BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0346.p (215 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775208.1| branched-chain amino acid ABC transporter AT... 415 e-114 ref|YP_004752463.1| putative ABC transporter [Collimonas fungivo... 369 e-100 ref|ZP_08273443.1| Branched-chain amino acid transport ATP-bindi... 366 1e-99 ref|YP_001155142.1| ABC transporter related [Polynucleobacter ne... 363 7e-99 ref|ZP_06684870.1| branched-chain amino acid ABC superfamily ATP... 347 7e-94 gb|EFV81969.1| ABC transporter like protein [Achromobacter xylos... 343 1e-92 ref|YP_003982193.1| ABC transporter [Achromobacter xylosoxidans ... 342 2e-92 ref|YP_983736.1| ABC transporter-like protein [Polaromonas napht... 338 2e-91 ref|YP_001894555.1| brcnahed-chain amino acid ABC transporter AT... 336 2e-90 ref|YP_523092.1| ABC transporter-like protein [Rhodoferax ferrir... 335 2e-90 >ref|YP_003775208.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ63300.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 242 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 11 AGKTTTMRAISGMIKPKGGEVTLGGKNITGLDSHKIARFGLAHSPEGRRVFATMSVTDNL 70 AGKTTTMRAISGMIKPKGGEVTLGGKNITGLDSHKIARFGLAHSPEGRRVFATMSVTDNL Sbjct: 38 AGKTTTMRAISGMIKPKGGEVTLGGKNITGLDSHKIARFGLAHSPEGRRVFATMSVTDNL 97 Query: 71 LLGAFPRFTRARPKGDIAHDLERALELFPRLKERQSQLAGTLSGGEQQMLAMARAVMLNP 130 LLGAFPRFTRARPKGDIAHDLERALELFPRLKERQSQLAGTLSGGEQQMLAMARAVMLNP Sbjct: 98 LLGAFPRFTRARPKGDIAHDLERALELFPRLKERQSQLAGTLSGGEQQMLAMARAVMLNP 157 Query: 131 EVILLDEPSMGLAPILVDEVFRIIVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKIS 190 EVILLDEPSMGLAPILVDEVFRIIVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKIS Sbjct: 158 EVILLDEPSMGLAPILVDEVFRIIVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKIS 217 Query: 191 VHGPADKLQNDPAVKAAYLGGGAHH 215 VHGPADKLQNDPAVKAAYLGGGAHH Sbjct: 218 VHGPADKLQNDPAVKAAYLGGGAHH 242 >ref|YP_004752463.1| putative ABC transporter [Collimonas fungivorans Ter331] gb|AEK61640.1| putative ABC transporter [Collimonas fungivorans Ter331] Length = 262 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 182/204 (89%), Positives = 192/204 (94%) Query: 11 AGKTTTMRAISGMIKPKGGEVTLGGKNITGLDSHKIARFGLAHSPEGRRVFATMSVTDNL 70 AGKTTTMRAISGMIK K G VTL G ++TGL SHKIAR GLAHSPEGRRVFATMSV DNL Sbjct: 59 AGKTTTMRAISGMIKAKAGSVTLAGVDVTGLASHKIARAGLAHSPEGRRVFATMSVVDNL 118 Query: 71 LLGAFPRFTRARPKGDIAHDLERALELFPRLKERQSQLAGTLSGGEQQMLAMARAVMLNP 130 LLGAFPRFTR RP+GDI HDLE+ALELFPRLKER+SQLAGTLSGGEQQMLAMARA+MLNP Sbjct: 119 LLGAFPRFTRLRPRGDIKHDLEQALELFPRLKERRSQLAGTLSGGEQQMLAMARAIMLNP 178 Query: 131 EVILLDEPSMGLAPILVDEVFRIIVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKIS 190 EVILLDEPSMGLAPILV+EVFRII RLKEQGVTMLLVEQFAAAALNVADYGYVLENG+IS Sbjct: 179 EVILLDEPSMGLAPILVEEVFRIISRLKEQGVTMLLVEQFAAAALNVADYGYVLENGRIS 238 Query: 191 VHGPADKLQNDPAVKAAYLGGGAH 