BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0119.p (231 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775887.1| signal peptidase I (SPase I) family protein ... 466 e-129 ref|YP_004350580.1| Signal peptidase I [Burkholderia gladioli BS... 292 3e-77 ref|YP_558515.1| signal peptidase I [Burkholderia xenovorans LB4... 289 2e-76 ref|ZP_06840501.1| signal peptidase I [Burkholderia sp. Ch1-1] >... 287 7e-76 ref|YP_001895359.1| signal peptidase I [Burkholderia phytofirman... 286 1e-75 ref|YP_001857893.1| signal peptidase I [Burkholderia phymatum ST... 286 2e-75 ref|ZP_03267210.1| signal peptidase I [Burkholderia sp. H160] >g... 285 3e-75 ref|YP_002909486.1| Signal peptidase I [Burkholderia glumae BGR1... 285 4e-75 ref|ZP_02360919.1| Signal peptidase I [Burkholderia oklahomensis... 281 7e-74 ref|ZP_02466335.1| Signal peptidase I [Burkholderia thailandensi... 277 7e-73 >ref|YP_003775887.1| signal peptidase I (SPase I) family protein [Herbaspirillum seropedicae SmR1] emb|CAM32656.1| Signal peptidase I family protein [Herbaspirillum seropedicae] gb|ADJ63979.1| signal peptidase I (SPase I) family protein [Herbaspirillum seropedicae SmR1] Length = 231 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 230/231 (99%), Positives = 231/231 (100%) Query: 1 MKSTLNKLLADNKGLLAFMALMVMFRSAIADYNVVPSGSMLPTVQIGDRILVDKMAYDLR 60 MKSTLNKLLADNKGLLAF+ALMVMFRSAIADYNVVPSGSMLPTVQIGDRILVDKMAYDLR Sbjct: 1 MKSTLNKLLADNKGLLAFIALMVMFRSAIADYNVVPSGSMLPTVQIGDRILVDKMAYDLR 60 Query: 61 LPLTHISLLRLGEPQRGDIVTIDSRQAGELLVKRIVGLPGDVVELRDNVLFINGQPAHYH 120 LPLTHISLLRLGEPQRGDIVTIDSRQAGELLVKRIVGLPGDVVELRDNVLFINGQPAHYH Sbjct: 61 LPLTHISLLRLGEPQRGDIVTIDSRQAGELLVKRIVGLPGDVVELRDNVLFINGQPAHYH 120 Query: 121 PAAEAPEAGDGSDQAAYRDERYGAMEHAVRLSAAHPSLHSSYGPVVVPPGHYMMLGDNRD 180 PAAEAPEAGDGSDQAAYRDERYGAMEHAVRLSAAHPSLHSSYGPVVVPPGHYMMLGDNRD Sbjct: 121 PAAEAPEAGDGSDQAAYRDERYGAMEHAVRLSAAHPSLHSSYGPVVVPPGHYMMLGDNRD 180 Query: 181 NSMDSRYFGFFARDELMGRTRRIAFSLDAERGYRPRLERFGQLLDATPPRQ 231 NSMDSRYFGFFARDELMGRTRRIAFSLDAERGYRPRLERFGQLLDATPPRQ Sbjct: 181 NSMDSRYFGFFARDELMGRTRRIAFSLDAERGYRPRLERFGQLLDATPPRQ 231 >ref|YP_004350580.1| Signal peptidase I [Burkholderia gladioli BSR3] gb|AEA65068.1| Signal peptidase I [Burkholderia gladioli BSR3] Length = 228 Score = 292 bits (747), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 144/223 (64%), Positives = 167/223 (74%) Query: 4 TLNKLLADNKGLLAFMALMVMFRSAIADYNVVPSGSMLPTVQIGDRILVDKMAYDLRLPL 63 T+ +L NKG +AF+ LMV+FRSA+AD+NVVPSGSMLPT++IGDRILVDKMAYD+R+P Sbjct: 3 TIVRLWKANKGFIAFLFLMVIFRSAVADWNVVPSGSMLPTIRIGDRILVDKMAYDIRIPF 62 Query: 64 THISLLRLGEPQRGDIVTIDSRQAGELLVKRIVGLPGDVVELRDNVLFINGQPAHYHPAA 123 TH+ L RL EPQRGDIVTIDS A ELLVKR++GLPGD V + DNVL ING+ A Y P Sbjct: 63 THVRLARLHEPQRGDIVTIDSAAAHELLVKRLIGLPGDTVAMHDNVLTINGKRADYRPIG 122 Query: 124 EAPEAGDGSDQAAYRDERYGAMEHAVRLSAAHPSLHSSYGPVVVPPGHYMMLGDNRDNSM 183 D Y ER G H VRLS PS S+GP+VVPPG Y+MLGDNRDNS Sbjct: 123 SNLLRSDADSPGEYLAERIGGAPHTVRLSPEAPSPRESFGPIVVPPGQYLMLGDNRDNSA 182 Query: 184 DSRYFGFFARDELMGRTRRIAFSLDAERGYRPRLERFGQLLDA 226 DSRYFGFF RDE+MGR RR+AFSLD R Y PRL+RFG+ LDA Sbjct: 183 DSRYFGFFPRDEIMGRARRVAFSLDPSRDYLPRLDRFGRRLDA 225 >ref|YP_558515.1| signal peptidase I [Burkholderia xenovorans LB400] gb|ABE30463.1| signal peptidase I, Serine peptidase, MEROPS family S26A [Burkholderia xenovorans LB400] Length = 233 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 140/223 (62%), Positives = 171/223 (76%) Query: 5 LNKLLADNKGLLAFMALMVMFRSAIADYNVVPSGSMLPTVQIGDRILVDKMAYDLRLPLT 64 L KL DNK L+AF+ LMV+FRSA+AD+NVVPSGSMLPT++ GDRI VDKMAYDLR+PLT Sbjct: 4 LGKLWRDNKSLVAFLFLMVLFRSAVADWNVVPSGSMLPTIREGDRIFVDKMAYDLRVPLT 63 Query: 65 HISLLRLGEPQRGDIVTIDSRQAGELLVKRIVGLPGDVVELRDNVLFINGQPAHYHPAAE 124 HI++ L +PQRGDIVTIDS A EL+VKR++GLPGD V +R+NVL++NG A Y P Sbjct: 64 HIAIAHLHDPQRGDIVTIDSSAAHELIVKRLIGLPGDSVAMRENVLYVNGVRADYQPLKF 123 Query: 125 APEAGDGSDQAAYRDERYGAMEHAVRLSAAHPSLHSSYGPVVVPPGHYMMLGDNRDNSMD 184 P GD S Y ER+ + H VRL+ PS S+GPV+VPPG Y+MLGDNRD+S D Sbjct: 124 KPLPGDASSPGDYLTERFDGIAHIVRLAPQAPSPRDSFGPVIVPPGEYLMLGDNRDDSAD 183 Query: 185 SRYFGFFARDELMGRTRRIAFSLDAERGYRPRLERFGQLLDAT 227 SRYFGFF+R ELMGRTRR+A+SLD + Y PR ERFG LD++ Sbjct: 184 SRYFGFFSRKELMGRTRRVAYSLDPDHYYAPRFERFGARLDSS 226 >ref|ZP_06840501.1| signal peptidase I [Burkholderia sp. Ch1-1] gb|EFG71697.1| signal peptidase I [Burkholderia sp. Ch1-1] Length = 233 Score = 287 bits (735), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 140/223 (62%), Positives = 171/223 (76%) Query: 5 LNKLLADNKGLLAFMALMVMFRSAIADYNVVPSGSMLPTVQIGDRILVDKMAYDLRLPLT 64 