BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0072.p (146 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775930.1| Fe-S-cluster oxidoreductase [Herbaspirillum ... 258 2e-67 ref|YP_787345.1| hypothetical protein BAV2849 [Bordetella avium ... 149 1e-34 ref|ZP_06685911.1| ferredoxin [Achromobacter piechaudii ATCC 435... 145 1e-33 ref|YP_004416761.1| hypothetical protein PT7_1597 [Pusillimonas ... 145 2e-33 gb|EFV82960.1| hypothetical protein HMPREF0005_00061 [Achromobac... 140 6e-32 ref|YP_003976905.1| hypothetical protein AXYL_00841 [Achromobact... 140 7e-32 ref|YP_001629337.1| hypothetical protein Bpet0734 [Bordetella pe... 140 7e-32 gb|EGP45650.1| hypothetical protein AXXA_14923 [Achromobacter xy... 140 8e-32 ref|YP_004537737.1| hypothetical protein Thicy_1500 [Thioalkalim... 118 2e-25 ref|YP_003469001.1| ferredoxin [Xenorhabdus bovienii SS-2004] >g... 117 5e-25 >ref|YP_003775930.1| Fe-S-cluster oxidoreductase [Herbaspirillum seropedicae SmR1] gb|ADJ64022.1| Fe-S-cluster oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 127 Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 126/127 (99%), Positives = 127/127 (100%) Query: 20 MADSPDNPCTACGGCCAHFRVSFYCGELSDGLGGMVPVELTSKVNDSLACMKGTEHGHGR 79 MADSPDNPCTACGGCCAHFRVSFYCGELSDGLGGMVPVELTSKVNDSLACMKGTEHGHGR Sbjct: 1 MADSPDNPCTACGGCCAHFRVSFYCGELSDGLGGMVPVELTSKVNDSLACMKGTEHGHGR 60 Query: 80 CIALVGELGQPGVGCSIYPRRPSTCREFSPWEADGRPNPVCQQRRQALGLPALAALPPQQ 139 CIALVGELGQPGVGCSIYPRRPSTCREFSPWEADGRPNPVCQQRRQALGLPAL+ALPPQQ Sbjct: 61 CIALVGELGQPGVGCSIYPRRPSTCREFSPWEADGRPNPVCQQRRQALGLPALSALPPQQ 120 Query: 140 AAPGLPA 146 AAPGLPA Sbjct: 121 AAPGLPA 127 >ref|YP_787345.1| hypothetical protein BAV2849 [Bordetella avium 197N] emb|CAJ50459.1| conserved hypothetical protein [Bordetella avium 197N] Length = 156 Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 72/130 (55%), Positives = 89/130 (68%) Query: 17 FTDMADSPDNPCTACGGCCAHFRVSFYCGELSDGLGGMVPVELTSKVNDSLACMKGTEHG 76 D+A + NPC +CG CCAHFRVSFY GE+S LGG+VP EL ++++ S CMKGTE G Sbjct: 18 LADLAGADANPCLSCGACCAHFRVSFYFGEVSGALGGLVPEELVTQISPSRVCMKGTEQG 77 Query: 77 HGRCIALVGELGQPGVGCSIYPRRPSTCREFSPWEADGRPNPVCQQRRQALGLPALAALP 136 GRC +L GELGQPG+ C+IY RP+ CREF W+ DG PNP CQ+ R LGL L A P Sbjct: 78 GGRCTSLRGELGQPGIHCAIYENRPTPCREFEMWQPDGSPNPDCQRLRARLGLAPLQARP 137 Query: 137 PQQAAPGLPA 146 + P P+ Sbjct: 138 DAENDPQGPS 147 >ref|ZP_06685911.1| ferredoxin [Achromobacter piechaudii ATCC 43553] gb|EFF77186.1| ferredoxin [Achromobacter piechaudii ATCC 43553] Length = 153 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 74/125 (59%), Positives = 87/125 (69%), Gaps = 1/125 (0%) Query: 22 DSPD-NPCTACGGCCAHFRVSFYCGELSDGLGGMVPVELTSKVNDSLACMKGTEHGHGRC 80 D PD NPC CG CCAHFRVSFYCGEL+ GG VPVEL ++++ ACMKGTE G GRC Sbjct: 20 DKPDANPCLDCGACCAHFRVSFYCGELAGENGGQVPVELVTQMSPLRACMKGTEMGGGRC 79 Query: 81 IALVGELGQPGVGCSIYPRRPSTCREFSPWEADGRPNPVCQQRRQALGLPALAALPPQQA 140 I+L GELG+PG+ C+IY RP+ CREF W DG PNP CQ+ R LGLP +A P + Sbjct: 80 ISLRGELGKPGIHCAIYENRPTPCREFDIWMPDGSPNPDCQRLRAGLGLPPVAPRPDAEN 139 Query: 141 APGLP 145 P P Sbjct: 140 DPQGP 144 >ref|YP_004416761.1| hypothetical protein PT7_1597 [Pusillimonas sp. T7-7] gb|AEC20137.1| hypothetical protein PT7_1597 [Pusillimonas sp. T7-7] Length = 188 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 68/107 (63%), Positives = 81/107 (75%) Query: 26 NPCTACGGCCAHFRVSFYCGELSDGLGGMVPVELTSKVNDSLACMKGTEHGHGRCIALVG 85 NPC +CG CCAHFRVSFYCGE++ GG VP EL ++V ACM+GTE+G RC AL G Sbjct: 59 NPCLSCGACCAHFRVSFYCGEIAGESGGTVPPELVTQVGPLRACMQGTEYGGKRCTALRG 118 Query: 86 ELGQPGVGCSIYPRRPSTCREFSPWEADGRPNPVCQQRRQALGLPAL 132 ELGQ G+ C+IY +RPS CREFSPW G PNP CQ+ R+A+GLPAL Sbjct: 119 ELGQSGIHCAIYEQRPSPCREFSPWLEHGEPNPDCQRVRKAIGLPAL 165 >gb|EFV82960.1| hypothetical protein HMPREF0005_00061 [Achromobacter xylosoxidans C54] Length = 157 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 68/121 (56%), Positives = 86/121 (71%) Query: 26 NPCTACGGCCAHFRVSFYCGELSDGLGGMVPVELTSKVNDSLACMKGTEHGHGRCIALVG 85 NPC CG CC+HFRVSFY GEL+ GG VP++L ++++ ACMKGTE G GRCI+L G Sbjct: 26 NPCLDCGACCSHFRVSFYIGELAGENGGQVPLDLVTQMSPLRACMKGTEMGGGRCISLRG 85 Query: 86 ELGQPGVGCSIYPRRPSTCREFSPWEADGRPNPVCQQRRQALGLPALAALPPQQAAPGLP 145 ELG+PG+ C+IY RP+ CREF W+ DG PNP CQ+ R ALGLPA+ P + P P Sbjct: 86 ELGRPGIHCAIYENRPTPCREFDIWQPDGSPNPDCQRLRLALGLPAVPPRPDAENDPQGP 145 Query: 146 A 146 + Sbjct: 146 S 146 >ref|YP_003976905.1| hypothetical protein AXYL_00841 [Achromobacter xylosoxidans A8] gb|ADP14190.1| hypothetical protein AXYL_00841 [Achromobacter xylosoxidans A8] Length = 153 Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 71/124 (57%), Positives = 83/124 (66%) Query: 22 DSPDNPCTACGGCCAHFRVSFYCGELSDGLGGMVPVELTSKVNDSLACMKGTEHGHGRCI 81 D NPC CG CCAHFRVSFYCGEL+ GG VPVEL ++++ ACMKGTE G GRCI Sbjct: 21 DPAANPCLDCGACCAHFRVSFYCGELAGENGGHVPVELVTQMSPLRACMKGTETGGGRCI 80 Query: 82 ALVGELGQPGVGCSIYPRRPSTCREFSPWEADGRPNPVCQQRRQALGLPALAALPPQQAA 141 +L GELGQPG+ C+IY RP+ CREF W DG PNP CQ+ R LGL + P + Sbjct: 81 SLRGELGQPGIHCAIYENRPTPCREFDIWMPDGSPNPDCQRLRLTLGLSPVPPRPDAEND 140 Query: 142 PGLP 145 P P Sbjct: 141 PQGP 144 >ref|YP_001629337.1| hypothetical protein Bpet0734 [Bordetella petrii DSM 12804] emb|CAP41066.1| conserved