BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0005.p (154 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775983.1| spore coat U domain-containing protein [Herb... 301 2e-80 ref|YP_003544153.1| putative secreted pili protein [Sphingobium ... 119 1e-25 ref|YP_003847357.1| Spore coat protein U [Gallionella capsiferri... 117 4e-25 ref|YP_741621.1| spore coat U domain-containing protein [Alkalil... 113 1e-23 ref|YP_004753067.1| hypothetical protein CFU_2417 [Collimonas fu... 112 1e-23 ref|ZP_06843933.1| Spore coat U domain protein [Burkholderia sp.... 111 3e-23 ref|YP_002218478.1| Spore coat U domain-containing protein [Acid... 109 1e-22 ref|YP_246723.1| hypothetical protein RF_0707 [Rickettsia felis ... 100 8e-20 ref|YP_357467.1| putative lipoprotein [Pelobacter carbinolicus D... 100 1e-19 ref|YP_554955.1| putative lipoprotein [Burkholderia xenovorans L... 99 2e-19 >ref|YP_003775983.1| spore coat U domain-containing protein [Herbaspirillum seropedicae SmR1] gb|ADJ64075.1| spore coat U domain protein [Herbaspirillum seropedicae SmR1] Length = 172 Score = 301 bits (772), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 153/154 (99%), Positives = 153/154 (99%) Query: 1 MASAAILALLLVAGTPAGAQQVCSASSSPVSFGLYDPQSSATIDNAGSISVTCQATVSLL 60 MA AAILALLLVAGTPAGAQQVCSASSSPVSFGLYDPQSSATIDNAGSISVTCQATVSLL Sbjct: 19 MARAAILALLLVAGTPAGAQQVCSASSSPVSFGLYDPQSSATIDNAGSISVTCQATVSLL 78 Query: 61 MAYTVKLSSGNSGALSQRKMLSGANSLNYQVYTDAARSSIWGDGSSGTSFITDGYLLQVL 120 MAYTVKLSSGNSGALSQRKMLSGANSLNYQVYTDAARSSIWGDGSSGTSFITDGYLLQVL Sbjct: 79 MAYTVKLSSGNSGALSQRKMLSGANSLNYQVYTDAARSSIWGDGSSGTSFITDGYLLQVL 138 Query: 121 TPVVKHYTVYGRVPGSQNVKAGSYLDTLTILITY 154 TPVVKHYTVYGRVPGSQNVKAGSYLDTLTILITY Sbjct: 139 TPVVKHYTVYGRVPGSQNVKAGSYLDTLTILITY 172 >ref|YP_003544153.1| putative secreted pili protein [Sphingobium japonicum UT26S] dbj|BAI95541.1| putative secreted pili protein [Sphingobium japonicum UT26S] Length = 161 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 2/132 (1%) Query: 23 CSASSSPVSFGLYDPQSSATIDNAGSISVTCQATVSLLMAYTVKLSSGNSGALSQRKMLS 82 C+ ++S VSFG Y+P SS D G++ V C ++L ++TV LS+G SGA SQR++ Sbjct: 32 CTVTASGVSFGNYNPLSSTPSDVTGTVQVNCTLLLALAGSFTVDLSAGGSGAFSQRRLRR 91 Query: 83 GANSLNYQVYTDAARSSIWGDGSSGTSFITDGYLLQVLTPVVKHYTVYGRVPGSQNVKAG 142 G +SL Y +YTDAAR+ IWGDG+ G++ +T + L TVY R+P QNV AG Sbjct: 92 GTDSLAYNLYTDAARTQIWGDGTGGSTRVTRNF--AALLNFTDTMTVYARLPARQNVSAG 149 Query: 143 SYLDTLTILITY 154 SY DT+ + +TY Sbjct: 150 SYSDTMIVTVTY 161 >ref|YP_003847357.1| Spore coat protein U [Gallionella capsiferriformans ES-2] gb|ADL55593.1| Spore coat protein U [Gallionella capsiferriformans ES-2] Length = 150 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 66/149 (44%), Positives = 97/149 (65%), Gaps = 2/149 (1%) Query: 6 ILALLLVAGTPAGAQQVCSASSSPVSFGLYDPQSSATIDNAGSISVTCQATVSLLMAYTV 65 IL++LL A T GA+ VC+ S + V++G Y P S A +D G+ISV C A +AYT+ Sbjct: 4 ILSVLL-ACTSCGAEAVCNISVTNVAYGAYTPASYAPLDGMGNISVACDAAQGQAIAYTI 62 Query: 66 