BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0104.p (732 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775899.1| light-regulated signal transduction histidin... 1492 0.0 ref|YP_001346361.1| putative bacteriophytochrome [Pseudomonas ae... 627 e-177 gb|EGM19470.1| putative bacteriophytochrome [Pseudomonas aerugin... 624 e-176 ref|YP_002438462.1| putative bacteriophytochrome [Pseudomonas ae... 624 e-176 ref|ZP_04936124.1| hypothetical protein PA2G_03568 [Pseudomonas ... 624 e-176 ref|ZP_04930327.1| hypothetical protein PACG_03030 [Pseudomonas ... 623 e-176 gb|AEO73309.1| putative bacteriophytochrome [Pseudomonas aerugin... 623 e-176 ref|NP_252806.1| bacterial phytochrome, BphP [Pseudomonas aerugi... 623 e-176 ref|YP_789005.1| putative bacteriophytochrome [Pseudomonas aerug... 622 e-176 ref|YP_004234797.1| multi-sensor signal transduction histidine k... 606 e-171 >ref|YP_003775899.1| light-regulated signal transduction histidine kinase [Herbaspirillum seropedicae SmR1] gb|ADJ63991.1| bacteriophytochrome (light-regulated signal transduction histidine kinase) protein [Herbaspirillum seropedicae SmR1] Length = 732 Score = 1492 bits (3862), Expect = 0.0, Method: Compositional matrix adjust. Identities = 732/732 (100%), Positives = 732/732 (100%) Query: 1 MSNPYHEGRHRTVDLSNCDSEPIHIPGSIQNHGALLCFAPDGALASRSANASTLLGALPE 60 MSNPYHEGRHRTVDLSNCDSEPIHIPGSIQNHGALLCFAPDGALASRSANASTLLGALPE Sbjct: 1 MSNPYHEGRHRTVDLSNCDSEPIHIPGSIQNHGALLCFAPDGALASRSANASTLLGALPE 60 Query: 61 VGQALGEAHLDASARAVIQAALEDRYGYVDARMLVLPAGVFDLVTHKSEGVLIAEFERRP 120 VGQALGEAHLDASARAVIQAALEDRYGYVDARMLVLPAGVFDLVTHKSEGVLIAEFERRP Sbjct: 61 VGQALGEAHLDASARAVIQAALEDRYGYVDARMLVLPAGVFDLVTHKSEGVLIAEFERRP 120 Query: 121 ADVAALDSFALAAHQAIQRIQRQQSVADLLSLAVDEIARITGFDRVMAYRFLHDDSGEVV 180 ADVAALDSFALAAHQAIQRIQRQQSVADLLSLAVDEIARITGFDRVMAYRFLHDDSGEVV Sbjct: 121 ADVAALDSFALAAHQAIQRIQRQQSVADLLSLAVDEIARITGFDRVMAYRFLHDDSGEVV 180 Query: 181 AEHRREDLESFLGQRYPASDIPAQARRLYVINPIRLIADVGAPTVPLQPDLNPLTGRALD 240 AEHRREDLESFLGQRYPASDIPAQARRLYVINPIRLIADVGAPTVPLQPDLNPLTGRALD Sbjct: 181 AEHRREDLESFLGQRYPASDIPAQARRLYVINPIRLIADVGAPTVPLQPDLNPLTGRALD 240 Query: 241 LSHGILRSVSPVHIEYLSNMGVGASMSLSIVIGERLWGLIACHHMSPHLVPHAVRMSCQL 300 LSHGILRSVSPVHIEYLSNMGVGASMSLSIVIGERLWGLIACHHMSPHLVPHAVRMSCQL Sbjct: 241 LSHGILRSVSPVHIEYLSNMGVGASMSLSIVIGERLWGLIACHHMSPHLVPHAVRMSCQL 300 Query: 301 LSQFVSALVERNLNGERARALDDSTALRREIVAQVTDREDLVLALSSAPESFLRLMNAHG 360 LSQFVSALVERNLNGERARALDDSTALRREIVAQVTDREDLVLALSSAPESFLRLMNAHG Sbjct: 301 LSQFVSALVERNLNGERARALDDSTALRREIVAQVTDREDLVLALSSAPESFLRLMNAHG 360 Query: 361 GAITLDRKTQVFGKAPSREGVNALINWLNEHHSADLFSTSSLGADVPDLKAAMGDICGVL 420 GAITLDRKTQVFGKAPSREGVNALINWLNEHHSADLFSTSSLGADVPDLKAAMGDICGVL Sbjct: 361 GAITLDRKTQVFGKAPSREGVNALINWLNEHHSADLFSTSSLGADVPDLKAAMGDICGVL 420 Query: 421 AVRFYREQNGYAFWFRNEQVEDVRWGGNPEKKYSIGPLGPRLTPRGSFAVWKETVRGKSL 480 AVRFYREQNGYAFWFRNEQVEDVRWGGNPEKKYSIGPLGPRLTPRGSFAVWKETVRGKSL Sbjct: 421 AVRFYREQNGYAFWFRNEQVEDVRWGGNPEKKYSIGPLGPRLTPRGSFAVWKETVRGKSL 480 Query: 481 PWEKTQTEAASQLRLDLQEVALTNENLVKRARETLLATLGHDLRDPLQAIMMAARMIEVR 540 PWEKTQTEAASQLRLDLQEVALTNENLVKRARETLLATLGHDLRDPLQAIMMAARMIEVR Sbjct: 481 PWEKTQTEAASQLRLDLQEVALTNENLVKRARETLLATLGHDLRDPLQAIMMAARMIEVR 540 Query: 541 EHSPSSSNLSKRISSSSSRMHRLISQVLDISRLQSGMGLDIQRRPVDVRKMVSEIVSEAR 600 EHSPSSSNLSKRISSSSSRMHRLISQVLDISRLQSGMGLDIQRRPVDVRKMVSEIVSEAR Sbjct: 541 EHSPSSSNLSKRISSSSSRMHRLISQVLDISRLQSGMGLDIQRRPVDVRKMVSEIVSEAR 600 Query: 601 MAYPDNEIILEAEDCGEIALDGDRISQVVSNLISNTRHHGEIGKPSTLIVFRREDVLTIA 660 MAYPDNEIILEAEDCGEIALDGDRISQVVSNLISNTRHHGEIGKPSTLIVFRREDVLTIA Sbjct: 601 MAYPDNEIILEAEDCGEIALDGDRISQVVSNLISNTRHHGEIGKPSTLIVFRREDVLTIA 660 Query: 661 