BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0342.p (383 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775205.1| branched-chain amino acid ABC transporter pe... 778 0.0 ref|YP_004752460.1| ABC branched chain amino acid family transpo... 637 e-180 ref|YP_001894558.1| branched-chain amino acid ABC transporter pe... 585 e-165 ref|YP_557335.1| branched chain amino acid ABC transporter perip... 584 e-165 ref|ZP_03267004.1| Extracellular ligand-binding receptor [Burkho... 574 e-161 ref|YP_003609338.1| extracellular ligand-binding receptor [Burkh... 574 e-161 ref|YP_523095.1| extracellular ligand-binding receptor [Rhodofer... 563 e-158 gb|EGP46929.1| receptor family ligand binding region family prot... 548 e-154 gb|EFV81972.1| extracellular ligand-binding receptor [Achromobac... 547 e-153 ref|ZP_08273439.1| Extracellular ligand-binding receptor [Oxalob... 545 e-153 >ref|YP_003775205.1| branched-chain amino acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ63297.1| ABC-type branched-chain amino acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 383 Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/383 (100%), Positives = 383/383 (100%) Query: 1 MTYKTQAFVAAALMSLALTSQAADPIKIGVSGPYTGGSAPMGVSMRDGVKLAVAEINAAG 60 MTYKTQAFVAAALMSLALTSQAADPIKIGVSGPYTGGSAPMGVSMRDGVKLAVAEINAAG Sbjct: 1 MTYKTQAFVAAALMSLALTSQAADPIKIGVSGPYTGGSAPMGVSMRDGVKLAVAEINAAG 60 Query: 61 GLLGRQIQLIERDDEAKNERGVQIAQELINKEKVVATVGFINTGVALASQRFYQEAKIPV 120 GLLGRQIQLIERDDEAKNERGVQIAQELINKEKVVATVGFINTGVALASQRFYQEAKIPV Sbjct: 61 GLLGRQIQLIERDDEAKNERGVQIAQELINKEKVVATVGFINTGVALASQRFYQEAKIPV 120 Query: 121 INNVATGTVITKQFEKEKDNYVFRTSAADKIQAKMIADEAVDKQKFTKVAILADSTNYGQ 180 INNVATGTVITKQFEKEKDNYVFRTSAADKIQAKMIADEAVDKQKFTKVAILADSTNYGQ Sbjct: 121 INNVATGTVITKQFEKEKDNYVFRTSAADKIQAKMIADEAVDKQKFTKVAILADSTNYGQ 180 Query: 181 LGREDLEKVLADKKVTPVAVEKYNIKDVDMTAQLLKSKQGGAQAVLTYGIGPELAQIANG 240 LGREDLEKVLADKKVTPVAVEKYNIKDVDMTAQLLKSKQGGAQAVLTYGIGPELAQIANG Sbjct: 181 LGREDLEKVLADKKVTPVAVEKYNIKDVDMTAQLLKSKQGGAQAVLTYGIGPELAQIANG 240 Query: 241 MEKLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGNTPKRKAFIEAYQKAYKV 300 MEKLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGNTPKRKAFIEAYQKAYKV Sbjct: 241 MEKLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGNTPKRKAFIEAYQKAYKV 300 Query: 301 DRMPSAVSAAQGYDSILLLAAAIKQAGTTDGDKVRAALENLNTKVEGVVTTYDKPFTHDD 360 DRMPSAVSAAQGYDSILLLAAAIKQAGTTDGDKVRAALENLNTKVEGVVTTYDKPFTHDD Sbjct: 301 DRMPSAVSAAQGYDSILLLAAAIKQAGTTDGDKVRAALENLNTKVEGVVTTYDKPFTHDD 360 Query: 361 HEAIKPAMVVMGEVKNGRVILGK 383 HEAIKPAMVVMGEVKNGRVILGK Sbjct: 361 HEAIKPAMVVMGEVKNGRVILGK 383 >ref|YP_004752460.1| ABC branched chain amino acid family transporter, periplasmic ligand binding protein [Collimonas fungivorans Ter331] gb|AEK61637.1| ABC branched chain amino acid family transporter, periplasmic ligand binding protein [Collimonas fungivorans Ter331] Length = 385 Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust. Identities = 310/385 (80%), Positives = 344/385 (89%), Gaps = 2/385 (0%) Query: 1 MTYKTQAFVAAALMSLALTSQAADPIKIGVSGPYTGGSAPMGVSMRDGVKLAVAEINAAG 60 M +A VA AL+S L + AA+PIKIGV+GP+TGGSAPMGVSMRDGVKLAVA+INA G Sbjct: 1 MNTIIKACVATALVSWTLAAGAAEPIKIGVTGPFTGGSAPMGVSMRDGVKLAVADINAKG 60 Query: 61 GLLGRQIQLIERDDEAKNERGVQIAQELINKEKVVATVGFINTGVALASQRFYQEAKIPV 120 G+LGRQ+QL+ERDDEAKNERGVQ+AQELINKEKVV TVGFINTGVALASQRFYQEAKIPV Sbjct: 61 GVLGRQLQLVERDDEAKNERGVQVAQELINKEKVVGTVGFINTGVALASQRFYQEAKIPV 120 Query: 121 INNVATGTVITKQF--EKEKDNYVFRTSAADKIQAKMIADEAVDKQKFTKVAILADSTNY 178 +NNVATG+++TKQF + KDNYVFR +A D IQ+ MI DEAV +QK TKVAILADSTNY Sbjct: 121 MNNVATGSIVTKQFVGPENKDNYVFRNAANDTIQSAMIVDEAVVRQKHTKVAILADSTNY 180 Query: 179 GQLGREDLEKVLADKKVTPVAVEKYNIKDVDMTAQLLKSKQGGAQAVLTYGIGPELAQIA 238 GQLGREDLE+ LA + + PVAVEKYN+KDVDMTAQLLK+KQGGA+ VLTYGIGPELAQIA Sbjct: 181 GQLGREDLERTLAARGIKPVAVEKYNLKDVDMTAQLLKAKQGGAEVVLTYGIGPELAQIA 240 Query: 239 NGMEKLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGNTPKRKAFIEAYQKAY 298 NGMEKLNW VPIIGSW LSMGNFIDN+GKNG+GARMPQTFIQD T KRKAFIEAYQKAY Sbjct: 241 NGMEKLNWKVPIIGSWTLSMGNFIDNAGKNGDGARMPQTFIQDATTAKRKAFIEAYQKAY 300 Query: 299 KVDRMPSAVSAAQGYDSILLLAAAIKQAGTTDGDKVRAALENLNTKVEGVVTTYDKPFTH 358 K+DRMPSAVSAAQGYDS+ LLAAAIKQAG+TDG KVR ALENLN VEGVVTTY KP++H Sbjct: 301 KIDRMPSAVSAAQGYDSVYLLAAAIKQAGSTDGVKVREALENLNGTVEGVVTTYTKPYSH 360 Query: 359 DDHEAIKPAMVVMGEVKNGRVILGK 383 DDHEAIKP MVV+GEVKNGRV+L K Sbjct: 361 DDHEAIKPNMVVIGEVKNGRVVLAK 385 >ref|YP_001894558.1| branched-chain amino acid ABC