KLSSGNSGALSQRKMLSGANSLNYQVYTDAARSSIWGDGSSGTSFITDGYLLQVLTPVVK 125 L+SG+SGA RKM +NY Y DAAR+ IWGDG++G+ ++D Y V V+ Sbjct: 63 VLNSGSSGAYGARKMGYVGYVINYNNYLDAARTKIWGDGNAGSHILSDSY-SGVGGLNVR 121 Query: 126 HYTVYGRVPGSQNVKAGSYLDTLTILITY 154 +YTVYGR+ G+Q + AG+Y D++ + ++Y Sbjct: 122 NYTVYGRIFGNQAIPAGNYSDSIIVTLSY 150 >ref|YP_741621.1| spore coat U domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gb|ABI56131.1| Spore coat U domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 156 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/157 (41%), Positives = 91/157 (57%), Gaps = 4/157 (2%) Query: 1 MASAAILALLLVAGTPAGAQQ-VCSASSSPVSFGLYDPQSSATIDNAGSISVTCQATVSL 59 M A L+L LVA AQ CS S+ P++FG YDP + A +D A +SV+C + Sbjct: 1 MKRAIGLSLFLVAAGSGSAQAYTCSISADPLAFGQYDPITGAQVDGASEVSVSCSLLGLV 60 Query: 60 LMA--YTVKLSSGNSGALSQRKMLSGANSLNYQVYTDAARSSIWGDGSSGTSFITDGYLL 117 + Y + L G G+ R + S ++L+Y +Y D AR+ IWGDG+ T+ +TD Y L Sbjct: 61 SLLVSYEISLDPGTGGSYHPRALSSATDTLDYNLYVDTARTEIWGDGTDDTATVTDSYTL 120 Query: 118 QVLTPVVKHYTVYGRVPGSQNVKAGSYLDTLTILITY 154 VLT V ++Y VYGRV QNV AG Y DT+T + + Sbjct: 121 GVLT-VTRYYPVYGRVFADQNVAAGVYDDTITATVEF 156 >ref|YP_004753067.1| hypothetical protein CFU_2417 [Collimonas fungivorans Ter331] gb|AEK62244.1| hypothetical protein CFU_2417 [Collimonas fungivorans Ter331] Length = 162 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 63/142 (44%), Positives = 90/142 (63%), Gaps = 5/142 (3%) Query: 1 MASAAILALLLVAGTPAGAQQVCSASSSPVSFGLYDPQSSATIDNAGSISVTCQATVSLL 60 +A+A +LAL L A C+ +++ + F Y S D+ G I+VTC A V L Sbjct: 14 LAAAGVLALPLSA---HALLATCTVATTGIVFPAYASPGSTNSDSTGDIAVTCSALVLGL 70 Query: 61 MAYTVKLSSGNSGALSQRKMLSGANSLNYQVYTDAARSSIWGDGSSGTSFITDGYLLQVL 120 +YT+ +S+G +G + RK+ SGAN LNY ++TDAARS +WGDG++ T ++D Y++ V Sbjct: 71 GSYTISVSTG-AGTYANRKLTSGANFLNYNMFTDAARSIVWGDGTASTQTVSDSYVILV- 128 Query: 121 TPVVKHYTVYGRVPGSQNVKAG 142 P +HYT YGRVPGSQN AG Sbjct: 129 APTTRHYTSYGRVPGSQNKPAG 150 >ref|ZP_06843933.1| Spore coat U domain protein [Burkholderia sp. Ch1-1] gb|EFG68454.1| Spore coat U domain protein [Burkholderia sp. Ch1-1] Length = 153 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/155 (43%), Positives = 94/155 (60%), Gaps = 5/155 (3%) Query: 1 MASAAILALLLVAGTPAGAQQVCSASSSPVSFGLYDPQSSATIDNAGSISVTCQATVSLL 60 M A+L L + A A A C+ S+S V+FG Y+P ++A D GS+SVTC T S Sbjct: 3 MLKIAVLTLAISACASANADPTCTVSASGVAFGNYNPLANANADGTGSVSVTC--TGSAT 60 Query: 61 MAYTVKLSSGNSGALSQRKMLSGANSLNYQVYTDAARSSIWGDGSSGTSFITDGYLLQVL 120 + YT+ S+G SGA RK++SG+ +LNY VY D R++IWGDGSSGTS ++ G ++ Sbjct: 61 VTYTIGASTG-SGAYLARKLVSGSQTLNYNVYVDNTRTTIWGDGSSGTSLLS-GNVVATS 118 Query: 121 TPVVKHYTVYGRV-PGSQNVKAGSYLDTLTILITY 154 + TVYGR+ G GSY D LT+ +TY Sbjct: 119 GGAAQASTVYGRISSGQATASVGSYSDILTVTVTY 153 >ref|YP_002218478.1| Spore coat U domain-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] ref|YP_002424523.1| spore coat protein [Acidithiobacillus ferrooxidans ATCC 23270] gb|ACH82271.1| Spore coat U domain protein [Acidithiobacillus ferrooxidans ATCC 53993] gb|ACK80033.1| spore