VSNHGPAIPEPVRSNLFKPYKKESLGNQRNTRGLGLGLYIVSEIVHGHGGKIAVSCDNNI 720 VSNHGPAIPEPVRSNLFKPYKKESLGNQRNTRGLGLGLYIVSEIVHGHGGKIAVSCDNNI Sbjct: 661 VSNHGPAIPEPVRSNLFKPYKKESLGNQRNTRGLGLGLYIVSEIVHGHGGKIAVSCDNNI 720 Query: 721 ITFTVTLPILAD 732 ITFTVTLPILAD Sbjct: 721 ITFTVTLPILAD 732 >ref|YP_001346361.1| putative bacteriophytochrome [Pseudomonas aeruginosa PA7] gb|ABR82116.1| probable bacteriophytochrome [Pseudomonas aeruginosa PA7] Length = 728 Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust. Identities = 333/719 (46%), Positives = 454/719 (63%), Gaps = 10/719 (1%) Query: 13 VDLSNCDSEPIHIPGSIQNHGALLCFAPDGALASRSANASTLLGALPEVGQALGEAHLDA 72 V L+NC+ EPIH+PG+IQ HGALL DG + + S N LLG + G L E + A Sbjct: 7 VTLANCEDEPIHVPGAIQPHGALLALRADGMVLAASENIQALLGFVAAPGSYLQEQQVGA 66 Query: 73 SARAVIQAALEDRYGYVDARMLVLPAGVFDLVTHKSEGVLIAEFERRPADVAALDSFALA 132 +++ L + ++ + +FD++ H + V EFE R D ++ SF L Sbjct: 67 EVLRMLEDGLLGGGPWANSVETRIGEHLFDVIGHSYKDVFYLEFEVRTTDTLSITSFTLN 126 Query: 133 AHQAIQRIQRQQSVADLLSLAVDEIARITGFDRVMAYRFLHDDSGEVVAEHRREDLESFL 192 A + I ++Q A LLS +E+ R+TG+DRVMAYRF HDDSGEVVAE RR+DLES+L Sbjct: 127 AQRIIAQVQLHNDTATLLSSVTEELRRMTGYDRVMAYRFRHDDSGEVVAESRRDDLESYL 186 Query: 193 GQRYPASDIPAQARRLYVINPIRLIADVGAPTVPLQPDLNPLTGRALDLSHGILRSVSPV 252 GQRYPASDIPAQARRLY+ NPIRLIADV + + P LNP +G + DLS+ +LRSVSP+ Sbjct: 187 GQRYPASDIPAQARRLYIQNPIRLIADVAYIPMRVLPTLNPESGGSFDLSYSVLRSVSPI 246 Query: 253 HIEYLSNMGVGASMSLSIVIGERLWGLIACHHMSPHLVPHAVRMSCQLLSQFVSALVERN 312 H EYL+NMGV ASMS+SIV+G +LWGL +CHHMSP L+P+ VRMS Q+ SQ SA+V+R Sbjct: 247 HCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIPYPVRMSFQIFSQVCSAIVDRL 306 Query: 313 LNGERARALDDSTALRREIVAQVTDREDLVLALSSAPESFLRLMNAHGGAITLDRKTQVF 372 G A L ST R +V + D +DL AL+ + L+ G + L +T Sbjct: 307 EQGRIAELLRVSTERRLALVRRARDADDLFGALAHPDDGIAGLIPCDGALVMLGGRTLSI 366 Query: 373 GKAPSREGVNALINWLNEHHSADLFSTSSL---GADVPDLKAAMGDICGVLAVRFYREQN 429 R+ N L L D++ T + AD PD GD CGVLA+RF+R+++ Sbjct: 367 RGDFERQAGNVL-QRLQRDPEQDIYHTDNWPQPSADSPD----GGDCCGVLAIRFHRQES 421 Query: 430 GYAFWFRNEQVEDVRWGGNPEKKYSIGPLGPRLTPRGSFAVWKETVRGKSLPWEKTQTEA 489 G+ FWFR+E+V +RWGG PEK SIGP GPRLTPRGSF W+E VRG S PW +T Sbjct: 422 GWIFWFRHEEVHRIRWGGKPEKLLSIGPSGPRLTPRGSFEAWEEVVRGHSTPWSETDLAI 481 Query: 490 ASQLRLDLQEVALTNENLVKRARETLLATLGHDLRDPLQAIMMAARMIEVREHSPSSSNL 549 A +LRLDL E+ L + + R R+ L+A LGHDLR+PLQ+I MAA ++ + ++ L Sbjct: 482 AEKLRLDLMELCLNHAAEIDRMRQRLIAVLGHDLRNPLQSISMAAALLSSSD--TRTTEL 539 Query: 550 SKRISSSSSRMHRLISQVLDISRLQSGMGLDIQRRPVDVRKMVSEIVSEARMAYPDNEII 609 + IS+SSSRM RL+SQ+LD+SRLQSG+GL + DV ++V +IV E +AYP I Sbjct: 540 RQHISASSSRMERLVSQILDMSRLQSGIGLTVAPVDTDVSQLVRQIVCETDVAYPGLVIE 599 Query: 610 LEAEDCGEIALDGDRISQVVSNLISNTRHHGEIGKPSTLIVFRREDVLTIAVSNHGPAIP 669 + + +D DR +QV +NL+SN RHHG G+P + + R+ D + ++V N + Sbjct: 600 VAIDPQVRAVVDPDRYAQVAANLLSNARHHGLPGRPVLVTLTRQGDEVCLSVLNETSGLS 659 Query: 670 EPVRSNLFKPYKKESLGNQRNTRGLGLGLYIVSEIVHGHGGKIAVSCDNNIITFTVTLP 728 + +NLF+P+K+ES NQRN GLG+GLYI I H G+I V C +++I+F + LP Sbjct: 660 KAQLANLFEPFKRESADNQRNRNGLGIGLYISQAIAQAHRGRIEVDCQDDVISFCLRLP 718 >gb|EGM19470.1| putative bacteriophytochrome [Pseudomonas aeruginosa 152504] Length = 728 Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust. Identities = 335/720 (46%), Positives = 452/720 (62%), Gaps = 10/720 (1%) Query: 13 VDLSNCDSEPIHIPGSIQNHGALLCFAPDGALASRSANASTLLGALPEVGQALGEAHLDA 72 V L+NC+ EPIH+PG+IQ HGAL+ DG + + S N LLG + G L + + Sbjct: 7 VTLANCEDEPIHVPGAIQPHGALIALRADGMVLAASENIQALLGFVASPGSYLTQEQVGP 66 Query: 73 SARAVIQAALEDRYGYVDARMLVLPAGVFDLVTHKSEGVLIAEFERRPADVAALDSFALA 132 +++ L + ++ + +FD++ H + V EFE R AD ++ SF L Sbjct: 67 EVLRMLEEGLTGNGPWSNSVETRIGEHLFDVIGHSYKEVFYLEFEIRTADTLSITSFTLN 126 Query: 133 AHQAIQRIQRQQSVADLLSLAVDEIARITGFDRVMAYRFLHDDSGEVVAEHRREDLESFL 