hypothetical protein [Bordetella petrii] Length = 152 Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 69/121 (57%), Positives = 83/121 (68%) Query: 26 NPCTACGGCCAHFRVSFYCGELSDGLGGMVPVELTSKVNDSLACMKGTEHGHGRCIALVG 85 NPC +CG CCAHFRVSFYCGE++ GG VPV+L ++ CM GTE G GRC+AL G Sbjct: 24 NPCLSCGACCAHFRVSFYCGEVAGENGGTVPVDLVRPISPLRVCMAGTEQGGGRCVALRG 83 Query: 86 ELGQPGVGCSIYPRRPSTCREFSPWEADGRPNPVCQQRRQALGLPALAALPPQQAAPGLP 145 ELGQPG+ C+IY +RP+ CREF W+ DG NP CQ+ R ALGLP LA P + P P Sbjct: 84 ELGQPGIHCAIYLQRPTPCREFEVWQPDGSVNPDCQRLRAALGLPPLAPRPDAENDPQGP 143 Query: 146 A 146 Sbjct: 144 V 144 >gb|EGP45650.1| hypothetical protein AXXA_14923 [Achromobacter xylosoxidans AXX-A] Length = 157 Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 68/121 (56%), Positives = 85/121 (70%) Query: 26 NPCTACGGCCAHFRVSFYCGELSDGLGGMVPVELTSKVNDSLACMKGTEHGHGRCIALVG 85 NPC CG CC+HFRVSFY GEL+ GG VP++L ++++ ACMKGTE G GRCI+L G Sbjct: 26 NPCLDCGACCSHFRVSFYIGELAGENGGQVPLDLVTQMSPLRACMKGTEMGGGRCISLRG 85 Query: 86 ELGQPGVGCSIYPRRPSTCREFSPWEADGRPNPVCQQRRQALGLPALAALPPQQAAPGLP 145 ELGQPG+ C+IY RP+ CREF W DG PNP CQ+ R A+GLPA+ P + P P Sbjct: 86 ELGQPGIHCAIYENRPTPCREFDIWMPDGSPNPDCQRLRLAIGLPAVPPRPDAENDPQGP 145 Query: 146 A 146 + Sbjct: 146 S 146 >ref|YP_004537737.1| hypothetical protein Thicy_1500 [Thioalkalimicrobium cyclicum ALM1] gb|AEG32258.1| protein of unknown function UPF0153 [Thioalkalimicrobium cyclicum ALM1] Length = 128 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/114 (52%), Positives = 72/114 (63%), Gaps = 2/114 (1%) Query: 26 NPCTACGGCCAHFRVSFYCGELSDGLGGMVPVELTSKVNDSLACMKGTEHGHGRCIALVG 85 NPC +CG CC HFRVSFY E LGG VPVELT K+N++ CM+GT + RCI L G Sbjct: 5 NPCLSCGACCHHFRVSFYWSEADPFLGGTVPVELTEKINNNYICMQGTNQPNPRCITLEG 64 Query: 86 ELGQPGVGCSIYPRRPSTCREFSPWEADGRPNPVCQQRRQALGLPALAALPPQQ 139 LG+ GV C IY +RP+ CREF W DG NP C + R G+P + LP Q Sbjct: 65 TLGE-GVSCKIYDQRPTPCREFPLWLEDGSLNPECNRLRALKGMPPI-VLPDHQ 116 >ref|YP_003469001.1| ferredoxin [Xenorhabdus bovienii SS-2004] emb|CBJ82237.1| putative ferredoxin [Xenorhabdus bovienii SS-2004] Length = 125 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 4/122 (3%) Query: 15 RLFTDMADSPDNPCTACGGCCAHFRVSFYCGELSDGLGGMVPVELTSKVNDSLACMKGTE 74 + T ++ DNPC +CG CCA+FRVSFY E DG GG VP+ +T K+N ++CMKGT Sbjct: 7 QTLTSQSNLQDNPCISCGACCAYFRVSFYWAEAEDG-GGTVPIFMTEKLNAFMSCMKGTN 65 Query: 75 HGHGRCIALVGELGQPGVGCSIYPRRPSTCREFS-PWEADGRPNPVCQQRRQALGLPALA 133 + RCI L GE+GQ V C+IY +RPS CREF+ WE D N C + R A GLP L Sbjct: 66 EPNPRCINLRGEIGQ-SVSCTIYDKRPSPCREFTQAWETDDY-NEACDRARAAYGLPPLP 123 Query: 134 AL 135 L Sbjct: 124 KL 125