214 VHGPA+KL+NDPAVKAAYLGGG H Sbjct: 239 VHGPAEKLKNDPAVKAAYLGGGQH 262 >ref|ZP_08273443.1| Branched-chain amino acid transport ATP-binding protein livF [Oxalobacteraceae bacterium IMCC9480] gb|EGF33106.1| Branched-chain amino acid transport ATP-binding protein livF [Oxalobacteraceae bacterium IMCC9480] Length = 242 Score = 366 bits (939), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 177/205 (86%), Positives = 194/205 (94%) Query: 11 AGKTTTMRAISGMIKPKGGEVTLGGKNITGLDSHKIARFGLAHSPEGRRVFATMSVTDNL 70 AGKTTTMRAISGMIKPK G V L GK++TGL+SH+IAR GLAHSPEGRRVF+TMS+TDNL Sbjct: 38 AGKTTTMRAISGMIKPKSGSVMLAGKDVTGLESHRIARAGLAHSPEGRRVFSTMSITDNL 97 Query: 71 LLGAFPRFTRARPKGDIAHDLERALELFPRLKERQSQLAGTLSGGEQQMLAMARAVMLNP 130 LLGAFPR+T ARP+GDI DLE+ALELFPRLKERQ QLAGTLSGGEQQMLAMARAVMLNP Sbjct: 98 LLGAFPRYTGARPRGDIKEDLEKALELFPRLKERQHQLAGTLSGGEQQMLAMARAVMLNP 157 Query: 131 EVILLDEPSMGLAPILVDEVFRIIVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKIS 190 EVILLDEPSMGLAPILV+EVFRII+RLKE+GVTMLLVEQFAAAALNVADYGYV+ENG+IS Sbjct: 158 EVILLDEPSMGLAPILVEEVFRIILRLKERGVTMLLVEQFAAAALNVADYGYVMENGRIS 217 Query: 191 VHGPADKLQNDPAVKAAYLGGGAHH 215 VHGPA+KL+NDPAV+AAYLGGG H Sbjct: 218 VHGPANKLKNDPAVQAAYLGGGQQH 242 >ref|YP_001155142.1| ABC transporter related [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gb|ABP33578.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT family [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 242 Score = 363 bits (933), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 176/205 (85%), Positives = 188/205 (91%) Query: 11 AGKTTTMRAISGMIKPKGGEVTLGGKNITGLDSHKIARFGLAHSPEGRRVFATMSVTDNL 70 AGKTTTMRAI+GMIKP GGEVTL G+ I G DSHKIAR GLAHSPEGRRVF TMSVTDNL Sbjct: 38 AGKTTTMRAITGMIKPTGGEVTLSGEKINGYDSHKIARLGLAHSPEGRRVFTTMSVTDNL 97 Query: 71 LLGAFPRFTRARPKGDIAHDLERALELFPRLKERQSQLAGTLSGGEQQMLAMARAVMLNP 130 LLGAFPRFT +RPKGDI HDLE+ALE+FPRLKERQ QLAGTLSGGEQQMLAMARAVMLNP Sbjct: 98 LLGAFPRFTGSRPKGDIKHDLEKALEMFPRLKERQYQLAGTLSGGEQQMLAMARAVMLNP 157 Query: 131 EVILLDEPSMGLAPILVDEVFRIIVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKIS 190 E+ILLDEPSMGLAPILV+EVF+II LK QGVTMLLVEQFAAAALNVADYGYVLENGKI+ Sbjct: 158 EIILLDEPSMGLAPILVEEVFKIISNLKSQGVTMLLVEQFAAAALNVADYGYVLENGKIA 217 Query: 191 VHGPADKLQNDPAVKAAYLGGGAHH 215 HGPA KL++DPAVKAAYLGG + H Sbjct: 218 THGPASKLKDDPAVKAAYLGGASSH 242 >ref|ZP_06684870.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] gb|EFF78221.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] Length = 241 Score = 347 bits (890), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 169/206 (82%), Positives = 187/206 (90%) Query: 9 QSAGKTTTMRAISGMIKPKGGEVTLGGKNITGLDSHKIARFGLAHSPEGRRVFATMSVTD 68 AGKTTTMRA+SGMI+P GEVTLGGK I GL+SH+IAR GLAHSPEGRRVF T+SVTD Sbjct: 36 NGAGKTTTMRALSGMIRPTAGEVTLGGKRIDGLESHRIARLGLAHSPEGRRVFPTLSVTD 95 Query: 69 