192 A + I ++Q A LLS DE+ RITG+DRVMAYRF HDDSGEVVAE RREDLES+L Sbjct: 127 AQRIIAQVQLHNDTASLLSNVTDELRRITGYDRVMAYRFRHDDSGEVVAESRREDLESYL 186 Query: 193 GQRYPASDIPAQARRLYVINPIRLIADVGAPTVPLQPDLNPLTGRALDLSHGILRSVSPV 252 GQRYPASDIPAQARRLY+ NPIRLIADV + + P LNP T + DLS+ +LRSVSP+ Sbjct: 187 GQRYPASDIPAQARRLYIQNPIRLIADVAYTPMRVFPALNPETNESFDLSYSVLRSVSPI 246 Query: 253 HIEYLSNMGVGASMSLSIVIGERLWGLIACHHMSPHLVPHAVRMSCQLLSQFVSALVERN 312 H EYL+NMGV ASMS+SIV+G +LWGL +CHHMSP L+P+ VRMS Q+ SQ SA+VER Sbjct: 247 HCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIPYPVRMSFQIFSQVCSAIVERL 306 Query: 313 LNGERARALDDSTALRREIVAQVTDREDLVLALSSAPESFLRLMNAHGGAITLDRKTQVF 372 G A L ST R + + D +DL AL+ + L+ G + L +T Sbjct: 307 EQGRIAELLRVSTERRLALARRARDADDLFGALAHPDDGIAALIPCDGALVMLGGRTLSI 366 Query: 373 GKAPSREGVNALINWLNEHHSADLFSTSSL---GADVPDLKAAMGDICGVLAVRFYREQN 429 R+ N L L D++ T + D PD GD CGVLA+RF+R+++ Sbjct: 367 RGDFERQAGNVL-QRLQRDPERDIYHTDNWPQPSEDSPD----GGDCCGVLAIRFHRQES 421 Query: 430 GYAFWFRNEQVEDVRWGGNPEKKYSIGPLGPRLTPRGSFAVWKETVRGKSLPWEKTQTEA 489 G+ FWFR+E+V +RWGG PEK +IGP GPRLTPRGSF W+E VRG S PW +T Sbjct: 422 GWIFWFRHEEVHRIRWGGKPEKLLTIGPSGPRLTPRGSFEAWEEVVRGHSTPWSETDLAI 481 Query: 490 ASQLRLDLQEVALTNENLVKRARETLLATLGHDLRDPLQAIMMAARMIEVREHSPSSSNL 549 A +LRLDL E+ L + V R R+ L+A LGHDLR+PLQ+I MAA ++ + ++ L Sbjct: 482 AEKLRLDLMELCLNHAAEVDRMRQRLIAVLGHDLRNPLQSISMAAALLSSSD--TRTTEL 539 Query: 550 SKRISSSSSRMHRLISQVLDISRLQSGMGLDIQRRPVDVRKMVSEIVSEARMAYPDNEII 609 + IS+SSSRM RL+SQ+LD+SRLQSG+GL + DV ++V +IV E +AYP I Sbjct: 540 RQHISASSSRMERLVSQILDMSRLQSGIGLTVNPVDTDVSQLVQQIVCETDVAYPGLVIE 599 Query: 610 LEAEDCGEIALDGDRISQVVSNLISNTRHHGEIGKPSTLIVFRREDVLTIAVSNHGPAIP 669 + + +D DR +QV +NL+SN RHHG G+P + + R+ D + ++V N + Sbjct: 600 IAIDPQVRAVVDPDRYAQVAANLLSNARHHGLPGRPVLVTLTRQGDEVCLSVLNETSGLS 659 Query: 670 EPVRSNLFKPYKKESLGNQRNTRGLGLGLYIVSEIVHGHGGKIAVSCDNNIITFTVTLPI 729 E +NLF+P+K+ES NQRN GLG+GLYI I H G+I V C +++ITF + LP+ Sbjct: 660 EAQLANLFEPFKRESADNQRNRNGLGIGLYISQAIAQAHQGRIDVDCRDDVITFCLRLPV 719 >ref|YP_002438462.1| putative bacteriophytochrome [Pseudomonas aeruginosa LESB58] emb|CAW25581.1| probable bacteriophytochrome [Pseudomonas aeruginosa LESB58] Length = 728 Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust. Identities = 334/720 (46%), Positives = 452/720 (62%), Gaps = 10/720 (1%) Query: 13 VDLSNCDSEPIHIPGSIQNHGALLCFAPDGALASRSANASTLLGALPEVGQALGEAHLDA 72 V L+NC+ EPIH+PG+IQ HGAL+ DG + + S N LLG + G L + + Sbjct: 7 VTLANCEDEPIHVPGAIQPHGALIALRADGMVLAASENIQALLGFVASPGSYLTQEQVGP 66 Query: 73 SARAVIQAALEDRYGYVDARMLVLPAGVFDLVTHKSEGVLIAEFERRPADVAALDSFALA 132 +++ L + ++ + +FD++ H + V EFE R AD ++ SF L Sbjct: 67 EVLRMLEEGLTGNGPWSNSVETRIGEHLFDVIGHSYKEVFYLEFEIRTADTLSITSFTLN 126 Query: 133 AHQAIQRIQRQQSVADLLSLAVDEIARITGFDRVMAYRFLHDDSGEVVAEHRREDLESFL 192 A + I ++Q A LLS DE+ R+TG+DRVMAYRF HDDSGEVVAE RREDLES+L Sbjct: 127 AQRIIAQVQLHNDTASLLSNVTDELRRMTGYDRVMAYRFRHDDSGEVVAESRREDLESYL 186 Query: 193 GQRYPASDIPAQARRLYVINPIRLIADVGAPTVPLQPDLNPLTGRALDLSHGILRSVSPV 252 GQRYPASDIPAQARRLY+ NPIRLIADV + + P LNP T + DLS+ +LRSVSP+ Sbjct: 187 GQRYPASDIPAQARRLYIQNPIRLIADVAYTPMRVFPALNPETNESFDLSYSVLRSVSPI 246 Query: 253 HIEYLSNMGVGASMSLSIVIGERLWGLIACHHMSPHLVPHAVRMSCQLLSQFVSALVERN 312 H EYL+NMGV ASMS+SIV+G +LWGL +CHHMSP L+P+ VRMS Q+ SQ SA+VER Sbjct: 247 HCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIPYPVRMSFQIFSQVCSAIVERL 306 Query: 313 LNGERARALDDSTALRREIVAQVTDREDLVLALSSAPESFLRLMNAHGGAITLDRKTQVF 372 G A L ST R + + D +DL AL+ + L+ G + L +T Sbjct: 307 EQGRIAELLRVSTERRLALARRARDADDLFGALAHPDDGIAALIPCDGALVMLGGRTLSI 366 Query: 373 GKAPSREGVNALINWLNEHHSADLFSTSSL---GADVPDLKAAMGDICGVLAVRFYREQN 429 R+ N L L D++ T + D PD GD CGVLA+RF+R+++ Sbjct: 367 