BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0336.p (496 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775199.1| transmembrane NADH dehydrogenase I subunit M... 981 0.0 ref|YP_004752258.1| NADH-ubiquinone oxidoreductase subunit M [Co... 776 0.0 ref|YP_001353164.1| NADH dehydrogenase I chain M [Janthinobacter... 775 0.0 ref|YP_001100094.1| NADH dehydrogenase I subunit M [Herminiimona... 767 0.0 ref|ZP_08274720.1| NADH-ubiquinone oxidoreductase chain M [Oxalo... 755 0.0 ref|ZP_06686346.1| NADH-quinone oxidoreductase subunit M [Achrom... 736 0.0 gb|EGP45256.1| NADH:ubiquinone oxidoreductase subunit M [Achromo... 733 0.0 ref|YP_001630297.1| NADH dehydrogenase subunit M [Bordetella pet... 733 0.0 ref|YP_003977523.1| NADH-quinone oxidoreductase subunit M [Achro... 733 0.0 gb|EFV82600.1| NADH-ubiquinone oxidoreductase [Achromobacter xyl... 730 0.0 >ref|YP_003775199.1| transmembrane NADH dehydrogenase I subunit M [Herbaspirillum seropedicae SmR1] gb|ADJ63291.1| transmembrane NADH dehydrogenase I (chain M) oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 496 Score = 981 bits (2537), Expect = 0.0, Method: Compositional matrix adjust. Identities = 496/496 (100%), Positives = 496/496 (100%) Query: 1 MMQSTFPILSLAIWVPIVFGILVLALGRDSNPGLARWLALFGSLVGLVVTFPLIQHFDPL 60 MMQSTFPILSLAIWVPIVFGILVLALGRDSNPGLARWLALFGSLVGLVVTFPLIQHFDPL Sbjct: 1 MMQSTFPILSLAIWVPIVFGILVLALGRDSNPGLARWLALFGSLVGLVVTFPLIQHFDPL 60 Query: 61 AHGYQFVEKTPWIDRFNISYFLGLDGISLWFVPLTAFITVIVVLAGWVVIQKRVAQYMGA 120 AHGYQFVEKTPWIDRFNISYFLGLDGISLWFVPLTAFITVIVVLAGWVVIQKRVAQYMGA Sbjct: 61 AHGYQFVEKTPWIDRFNISYFLGLDGISLWFVPLTAFITVIVVLAGWVVIQKRVAQYMGA 120 Query: 121 FLILSGIMVGVFSALDAMLFYAFFEATLIPMFIIVGVWGGDNRVYAAFKLFLYTLLGSLL 180 FLILSGIMVGVFSALDAMLFYAFFEATLIPMFIIVGVWGGDNRVYAAFKLFLYTLLGSLL Sbjct: 121 FLILSGIMVGVFSALDAMLFYAFFEATLIPMFIIVGVWGGDNRVYAAFKLFLYTLLGSLL 180 Query: 181 MLIALIYLYYVSGGSFEIPTWHQVPLSMLEQKILFFAFLAAFAVKVPMWPVHTWLPDAHV 240 MLIALIYLYYVSGGSFEIPTWHQVPLSMLEQKILFFAFLAAFAVKVPMWPVHTWLPDAHV Sbjct: 181 MLIALIYLYYVSGGSFEIPTWHQVPLSMLEQKILFFAFLAAFAVKVPMWPVHTWLPDAHV 240 Query: 241 QAPTGGSIVLAAIMLKLGAYGFLRFSLPILPDASHALSGFMIFLSLVAVIYIGLVALVQQ 300 QAPTGGSIVLAAIMLKLGAYGFLRFSLPILPDASHALSGFMIFLSLVAVIYIGLVALVQQ Sbjct: 241 QAPTGGSIVLAAIMLKLGAYGFLRFSLPILPDASHALSGFMIFLSLVAVIYIGLVALVQQ 300 Query: 301 DMKKLVAYSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMFMCIGVLYDQMHTR 360 DMKKLVAYSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMFMCIGVLYDQMHTR Sbjct: 301 DMKKLVAYSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMFMCIGVLYDQMHTR 360 Query: 361 EISQYGGVVNKMPRFAFFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLAATAL 420 EISQYGGVVNKMPRFAFFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLAATAL Sbjct: 361 EISQYGGVVNKMPRFAFFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLAATAL 420 Query: 421 ILGAAYSLWLAKRVIFGAVTNHHVAELVDLNGREFLILGLLAIATLVMGVYPGIITDSIQ 480 ILGAAYSLWLAKRVIFGAVTNHHVAELVDLNGREFLILGLLAIATLVMGVYPGIITDSIQ Sbjct: 421 ILGAAYSLWLAKRVIFGAVTNHHVAELVDLNGREFLILGLLAIATLVMGVYPGIITDSIQ 480 Query: 481 TSVTDLLKHVAVSKIN 496 TSVTDLLKHVAVSKIN Sbjct: 481 TSVTDLLKHVAVSKIN 496 >ref|YP_004752258.1| NADH-ubiquinone oxidoreductase subunit M [Collimonas fungivorans Ter331] gb|AEK61435.1| NADH-ubiquinone oxidoreductase chain M [Collimonas fungivorans Ter331] Length = 494 Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/493 (78%), Positives = 438/493 (88%) Query: 4 STFPILSLAIWVPIVFGILVLALGRDSNPGLARWLALFGSLVGLVVTFPLIQHFDPLAHG 63 STFP+LSLAIW P+ FGILVLA+GRD NP L RWL+L G+ V VVT PL+ FD HG Sbjct: 2 STFPLLSLAIWCPVAFGILVLAVGRDDNPTLVRWLSLLGAAVSFVVTLPLVCGFDNAFHG 61 Query: 64 YQFVEKTPWIDRFNISYFLGLDGISLWFVPLTAFITVIVVLAGWVVIQKRVAQYMGAFLI 123 QFVEKT WIDRFN++Y+LG+DGISLWFVPLTAFITV+VV++ W VI+K+VAQYMGAFLI Sbjct: 62 MQFVEKTTWIDRFNVNYYLGIDGISLWFVPLTAFITVLVVISAWQVIEKKVAQYMGAFLI 121 Query: 124 LSGIMVGVFSALDAMLFYAFFEATLIPMFIIVGVWGGDNRVYAAFKLFLYTLLGSLLMLI 183 LSG+M+GVF ALD MLFY FFEATL+PMFIIVGVWGG NRVYAA K FLYTL+GSLLMLI Sbjct: 122 LSGLMIGVFCALDGMLFYVFFEATLVPMFIIVGVWGGANRVYAAIKFFLYTLMGSLLMLI 181 Query: 184 ALIYLYYVSGGSFEIPTWHQVPLSMLEQKILFFAFLAAFAVKVPMWPVHTWLPDAHVQAP 243 AL+YLY SGGSFEI TWHQ+PL+M Q ++F AFL AFAVKVPMWPVHTWLPDAHV+AP Sbjct: 182 ALLYLYIQSGGSFEILTWHQLPLTMTAQILIFLAFLMAFAVKVPMWPVHTWLPDAHVEAP 241 Query: 244 TGGSIVLAAIMLKLGAYGFLRFSLPILPDASHALSGFMIFLSLVAVIYIGLVALVQQDMK 303 TGGS+VLAAIMLKLG YGFLRFSLPI PDASH L+GF+I LSL+AVIYIGLVALVQ DMK Sbjct: 242 TGGSVVLAAIMLKLGGYGFLRFSLPITPDASHYLAGFIITLSLIAVIYIGLVALVQNDMK 301 Query: 304 KLVAYSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMFMCIGVLYDQMHTREIS 363 KL+AYSSIAHMGFVTLGFF+FND+ +QGGIVQMISHGFVSGAMF+CIGVLYD+MHTR+I+ Sbjct: 302 KLIAYSSIAHMGFVTLGFFIFNDIGLQGGIVQMISHGFVSGAMFLCIGVLYDRMHTRQIA 361 Query: 364 QYGGVVNKMPRFAFFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLAATALILG 423 +YGGVVN MPRFA F+LFSLAN GLP TSGFVGEFMVILGAVKFNFWIGLLAATALILG Sbjct: 362 EYGGVVNVMPRFAALFVLFSLANSGLPGTSGFVGEFMVILGAVKFNFWIGLLAATALILG 421 Query: 424 AAYSLWLAKRVIFGAVTNHHVAELVDLNGREFLILGLLAIATLVMGVYPGIITDSIQTSV 483 AAYSLWL KRV+FGA+TN HV E++DLN REF++LG+LAIA + MGVYP TD++Q SV Sbjct: 422 AAYSLWLVKRVVFGAITNSHVKEMLDLNKREFVMLGVLAIAVIAMGVYPAPFTDAMQVSV 481 Query: 484 TDLLKHVAVSKIN 496 DLLKHVAV+K+N Sbjct: 482 ADLLKHVAVTKLN 494 >ref|YP_001353164.1| NADH dehydrogenase I chain M [Janthinobacterium