BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0030.p (262 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775962.1| hypothetical protein Hsero_2555 [Herbaspiril... 538 e-151 ref|YP_524491.1| hypothetical protein Rfer_3251 [Rhodoferax ferr... 403 e-110 ref|YP_001890386.1| hypothetical protein Bphyt_6720 [Burkholderi... 400 e-110 ref|YP_287173.1| hypothetical protein Daro_3976 [Dechloromonas a... 395 e-108 ref|ZP_06842157.1| extracellular solute-binding protein family 3... 385 e-105 ref|YP_557996.1| hypothetical protein Bxe_A3035 [Burkholderia xe... 384 e-105 ref|YP_001859972.1| hypothetical protein Bphy_3795 [Burkholderia... 379 e-103 ref|YP_422292.1| hypothetical protein amb2929 [Magnetospirillum ... 360 1e-97 ref|NP_903892.1| hypothetical protein CV_4222 [Chromobacterium v... 122 5e-26 ref|ZP_08571088.1| periplasmic component of amino acid ABC-type ... 119 4e-25 >ref|YP_003775962.1| hypothetical protein Hsero_2555 [Herbaspirillum seropedicae SmR1] gb|ADJ64054.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 285 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 262/262 (100%), Positives = 262/262 (100%) Query: 1 VSLALSASPASLAASPPAASGPDCSRPYTLALHDHGLLYSSATDTGIDKDFADELIRRSG 60 VSLALSASPASLAASPPAASGPDCSRPYTLALHDHGLLYSSATDTGIDKDFADELIRRSG Sbjct: 24 VSLALSASPASLAASPPAASGPDCSRPYTLALHDHGLLYSSATDTGIDKDFADELIRRSG 83 Query: 61 CKVNVSLMSRARIWQLIESGALDFSLSGITNAQRDQFASFAWYFSNKYYLLVRKDAGVMQ 120 CKVNVSLMSRARIWQLIESGALDFSLSGITNAQRDQFASFAWYFSNKYYLLVRKDAGVMQ Sbjct: 84 CKVNVSLMSRARIWQLIESGALDFSLSGITNAQRDQFASFAWYFSNKYYLLVRKDAGVMQ 143 Query: 121 LADVTRNERFHLGVIRGFRYSANANRMVDQLTASNRVSQAGGLEPLYDALLLDRIQGMIM 180 LADVTRNERFHLGVIRGFRYSANANRMVDQLTASNRVSQAGGLEPLYDALLLDRIQGMIM Sbjct: 144 LADVTRNERFHLGVIRGFRYSANANRMVDQLTASNRVSQAGGLEPLYDALLLDRIQGMIM 203 Query: 181 EPFDYPVVQEKRIRDATTIISFDDPSVPHGLIMSRKALSPAEQDKWRALVDGMRADGTVL 240 EPFDYPVVQEKRIRDATTIISFDDPSVPHGLIMSRKALSPAEQDKWRALVDGMRADGTVL Sbjct: 204 EPFDYPVVQEKRIRDATTIISFDDPSVPHGLIMSRKALSPAEQDKWRALVDGMRADGTVL 263 Query: 241 RIFQKYFNAELAASMVQFQSKP 262 RIFQKYFNAELAASMVQFQSKP Sbjct: 264 RIFQKYFNAELAASMVQFQSKP 285 >ref|YP_524491.1| hypothetical protein Rfer_3251 [Rhodoferax ferrireducens T118] gb|ABD70960.1| conserved hypothetical protein [Rhodoferax ferrireducens T118] Length = 264 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 194/260 (74%), Positives = 223/260 (85%), Gaps = 6/260 (2%) Query: 3 LALSASPASLAASPPAASGPDCSRPYTLALHDHGLLYSSATDTGIDKDFADELIRRSGCK 62 LAL A S+AA GPDCSRP TLALHDHGLLYS+ TD GIDKDFADELIRRSGCK Sbjct: 