RGDFERQAGNVL-QRLQRDPERDIYHTDNWPQPSVDSPD----GGDCCGVLAIRFHRQES 421 Query: 430 GYAFWFRNEQVEDVRWGGNPEKKYSIGPLGPRLTPRGSFAVWKETVRGKSLPWEKTQTEA 489 G+ FWFR+E+V +RWGG PEK +IGP GPRLTPRGSF W+E VRG S PW +T Sbjct: 422 GWIFWFRHEEVHRIRWGGKPEKLLTIGPSGPRLTPRGSFEAWEEVVRGHSTPWSETDLAI 481 Query: 490 ASQLRLDLQEVALTNENLVKRARETLLATLGHDLRDPLQAIMMAARMIEVREHSPSSSNL 549 A +LRLDL E+ L + V R R+ L+A LGHDLR+PLQ+I MAA ++ + ++ L Sbjct: 482 AEKLRLDLMELCLNHAAEVDRMRQRLIAVLGHDLRNPLQSISMAAALLSSSD--TRTTEL 539 Query: 550 SKRISSSSSRMHRLISQVLDISRLQSGMGLDIQRRPVDVRKMVSEIVSEARMAYPDNEII 609 + IS+SSSRM RL+SQ+LD+SRLQSG+GL + DV ++V +IV E +AYP I Sbjct: 540 RQHISASSSRMERLVSQILDMSRLQSGIGLTVNPVDTDVSQLVQQIVCETDVAYPGLVIE 599 Query: 610 LEAEDCGEIALDGDRISQVVSNLISNTRHHGEIGKPSTLIVFRREDVLTIAVSNHGPAIP 669 + + +D DR +QV +NL+SN RHHG G+P + + R+ D + ++V N + Sbjct: 600 IAIDPQVRAVVDPDRYAQVAANLLSNARHHGLPGRPVLVTLTRQGDEVCLSVLNETSGLS 659 Query: 670 EPVRSNLFKPYKKESLGNQRNTRGLGLGLYIVSEIVHGHGGKIAVSCDNNIITFTVTLPI 729 E +NLF+P+K+ES NQRN GLG+GLYI I H G+I V C +++ITF + LP+ Sbjct: 660 EAQLANLFEPFKRESADNQRNRNGLGIGLYISQAIAQAHQGRIDVDCRDDVITFCLRLPV 719 >ref|ZP_04936124.1| hypothetical protein PA2G_03568 [Pseudomonas aeruginosa 2192] ref|ZP_06876826.1| putative bacteriophytochrome [Pseudomonas aeruginosa PAb1] ref|ZP_07795512.1| putative bacteriophytochrome [Pseudomonas aeruginosa 39016] gb|EAZ60243.1| hypothetical protein PA2G_03568 [Pseudomonas aeruginosa 2192] gb|EFQ40608.1| putative bacteriophytochrome [Pseudomonas aeruginosa 39016] dbj|BAK92139.1| putative bacteriophytochrome [Pseudomonas aeruginosa NCGM2.S1] Length = 728 Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust. Identities = 334/720 (46%), Positives = 452/720 (62%), Gaps = 10/720 (1%) Query: 13 VDLSNCDSEPIHIPGSIQNHGALLCFAPDGALASRSANASTLLGALPEVGQALGEAHLDA 72 V L+NC+ EPIH+PG+IQ HGAL+ DG + + S N LLG + G L + + Sbjct: 7 VTLANCEDEPIHVPGAIQPHGALIALRADGMVLAASENIQALLGFVASPGSYLTQEQVGP 66 Query: 73 SARAVIQAALEDRYGYVDARMLVLPAGVFDLVTHKSEGVLIAEFERRPADVAALDSFALA 132 +++ L + ++ + +FD++ H + V EFE R AD ++ SF L Sbjct: 67 EVLRMLEEGLTGNGPWSNSVETRIGEHLFDVIGHSYKEVFYLEFEIRTADTLSITSFTLN 126 Query: 133 AHQAIQRIQRQQSVADLLSLAVDEIARITGFDRVMAYRFLHDDSGEVVAEHRREDLESFL 192 A + I ++Q A LLS DE+ R+TG+DRVMAYRF HDDSGEVVAE RREDLES+L Sbjct: 127 AQRIIAQVQLHNDTASLLSNVTDELRRMTGYDRVMAYRFRHDDSGEVVAESRREDLESYL 186 Query: 193 GQRYPASDIPAQARRLYVINPIRLIADVGAPTVPLQPDLNPLTGRALDLSHGILRSVSPV 252 GQRYPASDIPAQARRLY+ NPIRLIADV + + P LNP T + DLS+ +LRSVSP+ Sbjct: 187 GQRYPASDIPAQARRLYIQNPIRLIADVAYTPMRVFPALNPETNESFDLSYSVLRSVSPI 246 Query: 253 HIEYLSNMGVGASMSLSIVIGERLWGLIACHHMSPHLVPHAVRMSCQLLSQFVSALVERN 312 H EYL+NMGV ASMS+SIV+G +LWGL +CHHMSP L+P+ VRMS Q+ SQ SA+VER Sbjct: 247 HCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIPYPVRMSFQIFSQVCSAIVERL 306 Query: 313 LNGERARALDDSTALRREIVAQVTDREDLVLALSSAPESFLRLMNAHGGAITLDRKTQVF 372 G A L ST R + + D +DL AL+ + L+ G + L +T Sbjct: 307 EQGRIAELLRVSTERRLALARRARDADDLFGALAHPDDGIAALIPCDGALVMLGGRTLSI 366 Query: 373 GKAPSREGVNALINWLNEHHSADLFSTSSL---GADVPDLKAAMGDICGVLAVRFYREQN 429 R+ N L L D++ T + D PD GD CGVLA+RF+R+++ Sbjct: 367 RGDFERQAGNVL-QRLQRDPERDIYHTDNWPQPSEDSPD----GGDCCGVLAIRFHRQES 421 Query: 430 GYAFWFRNEQVEDVRWGGNPEKKYSIGPLGPRLTPRGSFAVWKETVRGKSLPWEKTQTEA 489 G+ FWFR+E+V +RWGG PEK +IGP GPRLTPRGSF W+E VRG S PW +T Sbjct: 422 GWIFWFRHEEVHRIRWGGKPEKLLTIGPSGPRLTPRGSFEAWEEVVRGHSTPWSETDLAI 481 Query: 490 ASQLRLDLQEVALTNENLVKRARETLLATLGHDLRDPLQAIMMAARMIEVREHSPSSSNL 549 A +LRLDL E+ L + V R R+ L+A LGHDLR+PLQ+I MAA ++ + ++ L Sbjct: 482 AEKLRLDLMELCLNHAAEVDRMRQRLIAVLGHDLRNPLQSISMAAALLSSSD--TRTTEL 539 Query: 550 SKRISSSSSRMHRLISQVLDISRLQSGMGLDIQRRPVDVRKMVSEIVSEARMAYPDNEII 609 + IS+SSSRM RL+SQ+LD+SRLQSG+GL + DV ++V +IV E +AYP I Sbjct: 540 RQHISASSSRMERLVSQILDMSRLQSGIGLTVNPVDTDVSQLVQQIVCETDVAYPGLVIE 599 Query: 610 LEAEDCGEIALDGDRISQVVSNLISNTRHHGEIGKPSTLIVFRREDVLTIAVSNHGPAIP 669 + + +D DR +QV +NL+SN RHHG G+P + + R+ D + ++V N + Sbjct: 600 IAIDPQVRAVVDPDRYAQVAANLLSNARHHGLPGRPVLVTLTRQGDEVCLSVLNETSGLS 659 Query: 670 EPVRSNLFKPYKKESLGNQRNTRGLGLGLYIVSEIVHGHGGKIAVSCDNNIITFTVTLPI 729 E +NLF+P+K+ES NQRN GLG+GLYI I H G+I V C +++ITF + LP+ Sbjct: 660 EAQLANLFEPFKRESADNQRNRNGLGIGLYISQAIAQAHQGRIDVDCRDDVITFCLRLPV 719 >ref|ZP_04930327.1| hypothetical protein PACG_03030 [Pseudomonas aeruginosa C3719] gb|EAZ54446.1| hypothetical protein PACG_03030 [Pseudomonas aeruginosa C3719] Length = 728 Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust. Identities = 334/720 (46%), Positives = 452/720 (62%), Gaps = 10/720 (1%) Query: 13 VDLSNCDSEPIHIPGSIQNHGALLCFAPDGALASRSANASTLLGALPEVGQALGEAHLDA 72 V L+NC+ EPIH+PG+IQ HGAL+ DG + + S N LLG + G L + + Sbjct: 7 VTLANCEDEPIHVPGAIQPHGALVTLRADGMVLAASENIQALLGFVASPGSYLTQEQVGP 66 Query: 73 SARAVIQAALEDRYGYVDARMLVLPAGVFDLVTHKSEGVLIAEFERRPADVAALDSFALA 132 +++ L + ++ + +FD++ H + V EFE R AD ++ SF L Sbjct: 67 EVLRMLEEGLTGNGPWSNSVETRIGEHLFDVIGHSYKEVFYLEFEIRTADTLSITSFTLN 126 Query: 133 AHQAIQRIQRQQSVADLLSLAVDEIARITGFDRVMAYRFLHDDSGEVVAEHRREDLESFL 192 A + I ++Q A LLS DE+ R+TG+DRVMAYRF HDDSGEVVAE RREDLES+L Sbjct: 127 AQRIIAQVQLHNDTASLLSNVTDELRRMTGYDRVMAYRFRHDDSGEVVAESRREDLESYL 186 Query: 193 GQRYPASDIPAQARRLYVINPIRLIADVGAPTVPLQPDLNPLTGRALDLSHGILRSVSPV 252 GQRYPASDIPAQARRLY+ NPIRLIADV + + P LNP T + DLS+ +LRSVSP+ Sbjct: 187 GQRYPASDIPAQARRLYIQNPIRLIADVAYTPMRVFPALNPETNESFDLSYSVLRSVSPI 246 Query: 253 HIEYLSNMGVGASMSLSIVIGERLWGLIACHHMSPHLVPHAVRMSCQLLSQFVSALVERN 312 H EYL+NMGV ASMS+SIV+G +LWGL +CHHMSP L+P+ VRMS Q+ SQ SA+VER Sbjct: 247 HCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIPYPVRMSFQIFSQVCSAIVERL 306 Query: 313 LNGERARALDDSTALRREIVAQVTDREDLVLALSSAPESFLRLMNAHGGAITLDRKTQVF 372 G A L ST R + + D +DL AL+ + L+ G + L +T Sbjct: 307 EQGRIAELLRVSTERRLALARRARDADDLFGALAHPDDGIAALIPCDGALVMLGGRTLSI 366 Query: 373 GKAPSREGVNALINWLNEHHSADLFSTSSL---GADVPDLKAAMGDICGVLAVRFYREQN 429 R+ N L L D++ T + D PD GD CGVLA+RF+R+++ Sbjct: 367 RGDFERQAGNVL-QRLQRDPERDIYHTDNWPQPSVDSPD----GGDCCGVLAIRFHRQES 421 Query: 430 GYAFWFRNEQVEDVRWGGNPEKKYSIGPLGPRLTPRGSFAVWKETVRGKSLPWEKTQTEA 489 G+ FWFR+E+V +RWGG PEK +IGP GPRLTPRGSF W+E VRG S PW +T Sbjct: 422 GWIFWFRHEEVHRIRWGGKPEKLLTIGPSGPRLTPRGSFEAWEEVVRGHSTPWSETDLAI 481 Query: 490 ASQLRLDLQEVALTNENLVKRARETLLATLGHDLRDPLQAIMMAARMIEVREHSPSSSNL 549 A +LRLDL E+ L + V R R+ L+A LGHDLR+PLQ+I MAA ++ + ++ L Sbjct: 482 AEKLRLDLMELCLNHAAEVDRMRQRLIAVLGHDLRNPLQSISMAAALLSSSD--TRTTEL 539 Query: 550 SKRISSSSSRMHRLISQVLDISRLQSGMGLDIQRRPVDVRKMVSEIVSEARMAYPDNEII 609 + IS+SSSRM RL+SQ+LD+SRLQSG+GL + DV ++V +IV E +AYP I Sbjct: 540 RQHISASSSRMERLVSQILDMSRLQSGIGLTVNPVDTDVSQLVRQIVCETDVAYPGLVIE 599 Query: 610 LEAEDCGEIALDGDRISQVVSNLISNTRHHGEIGKPSTLIVFRREDVLTIAVSNHGPAIP 669 + + +D DR +QV +NL+SN RHHG G+P + + R+ D + ++V N + Sbjct: 600 IAIDPQVRAVVDPDRYAQVAANLLSNARHHGLPGRPVLVTLTRQGDEVCLSVLNETSGLS 659 Query: 670 EPVRSNLFKPYKKESLGNQRNTRGLGLGLYIVSEIVHGHGGKIAVSCDNNIITFTVTLPI 729 E +NLF+P+K+ES NQRN GLG+GLYI I H G+I V C +++ITF + LP+ Sbjct: 660 EAQLANLFEPFKRESADNQRNRNGLGIGLYISQAIAQAHQGRIDVDCRDDVITFCLRLPV 719 >gb|AEO73309.1| putative bacteriophytochrome [Pseudomonas aeruginosa M18] Length = 728 Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust. Identities = 334/720 (46%), Positives = 452/720 (62%), Gaps = 10/720 (1%) Query: 13 VDLSNCDSEPIHIPGSIQNHGALLCFAPDGALASRSANASTLLGALPEVGQALGEAHLDA 72 V L+NC+ EPIH+PG+IQ HGAL+ DG + + S N LLG + G L + + Sbjct: 7 VTLANCEDEPIHVPGAIQPHGALIALRADGMVLAASENIQALLGFVASPGSYLTQEQVGP 66 