BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0353.p (249 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775214.1| short-chain dehydrogenase [Herbaspirillum se... 332 3e-89 ref|ZP_08486671.1| short-chain dehydrogenase/reductase SDR [Meth... 233 3e-59 ref|YP_547102.1| short-chain dehydrogenase/reductase SDR [Polaro... 226 3e-57 ref|YP_004753205.1| Short-chain dehydrogenase/reductase SDR [Col... 226 3e-57 ref|ZP_05718567.1| oxidoreductase, short-chain dehydrogenase/red... 222 5e-56 ref|ZP_06638882.1| 3-oxoacyl-(acyl-carrier-protein) reductase [S... 221 9e-56 ref|YP_002946802.1| short-chain dehydrogenase/reductase SDR [Var... 221 9e-56 ref|YP_001611778.1| Short chain dehydrogenase [Sorangium cellulo... 220 2e-55 ref|ZP_06877845.1| short chain dehydrogenase [Pseudomonas aerugi... 220 2e-55 dbj|GAA18830.1| probable short chain dehydrogenase [Pseudomonas ... 219 2e-55 >ref|YP_003775214.1| short-chain dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ63306.1| short-chain dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 251 Score = 332 bits (851), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 167/175 (95%), Positives = 170/175 (97%) Query: 1 MADKVILVTGGSRGIGAATALLAGQRGYAVAVNYVTNRAAADAVVAQIQAAGGRAIAVGG 60 MADKVILVTGGSRGIGAATALLAGQRGYAVAVNYVTNRAAADAVVAQIQAAGGRAIAVGG Sbjct: 3 MADKVILVTGGSRGIGAATALLAGQRGYAVAVNYVTNRAAADAVVAQIQAAGGRAIAVGG 62 Query: 61 DVAREEDVLQLFATVDGELGRVTALVNNAGVLDHQSRLEDMSAERINRVLIANVTGSLLC 120 DVAREEDVLQLFATVDGELGRVTALVNNAGVLDHQSRLEDMSAERINRVLIANVTGSLLC Sbjct: 63 DVAREEDVLQLFATVDGELGRVTALVNNAGVLDHQSRLEDMSAERINRVLIANVTGSLLC 122 Query: 121 AREAVKRMSTRHGGQGGAIVNLSSMAAKLGGPGEYVDYAASKGAIDALPLAWPRK 175 AREAVKRMSTRHGGQGGAIVNLSSMAAKLGGPGEYVDYAASKGAIDA + ++ Sbjct: 123 AREAVKRMSTRHGGQGGAIVNLSSMAAKLGGPGEYVDYAASKGAIDAFTIGLAKE 177 >ref|ZP_08486671.1| short-chain dehydrogenase/reductase SDR [Methylomicrobium album BG8] gb|EGL02420.1| short-chain dehydrogenase/reductase SDR [Methylomicrobium album BG8] Length = 248 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 114/172 (66%), Positives = 139/172 (80%) Query: 4 KVILVTGGSRGIGAATALLAGQRGYAVAVNYVTNRAAADAVVAQIQAAGGRAIAVGGDVA 63 KV++VTGGSRGIGA TALLA RGY V +NY N+AAADAVV QI++AGG+AIAV DV+ Sbjct: 3 KVLVVTGGSRGIGAETALLAAARGYVVCINYYKNKAAADAVVDQIKSAGGKAIAVAADVS 62 Query: 64 REEDVLQLFATVDGELGRVTALVNNAGVLDHQSRLEDMSAERINRVLIANVTGSLLCARE 123 RE DV LF TVD +LG+++ALVNNAG+L+ Q R+ED+ R++RV ANV GS LCARE Sbjct: 63 RESDVKDLFKTVDEKLGQISALVNNAGILEKQIRVEDIDEVRLHRVFAANVFGSFLCARE 122 Query: 124 