMLQN+ QGILT+V+G+R+H EYS +LE++ Sbjct: 241 IGRSVVAFNQMIEKIQENSALLKQKTADIQAMLQNMQQGILTVVDGSRVHEEYSIYLESI 300 Query: 301 FETTDIAGRDVMELVFADTQLGADTLSQIEAIGGACIGEDVMNFEFNAHLMVGEIEKTMA 360 FET DIAGR +MELVFADT LGAD LSQ+EA AC+G+DV+NF FN HL+V E+EK M Sbjct: 301 FETQDIAGRGLMELVFADTALGADALSQVEAAVDACLGQDVINFAFNQHLLVSEVEKRMP 360 Query: 361 DGSKKILDLSWSPITDEADTVIRLMLCVRDVTELRQLAAEANEQKRELEMIGEILAVTPA 420 DG K LDLSWS ITDE+DT++RLMLCVRDVTELR+LAAEA+EQ+R LE+IGEILAV+ Sbjct: 361 DGRVKTLDLSWSAITDESDTILRLMLCVRDVTELRKLAAEASEQRRNLEIIGEILAVSQE 420 Query: 421 KFAEFISSARRFLDENEQIVHQNPEATAFAIAKLFRNMHTIKGNGRTYGLLHLANVVHHT 480 KF FI S+ F+ ENE+I+ Q EA AIA LFRNMHTIKGN RTY L +L NVVH T Sbjct: 421 KFQHFIDSSTTFVHENERIIRQYSEADNAAIAALFRNMHTIKGNARTYNLQYLTNVVHET 480 Query: 481 EQHYDDLRHPASGAVWRQEELLRQLAQVREIIDRYARINDVTLGRG---VAAAGEQ-TLP 536 EQ Y LR P S W Q+ L+++L +VRE I+ YARIN+V LGR +A AGEQ T Sbjct: 481 EQTYHALREPGSEHTWDQDWLMQELTRVREAIESYARINEVKLGRKSTPMAGAGEQPTSD 540 Query: 537 GYARHVITIDRKHIEQSLERLENVNTANLHELVAVRNDVRRTLRLLGTETIQEVLAPVTD 596 R I+Q L LE+ N A++HELV++R+ V + LRLLG+E ++++L+ V Sbjct: 541 ALVR---------IQQCLRLLESANPASVHELVSMRDAVYQRLRLLGSERVEDMLSGVLQ 591 Query: 597 SLPALAADLGKAAPVVQIEDNGYVVHSFAVPLLQNVFMHLIRNAMDHGLESSEERLAKGK 656 SLP+LA +LGKA + I DNGY + + +LQNVF HL+RNA+DHG+E+++ R+A GK Sbjct: 592 SLPSLAQELGKAPVTLCIGDNGYRIRTEVRDVLQNVFTHLLRNAIDHGIETADVRIAHGK 651 Query: 657 PEAGVIKLEMGVMEDMFQMALSDDGRGLALERVRQIGIEKHLITVDQALSDAEIARLILQ 716 P AGVI +E+GV + M Q+ L DDGRGLAL+R+R I +E+ I + D EIA+ I + Sbjct: 652 PAAGVIDMEVGVDQGMLQITLCDDGRGLALDRIRSIAVERGWIGAAERPGDEEIAQYIFR 711 Query: 717 PGFSTRSEVTEVSGRGVGMDAVLDFVTREHGQIEIRFTDTEEGAPFRSFQIIVMLPENVA 776 PGFST +VTEVSGRGVGMDAV++F+ RE G+I +RFTD +GA FR FQ +V LPE A Sbjct: 712 PGFSTADKVTEVSGRGVGMDAVVEFLKREQGRIALRFTDDRKGAAFRQFQTVVCLPERFA 771 Query: 777 VE 778 V+ Sbjct: 772 VD 773