sp. Marseille] gb|ABR88792.1| NADH dehydrogenase I chain M [Janthinobacterium sp. Marseille] Length = 496 Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/496 (78%), Positives = 438/496 (88%) Query: 1 MMQSTFPILSLAIWVPIVFGILVLALGRDSNPGLARWLALFGSLVGLVVTFPLIQHFDPL 60 MMQSTFP+LSLAIW+PI FG+ +LA+GRD+NP R L+LFGS+V +VT P++ FD Sbjct: 1 MMQSTFPLLSLAIWLPIAFGVFILAVGRDTNPNAVRVLSLFGSIVSFLVTLPIVAKFDNA 60 Query: 61 AHGYQFVEKTPWIDRFNISYFLGLDGISLWFVPLTAFITVIVVLAGWVVIQKRVAQYMGA 120 AHG QFVEK WID FNI+Y LG+DG+S+WFV LTAFIT+ VV+A W VI+KRVAQYMGA Sbjct: 61 AHGMQFVEKMKWIDIFNINYSLGVDGLSMWFVILTAFITIFVVIAAWEVIEKRVAQYMGA 120 Query: 121 FLILSGIMVGVFSALDAMLFYAFFEATLIPMFIIVGVWGGDNRVYAAFKLFLYTLLGSLL 180 FLILSG+M+GVF ALD +LFY FFE+TLIPMFII+GVWGG NRVYA+ K FLYT GSLL Sbjct: 121 FLILSGLMIGVFCALDGLLFYVFFESTLIPMFIIIGVWGGANRVYASIKFFLYTFFGSLL 180 Query: 181 MLIALIYLYYVSGGSFEIPTWHQVPLSMLEQKILFFAFLAAFAVKVPMWPVHTWLPDAHV 240 ML+AL+YLY+ SG SF+I WH +PL M Q ++F AFL AFAVKVPMWPVHTWLPDAHV Sbjct: 181 MLVALLYLYFKSGHSFDILAWHTLPLPMDAQILIFLAFLMAFAVKVPMWPVHTWLPDAHV 240 Query: 241 QAPTGGSIVLAAIMLKLGAYGFLRFSLPILPDASHALSGFMIFLSLVAVIYIGLVALVQQ 300 +APTGGS+VLAAIMLKLGAYGFLRFSLPI PDASH LSGFMI LSL+AVIYIGLVALVQ Sbjct: 241 EAPTGGSVVLAAIMLKLGAYGFLRFSLPITPDASHYLSGFMITLSLIAVIYIGLVALVQT 300 Query: 301 DMKKLVAYSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMFMCIGVLYDQMHTR 360 DMKKLVAYSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMF+CIGVLYD+MHTR Sbjct: 301 DMKKLVAYSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMFLCIGVLYDRMHTR 360 Query: 361 EISQYGGVVNKMPRFAFFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLAATAL 420 I+ YGGVVN MP+FA FF+LFS+ N GLPATSGFVGEFMVILGAVKFNFWIGLLAATAL Sbjct: 361 NIADYGGVVNVMPKFAAFFVLFSMGNAGLPATSGFVGEFMVILGAVKFNFWIGLLAATAL 420 Query: 421 ILGAAYSLWLAKRVIFGAVTNHHVAELVDLNGREFLILGLLAIATLVMGVYPGIITDSIQ 480 ILGAAYSLWLAKRVIFGA+TNHHV+E+ DLN REFL+LGLLAIA L MG+YP TD++Q Sbjct: 421 ILGAAYSLWLAKRVIFGAITNHHVSEMKDLNKREFLMLGLLAIAVLAMGLYPAPFTDAMQ 480 Query: 481 TSVTDLLKHVAVSKIN 496 TSVTDLLKHVA+SK+N Sbjct: 481 TSVTDLLKHVAISKLN 496 >ref|YP_001100094.1| NADH dehydrogenase I subunit M [Herminiimonas arsenicoxydans] emb|CAL61969.1| NADH-quinone oxidoreductase subunit M [Herminiimonas arsenicoxydans] Length = 496 Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/495 (78%), Positives = 436/495 (88%) Query: 1 MMQSTFPILSLAIWVPIVFGILVLALGRDSNPGLARWLALFGSLVGLVVTFPLIQHFDPL 60 MMQSTFP+LSLAIW+PI FGI+V+ALGRD NP +AR ++L G++V +VT PLIQ FD Sbjct: 1 MMQSTFPLLSLAIWLPIAFGIVVIALGRDDNPNVARSVSLVGAIVSFLVTLPLIQKFDNA 60 Query: 61 AHGYQFVEKTPWIDRFNISYFLGLDGISLWFVPLTAFITVIVVLAGWVVIQKRVAQYMGA 120 AHG QFVEK WID FNI+Y LG+DG+S+WFV LTAFIT+ VV+AGW