BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0121.p         (85 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775885.1| hypothetical protein Hsero_2478 [Herbaspiril...   171   3e-41

>ref|YP_003775885.1| hypothetical protein Hsero_2478 [Herbaspirillum seropedicae SmR1]
 gb|ADJ63977.1| hypothetical protein Hsero_2478 [Herbaspirillum seropedicae SmR1]
          Length = 116

 Score =  171 bits (433), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 85/85 (100%), Positives = 85/85 (100%)

Query: 1   MQRWCLAGVVGIPLLLTFLWLQFAAARSGGDWLYADQVCGCRDVLASWVSDYVWTQMIWL 60
           MQRWCLAGVVGIPLLLTFLWLQFAAARSGGDWLYADQVCGCRDVLASWVSDYVWTQMIWL
Sbjct: 32  MQRWCLAGVVGIPLLLTFLWLQFAAARSGGDWLYADQVCGCRDVLASWVSDYVWTQMIWL 91

Query: 61  PGNTLFLLIWGALAVKLWSDKRRRR 85
           PGNTLFLLIWGALAVKLWSDKRRRR
Sbjct: 92  PGNTLFLLIWGALAVKLWSDKRRRR 116