transporter periplasmic protein [Burkholderia phytofirmans PsJN] gb|ACD15334.1| Extracellular ligand-binding receptor [Burkholderia phytofirmans PsJN] Length = 405 Score = 585 bits (1508), Expect = e-165, Method: Compositional matrix adjust. Identities = 288/373 (77%), Positives = 321/373 (86%), Gaps = 2/373 (0%) Query: 10 AAALMSLALTSQAADPIKIGVSGPYTGGSAPMGVSMRDGVKLAVAEINAAGGLLGRQIQL 69 A AL +LA S AADPIKIGV GP+TGGS+ MGVSMRDGV+LA AEIN AGG+LGRQI L Sbjct: 11 ALALCALANVSYAADPIKIGVDGPFTGGSSSMGVSMRDGVRLATAEINKAGGVLGRQIVL 70 Query: 70 IERDDEAKNERGVQIAQELINKEKVVATVGFINTGVALASQRFYQEAKIPVINNVATGTV 129 +ERDDEAKNERGVQIAQELINKEKVVA VG+INTGVALASQRF+QEAKIPV NNVATG++ Sbjct: 71 VERDDEAKNERGVQIAQELINKEKVVAVVGYINTGVALASQRFFQEAKIPVFNNVATGSI 130 Query: 130 ITKQFEKEKDNYVFRTSAADKIQAKMIADEAVDKQKFTKVAILADSTNYGQLGREDLEKV 189 +TKQF + DNYVFR +AAD+IQA MI +EAV K+ F KVAILADSTNYGQLGREDLEK Sbjct: 131 VTKQFTDQPDNYVFRNAAADRIQAPMIVEEAVTKRGFKKVAILADSTNYGQLGREDLEKA 190 Query: 190 LADKKVTPVAVEKYNIKDVDMTAQLLKSKQGGAQAVLTYGIGPELAQIANGMEKLNWHVP 249 LA K V PVAVEK+NIKDVDMTAQLLK+K+ GA+AVLTYGIGPELAQIANGM KL W VP Sbjct: 191 LAAKGVKPVAVEKFNIKDVDMTAQLLKAKEAGAEAVLTYGIGPELAQIANGMAKLGWKVP 250 Query: 250 IIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGNTPKRKAFIEAYQKAYKV--DRMPSAV 307 +IGSW LSM N+IDN+ NG GARMPQTFIQ+ NTPKRK FI+AY K +K +R+ S V Sbjct: 251 LIGSWTLSMANYIDNASTNGEGARMPQTFIQEANTPKRKTFIDAYLKEFKPKNNRIDSPV 310 Query: 308 SAAQGYDSILLLAAAIKQAGTTDGDKVRAALENLNTKVEGVVTTYDKPFTHDDHEAIKPA 367 SAAQGYDS+ LLAAAI QAG+TDG KVRAALENLNTKVEGVV YDKPFTHDDHEAI P Sbjct: 311 SAAQGYDSVYLLAAAITQAGSTDGPKVRAALENLNTKVEGVVMVYDKPFTHDDHEAISPN 370 Query: 368 MVVMGEVKNGRVI 380 + V+GEVK GRV+ Sbjct: 371 VPVVGEVKGGRVV 383 >ref|YP_557335.1| branched chain amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] ref|ZP_06844789.1| Extracellular ligand-binding receptor [Burkholderia sp. Ch1-1] gb|ABE29283.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Burkholderia xenovorans LB400] gb|EFG67553.1| Extracellular ligand-binding receptor [Burkholderia sp. Ch1-1] Length = 405 Score = 584 bits (1505), Expect = e-165, Method: Compositional matrix adjust. Identities = 289/373 (77%), Positives = 321/373 (86%), Gaps = 2/373 (0%) Query: 10 AAALMSLALTSQAADPIKIGVSGPYTGGSAPMGVSMRDGVKLAVAEINAAGGLLGRQIQL 