coat protein [Acidithiobacillus ferrooxidans ATCC 23270] gb|EGQ61100.1| spore coat protein [Acidithiobacillus sp. GGI-221] Length = 154 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/142 (39%), Positives = 92/142 (64%), Gaps = 5/142 (3%) Query: 16 PAGAQQVCSASSSPVSFGLYDPQSSATIDNAGSISVTCQATVSLLMAYTVKLSSG--NSG 73 P CS +++ V+FG Y P SA ++ G+++V+C AT+ LL +T+ L++G + G Sbjct: 15 PTAVDAACSVTATGVAFGTYVP--SAASNSTGTVTVSCSATLGLLFNWTIALNAGVNSGG 72 Query: 74 ALSQRKMLSGANSLNYQVYTDAARSSIWGDGSSGTSFITDGYLLQVL-TPVVKHYTVYGR 132 + S R+M SG + L+YQ+YTD+ +++WGDG+SGT+ ++ L+ L P TVYG+ Sbjct: 73 SFSNRRMASGNSYLSYQLYTDSGHTTVWGDGTSGTATVSGNCLISFLGIPCSGSATVYGQ 132 Query: 133 VPGSQNVKAGSYLDTLTILITY 154 +P QN G+Y DT+T+ +TY Sbjct: 133 IPALQNPSPGAYTDTITVTVTY 154 >ref|YP_246723.1| hypothetical protein RF_0707 [Rickettsia felis URRWXCal2] gb|AAY61558.1| unknown [Rickettsia felis URRWXCal2] Length = 193 Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 59/151 (39%), Positives = 91/151 (60%), Gaps = 5/151 (3%) Query: 3 SAAILALLLVAGTPAGAQQVCSASSSPVSFGLYDPQSSATIDNAGSISVTCQATVSLLMA 62 S A+ +L++ G C+ S V+FG ++ + A + + SVTC A +SLL++ Sbjct: 47 SLAMTMMLIIPGNATALLATCNPSVPTVNFGTFN--AGAVRTTSVTASVTCSALLSLLVS 104 Query: 63 YTVKLSSGNSGALSQRKMLSGANSLNYQVYTDAARSSIWGDGSSGTSFITDGYLLQVLTP 122 YTV S+G++G + R M++G LNY +Y DAA + I G+G+S T +T YLL L P Sbjct: 105 YTVTFSTGSAGIYNPRNMVNGVRKLNYNLYKDAAFTQILGNGTSST--VTYSYLLG-LGP 161 Query: 123 VVKHYTVYGRVPGSQNVKAGSYLDTLTILIT 153 V K+YTVY R+P AG++ DT+T+ +T Sbjct: 162 VTKNYTVYARLPSQPLAAAGTFQDTITVTVT 192 >ref|YP_357467.1| putative lipoprotein [Pelobacter carbinolicus DSM 2380] gb|ABA89297.1| putative lipoprotein [Pelobacter carbinolicus DSM 2380] Length = 175 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 84/134 (62%), Gaps = 6/134 (4%) Query: 23 CSASSSPVSFGLYDPQSSATIDNAGSISVTCQATVSLLMAYTVKLSSGNSGALSQRKM-- 80 C +++PVSFG YD SS ++D G ISV+C M T+ +S G + + S R+M Sbjct: 46 CEVTTTPVSFGAYDVFSSFSLDTTGRISVSCNNPEKKRMPVTISISRGAANSFSPRQMRR 105 Query: 81 LSGANSLNYQVYTDAARSSIWGDGSSGTSFITDGYLLQVLTPVVKHYTVYGRVPGSQNVK 140 + G++ ++Y ++ DA+R+++WGDG+ G+S T ++ +P+ + +YGR+P QN++ Sbjct: 106 IGGSDRMDYYLFVDASRTAVWGDGTGGSS--TYVGMIDRTSPL--NVPIYGRIPARQNLR 161 Query: 141 AGSYLDTLTILITY 154 AGSY D L + I + Sbjct: 162 AGSYQDILVVTIDW 175 >ref|YP_554955.1| putative lipoprotein [Burkholderia xenovorans LB400] gb|ABE35605.1| putative lipoprotein [Burkholderia xenovorans LB400] Length = 122 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/126 (46%), Positives = 80/126 (63%), Gaps = 5/126 (3%) Query: 30 VSFGLYDPQSSATIDNAGSISVTCQATVSLLMAYTVKLSSGNSGALSQRKMLSGANSLNY 89 ++FG Y+P ++A D GS+SVTC T S + YT+ S+G SGA RK++SG +LNY Sbjct: 1 MAFGNYNPLANANADGTGSVSVTC--TGSATVTYTIGASTG-SGAYLARKLVSGGQTLNY 57 Query: 90 QVYTDAARSSIWGDGSSGTSFITDGYLLQVLTPVVKHYTVYGRVPGSQ-NVKAGSYLDTL 148 VY D R++IWGDGSSGT I+ G ++ + TVYGR+ +Q GSY DTL Sbjct: 58 NVYVDNTRTTIWGDGSSGTRLIS-GNVVATSGGATQASTVYGRISSAQATASVGSYSDTL 116 Query: 149 TILITY 154 T+ +TY Sbjct: 117 TVTVTY 122