AVKRMSTRHGGQGGAIVNLSSMAAKLGGPGEYVDYAASKGAIDALPLAWPRK 175 AV+RMST+HGG GGAIVN+SS A++LG GEYVDYAASKGAID L + R+ Sbjct: 123 AVRRMSTKHGGYGGAIVNVSSAASRLGSAGEYVDYAASKGAIDTLTIGLSRE 174 >ref|YP_547102.1| short-chain dehydrogenase/reductase SDR [Polaromonas sp. JS666] gb|ABE42204.1| short-chain dehydrogenase/reductase SDR [Polaromonas sp. JS666] Length = 248 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 110/172 (63%), Positives = 141/172 (81%) Query: 4 KVILVTGGSRGIGAATALLAGQRGYAVAVNYVTNRAAADAVVAQIQAAGGRAIAVGGDVA 63 KV+L+TGGSRGIGAA+ALLA ++GYAVAVNY +N AAAD VV QI+ AGG+A+AV DVA Sbjct: 3 KVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALAVQADVA 62 Query: 64 REEDVLQLFATVDGELGRVTALVNNAGVLDHQSRLEDMSAERINRVLIANVTGSLLCARE 123 +E +VL +F TVD +LGR++ALVNNAGV+D +R++ ++ ER+ R+ NV GS LCARE Sbjct: 63 KEREVLAMFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRMFEINVFGSFLCARE 122 Query: 124 AVKRMSTRHGGQGGAIVNLSSMAAKLGGPGEYVDYAASKGAIDALPLAWPRK 175 AVKRMSTR+GG GG+IVN+SS AA+LG PG+YVDYAA+KGAID L ++ Sbjct: 123 AVKRMSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKE 174 >ref|YP_004753205.1| Short-chain dehydrogenase/reductase SDR [Collimonas fungivorans Ter331] gb|AEK62382.1| Short-chain dehydrogenase/reductase SDR precursor [Collimonas fungivorans Ter331] Length = 273 Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 118/175 (67%), Positives = 141/175 (80%) Query: 1 MADKVILVTGGSRGIGAATALLAGQRGYAVAVNYVTNRAAADAVVAQIQAAGGRAIAVGG 60 M+ +VI++TG SRGIGAATA LA RGYAV VNYV NR+AA+ VV I+ AGG A+AV G Sbjct: 25 MSKQVIVITGASRGIGAATAHLAAARGYAVCVNYVHNRSAAEQVVDAIRQAGGEALAVAG 84 Query: 61 DVAREEDVLQLFATVDGELGRVTALVNNAGVLDHQSRLEDMSAERINRVLIANVTGSLLC 120 DVA E DVL+LF TVD +LG++TALVNNAG+L+ Q R+E+M R+ RV N+ GS LC Sbjct: 85 DVAVEADVLKLFQTVDAQLGKLTALVNNAGILERQMRVEEMDVARLQRVFATNIVGSFLC 144 Query: 121 AREAVKRMSTRHGGQGGAIVNLSSMAAKLGGPGEYVDYAASKGAIDALPLAWPRK 175 AREAV+RMST GGQGGAIVNLSSMAAKLGGPGEYVDYAASKGAIDA+ + ++ Sbjct: 145 AREAVRRMSTSLGGQGGAIVNLSSMAAKLGGPGEYVDYAASKGAIDAMTVGLAKE 199 >ref|ZP_05718567.1| oxidoreductase, short-chain dehydrogenase/reductase family [Vibrio mimicus VM573] gb|EEW08896.1| oxidoreductase, short-chain dehydrogenase/reductase family [Vibrio mimicus VM573] gb|EGU18053.1| short chain dehydrogenase/reductase family oxidoreductase [Vibrio mimicus SX-4] Length = 250 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 108/165 (65%), Positives = 131/165 (79%) Query: 4 KVILVTGGSRGIGAATALLAGQRGYAVAVNYVTNRAAADAVVAQIQAAGGRAIAVGGDVA 63 KV+++TGGSRGIGAATA L Q G++V +NY +N AA+A+V +I+A GG I+V DV+ Sbjct: 5 KVVVITGGSRGIGAATAKLFAQNGFSVCINYKSNTEAAEALVKEIKALGGHCISVQADVS 64 Query: 64 REEDVLQLFATVDGELGRVTALVNNAGVLDHQSRLEDMSAERINRVLIANVTGSLLCARE 123 +E DVLQLF TVD ELG V+ LVNNAG+L Q RLE+MSA+RIN +L+ NVTG LC RE Sbjct: 65 KESDVLQLFETVDRELGAVSVLVNNAGILKKQMRLEEMSADRINSILVNNVTGYFLCCRE 124 Query: 124 AVKRMSTRHGGQGGAIVNLSSMAAKLGGPGEYVDYAASKGAIDAL 168 AVKRMSTRHGG GG IVN+SS AA+ G P EY+DYAASKGAID L Sbjct: 125 AVKRMSTRHGGLGGVIVNVSSGAARTGSPNEYIDYAASKGAIDTL 169 >ref|ZP_06638882.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Serratia odorifera DSM 4582] gb|EFE96132.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Serratia odorifera DSM 4582] Length = 248 Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 112/165 (67%), Positives = 132/165 (80%) Query: 4 KVILVTGGSRGIGAATALLAGQRGYAVAVNYVTNRAAADAVVAQIQAAGGRAIAVGGDVA 63 KV L+TG SRGIG ATALL ++GYAV VNY TN AAA VV Q+ AAGGRA+A+ D+A Sbjct: 3 KVALITGASRGIGRATALLLARQGYAVGVNYQTNEAAAQQVVNQVLAAGGRALALQADIA 62 Query: 64 REEDVLQLFATVDGELGRVTALVNNAGVLDHQSRLEDMSAERINRVLIANVTGSLLCARE 123 +E +V+ +F+ +D ELG + ALVNNAG+L Q+ +E MSAERINRVL NVTGS LC RE Sbjct: 63 QENEVVAMFSRLDAELGTLCALVNNAGILFQQTSIEHMSAERINRVLATNVTGSFLCCRE 122 Query: 124 AVKRMSTRHGGQGGAIVNLSSMAAKLGGPGEYVDYAASKGAIDAL 168 AVKRM+ RHGGQGGAIVN+SS AA+LG PGEYVDYAASKGA D L Sbjct: 123 AVKRMALRHGGQGGAIVNVSSGAARLGSPGEYVDYAASKGAQDTL 167 >ref|YP_002946802.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110] gb|ACS21536.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110] Length = 248 Score = 221 bits (562), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 111/173 (64%), Positives = 133/173 (76%) Query: 3 DKVILVTGGSRGIGAATALLAGQRGYAVAVNYVTNRAAADAVVAQIQAAGGRAIAVGGDV 62 D+V+L+TGG RGIGAATALLA QRGYAVAVNY N AAD VV I+A GG A+AV DV Sbjct: 2 DQVLLITGGGRGIGAATALLAAQRGYAVAVNYANNSLAADEVVRAIRAGGGSAMAVQADV 61 Query: 63 AREEDVLQLFATVDGELGRVTALVNNAGVLDHQSRLEDMSAERINRVLIANVTGSLLCAR 122 E VL +F VD LGR+TALVNNAGV+D Q+R+++MS R+ R+ NV GS LCAR Sbjct: 62 GDEAQVLAMFEKVDARLGRLTALVNNAGVVDVQARVDEMSVARLERMFRINVIGSFLCAR 121 Query: 123 EAVKRMSTRHGGQGGAIVNLSSMAAKLGGPGEYVDYAASKGAIDALPLAWPRK 175 EAV+RMSTRHGG GGAIVN+SS AA+LG PG+YVDYAA+KGAID + ++ Sbjct: 122 EAVRRMSTRHGGSGGAIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTIGLAKE 174 >ref|YP_001611778.1| Short chain dehydrogenase [Sorangium cellulosum 'So ce 56'] emb|CAN91298.1| Short chain dehydrogenase [Sorangium cellulosum 'So ce 56'] Length = 248 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 111/175 (63%), Positives = 140/175 (80%), Gaps = 