69 A AL +LA AADPIKIGV GP+TGGS+ MGVSMRDGV+LA AEIN AGG+LGRQI L Sbjct: 11 ALALCALANVGYAADPIKIGVDGPFTGGSSSMGVSMRDGVRLATAEINKAGGVLGRQIVL 70 Query: 70 IERDDEAKNERGVQIAQELINKEKVVATVGFINTGVALASQRFYQEAKIPVINNVATGTV 129 +ERDDEAKNERGVQIAQELINKEKVVA VG+INTGVALASQRF+QEAKIPV NNVATG+V Sbjct: 71 VERDDEAKNERGVQIAQELINKEKVVAVVGYINTGVALASQRFFQEAKIPVFNNVATGSV 130 Query: 130 ITKQFEKEKDNYVFRTSAADKIQAKMIADEAVDKQKFTKVAILADSTNYGQLGREDLEKV 189 +TKQF + DNYVFR +AAD+IQA MI +EAV ++ F KVAILADSTNYGQLGREDLEK Sbjct: 131 VTKQFTDQPDNYVFRNAAADRIQAPMIVEEAVTRRGFRKVAILADSTNYGQLGREDLEKA 190 Query: 190 LADKKVTPVAVEKYNIKDVDMTAQLLKSKQGGAQAVLTYGIGPELAQIANGMEKLNWHVP 249 LA K V PVAVEK+NIKDVDMTAQLLK+K+ GA+AVLTYGIGPELAQIANGM KL W VP Sbjct: 191 LAAKGVKPVAVEKFNIKDVDMTAQLLKAKEAGAEAVLTYGIGPELAQIANGMAKLGWKVP 250 Query: 250 IIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGNTPKRKAFIEAYQKAYKV--DRMPSAV 307 +IGSW LSM N+IDN+ NG GARMPQTFIQ+ NTPKRKAFI+AY K +K +R+ S V Sbjct: 251 LIGSWTLSMANYIDNASTNGEGARMPQTFIQEANTPKRKAFIDAYLKEFKPKNNRIDSPV 310 Query: 308 SAAQGYDSILLLAAAIKQAGTTDGDKVRAALENLNTKVEGVVTTYDKPFTHDDHEAIKPA 367 SAAQGYDSI LLAAAI QAG+TDG KVRAALENLNTKVEGVV YDKPFTHDDHEAI P Sbjct: 311 SAAQGYDSIYLLAAAITQAGSTDGPKVRAALENLNTKVEGVVMVYDKPFTHDDHEAISPN 370 Query: 368 MVVMGEVKNGRVI 380 + V+GEVK GRV+ Sbjct: 371 VPVVGEVKGGRVV 383 >ref|ZP_03267004.1| Extracellular ligand-binding receptor [Burkholderia sp. H160] gb|EEA01411.1| Extracellular ligand-binding receptor [Burkholderia sp. H160] Length = 404 Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust. Identities = 285/383 (74%), Positives = 322/383 (84%), Gaps = 3/383 (0%) Query: 1 MTYKTQAFVAA-ALMSLALTSQAADPIKIGVSGPYTGGSAPMGVSMRDGVKLAVAEINAA 59 M + ++ V+A AL +L S AADPIKIGV GP+TGGS+ MGVSMRDGV+LA EIN A Sbjct: 1 MGIRLKSIVSALALCALIDVSYAADPIKIGVDGPFTGGSSSMGVSMRDGVRLATEEINKA 60 Query: 60 GGLLGRQIQLIERDDEAKNERGVQIAQELINKEKVVATVGFINTGVALASQRFYQEAKIP 119 GG+LGRQI L+ERDDEAKNERGVQIAQELINKEKV A VG++NTGVALASQRF+QEAKIP Sbjct: 61 GGVLGRQIVLVERDDEAKNERGVQIAQELINKEKVAAVVGYVNTGVALASQRFFQEAKIP 120 Query: 120 VINNVATGTVITKQFEKEKDNYVFRTSAADKIQAKMIADEAVDKQKFTKVAILADSTNYG 179 V NNVATG+V+TKQF + DNYVFR +AAD+IQA MI DEA+ K+ F KVAILADSTNYG Sbjct: 121 VFNNVATGSVLTKQFTDQPDNYVFRNAAADRIQAPMIVDEAIGKRGFKKVAILADSTNYG 