L KL DNK L+AF+ LMV+FRSA+AD+NVVPSGSMLPT++ GDRILVDKMAYDLR+PLT Sbjct: 4 LGKLWRDNKSLVAFLFLMVLFRSAVADWNVVPSGSMLPTIREGDRILVDKMAYDLRVPLT 63 Query: 65 HISLLRLGEPQRGDIVTIDSRQAGELLVKRIVGLPGDVVELRDNVLFINGQPAHYHPAAE 124 HI++ L +PQRGDIVTIDS A EL+VKR++GLPGD V +R+NVL++NG A Y Sbjct: 64 HIAIAHLHDPQRGDIVTIDSSAAHELIVKRLIGLPGDSVAMRENVLYVNGVRADYQSLKL 123 Query: 125 APEAGDGSDQAAYRDERYGAMEHAVRLSAAHPSLHSSYGPVVVPPGHYMMLGDNRDNSMD 184 P GD + Y ER+ + H+VRL+ PS S+GPV+VPPG Y+MLGDNRD+S D Sbjct: 124 KPLPGDATSPGDYLTERFDGVAHSVRLAPQAPSPRDSFGPVIVPPGEYLMLGDNRDDSAD 183 Query: 185 SRYFGFFARDELMGRTRRIAFSLDAERGYRPRLERFGQLLDAT 227 SRYFGFF R ELMGRTRR+A+SLD + Y PR ERFG LD+T Sbjct: 184 SRYFGFFPRKELMGRTRRVAYSLDPDHYYAPRFERFGAPLDST 226 >ref|YP_001895359.1| signal peptidase I [Burkholderia phytofirmans PsJN] gb|ACD16135.1| signal peptidase I [Burkholderia phytofirmans PsJN] Length = 232 Score = 286 bits (733), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 140/222 (63%), Positives = 168/222 (75%) Query: 5 LNKLLADNKGLLAFMALMVMFRSAIADYNVVPSGSMLPTVQIGDRILVDKMAYDLRLPLT 64 L KL DNK ++AF+ LMV+FRSA+AD+NVVPSGSMLPT++ GDRI VDKMAYDLR+PLT Sbjct: 4 LGKLWRDNKSVVAFLFLMVLFRSAVADWNVVPSGSMLPTIREGDRIFVDKMAYDLRVPLT 63 Query: 65 HISLLRLGEPQRGDIVTIDSRQAGELLVKRIVGLPGDVVELRDNVLFINGQPAHYHPAAE 124 HI++ L +PQRGDIVTIDS A EL+VKR++GLPGD V +R+NVL++NG A Y P Sbjct: 64 HIAIAHLHDPQRGDIVTIDSSAAHELIVKRLIGLPGDSVAMRENVLYVNGVRADYQPLKL 123 Query: 125 APEAGDGSDQAAYRDERYGAMEHAVRLSAAHPSLHSSYGPVVVPPGHYMMLGDNRDNSMD 184 P GD + Y ER+ + H VRL+ PS S+GPVVVPPG Y+MLGDNRD+S D Sbjct: 124 KPLPGDAASPGDYLTERFDGVTHTVRLAPQAPSPRDSFGPVVVPPGEYLMLGDNRDDSAD 183 Query: 185 SRYFGFFARDELMGRTRRIAFSLDAERGYRPRLERFGQLLDA 226 SRYFGFF R ELMGRTR +AFSLD + Y PR ERFG LDA Sbjct: 184 SRYFGFFPRKELMGRTRHVAFSLDPDHYYTPRFERFGAPLDA 225 >ref|YP_001857893.1| signal peptidase I [Burkholderia phymatum STM815] gb|ACC70847.1| signal peptidase I [Burkholderia phymatum STM815] Length = 234 Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 147/231 (63%), Positives = 168/231 (72%), Gaps = 4/231 (1%) Query: 1 MKSTLNKLLADNKGLLAFMALMVMFRSAIADYNVVPSGSMLPTVQIGDRILVDKMAYDLR 60 M L +L + K L F+ LMV+FRSAIAD+NVVPSGSMLPT++ GDRILVDKMAYDLR Sbjct: 1 MMRMLARLWREYKSLATFIFLMVLFRSAIADWNVVPSGSMLPTIREGDRILVDKMAYDLR 60 Query: 61 LPLTHISLLRLGEPQRGDIVTIDSRQAGELLVKRIVGLPGDVVELRDNVLFINGQPAHYH 