11 LALCAIATSVAA------GPDCSRPLTLALHDHGLLYSADTDAGIDKDFADELIRRSGCK 64 Query: 63 VNVSLMSRARIWQLIESGALDFSLSGITNAQRDQFASFAWYFSNKYYLLVRKDAGVMQLA 122 + VSLMSRARIWQLIESGALDFSLSGITNA+R++FA FAWYFSNKYYLLVR+D+GV QLA Sbjct: 65 IAVSLMSRARIWQLIESGALDFSLSGITNAERNRFAGFAWYFSNKYYLLVRRDSGVRQLA 124 Query: 123 DVTRNERFHLGVIRGFRYSANANRMVDQLTASNRVSQAGGLEPLYDALLLDRIQGMIMEP 182 D R++ F LGVIR FRYS +ANR+VD+LT +NRVSQA GL PLY+ LLL+RIQGMI+EP Sbjct: 125 DFERSDPFRLGVIRSFRYSESANRLVDKLTLANRVSQANGLAPLYETLLLNRIQGMIIEP 184 Query: 183 FDYPVVQEKRIRDATTIISFDDPSVPHGLIMSRKALSPAEQDKWRALVDGMRADGTVLRI 242 FDYP + +K+IRD T++I FDDP+VPHGLIMS+KALSPAEQDKWRALV+ MRADGTV RI Sbjct: 185 FDYPALDQKKIRDITSVIEFDDPAVPHGLIMSKKALSPAEQDKWRALVNDMRADGTVRRI 244 Query: 243 FQKYFNAELAASMVQFQSKP 262 F+KYF+ LAA++V FQ P Sbjct: 245 FEKYFDPGLAAALVAFQPPP 264 >ref|YP_001890386.1| hypothetical protein Bphyt_6720 [Burkholderia phytofirmans PsJN] gb|ACD21015.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN] Length = 264 Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust. Identities = 190/260 (73%), Positives = 222/260 (85%), Gaps = 6/260 (2%) Query: 3 LALSASPASLAASPPAASGPDCSRPYTLALHDHGLLYSSATDTGIDKDFADELIRRSGCK 62 LALS ++AA GPDCSR +TLALHDHGLLYS TDTGIDKDFADELIRRSGC+ Sbjct: 11 LALSCVGNAMAA------GPDCSRSFTLALHDHGLLYSVDTDTGIDKDFADELIRRSGCQ 64 Query: 63 VNVSLMSRARIWQLIESGALDFSLSGITNAQRDQFASFAWYFSNKYYLLVRKDAGVMQLA 122 + VSLMSRARIW+LIESG LDFSLSGITN +R+++A FAWYFSNKYYLLVRKDAG+ +LA Sbjct: 65 IRVSLMSRARIWKLIESGGLDFSLSGITNDERNEYADFAWYFSNKYYLLVRKDAGIHRLA 124 Query: 123 DVTRNERFHLGVIRGFRYSANANRMVDQLTASNRVSQAGGLEPLYDALLLDRIQGMIMEP 182 D N+RF LGVIR FRYS +ANR+VD+L+A NRVSQAGGLEPLY AL+L RIQGMI+EP Sbjct: 125 DFEHNDRFQLGVIRSFRYSDSANRLVDKLSAENRVSQAGGLEPLYQALILRRIQGMIIEP 184 Query: 183 FDYPVVQEKRIRDATTIISFDDPSVPHGLIMSRKALSPAEQDKWRALVDGMRADGTVLRI 242 FDYP + EK+IRD TTI+ FDDP+V HGLIMS+KALSPAE++KWRALV+ MRADGTV RI Sbjct: 185 FDYPAIDEKKIRDVTTIVEFDDPAVRHGLIMSKKALSPAEREKWRALVNEMRADGTVRRI 244 Query: 243 FQKYFNAELAASMVQFQSKP 262 F+KYF +LA SMV F+++P Sbjct: 245 FEKYFKPDLADSMVDFKTQP 264 >ref|YP_287173.1| hypothetical protein Daro_3976 [Dechloromonas aromatica RCB] gb|AAZ48703.1| amino acid ABC transporter substrate-binding protein, PAAT family [Dechloromonas aromatica RCB] Length = 260 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 184/241 (76%), Positives = 212/241 (87%) Query: 18 AASGPDCSRPYTLALHDHGLLYSSATDTGIDKDFADELIRRSGCKVNVSLMSRARIWQLI 77 +ASGPDCSRPYTLALHDHGLLYS+ATDTGIDKD ADELIRRSGCKV VSLM+RARIWQLI Sbjct: 20 SASGPDCSRPYTLALHDHGLLYSAATDTGIDKDVADELIRRSGCKVTVSLMARARIWQLI 