Query: 73 SARAVIQAALEDRYGYVDARMLVLPAGVFDLVTHKSEGVLIAEFERRPADVAALDSFALA 132 +++ L + ++ + +FD++ H + V EFE R AD ++ SF L Sbjct: 67 EVLRMLEEGLTGNGPWSNSVETRIGEHLFDVIGHSYKEVFYLEFEIRTADTLSITSFTLN 126 Query: 133 AHQAIQRIQRQQSVADLLSLAVDEIARITGFDRVMAYRFLHDDSGEVVAEHRREDLESFL 192 A + I ++Q A LLS DE+ R+TG+DRVMAYRF HDDSGEVVAE RREDLES+L Sbjct: 127 AQRIIAQVQLHNDTASLLSNVTDELRRMTGYDRVMAYRFRHDDSGEVVAESRREDLESYL 186 Query: 193 GQRYPASDIPAQARRLYVINPIRLIADVGAPTVPLQPDLNPLTGRALDLSHGILRSVSPV 252 GQRYPASDIPAQARRLY+ NPIRLIADV + + P LNP T + DLS+ +LRSVSP+ Sbjct: 187 GQRYPASDIPAQARRLYIQNPIRLIADVAYTPMRVFPALNPETNESFDLSYSVLRSVSPI 246 Query: 253 HIEYLSNMGVGASMSLSIVIGERLWGLIACHHMSPHLVPHAVRMSCQLLSQFVSALVERN 312 H EYL+NMGV ASMS+SIV+G +LWGL +CHHMSP L+P+ VRMS Q+ SQ SA+VER Sbjct: 247 HCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIPYPVRMSFQIFSQVCSAIVERL 306 Query: 313 LNGERARALDDSTALRREIVAQVTDREDLVLALSSAPESFLRLMNAHGGAITLDRKTQVF 372 G A L ST R + + D +DL AL+ + L+ G + L +T Sbjct: 307 EQGRIAELLRVSTERRLALARRARDADDLFGALAHPDDGIAALIPCDGALVMLGGRTLSI 366 Query: 373 GKAPSREGVNALINWLNEHHSADLFSTSSL---GADVPDLKAAMGDICGVLAVRFYREQN 429 R+ N L L D++ T + D PD GD CGVLA+RF+R+++ Sbjct: 367 RGDFERQAGNVL-QRLQRDPERDIYHTDNWPQPSEDSPD----GGDCCGVLAIRFHRQES 421 Query: 430 GYAFWFRNEQVEDVRWGGNPEKKYSIGPLGPRLTPRGSFAVWKETVRGKSLPWEKTQTEA 489 G+ FWFR+E+V +RWGG PEK +IGP GPRLTPRGSF W+E VRG S PW +T Sbjct: 422 GWIFWFRHEEVHRIRWGGKPEKLLTIGPSGPRLTPRGSFEAWEEVVRGHSTPWSETDLAI 481 Query: 490 ASQLRLDLQEVALTNENLVKRARETLLATLGHDLRDPLQAIMMAARMIEVREHSPSSSNL 549 A +LRLDL E+ L + V R R+ L+A LGHDLR+PLQ+I MAA ++ + ++ L Sbjct: 482 AEKLRLDLMELCLNHAAEVDRMRQRLIAVLGHDLRNPLQSISMAAALLSSSD--TRTTEL 539 Query: 550 SKRISSSSSRMHRLISQVLDISRLQSGMGLDIQRRPVDVRKMVSEIVSEARMAYPDNEII 609 + IS+SSSRM RL+SQ+LD+SRLQSG+GL + DV ++V +IV E +AYP I Sbjct: 540 RQHISASSSRMERLVSQILDMSRLQSGIGLTVNPVDTDVSQLVRQIVCETDVAYPGLVIE 599 Query: 610 LEAEDCGEIALDGDRISQVVSNLISNTRHHGEIGKPSTLIVFRREDVLTIAVSNHGPAIP 669 + + +D DR +QV +NL+SN RHHG G+P + + R+ D + ++V N + Sbjct: 600 IAIDPQVRAVVDPDRYAQVAANLLSNARHHGLPGRPVLVTLTRQGDEVCLSVLNETSGLS 659 Query: 670 EPVRSNLFKPYKKESLGNQRNTRGLGLGLYIVSEIVHGHGGKIAVSCDNNIITFTVTLPI 729 E +NLF+P+K+ES NQRN GLG+GLYI I H G+I V C +++ITF + LP+ Sbjct: 660 EAQLANLFEPFKRESADNQRNRNGLGIGLYISQAIAQAHQGRIDVDCRDDVITFCLRLPV 719 >ref|NP_252806.1| bacterial phytochrome, BphP [Pseudomonas aeruginosa PAO1] ref|ZP_01367552.1| hypothetical protein PaerPA_01004704 [Pseudomonas aeruginosa PACS2] sp|Q9HWR3.1|BPHY_PSEAE RecName: Full=Bacteriophytochrome; AltName: Full=Phytochrome-like protein gb|AAG07504.1|AE004828_5 bacterial phytochrome, BphP [Pseudomonas aeruginosa PAO1] gb|EGM19131.1| bacterial phytochrome, BphP [Pseudomonas aeruginosa 138244] dbj|GAA15327.1| probable bacteriophytochrome [Pseudomonas aeruginosa NCMG1179] Length = 728 Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust. Identities = 334/720 (46%), Positives = 452/720 (62%), Gaps = 10/720 (1%) Query: 13 VDLSNCDSEPIHIPGSIQNHGALLCFAPDGALASRSANASTLLGALPEVGQALGEAHLDA 72 V L+NC+ EPIH+PG+IQ HGAL+ DG + + S N LLG + G L + + Sbjct: 7 VTLANCEDEPIHVPGAIQPHGALVTLRADGMVLAASENIQALLGFVASPGSYLTQEQVGP 66 Query: 73 SARAVIQAALEDRYGYVDARMLVLPAGVFDLVTHKSEGVLIAEFERRPADVAALDSFALA 132 +++ L + ++ + +FD++ H + V EFE R AD ++ SF L Sbjct: 67 EVLRMLEEGLTGNGPWSNSVETRIGEHLFDVIGHSYKEVFYLEFEIRTADTLSITSFTLN 126 Query: 133 AHQAIQRIQRQQSVADLLSLAVDEIARITGFDRVMAYRFLHDDSGEVVAEHRREDLESFL 192 A + I ++Q A LLS DE+ R+TG+DRVMAYRF HDDSGEVVAE RREDLES+L Sbjct: 127 AQRIIAQVQLHNDTASLLSNVTDELRRMTGYDRVMAYRFRHDDSGEVVAESRREDLESYL 186 Query: 193 GQRYPASDIPAQARRLYVINPIRLIADVGAPTVPLQPDLNPLTGRALDLSHGILRSVSPV 252 GQRYPASDIPAQARRLY+ NPIRLIADV + + P LNP T + DLS+ +LRSVSP+ Sbjct: 187 