BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0047.p (287 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775951.1| CobW/P47K family protein [Herbaspirillum ser... 442 e-122 ref|YP_004156477.1| cobalamin synthesis protein p47k [Variovorax... 360 1e-97 gb|EFV83503.1| cobalamin synthesis protein [Achromobacter xyloso... 354 9e-96 ref|YP_001564666.1| cobalamin synthesis protein P47K [Delftia ac... 353 1e-95 ref|YP_004488511.1| cobalamin synthesis protein P47K [Delftia sp... 353 1e-95 gb|EGP44993.1| CobW/P47K family protein [Achromobacter xylosoxid... 353 2e-95 gb|ADX05294.1| Putative regulatory protein [Acinetobacter bauman... 352 3e-95 gb|EGU01658.1| CobW/HypB/UreG, nucleotide-binding domain protein... 352 3e-95 gb|EGT90707.1| CobW/HypB/UreG, nucleotide-binding domain protein... 352 4e-95 gb|ADX94230.1| CobW/P47K family protein [Acinetobacter baumannii... 352 4e-95 >ref|YP_003775951.1| CobW/P47K family protein [Herbaspirillum seropedicae SmR1] gb|ADJ64043.1| CobW/P47K family protein [Herbaspirillum seropedicae SmR1] Length = 404 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 220/221 (99%), Positives = 221/221 (100%) Query: 5 MTSSQRQAADRRLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVR 64 MTSSQRQAADRRLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVR Sbjct: 1 MTSSQRQAADRRLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVR 60 Query: 65 DGGADLSRTEEKLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAE 124 DGGADL+RTEEKLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAE Sbjct: 61 DGGADLARTEEKLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAE 120 Query: 125 TFTFTDEDGASLSDVARLDTMVTVVDAFNFLKDYSSQDSLDQRGQSMGEEDNRTVVDLLI 184 TFTFTDEDGASLSDVARLDTMVTVVDAFNFLKDYSSQDSLDQRGQSMGEEDNRTVVDLLI Sbjct: 121 TFTFTDEDGASLSDVARLDTMVTVVDAFNFLKDYSSQDSLDQRGQSMGEEDNRTVVDLLI 180 Query: 185 EQIEFCDVIVLNKLDLVAADDLERLHAILHKLNPRARIVRA 225 EQIEFCDVIVLNKLDLVAADDLERLHAILHKLNPRARIVRA Sbjct: 181 EQIEFCDVIVLNKLDLVAADDLERLHAILHKLNPRARIVRA 221 >ref|YP_004156477.1| cobalamin synthesis protein p47k [Variovorax paradoxus EPS] gb|ADU38366.1| cobalamin synthesis protein P47K [Variovorax paradoxus EPS] Length = 397 Score = 360 bits (924), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 178/207 (85%), Positives = 190/207 (91%) Query: 16 RLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGADLSRTEE 75 RLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGA LSRT+E Sbjct: 4 RLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGAQLSRTDE 63 Query: 76 KLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAETFTFTDEDGAS 135 KLVEMSNGCICCTLREDLL+EV +LA+E RFDQLVIESTGISEPLPVAETFTF EDG S Sbjct: 64 KLVEMSNGCICCTLREDLLIEVNRLAKEGRFDQLVIESTGISEPLPVAETFTFAGEDGKS 123 Query: 136 