79 Query: 78 ESGALDFSLSGITNAQRDQFASFAWYFSNKYYLLVRKDAGVMQLADVTRNERFHLGVIRG 137 ESGALDFSLSGI NA+RD+FA+FAWYFSNKYYLLVRKD+GV AD RNE+ LGVIRG Sbjct: 80 ESGALDFSLSGINNAERDKFAAFAWYFSNKYYLLVRKDSGVSNRADFERNEKLQLGVIRG 139 Query: 138 FRYSANANRMVDQLTASNRVSQAGGLEPLYDALLLDRIQGMIMEPFDYPVVQEKRIRDAT 197 FRYS ANR+VD+L A+NR+SQAGGL PLY L+L+ IQGMI+EPFDYP ++EK+IRD + Sbjct: 140 FRYSETANRLVDRLQATNRLSQAGGLAPLYQTLILNHIQGMIIEPFDYPSLEEKQIRDLS 199 Query: 198 TIISFDDPSVPHGLIMSRKALSPAEQDKWRALVDGMRADGTVLRIFQKYFNAELAASMVQ 257 TII F+DP+VPHGLIMS+KAL AEQ+KWR+LV MR DGT+ RIF+KYF +LAA+MV Sbjct: 200 TIIEFNDPAVPHGLIMSKKALPTAEQEKWRSLVTEMRRDGTMRRIFEKYFRPDLAAAMVD 259 Query: 258 F 258 F Sbjct: 260 F 260 >ref|ZP_06842157.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gb|EFG70109.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 264 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 178/244 (72%), Positives = 212/244 (86%) Query: 19 ASGPDCSRPYTLALHDHGLLYSSATDTGIDKDFADELIRRSGCKVNVSLMSRARIWQLIE 78 A+GPDCSRP+TL LHDHGLLYS TD+GIDKDFADELIRRSGC++ +SLMSRARIW+LIE Sbjct: 21 AAGPDCSRPFTLGLHDHGLLYSLDTDSGIDKDFADELIRRSGCQIKLSLMSRARIWKLIE 80 Query: 79 SGALDFSLSGITNAQRDQFASFAWYFSNKYYLLVRKDAGVMQLADVTRNERFHLGVIRGF 138 SGALDFSLSGI N +R+Q+ASFAWYFSNKYYLLVRKDAG+ +A+ +++ LGVIR F Sbjct: 81 SGALDFSLSGIANDERNQYASFAWYFSNKYYLLVRKDAGIHDVAEFEQDDHAQLGVIRSF 140 Query: 139 RYSANANRMVDQLTASNRVSQAGGLEPLYDALLLDRIQGMIMEPFDYPVVQEKRIRDATT 198 RYS +AN++VD+LTA NR+SQAGGLEPLY AL+L IQGMI+EPFDYP ++EK+IRD TT Sbjct: 141 RYSDSANQLVDKLTAENRISQAGGLEPLYQALILRHIQGMIIEPFDYPALEEKKIRDVTT 200 Query: 199 IISFDDPSVPHGLIMSRKALSPAEQDKWRALVDGMRADGTVLRIFQKYFNAELAASMVQF 258 II F+DPSVPHGLIMS+KAL AE+ KW+ALVD MRADGTV RIF+KYF ELA +MV F Sbjct: 201 IIEFNDPSVPHGLIMSKKALPEAERKKWQALVDEMRADGTVRRIFEKYFRPELADAMVNF 260 Query: 259 QSKP 262 ++ P Sbjct: 261 KASP 264 >ref|YP_557996.1| hypothetical protein Bxe_A3035 [Burkholderia xenovorans LB400] gb|ABE29944.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 264 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 179/253 (70%), Positives = 216/253 (85%) Query: 10 ASLAASPPAASGPDCSRPYTLALHDHGLLYSSATDTGIDKDFADELIRRSGCKVNVSLMS 69 A+ S A+GPDCSRP+TL LHDHGLLYS TD+GIDKDFADELIRRSGC++ +SLMS Sbjct: 12 ATCCVSNVFAAGPDCSRPFTLGLHDHGLLYSLDTDSGIDKDFADELIRRSGCQIKLSLMS 71 Query: 70 RARIWQLIESGALDFSLSGITNAQRDQFASFAWYFSNKYYLLVRKDAGVMQLADVTRNER 129 RARIW+LIESGALDFSLSGI N +R+Q+ASFAWYFS+KYYLLVRKDAG+ +A+ +++ Sbjct: 72 RARIWKLIESGALDFSLSGIANDERNQYASFAWYFSDKYYLLVRKDAGIHDVAEFEQDDH 131 Query: 130 FHLGVIRGFRYSANANRMVDQLTASNRVSQAGGLEPLYDALLLDRIQGMIMEPFDYPVVQ 