NLLLGAFPRFTRARPKGDIAHDLERALELFPRLKERQSQLAGTLSGGEQQMLAMARAVML 128 NLLLGAFPR T +RPKGD+ DL RA++LFPRLKER+ QLAGTLSGGEQQMLAMARAVML Sbjct: 96 NLLLGAFPRLTGSRPKGDVQADLGRAMDLFPRLKERRDQLAGTLSGGEQQMLAMARAVML 155 Query: 129 NPEVILLDEPSMGLAPILVDEVFRIIVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGK 188 NPE++LLDEPSMGLAPILV+EVFRII RLK++GVTMLLVEQFAAAAL VADYGYVLENG+ Sbjct: 156 NPELVLLDEPSMGLAPILVEEVFRIIARLKDEGVTMLLVEQFAAAALQVADYGYVLENGR 215 Query: 189 ISVHGPADKLQNDPAVKAAYLGGGAH 214 ISVHG ADKL++DPAV AAYLGGG H Sbjct: 216 ISVHGSADKLRDDPAVVAAYLGGGGH 241 >gb|EFV81969.1| ABC transporter like protein [Achromobacter xylosoxidans C54] gb|EGP46932.1| ABC transporter family protein 99 [Achromobacter xylosoxidans AXX-A] Length = 240 Score = 343 bits (879), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 167/201 (83%), Positives = 186/201 (92%) Query: 11 AGKTTTMRAISGMIKPKGGEVTLGGKNITGLDSHKIARFGLAHSPEGRRVFATMSVTDNL 70 AGKTTTMRA+SGMI+P GEVTLGGK I GL+SH+IAR GLAHSPEGRRVF T+SVTDNL Sbjct: 38 AGKTTTMRALSGMIRPTAGEVTLGGKRIDGLESHRIARLGLAHSPEGRRVFPTLSVTDNL 97 Query: 71 LLGAFPRFTRARPKGDIAHDLERALELFPRLKERQSQLAGTLSGGEQQMLAMARAVMLNP 130 LLGAFPR T +RPKGD+ DL RA++LFPRLKER+ QLAGTLSGGEQQMLAMARAVMLNP Sbjct: 98 LLGAFPRLTGSRPKGDVQADLGRAMDLFPRLKERREQLAGTLSGGEQQMLAMARAVMLNP 157 Query: 131 EVILLDEPSMGLAPILVDEVFRIIVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKIS 190 E++LLDEPSMGLAPILV+EVFRII RLK++GVTMLLVEQFAAAALNVADYGYVLENG+IS Sbjct: 158 ELVLLDEPSMGLAPILVEEVFRIIARLKDEGVTMLLVEQFAAAALNVADYGYVLENGRIS 217 Query: 191 VHGPADKLQNDPAVKAAYLGG 211 VHG A+KL++DPAV AAYLGG Sbjct: 218 VHGSAEKLKHDPAVVAAYLGG 238 >ref|YP_003982193.1| ABC transporter [Achromobacter xylosoxidans A8] gb|ADP19478.1| ABC transporter family protein 99 [Achromobacter xylosoxidans A8] Length = 240 Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 167/201 (83%), Positives = 185/201 (92%) Query: 11 AGKTTTMRAISGMIKPKGGEVTLGGKNITGLDSHKIARFGLAHSPEGRRVFATMSVTDNL 70 AGKTTTMRA+SGMI+P GEVTL GK I GL+SH+IAR GLAHSPEGRRVF T+SVTDNL Sbjct: 38 AGKTTTMRALSGMIRPTAGEVTLSGKRIDGLESHRIARLGLAHSPEGRRVFPTLSVTDNL 97 Query: 71 LLGAFPRFTRARPKGDIAHDLERALELFPRLKERQSQLAGTLSGGEQQMLAMARAVMLNP 130 LLGAFPR T +RPKGD+ DL RA++LFPRLKER+ QLAGTLSGGEQQMLAMARAVMLNP Sbjct: 98 LLGAFPRLTGSRPKGDVQSDLGRAMDLFPRLKERRDQLAGTLSGGEQQMLAMARAVMLNP 157 Query: 131 EVILLDEPSMGLAPILVDEVFRIIVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKIS 190 E++LLDEPSMGLAPILV+EVFRII RLK++GVTMLLVEQFAAAALNVADYGYVLENG+IS Sbjct: 158 ELVLLDEPSMGLAPILVEEVFRIIARLKDEGVTMLLVEQFAAAALNVADYGYVLENGRIS 217 Query: 191 VHGPADKLQNDPAVKAAYLGG 211 VHG ADKL++DPAV AAYLGG Sbjct: 218 VHGSADKLKHDPAVVAAYLGG 238 >ref|YP_983736.1| ABC transporter-like protein [Polaromonas naphthalenivorans CJ2] gb|ABM38815.