120 +PLTHI++ L EPQRGDIVTIDS A EL+VKR++GLPGDVV +RDNVL++NG A Y Sbjct: 61 IPLTHIAIAHLHEPQRGDIVTIDSSAARELIVKRVIGLPGDVVAMRDNVLYVNGARASYQ 120 Query: 121 PAAEAPEAGDGSDQAAYRDERYGAME----HAVRLSAAHPSLHSSYGPVVVPPGHYMMLG 176 P A AP GD Y ER HAVRLS PS S+GPV VP G Y+MLG Sbjct: 121 PLALAPLPGDAVSPGDYLTERVAGASPGSPHAVRLSELAPSPRRSFGPVTVPAGEYLMLG 180 Query: 177 DNRDNSMDSRYFGFFARDELMGRTRRIAFSLDAERGYRPRLERFGQLLDAT 227 DNRD+S DSRYFGFF R ELMGRTRR+AFSLD + YRPR ERFG LDA Sbjct: 181 DNRDDSADSRYFGFFPRAELMGRTRRVAFSLDPDHAYRPRFERFGVRLDAV 231 >ref|ZP_03267210.1| signal peptidase I [Burkholderia sp. H160] gb|EEA01237.1| signal peptidase I [Burkholderia sp. H160] Length = 228 Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 141/223 (63%), Positives = 168/223 (75%) Query: 4 TLNKLLADNKGLLAFMALMVMFRSAIADYNVVPSGSMLPTVQIGDRILVDKMAYDLRLPL 63 L+KL +NK AF+ LM +FRSA+AD+NVVPSGSMLPT++IGDRILVDKMAYDLR+P Sbjct: 3 VLSKLWKENKKFFAFLLLMTIFRSAVADWNVVPSGSMLPTIRIGDRILVDKMAYDLRVPF 62 Query: 64 THISLLRLGEPQRGDIVTIDSRQAGELLVKRIVGLPGDVVELRDNVLFINGQPAHYHPAA 123 THI L LG+P RGDIVTIDS A ELLVKR+VGLPGDVV +R+NVL+ING Y P Sbjct: 63 THIDALHLGDPLRGDIVTIDSSSAHELLVKRVVGLPGDVVAMRENVLYINGARIDYQPLD 122 Query: 124 EAPEAGDGSDQAAYRDERYGAMEHAVRLSAAHPSLHSSYGPVVVPPGHYMMLGDNRDNSM 183 P + D S++ Y ER+ H VRLS PS SS+GP+ VP G Y+MLGDNRD+S Sbjct: 123 MTPLSSDRSERGEYLAERFAQTAHVVRLSPDAPSPVSSFGPMTVPQGMYLMLGDNRDDSA 182 Query: 184 DSRYFGFFARDELMGRTRRIAFSLDAERGYRPRLERFGQLLDA 226 DSRYFGFF R+E+MGRT R+AFSLD R Y PR +RFG+ LDA Sbjct: 183 DSRYFGFFPRNEIMGRTARVAFSLDPARLYLPRFDRFGRKLDA 225 >ref|YP_002909486.1| Signal peptidase I [Burkholderia glumae BGR1] gb|ACR32251.1| Signal peptidase I [Burkholderia glumae BGR1] Length = 228 Score = 285 bits (729), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 146/220 (66%), Positives = 163/220 (74%) Query: 7 KLLADNKGLLAFMALMVMFRSAIADYNVVPSGSMLPTVQIGDRILVDKMAYDLRLPLTHI 66 +L NKG LAF+ LMV+FRSAIAD+NVVPSGSMLPT++IGDRILVDKMAYDLR+P THI Sbjct: 6 RLWKANKGFLAFLFLMVIFRSAIADWNVVPSGSMLPTIRIGDRILVDKMAYDLRVPFTHI 65 Query: 67 SLLRLGEPQRGDIVTIDSRQAGELLVKRIVGLPGDVVELRDNVLFINGQPAHYHPAAEAP 126 L RL EPQRGDIVTIDS A ELLVKR++GLPGD VELR+NVL ING A Y P Sbjct: 66 RLARLHEPQRGDIVTIDSAAAHELLVKRLIGLPGDTVELRNNVLLINGVRAAYRPVGTNL 125 Query: 127 EAGDGSDQAAYRDERYGAMEHAVRLSAAHPSLHSSYGPVVVPPGHYMMLGDNRDNSMDSR 