189 LGVIR FRYS +AN++VD+LTA NR+SQAGGLEPLY AL+L IQGMI+EPFDYP ++ Sbjct: 132 AQLGVIRSFRYSDSANQLVDKLTAENRISQAGGLEPLYQALILRHIQGMIVEPFDYPALE 191 Query: 190 EKRIRDATTIISFDDPSVPHGLIMSRKALSPAEQDKWRALVDGMRADGTVLRIFQKYFNA 249 EK+IR+ATTII F+DPSVPHGLIMS+KAL AE+ KW+ALVD MRADGTV RIF+KYF Sbjct: 192 EKKIREATTIIEFNDPSVPHGLIMSKKALPEAERKKWQALVDEMRADGTVRRIFEKYFRP 251 Query: 250 ELAASMVQFQSKP 262 ELA +MV F++ P Sbjct: 252 ELADAMVNFKASP 264 >ref|YP_001859972.1| hypothetical protein Bphy_3795 [Burkholderia phymatum STM815] gb|ACC72926.1| conserved hypothetical protein [Burkholderia phymatum STM815] Length = 267 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 175/240 (72%), Positives = 205/240 (85%) Query: 19 ASGPDCSRPYTLALHDHGLLYSSATDTGIDKDFADELIRRSGCKVNVSLMSRARIWQLIE 78 A GPDC+RP+TLALHDHGLLYS T+ GIDKDFADEL RRSGC++ VSLMSRARIW++IE Sbjct: 24 AGGPDCTRPFTLALHDHGLLYSQDTNAGIDKDFADELARRSGCEIRVSLMSRARIWKVIE 83 Query: 79 SGALDFSLSGITNAQRDQFASFAWYFSNKYYLLVRKDAGVMQLADVTRNERFHLGVIRGF 138 SGALDFSLSGITN +RD++ASFAWYFS+++YLLVRKDAG+ QL+D N+ F LGVIR F Sbjct: 84 SGALDFSLSGITNEERDRYASFAWYFSDRFYLLVRKDAGIRQLSDFEHNDNFQLGVIRSF 143 Query: 139 RYSANANRMVDQLTASNRVSQAGGLEPLYDALLLDRIQGMIMEPFDYPVVQEKRIRDATT 198 RY +AN +VD L A+NRVSQAGGL+PLY AL+ IQGMI+EPFDYP + EKRIRD TT Sbjct: 144 RYGQSANELVDTLAAANRVSQAGGLDPLYQALMRGSIQGMIIEPFDYPALDEKRIRDITT 203 Query: 199 IISFDDPSVPHGLIMSRKALSPAEQDKWRALVDGMRADGTVLRIFQKYFNAELAASMVQF 258 I+ F+DP+ PHGLIMS+KALSP E+DKWRALV+ MRADGTV RIF+KYF ELA SMV F Sbjct: 204 IVEFNDPATPHGLIMSKKALSPEERDKWRALVEEMRADGTVRRIFRKYFKPELADSMVDF 263 >ref|YP_422292.1| hypothetical protein amb2929 [Magnetospirillum magneticum AMB-1] dbj|BAE51733.1| hypothetical protein [Magnetospirillum magneticum AMB-1] Length = 266 Score = 360 bits (923), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 179/263 (68%), Positives = 207/263 (78%), Gaps = 7/263 (2%) Query: 1 VSLALSASPA-SLAASPPAASGPDCSRPYTLALHDHGLLYSSATDTGIDKDFADELIRRS 59 VSL L +P +LAASP DC RP+TLALHDHGLLYS+ TD+GIDKD A+EL RRS Sbjct: 10 VSLCLWFAPGVALAASP------DCWRPFTLALHDHGLLYSAETDSGIDKDIAEELGRRS 63 Query: 60 GCKVNVSLMSRARIWQLIESGALDFSLSGITNAQRDQFASFAWYFSNKYYLLVRKDAGVM 119 GCK+ VSLMSRARIWQLIESGALDFSLSGI NA+R++FA+FAWY SNKYYLLVRKDAG+ Sbjct: 64 GCKLVVSLMSRARIWQLIESGALDFSLSGIANAERNRFAAFAWYISNKYYLLVRKDAGIR 123 Query: 120 QLADVTRNERFHLGVIRGFRYSANANRMVDQLTASNRVSQAGGLEPLYDALLLDRIQGMI 179 +LAD R+E LGVIR FRYS AN++VD L A+ RVSQ+ GL PLY L + IQ MI Sbjct: 124 KLADFERDEHLRLGVIRSFRYSETANQLVDSLQAAGRVSQSAGLGPLYRVLSANAIQAMI 183 Query: 180 