GQRYPASDIPAQARRLYIQNPIRLIADVAYTPMRVFPALNPETNESFDLSYSVLRSVSPI 246 Query: 253 HIEYLSNMGVGASMSLSIVIGERLWGLIACHHMSPHLVPHAVRMSCQLLSQFVSALVERN 312 H EYL+NMGV ASMS+SIV+G +LWGL +CHHMSP L+P+ VRMS Q+ SQ SA+VER Sbjct: 247 HCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIPYPVRMSFQIFSQVCSAIVERL 306 Query: 313 LNGERARALDDSTALRREIVAQVTDREDLVLALSSAPESFLRLMNAHGGAITLDRKTQVF 372 G A L ST R + + D +DL AL+ + L+ G + L +T Sbjct: 307 EQGRIAELLRVSTERRLALARRARDADDLFGALAHPDDGIAALIPCDGALVMLGGRTLSI 366 Query: 373 GKAPSREGVNALINWLNEHHSADLFSTSSL---GADVPDLKAAMGDICGVLAVRFYREQN 429 R+ N L L D++ T + D PD GD CGVLA+RF+R+++ Sbjct: 367 RGDFERQAGNVL-QRLQRDPERDIYHTDNWPQPSEDSPD----GGDCCGVLAIRFHRQES 421 Query: 430 GYAFWFRNEQVEDVRWGGNPEKKYSIGPLGPRLTPRGSFAVWKETVRGKSLPWEKTQTEA 489 G+ FWFR+E+V +RWGG PEK +IGP GPRLTPRGSF W+E VRG S PW +T Sbjct: 422 GWIFWFRHEEVHRIRWGGKPEKLLTIGPSGPRLTPRGSFEAWEEVVRGHSTPWSETDLAI 481 Query: 490 ASQLRLDLQEVALTNENLVKRARETLLATLGHDLRDPLQAIMMAARMIEVREHSPSSSNL 549 A +LRLDL E+ L + V R R+ L+A LGHDLR+PLQ+I MAA ++ + ++ L Sbjct: 482 AEKLRLDLMELCLNHAAEVDRMRQRLIAVLGHDLRNPLQSISMAAALLSSSD--TRTTEL 539 Query: 550 SKRISSSSSRMHRLISQVLDISRLQSGMGLDIQRRPVDVRKMVSEIVSEARMAYPDNEII 609 + IS+SSSRM RL+SQ+LD+SRLQSG+GL + DV ++V +IV E +AYP I Sbjct: 540 RQHISASSSRMERLVSQILDMSRLQSGIGLTVNPVDTDVSQLVRQIVCETDVAYPGLVIE 599 Query: 610 LEAEDCGEIALDGDRISQVVSNLISNTRHHGEIGKPSTLIVFRREDVLTIAVSNHGPAIP 669 + + +D DR +QV +NL+SN RHHG G+P + + R+ D + ++V N + Sbjct: 600 IAIDPQVRAVVDPDRYAQVAANLLSNARHHGLPGRPVLVTLTRQGDEVCLSVLNETSGLS 659 Query: 670 EPVRSNLFKPYKKESLGNQRNTRGLGLGLYIVSEIVHGHGGKIAVSCDNNIITFTVTLPI 729 E +NLF+P+K+ES NQRN GLG+GLYI I H G+I V C +++ITF + LP+ Sbjct: 660 EAQLANLFEPFKRESADNQRNRNGLGIGLYISQAIAQAHQGRIDVDCRDDVITFCLRLPV 719 >ref|YP_789005.1| putative bacteriophytochrome [Pseudomonas aeruginosa UCBPP-PA14] gb|ABJ13387.1| putative bacteriophytochrome [Pseudomonas aeruginosa UCBPP-PA14] Length = 728 Score = 622 bits (1604), Expect = e-176, Method: Compositional matrix adjust. Identities = 334/720 (46%), Positives = 451/720 (62%), Gaps = 10/720 (1%) Query: 13 VDLSNCDSEPIHIPGSIQNHGALLCFAPDGALASRSANASTLLGALPEVGQALGEAHLDA 72 V L+NC+ EPIH+PG+IQ HGAL+ DG + + S N LLG + G L + Sbjct: 7 VTLANCEDEPIHVPGAIQPHGALIALRADGMVLAASENIQALLGFVASPGSYLTPEQVGP 66 Query: 73 SARAVIQAALEDRYGYVDARMLVLPAGVFDLVTHKSEGVLIAEFERRPADVAALDSFALA 132 +++ L + ++ + +FD++ H + V EFE R AD ++ SF L Sbjct: 67 EVLRMLEEGLTGNGPWSNSVETRIGEHLFDVIGHSYKEVFYLEFEIRTADTLSITSFTLN 126 Query: 133 AHQAIQRIQRQQSVADLLSLAVDEIARITGFDRVMAYRFLHDDSGEVVAEHRREDLESFL 192 A + I ++Q A LLS DE+ R+TG+DRVMAYRF HDDSGEVVAE RREDLES+L Sbjct: 127 AQRIIAQVQLHNDTASLLSNVTDELRRMTGYDRVMAYRFRHDDSGEVVAESRREDLESYL 186 Query: 193 GQRYPASDIPAQARRLYVINPIRLIADVGAPTVPLQPDLNPLTGRALDLSHGILRSVSPV 252 GQRYPASDIPAQARRLY+ NPIRLIADV + + P LNP T + DLS+ +LRSVSP+ Sbjct: 187 GQRYPASDIPAQARRLYIQNPIRLIADVAYTPMRVFPALNPETNESFDLSYSVLRSVSPI 246 Query: 253 HIEYLSNMGVGASMSLSIVIGERLWGLIACHHMSPHLVPHAVRMSCQLLSQFVSALVERN 312 H EYL+NMGV ASMS+SIV+G +LWGL +CHHMSP L+P+ VRMS Q+ SQ SA+VER Sbjct: 247 HCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIPYPVRMSFQIFSQVCSAIVERL 306 Query: 313 LNGERARALDDSTALRREIVAQVTDREDLVLALSSAPESFLRLMNAHGGAITLDRKTQVF 372 G A L ST R + + D +DL AL+ + L+ G + L +T Sbjct: 307 EQGRIAELLRVSTERRLALARRARDADDLFGALAHPDDGIAALIPCDGALVMLGGRTLSI 366 Query: 373 GKAPSREGVNALINWLNEHHSADLFSTSSL---GADVPDLKAAMGDICGVLAVRFYREQN 429 R+ N L L D++ T + D PD GD CGVLA+RF+R+++ Sbjct: 367 RGDFERQAGNVL-QRLQRDPERDIYHTDNWPQPSEDSPD----GGDCCGVLAIRFHRQES 421 Query: 430 GYAFWFRNEQVEDVRWGGNPEKKYSIGPLGPRLTPRGSFAVWKETVRGKSLPWEKTQTEA 489 G+ FWFR+E+V +RWGG PEK +IGP GPRLTPRGSF W+E VRG S PW +T Sbjct: 422 GWIFWFRHEEVHRIRWGGKPEKLLTIGPSGPRLTPRGSFEAWEEVVRGHSTPWSETDLAI 481 Query: 490 