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 240 Score = 338 bits (868), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 166/202 (82%), Positives = 184/202 (91%) Query: 11 AGKTTTMRAISGMIKPKGGEVTLGGKNITGLDSHKIARFGLAHSPEGRRVFATMSVTDNL 70 AGKTTTMRAISGMIKP G++ L GK I GL+S+ IA+ GLAHSPEGRRVFATMSVTDNL Sbjct: 38 AGKTTTMRAISGMIKPTAGQINLHGKRIDGLESYTIAKQGLAHSPEGRRVFATMSVTDNL 97 Query: 71 LLGAFPRFTRARPKGDIAHDLERALELFPRLKERQSQLAGTLSGGEQQMLAMARAVMLNP 130 +LGAFPR T +RPKGD+ DLERA+ELFPRLKER+ QLAGTLSGGEQQMLAMARAVMLNP Sbjct: 98 ILGAFPRLTGSRPKGDVQGDLERAMELFPRLKERRMQLAGTLSGGEQQMLAMARAVMLNP 157 Query: 131 EVILLDEPSMGLAPILVDEVFRIIVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKIS 190 E++LLDEPSMGLAPILV+EVFRII LK +GVTMLLVEQFAAAAL VADYGYVLENG+IS Sbjct: 158 EIVLLDEPSMGLAPILVEEVFRIIADLKSRGVTMLLVEQFAAAALKVADYGYVLENGRIS 217 Query: 191 VHGPADKLQNDPAVKAAYLGGG 212 VHG ADKL++DPAV+AAYLGGG Sbjct: 218 VHGEADKLRDDPAVRAAYLGGG 239 >ref|YP_001894555.1| brcnahed-chain amino acid ABC transporter ATPase [Burkholderia phytofirmans PsJN] gb|ACD15331.1| ABC transporter related [Burkholderia phytofirmans PsJN] Length = 244 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 162/204 (79%), Positives = 183/204 (89%), Gaps = 4/204 (1%) Query: 11 AGKTTTMRAISGMIKPKGGEVTLG----GKNITGLDSHKIARFGLAHSPEGRRVFATMSV 66 AGKTTTMRAISGMI+P GE+T+G K I LDSH+IAR GLAHSPEGRRVFATMSV Sbjct: 38 AGKTTTMRAISGMIRPSAGEITMGVGTDAKRIDALDSHRIARLGLAHSPEGRRVFATMSV 97 Query: 67 TDNLLLGAFPRFTRARPKGDIAHDLERALELFPRLKERQSQLAGTLSGGEQQMLAMARAV 126 TDNL+LGAFPR T ARP+GD+ DLERA+E+FPRLKER+ QLAGTLSGGEQQMLAMARA+ Sbjct: 98 TDNLILGAFPRLTSARPRGDVKADLERAIEMFPRLKERRHQLAGTLSGGEQQMLAMARAI 157 Query: 127 MLNPEVILLDEPSMGLAPILVDEVFRIIVRLKEQGVTMLLVEQFAAAALNVADYGYVLEN 186 M+NP+++LLDEPSMGLAPILV+EVFRII LK QGVTMLLVEQFAAAALNVADYGYVLEN Sbjct: 158 MMNPDLVLLDEPSMGLAPILVEEVFRIIGNLKSQGVTMLLVEQFAAAALNVADYGYVLEN 217 Query: 187 GKISVHGPADKLQNDPAVKAAYLG 210 G+I+ HGPA +L+NDP+VKAAYLG Sbjct: 218 GRIAAHGPATELRNDPSVKAAYLG 241 >ref|YP_523092.1| ABC transporter-like protein [Rhodoferax ferrireducens T118] gb|ABD69561.1| ABC transporter related [Rhodoferax ferrireducens T118] Length = 238 Score = 335 bits (860), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 164/201 (81%), Positives = 182/201 (90%) Query: 11 AGKTTTMRAISGMIKPKGGEVTLGGKNITGLDSHKIARFGLAHSPEGRRVFATMSVTDNL 70 AGKTTTMRA+SGMIKP G++ L G++ITGLDSH+IAR GLAHSPEGRRVF T+SV DN+ Sbjct: 38 AGKTTTMRAVSGMIKPTSGQIMLSGQDITGLDSHQIARRGLAHSPEGRRVFPTLSVVDNI 97 Query: 71 LLGAFPRFTRARPKGDIAHDLERALELFPRLKERQSQLAGTLSGGEQQMLAMARAVMLNP 130 LGAF R+T ARPKGD+ D+++ALE+FPRLKER QLAGTLSGGEQQMLAMARAVMLNP Sbjct: 98 RLGAFVRYTNARPKGDVEGDVDKALEMFPRLKERTHQLAGTLSGGEQQMLAMARAVMLNP 157 Query: 131 EVILLDEPSMGLAPILVDEVFRIIVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKIS 190 EVILLDEPSMGLAPILV+EVF II RLK QGVTMLLVEQFAAAAL VADYGYVLENG+IS Sbjct: 158 EVILLDEPSMGLAPILVEEVFNIISRLKAQGVTMLLVEQFAAAALKVADYGYVLENGRIS 217 Query: 191 VHGPADKLQNDPAVKAAYLGG 211 VHGPA KL++DPAVKAAYLGG Sbjct: 218 VHGPAAKLKDDPAVKAAYLGG 238