MEPFDYPVVQEKRIRDATTIISFDDPSVPHGLIMSRKALSPAEQDKWRALVDGMRADGTV 239 +EPFDYP + EKRIRD T II F+DP+VPHGLIMS+ +LSP EQDKWR LV MR DGTV Sbjct: 184 IEPFDYPALDEKRIRDFTDIIEFNDPAVPHGLIMSKASLSPEEQDKWRDLVREMRRDGTV 243 Query: 240 LRIFQKYFNAELAASMVQFQSKP 262 RIFQKYF +LAA+M +F P Sbjct: 244 RRIFQKYFPPDLAAAMTEFDDSP 266 >ref|NP_903892.1| hypothetical protein CV_4222 [Chromobacterium violaceum ATCC 12472] gb|AAQ61882.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 265 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 75/242 (30%), Positives = 126/242 (52%), Gaps = 10/242 (4%) Query: 14 ASPPAASGPDCSRPYTLALHDHGLLYSSATDTGIDKDFADELIRRSGCKVNVSLMSRARI 73 AS P+ PD P LA + GL Y+ G+D D A+EL RRSGC+ ++M RARI Sbjct: 19 ASTPSFHCPD--HPIRLAFYPIGLFYTDRN--GLDWDVAEELRRRSGCRFEYAVMPRARI 74 Query: 74 WQLIESGALDFSLSGITNAQRDQFASFAWYFSNKYYLLV--RKDAGVMQLAD-VTRNERF 130 W+ +E+G LD +LS I+ +R++ F Y K Y+L+ + A + + + E + Sbjct: 75 WRELEAGRLDITLSAISTPERERIYWFLNYIQLKQYVLLSPKLPASIRSMESFIQAGEPW 134 Query: 131 HLGVIRGFRYSANANRMVDQLTASNRVSQAGGLEPLYDALLLDRIQGMIMEPFDY-PVVQ 189 ++R + S + ++ QL A RV + + LY L +R+ G+ P Y ++ Sbjct: 135 RWAIVRSYSTSEYYDPLIAQLAAKGRVVEVPAEDALYRLLAQNRVAGIFSTPMVYREKLR 194 Query: 190 EKRIRDATTIISFDDPSV--PHGLIMSRKALSPAEQDKWRALVDGMRADGTVLRIFQKYF 247 E + D+ + +D S P G++ +++ + +W+ALVD M DGT+ R+ +Y Sbjct: 195 EFNLDDSVRVADWDKVSAPSPRGIVFTKQTFPEPDIRQWQALVDKMNHDGTMRRLINRYM 254 Query: 248 NA 249 A Sbjct: 255 TA 256 >ref|ZP_08571088.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Rheinheimera sp. A13L] gb|EGM77457.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Rheinheimera sp. A13L] Length = 269 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 128/252 (50%), Gaps = 15/252 (5%) Query: 15 SPPAASGPDC-SRPYTLALHDHGLLYSSATDTGIDKDFADELIRRSGCKVNVSLMSRARI 73 SP + + C + +T L++HG+L+ +GID+D +E+ R+GCK+ SLM RARI Sbjct: 22 SPVSIAAIQCPEKAWTAGLYEHGVLFFDGR-SGIDQDIINEIRHRTGCKIYSSLMPRARI 80 Query: 74 WQLIESGALDFSLSGITNAQRDQFASFAWYFSNKYYLLVRKDA--GVMQLADVTRNERFH 131 W +E LD S+SG+ +R FA F Y K +L+ + V Q + Sbjct: 81 WYDLEQANLDMSVSGVETPERLLFAWFVPYMQMKNIVLLSPEVPLSVQQPEEFLLRSDLR 140 Query: 132 LGVIRGFRYSANANRMVDQLTASNRVSQAGGLEPLYDALLLDRIQGMIMEPFDY----PV 187 G +R F++ + + QLT NRV L+ AL R+Q + + Y P Sbjct: 141 FGAVRSFKHGLLHDTFLQQLTTQNRVLYYTDSITLFKALKQGRVQAIFAQSPVYRRLLPQ 200 Query: 188 VQ---EKRIRDATTIISFDDPSVPHGLIMSRKALSPAEQDKWRALVDGMRADGTVLRIFQ 244 +Q + R+ D + VPHGL++++ + + + + WR L++ ++ DGT+L+I+ Sbjct: 201 LQFAVQPRMLDWYR----QEQGVPHGLVLAKASFTQPDVEHWRLLMEELKRDGTLLKIYS 256 Query: 245 KYFNAELAASMV 256 Y + A +++ Sbjct: 257 VYLPQQEAEALI 268