180 Query: 180 QLGREDLEKVLADKKVTPVAVEKYNIKDVDMTAQLLKSKQGGAQAVLTYGIGPELAQIAN 239 QLGREDLEK LA K V PVA EK+NIKDVDMTAQLLK+K+ GA+AVLTYGIGPELAQIAN Sbjct: 181 QLGREDLEKALAAKGVKPVAEEKFNIKDVDMTAQLLKAKEAGAEAVLTYGIGPELAQIAN 240 Query: 240 GMEKLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGNTPKRKAFIEAYQKAYK 299 GM KL W VP+IGSW LSM N+IDN+ NG GARMPQTFIQ+ NTPKRKAFI+AY K +K Sbjct: 241 GMAKLGWKVPLIGSWTLSMANYIDNASTNGEGARMPQTFIQEANTPKRKAFIDAYLKEFK 300 Query: 300 V--DRMPSAVSAAQGYDSILLLAAAIKQAGTTDGDKVRAALENLNTKVEGVVTTYDKPFT 357 +R+ SAVSAAQGYDS+ LLAAA+ QAG+ DG KVRAALENLN KVEGVV YDKPFT Sbjct: 301 PKNNRIESAVSAAQGYDSVYLLAAAMTQAGSVDGSKVRAALENLNGKVEGVVMAYDKPFT 360 Query: 358 HDDHEAIKPAMVVMGEVKNGRVI 380 HDDHEAI P + V+GEVK G VI Sbjct: 361 HDDHEAISPNVPVVGEVKGGHVI 383 >ref|YP_003609338.1| extracellular ligand-binding receptor [Burkholderia sp. CCGE1002] gb|ADG19827.1| Extracellular ligand-binding receptor [Burkholderia sp. CCGE1002] Length = 404 Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust. Identities = 285/383 (74%), Positives = 324/383 (84%), Gaps = 3/383 (0%) Query: 1 MTYKTQAFVAA-ALMSLALTSQAADPIKIGVSGPYTGGSAPMGVSMRDGVKLAVAEINAA 59 M + ++ V+A AL +L S AADPIKIGV GP+TGGS+ MGVSMRDGV+LA AEIN A Sbjct: 1 MGIRLKSVVSALALCALIDVSYAADPIKIGVDGPFTGGSSSMGVSMRDGVRLATAEINKA 60 Query: 60 GGLLGRQIQLIERDDEAKNERGVQIAQELINKEKVVATVGFINTGVALASQRFYQEAKIP 119 GG+LGRQI L+ERDDEAKNERGVQIAQELINKEKV A VG+INTGVALASQRF+QEAKIP Sbjct: 61 GGVLGRQIVLVERDDEAKNERGVQIAQELINKEKVAAVVGYINTGVALASQRFFQEAKIP 120 Query: 120 VINNVATGTVITKQFEKEKDNYVFRTSAADKIQAKMIADEAVDKQKFTKVAILADSTNYG 179 V NNVATG+V+TKQF + DNYVFR +AAD+IQA MI +EA+ K+ F KVAILADSTNYG Sbjct: 121 VFNNVATGSVLTKQFTDQPDNYVFRNAAADRIQAPMIVEEAIVKRGFKKVAILADSTNYG 180 Query: 180 QLGREDLEKVLADKKVTPVAVEKYNIKDVDMTAQLLKSKQGGAQAVLTYGIGPELAQIAN 239 QLGREDLEK L K V PVAVEK+NIKDVDMTAQLLK+K+ GA+AVLTYGIGPELAQIAN Sbjct: 181 QLGREDLEKALGTKGVKPVAVEKFNIKDVDMTAQLLKAKEAGAEAVLTYGIGPELAQIAN 240 Query: 240 GMEKLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGNTPKRKAFIEAYQKAYK 299 GM KL W VP++GSW LSM N+IDN+ NG GARMPQTFIQ+ NTPKRKAFI+AY K +K Sbjct: 241 GMAKLGWKVPLVGSWTLSMANYIDNASTNGEGARMPQTFIQEANTPKRKAFIDAYLKEFK 300 Query: 300 V--DRMPSAVSAAQGYDSILLLAAAIKQAGTTDGDKVRAALENLNTKVEGVVTTYDKPFT 357 +R+ SAVSAAQGYDS+ LLAAA+ QAG+ +G KVRAALENLN KVEGVV YDKPFT Sbjct: 301 PKNNRIESAVSAAQGYDSVYLLAAAMTQAGSIEGPKVRAALENLNGKVEGVVMVYDKPFT 360 Query: 358 HDDHEAIKPAMVVMGEVKNGRVI 380 HDDHEAI P + V+GEVK GRVI Sbjct: 361 HDDHEAISPNVPVVGEVKGGRVI 383 >ref|YP_523095.1| extracellular ligand-binding receptor [Rhodoferax ferrireducens T118] gb|ABD69564.1| Extracellular ligand-binding receptor [Rhodoferax ferrireducens T118] Length = 399 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 277/378 (73%), Positives = 321/378 (84%), Gaps = 1/378 (0%) Query: 3 YKTQAFVAAALMSLALTSQAADPIKIGVSGPYTGGSAPMGVSMRDGVKLAVAEINAAGGL 62 ++T A + AL ++A S AAD IKIG+ GP TGGS+PMGVSMRDG KLAV EINA GGL Sbjct: 4 FRTIALSSVAL-AVASMSMAADNIKIGLQGPLTGGSSPMGVSMRDGAKLAVTEINAHGGL 62 Query: 63 LGRQIQLIERDDEAKNERGVQIAQELINKEKVVATVGFINTGVALASQRFYQEAKIPVIN 122 LGR+I++IERDDEAKNERGVQIAQELINKEKVVATVG+IN+GVALASQRFYQEAKIPV+N Sbjct: 63 LGRKIEMIERDDEAKNERGVQIAQELINKEKVVATVGYINSGVALASQRFYQEAKIPVMN 122 Query: 123 NVATGTVITKQFEKEKDNYVFRTSAADKIQAKMIADEAVDKQKFTKVAILADSTNYGQLG 182 NVAT T IT+QF + NYVFR SA D IQ+ +I +E + ++K+TKVAILADSTNYGQLG Sbjct: 123 NVATATTITQQFADQPQNYVFRNSANDTIQSTLIVEEVIGRRKYTKVAILADSTNYGQLG 182 Query: 183 REDLEKVLADKKVTPVAVEKYNIKDVDMTAQLLKSKQGGAQAVLTYGIGPELAQIANGME 242 R DLEK LA K +TPVA EKYNIKDVDMT QLLK+K+ GAQ V+TYGIGPELAQIANGM Sbjct: 183 RADLEKALAAKGITPVATEKYNIKDVDMTPQLLKAKEAGAQVVITYGIGPELAQIANGMI 242 Query: 243 KLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGNTPKRKAFIEAYQKAYKVDR 302 KL W VP++GSW LSMGNFIDN+GKN + A MPQTFIQ+GNTPKRK+FI+AYQK YKV R Sbjct: 243 KLGWKVPMMGSWTLSMGNFIDNAGKNADDALMPQTFIQEGNTPKRKSFIDAYQKTYKVTR 302 Query: 303 MPSAVSAAQGYDSILLLAAAIKQAGTTDGDKVRAALENLNTKVEGVVTTYDKPFTHDDHE 362 +PS VSAAQGYDSI LLAAAIKQAG+T+G KV AALE+L T VEGVVTTY+KPF+ DHE Sbjct: 303 IPSPVSAAQGYDSIYLLAAAIKQAGSTEGPKVLAALEDLKTPVEGVVTTYNKPFSKADHE 362 Query: 363 AIKPAMVVMGEVKNGRVI 380 AI M V+G+V++G V+ Sbjct: 363 AITLNMPVIGKVQDGHVV 380 >gb|EGP46929.1| receptor family ligand binding region family protein 29 [Achromobacter xylosoxidans AXX-A] Length = 387 Score = 548 bits (1411), Expect = e-154, Method: Compositional matrix adjust. Identities = 273/384 (71%), Positives = 314/384 (81%), Gaps = 4/384 (1%) Query: 1 MTYKTQAFVAAALMSLALTSQAADPIKIGVSGPYTGGSAPMGVSMRDGVKLAVAEINAAG 