LSDVARLDTMVTVVDAFNFLKDYSSQDSLDQRGQSMGEEDNRTVVDLLIEQIEFCDVIVL 195 L+DVARLDTMVTVVDAFNFL+DY S DSL QRGQS+G+ED RTVVDLLIEQIEFCDV+V+ Sbjct: 124 LADVARLDTMVTVVDAFNFLRDYGSPDSLGQRGQSLGDEDTRTVVDLLIEQIEFCDVLVV 183 Query: 196 NKLDLVAADDLERLHAILHKLNPRARI 222 NK DLV ++ ERL AIL LNPRARI Sbjct: 184 NKTDLVTPEERERLMAILQSLNPRARI 210 >gb|EFV83503.1| cobalamin synthesis protein [Achromobacter xylosoxidans C54] Length = 435 Score = 354 bits (908), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 174/210 (82%), Positives = 193/210 (91%) Query: 16 RLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGADLSRTEE 75 RLPVTVLSGFLGAGKT+LLNH+L+NREGRRVAVIVNDMSEVNIDA LVR+GGA LSR +E Sbjct: 40 RLPVTVLSGFLGAGKTSLLNHVLNNREGRRVAVIVNDMSEVNIDARLVREGGAALSRADE 99 Query: 76 KLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAETFTFTDEDGAS 135 KLVEMSNGCICCTLREDLL+E+R+LA E RFD L+IESTGISEPLPVAETFTF DEDGAS Sbjct: 100 KLVEMSNGCICCTLREDLLIEIRRLAAEGRFDYLLIESTGISEPLPVAETFTFRDEDGAS 159 Query: 136 LSDVARLDTMVTVVDAFNFLKDYSSQDSLDQRGQSMGEEDNRTVVDLLIEQIEFCDVIVL 195 LSD+ARLDTMVTVVDAFNFL+DY+S DSL RG+++G+ED RTVVDLLIEQ+EFCDV+VL Sbjct: 160 LSDLARLDTMVTVVDAFNFLRDYASHDSLAARGETLGDEDGRTVVDLLIEQVEFCDVMVL 219 Query: 196 NKLDLVAADDLERLHAILHKLNPRARIVRA 225 NK DLVAAD+L RL AIL KLNPRA IVR Sbjct: 220 NKTDLVAADELARLEAILRKLNPRADIVRG 249 >ref|YP_001564666.1| cobalamin synthesis protein P47K [Delftia acidovorans SPH-1] gb|ABX36281.1| cobalamin synthesis protein P47K [Delftia acidovorans SPH-1] Length = 423 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 179/217 (82%), Positives = 190/217 (87%) Query: 6 TSSQRQAADRRLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRD 65 T + Q RLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRD Sbjct: 21 TVAPVQPPHARLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRD 80 Query: 66 GGADLSRTEEKLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAET 125 GGA LSRT+EKLVEMSNGCICCTLREDLL+EV +LA E RFDQLVIESTGISEPLPVAET Sbjct: 81 GGAGLSRTDEKLVEMSNGCICCTLREDLLLEVARLAGEGRFDQLVIESTGISEPLPVAET 140 Query: 126 FTFTDEDGASLSDVARLDTMVTVVDAFNFLKDYSSQDSLDQRGQSMGEEDNRTVVDLLIE 185 FTF EDG SL DVARLDTMVTVVDAFNFL DY S+DSL RG+S+GEED RTVVDLLIE Sbjct: 141 FTFAGEDGRSLGDVARLDTMVTVVDAFNFLHDYGSRDSLRSRGESLGEEDRRTVVDLLIE 200 Query: 186 QIEFCDVIVLNKLDLVAADDLERLHAILHKLNPRARI 222 Q+EFCDVIVLNK+DLV +D RL AIL LNPRAR+ Sbjct: 201 QVEFCDVIVLNKIDLVTDEDCSRLMAILRGLNPRARL 237 >ref|YP_004488511.1| cobalamin synthesis protein P47K [Delftia sp. Cs1-4] gb|AEF90156.1| cobalamin synthesis protein P47K [Delftia sp. Cs1-4] Length = 406 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 179/217 (82%), Positives = 190/217 (87%) Query: 6 TSSQRQAADRRLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRD 65 T + Q RLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRD Sbjct: 4 TVAPVQPPHARLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRD 63 Query: 66 GGADLSRTEEKLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAET 125 GGA LSRT+EKLVEMSNGCICCTLREDLL+EV +LA E RFDQLVIESTGISEPLPVAET Sbjct: 64 GGAGLSRTDEKLVEMSNGCICCTLREDLLLEVARLAGEGRFDQLVIESTGISEPLPVAET 123 Query: 126 FTFTDEDGASLSDVARLDTMVTVVDAFNFLKDYSSQDSLDQRGQSMGEEDNRTVVDLLIE 185 FTF EDG SL DVARLDTMVTVVDAFNFL DY S+DSL RG+S+GEED RTVVDLLIE Sbjct: 124 FTFAGEDGRSLGDVARLDTMVTVVDAFNFLHDYGSRDSLRSRGESLGEEDRRTVVDLLIE 183 Query: 186 QIEFCDVIVLNKLDLVAADDLERLHAILHKLNPRARI 222 Q+EFCDVIVLNK+DLV +D RL AIL LNPRAR+ Sbjct: 184 QVEFCDVIVLNKIDLVTEEDCTRLMAILRGLNPRARL 220 >gb|EGP44993.1| CobW/P47K family protein [Achromobacter xylosoxidans AXX-A] Length = 416 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 174/213 (81%), Positives = 194/213 (91%) Query: 13 ADRRLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGADLSR 72 +D RLPVTVLSGFLGAGKTTLLNH+L+NREGRRVAVIVNDMS+VNIDA LVR+GGA LSR Sbjct: 18 SDARLPVTVLSGFLGAGKTTLLNHVLNNREGRRVAVIVNDMSDVNIDARLVREGGAALSR 77 Query: 73 TEEKLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAETFTFTDED 132 +EKLVEMSNGCICCTLREDLL+E+R+LA E RFD L+IESTGISEPLPVAETFTF DED Sbjct: 78 ADEKLVEMSNGCICCTLREDLLIEIRRLAAEGRFDYLLIESTGISEPLPVAETFTFRDED 137 Query: 133 GASLSDVARLDTMVTVVDAFNFLKDYSSQDSLDQRGQSMGEEDNRTVVDLLIEQIEFCDV 192 G SLSDVARLDTMVTVVDAFNFL+DY+S D L RG+++GEED RTVVDLLIEQ+EFCDV Sbjct: 138 GLSLSDVARLDTMVTVVDAFNFLRDYASHDRLAARGETLGEEDERTVVDLLIEQVEFCDV 197 Query: 193 IVLNKLDLVAADDLERLHAILHKLNPRARIVRA 225 +VLNK DL+AAD+LERL AIL +LNPRA IVR Sbjct: 198 MVLNKTDLIAADELERLEAILRQLNPRADIVRG 230 >gb|ADX05294.1| Putative regulatory protein [Acinetobacter baumannii 1656-2] Length = 421 Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 173/207 (83%), Positives = 191/207 (92%) Query: 16 RLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGADLSRTEE 75 +LPVTVLSGFLGAGKTTLLNHIL+NREGRR+AVIVNDMSEVNIDAALVR+GGA+LSRT+E Sbjct: 23 KLPVTVLSGFLGAGKTTLLNHILNNREGRRIAVIVNDMSEVNIDAALVREGGAELSRTDE 82 Query: 76 KLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAETFTFTDEDGAS 135 KLVEMSNGCICCTLREDLL+EVR+LA E RFDQLVIESTGISEPLPVAETFTF DEDG S Sbjct: 83 KLVEMSNGCICCTLREDLLVEVRRLADEGRFDQLVIESTGISEPLPVAETFTFEDEDGNS 142 Query: 136 LSDVARLDTMVTVVDAFNFLKDYSSQDSLDQRGQSMGEEDNRTVVDLLIEQIEFCDVIVL 195 L++ ARLDTMVTVVDAFNFLKDYSS DSL QRG+S+GE+D RTVVDLLI+QIEFCDVIVL Sbjct: 143 LNEFARLDTMVTVVDAFNFLKDYSSVDSLQQRGESLGEQDERTVVDLLIDQIEFCDVIVL 202 Query: 196 NKLDLVAADDLERLHAILHKLNPRARI 222 NK+DL+ ++L AIL LNPRARI Sbjct: 203 NKIDLIDQAQQDQLIAILKTLNPRARI 229 >gb|EGU01658.1| CobW/HypB/UreG, nucleotide-binding domain protein [Acinetobacter baumannii ABNIH4] Length = 421 Score = 352 bits (903), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 173/207 (83%), Positives = 191/207 (92%) Query: 16 RLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGADLSRTEE 75 +LPVTVLSGFLGAGKTTLLNHIL+NREGRR+AVIVNDMSEVNIDAALVR+GGA+LSRT+E Sbjct: 23 KLPVTVLSGFLGAGKTTLLNHILNNREGRRIAVIVNDMSEVNIDAALVREGGAELSRTDE 82 Query: 76 KLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAETFTFTDEDGAS 135 KLVEMSNGCICCTLREDLL+EVR+LA E RFDQLVIESTGISEPLPVAETFTF DEDG S Sbjct: 83 KLVEMSNGCICCTLREDLLVEVRRLANEGRFDQLVIESTGISEPLPVAETFTFEDEDGNS 142 Query: 136 LSDVARLDTMVTVVDAFNFLKDYSSQDSLDQRGQSMGEEDNRTVVDLLIEQIEFCDVIVL 195 L++ ARLDTMVTVVDAFNFLKDYSS DSL QRG+S+GE+D RTVVDLLI+QIEFCDVIVL Sbjct: 143 LNEFARLDTMVTVVDAFNFLKDYSSVDSLQQRGESLGEQDERTVVDLLIDQIEFCDVIVL 202 Query: 196 NKLDLVAADDLERLHAILHKLNPRARI 222 NK+DL+ ++L AIL LNPRARI Sbjct: 203 NKIDLIDRAQQDQLIAILKTLNPRARI 229 >gb|EGT90707.1| CobW/HypB/UreG, nucleotide-binding domain protein [Acinetobacter baumannii ABNIH1] Length = 409 Score = 352 bits (903), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 173/207 (83%), Positives = 191/207 (92%) Query: 16 RLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGADLSRTEE 75 +LPVTVLSGFLGAGKTTLLNHIL+NREGRR+AVIVNDMSEVNIDAALVR+GGA+LSRT+E Sbjct: 11 KLPVTVLSGFLGAGKTTLLNHILNNREGRRIAVIVNDMSEVNIDAALVREGGAELSRTDE 70 Query: 76 KLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAETFTFTDEDGAS 135 KLVEMSNGCICCTLREDLL+EVR+LA E RFDQLVIESTGISEPLPVAETFTF DEDG S Sbjct: 71 KLVEMSNGCICCTLREDLLVEVRRLANEGRFDQLVIESTGISEPLPVAETFTFEDEDGNS 130 Query: 136 LSDVARLDTMVTVVDAFNFLKDYSSQDSLDQRGQSMGEEDNRTVVDLLIEQIEFCDVIVL 195 L++ ARLDTMVTVVDAFNFLKDYSS DSL QRG+S+GE+D RTVVDLLI+QIEFCDVIVL Sbjct: 131 LNEFARLDTMVTVVDAFNFLKDYSSVDSLQQRGESLGEQDERTVVDLLIDQIEFCDVIVL 190 Query: 196 NKLDLVAADDLERLHAILHKLNPRARI 222 NK+DL+ ++L AIL LNPRARI Sbjct: 191 NKIDLIDRAQQDQLIAILKTLNPRARI 217 >gb|ADX94230.1| CobW/P47K family protein [Acinetobacter baumannii TCDC-AB0715] gb|EGK47426.1| G3E family GTPase [Acinetobacter baumannii AB210] Length = 421 Score = 352 bits (903), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 173/207 (83%), Positives = 191/207 (92%) Query: 16 RLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGADLSRTEE 75 +LPVTVLSGFLGAGKTTLLNHIL+NREGRR+AVIVNDMSEVNIDAALVR+GGA+LSRT+E Sbjct: 23 KLPVTVLSGFLGAGKTTLLNHILNNREGRRIAVIVNDMSEVNIDAALVREGGAELSRTDE 82 Query: 76 KLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAETFTFTDEDGAS 135 KLVEMSNGCICCTLREDLL+EVR+LA E RFDQLVIESTGISEPLPVAETFTF DEDG S Sbjct: 83 KLVEMSNGCICCTLREDLLVEVRRLADEGRFDQLVIESTGISEPLPVAETFTFEDEDGNS 142 Query: 136 LSDVARLDTMVTVVDAFNFLKDYSSQDSLDQRGQSMGEEDNRTVVDLLIEQIEFCDVIVL 195 L++ ARLDTMVTVVDAFNFLKDYSS DSL QRG+S+GE+D RTVVDLLI+QIEFCDVIVL Sbjct: 143 LNEFARLDTMVTVVDAFNFLKDYSSVDSLQQRGESLGEQDERTVVDLLIDQIEFCDVIVL 202 Query: 196 NKLDLVAADDLERLHAILHKLNPRARI 222 NK+DL+ ++L AIL LNPRARI Sbjct: 203 NKIDLIDQAQQDQLIAILKTLNPRARI 229