1/175 (0%) Query: 1 MADKVILVTGGSRGIGAATALLAGQRGYAVAVNYVTNRAAADAVVAQIQAAGGRAIAVGG 60 MAD ++L+TGGSRGIGAATALLA RGY VAV+Y+ + AA VV +I+A GG A+A+ Sbjct: 1 MAD-IMLITGGSRGIGAATALLAASRGYTVAVSYLRDEGAAARVVDEIRAHGGAALAIAA 59 Query: 61 DVAREEDVLQLFATVDGELGRVTALVNNAGVLDHQSRLEDMSAERINRVLIANVTGSLLC 120 DV+REEDV++LF TVD +LG + ALVNNAGVLD Q+RLEDM+A R+ R+L NV GS LC Sbjct: 60 DVSREEDVVRLFQTVDRDLGPIAALVNNAGVLDRQARLEDMTAARVERILSTNVVGSFLC 119 Query: 121 AREAVKRMSTRHGGQGGAIVNLSSMAAKLGGPGEYVDYAASKGAIDALPLAWPRK 175 AREAV+RMST GG+GGAIVN+SS A++LG PGEY+DYAASK A+D L + ++ Sbjct: 120 AREAVRRMSTLRGGRGGAIVNVSSRASQLGSPGEYIDYAASKAAVDTLTIGLAKE 174 >ref|ZP_06877845.1| short chain dehydrogenase [Pseudomonas aeruginosa PAb1] ref|ZP_07794455.1| putative short-chain dehydrogenase [Pseudomonas aeruginosa 39016] gb|EFQ39551.1| putative short-chain dehydrogenase [Pseudomonas aeruginosa 39016] gb|EGM15343.1| short chain dehydrogenase [Pseudomonas aeruginosa 152504] dbj|BAK91082.1| short chain dehydrogenase [Pseudomonas aeruginosa NCGM2.S1] Length = 248 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 106/172 (61%), Positives = 137/172 (79%) Query: 4 KVILVTGGSRGIGAATALLAGQRGYAVAVNYVTNRAAADAVVAQIQAAGGRAIAVGGDVA 63 V+L+TG SRGIGAATALLA +RGYAV +NY+ NR AA+A+ +I+ GG A+AV DVA Sbjct: 3 NVMLITGASRGIGAATALLAAERGYAVVLNYLRNREAAEALRQRIERQGGEALAVAADVA 62 Query: 64 REEDVLQLFATVDGELGRVTALVNNAGVLDHQSRLEDMSAERINRVLIANVTGSLLCARE 123 E DV +LFA +D GR+ LVNNAGVL+ Q+RLE++ A R++RV NVTGS LCARE Sbjct: 63 EEGDVERLFAAIDERFGRLDVLVNNAGVLEAQTRLENIDAARLHRVFATNVTGSFLCARE 122 Query: 124 AVKRMSTRHGGQGGAIVNLSSMAAKLGGPGEYVDYAASKGAIDALPLAWPRK 175 AVKR+STRHGG+GG+IVN+SSMA++LG P EY+DYAA+KGAID++ + R+ Sbjct: 123 AVKRLSTRHGGRGGSIVNVSSMASRLGSPNEYIDYAAAKGAIDSMTIGLARE 174 >dbj|GAA18830.1| probable short chain dehydrogenase [Pseudomonas aeruginosa NCMG1179] Length = 248 Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 106/172 (61%), Positives = 137/172 (79%) Query: 4 KVILVTGGSRGIGAATALLAGQRGYAVAVNYVTNRAAADAVVAQIQAAGGRAIAVGGDVA 63 V+L+TG SRGIGAATALLA +RGYAV +NY+ NR AA+A+ +I+ GG A+AV DVA Sbjct: 3 NVMLITGASRGIGAATALLAAERGYAVVLNYLRNREAAEALHQRIERQGGEALAVAADVA 62 Query: 64 REEDVLQLFATVDGELGRVTALVNNAGVLDHQSRLEDMSAERINRVLIANVTGSLLCARE 123 E DV +LFA +D GR+ LVNNAGVL+ Q+RLE++ A R++RV NVTGS LCARE Sbjct: 63 EEGDVERLFAAIDERFGRLDVLVNNAGVLEAQTRLENIDAARLHRVFATNVTGSFLCARE 122 Query: 124 AVKRMSTRHGGQGGAIVNLSSMAAKLGGPGEYVDYAASKGAIDALPLAWPRK 175 AVKR+STRHGG+GG+IVN+SSMA++LG P EY+DYAA+KGAID++ + R+ Sbjct: 123 AVKRLSTRHGGRGGSIVNVSSMASRLGSPNEYIDYAAAKGAIDSMTIGLARE 174