60 M ++ + +++ AADPIKIGV+GPYTGGS+ MGVSMRDGV+LA+ EIN G Sbjct: 1 MDFRLKLLAGTLAFAVSAAGYAADPIKIGVAGPYTGGSSSMGVSMRDGVRLAIEEINKGG 60 Query: 61 GLLGRQIQLIERDDEAKNERGVQIAQELINKEKVVATVGFINTGVALASQRFYQEAKIPV 120 G+LGRQ+ +ERDDEAKNERGVQIAQELINKE+V ATVG+INTGVALASQRFYQ+AKIPV Sbjct: 61 GVLGRQLVAVERDDEAKNERGVQIAQELINKEQVTATVGYINTGVALASQRFYQDAKIPV 120 Query: 121 INNVATGTVITKQFEKEK--DNYVFRTSAADKIQAKMIADEAVDKQKFTKVAILADSTNY 178 NNVATG+VIT QF+ + DNYVFR +A D IQA MI +EAV ++ F KVAILADSTNY Sbjct: 121 FNNVATGSVITHQFKAPEYPDNYVFRNAAHDSIQAPMIVEEAVTRRGFKKVAILADSTNY 180 Query: 179 GQLGREDLEKVLADKKVTPVAVEKYNIKDVDMTAQLLKSKQGGAQAVLTYGIGPELAQIA 238 GQLGREDLEK L K + PVAVEK+NIKDVDMTAQLLK+K GA+AVLTYGIGPELAQIA Sbjct: 181 GQLGREDLEKALDAKGIKPVAVEKFNIKDVDMTAQLLKAKAAGAEAVLTYGIGPELAQIA 240 Query: 239 NGMEKLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGNTPKRKAFIEAYQKAY 298 NGM KL W VPIIGSW LSM N+IDNSG NG GARMPQTFIQD +TPKRKAFI+AY + Sbjct: 241 NGMAKLGWKVPIIGSWTLSMANYIDNSGANGEGARMPQTFIQDPDTPKRKAFIDAYLAKF 300 Query: 299 KV--DRMPSAVSAAQGYDSILLLAAAIKQAGTTDGDKVRAALENLNTKVEGVVTTYDKPF 356 K +R+ S VSAAQGYDSI LLAAAIKQA +T+G K+R ALENL T VEGVV TY+KPF Sbjct: 301 KPKNNRIDSPVSAAQGYDSIFLLAAAIKQANSTEGPKIREALENLQTPVEGVVMTYNKPF 360 Query: 357 THDDHEAIKPAMVVMGEVKNGRVI 380 THD+H+AI VV+GEVK GRV+ Sbjct: 361 THDNHDAIGVKEVVIGEVKGGRVV 384 >gb|EFV81972.1| extracellular ligand-binding receptor [Achromobacter xylosoxidans C54] Length = 387 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 272/384 (70%), Positives = 314/384 (81%), Gaps = 4/384 (1%) Query: 1 MTYKTQAFVAAALMSLALTSQAADPIKIGVSGPYTGGSAPMGVSMRDGVKLAVAEINAAG 60 M ++ + +++ AADPIKIGV+GPYTGGS+ MGVSMRDGV+LA+ EIN G Sbjct: 1 MDFRLKLLAGTLAFAVSAAGYAADPIKIGVAGPYTGGSSSMGVSMRDGVRLAIEEINKNG 60 Query: 61 GLLGRQIQLIERDDEAKNERGVQIAQELINKEKVVATVGFINTGVALASQRFYQEAKIPV 120 G+LGRQ+ +ERDDEAKNERGVQIAQELINKE+V ATVG+INTGVALASQRFYQ+AKIPV Sbjct: 61 GVLGRQLVAVERDDEAKNERGVQIAQELINKEQVTATVGYINTGVALASQRFYQDAKIPV 120 Query: 121 INNVATGTVITKQFEKEK--DNYVFRTSAADKIQAKMIADEAVDKQKFTKVAILADSTNY 178 NNVATG+VIT QF+ + DNYVFR +A D IQA MI +EA+ ++ F KVAILADSTNY Sbjct: 121 FNNVATGSVITHQFKAPEYPDNYVFRNAAHDSIQAPMIVEEAITRRGFKKVAILADSTNY 180 Query: 179 GQLGREDLEKVLADKKVTPVAVEKYNIKDVDMTAQLLKSKQGGAQAVLTYGIGPELAQIA 238 