ASQLRLDLQEVALTNENLVKRARETLLATLGHDLRDPLQAIMMAARMIEVREHSPSSSNL 549 A +LRLDL E+ L + V R R+ L+A LGHDLR+PLQ+I MAA ++ + ++ L Sbjct: 482 AEKLRLDLMELCLNHAAEVDRMRQRLIAVLGHDLRNPLQSISMAAALLSSSD--TRTTEL 539 Query: 550 SKRISSSSSRMHRLISQVLDISRLQSGMGLDIQRRPVDVRKMVSEIVSEARMAYPDNEII 609 + IS+SSSRM RL+SQ+LD+SRLQSG+GL + DV ++V +IV E +AYP I Sbjct: 540 RQHISASSSRMERLVSQILDMSRLQSGIGLTVNPVDTDVSQLVQQIVCETDVAYPGLVIE 599 Query: 610 LEAEDCGEIALDGDRISQVVSNLISNTRHHGEIGKPSTLIVFRREDVLTIAVSNHGPAIP 669 + + +D DR +QV +NL+SN RHHG G+P + + R+ D + ++V N + Sbjct: 600 IAIDPQVRAVVDPDRYAQVAANLLSNARHHGLPGRPVLVTLTRQGDEVCLSVLNETSGLS 659 Query: 670 EPVRSNLFKPYKKESLGNQRNTRGLGLGLYIVSEIVHGHGGKIAVSCDNNIITFTVTLPI 729 E +NLF+P+K+ES NQRN GLG+GLYI I H G+I V C +++ITF + LP+ Sbjct: 660 EAQLANLFEPFKRESADNQRNRNGLGIGLYISQAIAQAHQGRIDVDCRDDVITFCLRLPV 719 >ref|YP_004234797.1| multi-sensor signal transduction histidine kinase [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX46230.1| multi-sensor signal transduction histidine kinase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 745 Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust. Identities = 340/740 (45%), Positives = 454/740 (61%), Gaps = 17/740 (2%) Query: 1 MSNPYHEGRHRTVDLSNCDSEPIHIPGSIQNHGALLCFAPDGALASRSANASTLLGALPE 60 M+ P H L NCD EPIHIPGSIQ+HGAL+ F DG + SANA LLG E Sbjct: 1 MTLPLHTAAPAAATLDNCDREPIHIPGSIQDHGALVAFDGDGVVRYASANAEALLGCPLE 60 Query: 61 VGQALGEAHLDASARAVIQAALEDRYGYVDARMLVLPAGV------FDLVTHKSEGVLIA 114 G L A AV E + +PA + FD+V H S+ +L+A Sbjct: 61 PGSVLDGLQPQAPCSAVADKVREGLLALHGEAEVPMPAELQVGSRQFDVVLHISDKLLVA 120 Query: 115 EFERRPADVAALDSFALAAHQAIQRIQRQQSVADLLSLAVDEIARITGFDRVMAYRFLHD 174 EFE R A L FA+ AH+A+++++R +++ DLL LA +E+ +TGFDRVMAYRF D Sbjct: 121 EFESRRHSSAELAVFAVQAHRAMEKLRRPRAIDDLLQLATEELRALTGFDRVMAYRFRPD 180 Query: 175 DSGEVVAEHRREDLESFLGQRYPASDIPAQARRLYVINPIRLIADVGAPTVPLQPDLNPL 234 SGEV AE L+ + G+RYPASDIPAQARRLYV+N +RLIADVGAP VPLQ P Sbjct: 181 GSGEVAAESCIPTLDPYRGRRYPASDIPAQARRLYVVNTLRLIADVGAPVVPLQ-QREPA 239 Query: 235 TGRALDLSHGILRSVSPVHIEYLSNMGVGASMSLSIVIGERLWGLIACHHMSPHLVPHAV 294 LDLS ILRSVSP+HIEYL+NMGV ASMS+SIVI +LWGL+ACHHM P VP++V Sbjct: 240 P---LDLSASILRSVSPIHIEYLANMGVAASMSVSIVINGQLWGLLACHHMQPRQVPYSV 296 Query: 295 RMSCQLLSQFVSALVERNLNGERARALDDSTALRREIVAQVTDREDLVLALSSAPESFLR 354 RM+C +++Q +S+ ++ +L + + + A+R ++A + +D AL+ Sbjct: 297 RMACDVIAQVLSSNIQNSLLRAQTERTEAAAAVRSRLIADILHSDDEYAALARHATELCA 356 Query: 355 LMNAHGGAITLDRKTQVFGKAPSREGVNALINWLN---EHHSAD-LFSTSSLGADVPDLK 410 ++A + K Q+FG E A++ WL E S D LF T SL + L Sbjct: 357 TLHAETAVVATGAKLQLFGGI-HEEAAQAILEWLGTGPEDVSPDRLFHTHSLPRRMGPLA 415 Query: 411 AAMGDICGVLAVRFYREQNGYAFWFRNEQVEDVRWGGNPEKKYSIGPLGPRLTPRGSFAV 470 CG+LA+ F RE+ G+A + R EQ+E + WGG PEK+ GPLGPRLTPRGSF + Sbjct: 416 DRAAPWCGLLALPFDRERGGWALFLRREQIETIHWGGRPEKEVRPGPLGPRLTPRGSFEL 475 Query: 471 WKETVRGKSLPWEKTQTEAASQLRLDLQEVALTNENLVKRARETLLATLGHDLRDPLQAI 530 WKETVR + PWE + + A Q+ +LQ + RAR L+A LGHDLRDPL +I Sbjct: 476 WKETVRATAEPWEGVELDIAGQVLDELQRAQHARHAELNRARTQLMAVLGHDLRDPLHSI 535 Query: 531 MMAARMIEVR-EHSPSSSNLSKRISSSSSRMHRLISQVLDISRLQSGMGLDIQRRPVDVR 589 MAAR++E + S + L +RI SSSSRM RL+SQV+D+SRLQSG+GLD+Q D+ Sbjct: 536 SMAARVLEKDGDASGRTGRLGQRIQSSSSRMQRLVSQVMDMSRLQSGLGLDLQIARTDLS 595 Query: 590 KMVSEIVSEARMAYPDNEIILEAEDCGEIALDGDRISQVVSNLISNTRHHGEIGKPSTLI 649 ++++++ EAR A+PD E+ ++ E ++D DRI+QVV NL+SN RHHG G P + Sbjct: 596 ALLADLIDEARTAHPDIELRIQLPPLLEASVDADRIAQVVVNLMSNARHHGRPGHPIHVG 655 Query: 650 VFR-REDVLTIAVSNHGPAIPEPVRSNLFKPYKKESLGNQRNTRGLGLGLYIVSEIVHGH 708 E + I+V N I + V NLF P+K S GN RN G+GLGLYI EIV GH Sbjct: 656 ADPLPEGGVAISVRNVAAPIDDAVAGNLFSPFKASSTGNARNRSGMGLGLYIAYEIVKGH 715 Query: 709 GGKIAVSCDNNIITFTVTLP 728 GG IA + D+ + F+V +P Sbjct: 716 GGTIAYTYDDGHVVFSVRIP 735