186 D + Y ER VRLS PS S+GPVVVP G Y+MLGDNRDNS DSR Sbjct: 126 LRSDAASPGEYLAERIDGSARIVRLSPDAPSPRDSFGPVVVPKGQYLMLGDNRDNSADSR 185 Query: 187 YFGFFARDELMGRTRRIAFSLDAERGYRPRLERFGQLLDA 226 YFGFF RDE+MGR RR+AFSLD Y PRL+RFG+ LDA Sbjct: 186 YFGFFPRDEIMGRARRVAFSLDPSHDYLPRLDRFGRRLDA 225 >ref|ZP_02360919.1| Signal peptidase I [Burkholderia oklahomensis EO147] Length = 228 Score = 281 bits (718), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 135/225 (60%), Positives = 168/225 (74%) Query: 4 TLNKLLADNKGLLAFMALMVMFRSAIADYNVVPSGSMLPTVQIGDRILVDKMAYDLRLPL 63 T++KL +N+ L+AF+ M +FRSA+AD+NVVPSGSMLPT+++GDRI VDK+AYDLR+P Sbjct: 3 TVSKLWNENRKLIAFLFFMAIFRSAVADWNVVPSGSMLPTIRLGDRIFVDKIAYDLRVPF 62 Query: 64 THISLLRLGEPQRGDIVTIDSRQAGELLVKRIVGLPGDVVELRDNVLFINGQPAHYHPAA 123 THI + L +P+RGDIVT+DS A ELLVKR++GLPGDVVE+RDNVL+ING Y P Sbjct: 63 THIRVAHLSDPRRGDIVTVDSSAAHELLVKRVIGLPGDVVEMRDNVLYINGARVSYRPLG 122 Query: 124 EAPEAGDGSDQAAYRDERYGAMEHAVRLSAAHPSLHSSYGPVVVPPGHYMMLGDNRDNSM 183 P + D S + Y ER H VR S PS SS+GP VVP G Y+MLGDNRD+S Sbjct: 123 NDPLSSDASARGEYLAERLAGAAHVVRHSPDTPSPRSSFGPAVVPKGAYLMLGDNRDDSA 182 Query: 184 DSRYFGFFARDELMGRTRRIAFSLDAERGYRPRLERFGQLLDATP 228 DSRY+GFF RDE+MGRTRR+AFSLD R + PR++RFG LD P Sbjct: 183 DSRYYGFFPRDEIMGRTRRVAFSLDPSRFHMPRVDRFGARLDGAP 227 >ref|ZP_02466335.1| Signal peptidase I [Burkholderia thailandensis MSMB43] Length = 228 Score = 277 bits (709), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 134/223 (60%), Positives = 167/223 (74%) Query: 4 TLNKLLADNKGLLAFMALMVMFRSAIADYNVVPSGSMLPTVQIGDRILVDKMAYDLRLPL 63 T+ + + L+AF+ MV+FRSA+AD+NVVPSGSMLPT+++GDRI VDK+AYDLR+P Sbjct: 3 TILAWWKEYRKLIAFLFFMVVFRSAVADWNVVPSGSMLPTIRLGDRIFVDKLAYDLRVPF 62 Query: 64 THISLLRLGEPQRGDIVTIDSRQAGELLVKRIVGLPGDVVELRDNVLFINGQPAHYHPAA 123 TH+ + LG+PQRGDIVT+DS A ELLVKR++GLPGDVVE+RDNVL+I+G+ Y P Sbjct: 63 THVRVAHLGDPQRGDIVTVDSSAAHELLVKRVIGLPGDVVEMRDNVLYIDGKRVRYAPLG 122 Query: 124 EAPEAGDGSDQAAYRDERYGAMEHAVRLSAAHPSLHSSYGPVVVPPGHYMMLGDNRDNSM 183 + D + + YR ER H VRLS PS SS+GPVVVP G Y+MLGDNRD+S Sbjct: 123 ANLLSSDATARGEYRAERLAGATHVVRLSPDAPSPRSSFGPVVVPNGAYLMLGDNRDDSA 182 Query: 184 DSRYFGFFARDELMGRTRRIAFSLDAERGYRPRLERFGQLLDA 226 DSRY+GFF RDE+MGRTRR+AFSLD R Y PR+ RFG LD Sbjct: 183 DSRYYGFFPRDEIMGRTRRVAFSLDPSRFYLPRIGRFGARLDG 225