GQLGREDLEK L K + PVAVEK+NIKDVDMTAQLLK+K GA+AVLTYGIGPELAQIA Sbjct: 181 GQLGREDLEKALDAKGIKPVAVEKFNIKDVDMTAQLLKAKAAGAEAVLTYGIGPELAQIA 240 Query: 239 NGMEKLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQDGNTPKRKAFIEAYQKAY 298 NGM KL W VPIIGSW LSM N+IDNSG NG GARMPQTFIQD +TPKRKAFI+AY + Sbjct: 241 NGMAKLGWKVPIIGSWTLSMANYIDNSGANGEGARMPQTFIQDPDTPKRKAFIDAYLAKF 300 Query: 299 KV--DRMPSAVSAAQGYDSILLLAAAIKQAGTTDGDKVRAALENLNTKVEGVVTTYDKPF 356 K +R+ S VSAAQGYDSI LLAAAIKQA +T+G K+R ALENL T VEGVV TY+KPF Sbjct: 301 KPKNNRIDSPVSAAQGYDSIFLLAAAIKQANSTEGPKIREALENLQTPVEGVVMTYNKPF 360 Query: 357 THDDHEAIKPAMVVMGEVKNGRVI 380 THD+H+AI VV+GEVK GRV+ Sbjct: 361 THDNHDAIGAKEVVIGEVKGGRVV 384 >ref|ZP_08273439.1| Extracellular ligand-binding receptor [Oxalobacteraceae bacterium IMCC9480] gb|EGF33102.1| Extracellular ligand-binding receptor [Oxalobacteraceae bacterium IMCC9480] Length = 345 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 269/345 (77%), Positives = 299/345 (86%), Gaps = 2/345 (0%) Query: 41 MGVSMRDGVKLAVAEINAAGGLLGRQIQLIERDDEAKNERGVQIAQELINKEKVVATVGF 100 MGVSMRDGVKLAV+EINA GG+LGRQIQLIERDDEAKNERGVQ+AQELINKEKVVATVGF Sbjct: 1 MGVSMRDGVKLAVSEINAKGGVLGRQIQLIERDDEAKNERGVQVAQELINKEKVVATVGF 60 Query: 101 INTGVALASQRFYQEAKIPVINNVATGTVITKQFEKEKDNYVFRTSAADKIQAKMIADEA 160 INTGVALASQRFYQEAKIPV+NNVATG+++TKQF + +NY+FR +A D IQ+ MI +EA Sbjct: 61 INTGVALASQRFYQEAKIPVLNNVATGSIVTKQFADQPENYIFRNAANDSIQSAMIVEEA 120 Query: 161 VDKQKFTKVAILADSTNYGQLGREDLEKVLADKKVTPVAVEKYNIKDVDMTAQLLKSKQG 220 V K+KFTK+AILADSTNYGQLGREDLEK L K + VA+EKYNIKDVDMTAQLLKSKQ Sbjct: 121 VTKRKFTKLAILADSTNYGQLGREDLEKALDKKGIKAVAIEKYNIKDVDMTAQLLKSKQA 180 Query: 221 GAQAVLTYGIGPELAQIANGMEKLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMPQTFIQ 280 GAQAVLTYGIGPELAQIANGMEKL W VP+IGSW LSM NFIDN+GKNG+G MPQTFIQ Sbjct: 181 GAQAVLTYGIGPELAQIANGMEKLGWKVPLIGSWTLSMANFIDNAGKNGDGTLMPQTFIQ 240 Query: 281 DGNTPKRKAFIEAYQKAYKVD--RMPSAVSAAQGYDSILLLAAAIKQAGTTDGDKVRAAL 338 + TPKRK FI+ Y K Y R+PS VSAAQGYDSI LLAAAIKQAGTTDG KVR AL Sbjct: 241 EPTTPKRKTFIDGYVKTYSPQGGRIPSPVSAAQGYDSIFLLAAAIKQAGTTDGPKVREAL 300 Query: 339 ENLNTKVEGVVTTYDKPFTHDDHEAIKPAMVVMGEVKNGRVILGK 383 E+L KV+GVVT+Y+KPF+ DDHEAIK + V GEVK+GRVIL K Sbjct: 301 ESLKEKVDGVVTSYNKPFSKDDHEAIKIDVPVFGEVKDGRVILAK 345