VI+KRV QYMGA Sbjct: 61 AHGMQFVEKFKWIDIFNINYSLGVDGLSMWFVVLTAFITIFVVIAGWEVIEKRVGQYMGA 120 Query: 121 FLILSGIMVGVFSALDAMLFYAFFEATLIPMFIIVGVWGGDNRVYAAFKLFLYTLLGSLL 180 FLILSG+M+GVF ALD +LFY FFE+TLIPMFII+GVWGG NRVYA+ K FLYT GSLL Sbjct: 121 FLILSGLMIGVFCALDGLLFYVFFESTLIPMFIIIGVWGGANRVYASIKFFLYTFFGSLL 180 Query: 181 MLIALIYLYYVSGGSFEIPTWHQVPLSMLEQKILFFAFLAAFAVKVPMWPVHTWLPDAHV 240 ML+AL+YLY+ SG SF+I WH +PL M Q ++F AFL AFAVKVPMWPVHTWLPDAHV Sbjct: 181 MLVALLYLYFKSGHSFDILAWHTLPLPMDAQILIFLAFLMAFAVKVPMWPVHTWLPDAHV 240 Query: 241 QAPTGGSIVLAAIMLKLGAYGFLRFSLPILPDASHALSGFMIFLSLVAVIYIGLVALVQQ 300 +APTGGS+VLAAIMLKLGAYGFLRFSLPI PDASH LSGFMI LSL+AVIYIGLVALVQ+ Sbjct: 241 EAPTGGSVVLAAIMLKLGAYGFLRFSLPITPDASHYLSGFMITLSLIAVIYIGLVALVQK 300 Query: 301 DMKKLVAYSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMFMCIGVLYDQMHTR 360 DMKKLVAYSSIAHMGFVTLGFFMFNDMAVQGGI QMISHGFVSGAMF+CIGVLYD+MHTR Sbjct: 301 DMKKLVAYSSIAHMGFVTLGFFMFNDMAVQGGIAQMISHGFVSGAMFLCIGVLYDRMHTR 360 Query: 361 EISQYGGVVNKMPRFAFFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLAATAL 420 I+ YGGVVN MP+FA FF+LFS+ N GLPATSGFVGEFMVILGAV++NFWIGLLAATAL Sbjct: 361 NIADYGGVVNTMPKFAAFFVLFSMGNAGLPATSGFVGEFMVILGAVQYNFWIGLLAATAL 420 Query: 421 ILGAAYSLWLAKRVIFGAVTNHHVAELVDLNGREFLILGLLAIATLVMGVYPGIITDSIQ 480 ILGAAYSLWLAKRV+FGAV NHHVAEL D+N REFL+LGLLAIA L MG+YP TD +Q Sbjct: 421 ILGAAYSLWLAKRVLFGAVANHHVAELKDINKREFLMLGLLAIAVLAMGLYPAPFTDVMQ 480 Query: 481 TSVTDLLKHVAVSKI 495 TSV DLLKHVA+SK+ Sbjct: 481 TSVADLLKHVAISKL 495 >ref|ZP_08274720.1| NADH-ubiquinone oxidoreductase chain M [Oxalobacteraceae bacterium IMCC9480] gb|EGF31794.1| NADH-ubiquinone oxidoreductase chain M [Oxalobacteraceae bacterium IMCC9480] Length = 500 Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/500 (77%), Positives = 428/500 (85%), Gaps = 4/500 (0%) Query: 1 MMQSTFP----ILSLAIWVPIVFGILVLALGRDSNPGLARWLALFGSLVGLVVTFPLIQH 56 M+QSTF +LSLAIW PI FG+L+LA GRD NPGL R AL GS+V +VT PLIQ Sbjct: 1 MIQSTFSASFSLLSLAIWCPIAFGVLILAFGRDDNPGLVRIAALIGSVVSFLVTLPLIQR 60 Query: 57 FDPLAHGYQFVEKTPWIDRFNISYFLGLDGISLWFVPLTAFITVIVVLAGWVVIQKRVAQ 116 FD AHG QF EK PWI+RFNI YFLG+DGISLW V LT+FIT+IVV++ W VIQK+VAQ Sbjct: 61 FDNAAHGMQFAEKMPWIERFNIQYFLGIDGISLWLVVLTSFITIIVVISAWEVIQKKVAQ 120 Query: 117 YMGAFLILSGIMVGVFSALDAMLFYAFFEATLIPMFIIVGVWGGDNRVYAAFKLFLYTLL 176 YMGAFLILSG+MVGVF ALD MLFY FFEATLIPMFII+GVWGG NRVYAA K FLYT Sbjct: 121 YMGAFLILSGLMVGVFCALDGMLFYVFFEATLIPMFIIIGVWGGGNRVYAAIKFFLYTFF 180 Query: 177 GSLLMLIALIYLYYVSGGSFEIPTWHQVPLSMLEQKILFFAFLAAFAVKVPMWPVHTWLP 236 GSLLML+AL+YLY+ SGGSF+I WH +PL + Q LF AFL AFAVKVPMWPVHTWLP Sbjct: 181 GSLLMLVALLYLYFASGGSFDITYWHDLPLPLNVQIPLFLAFLMAFAVKVPMWPVHTWLP 240 Query: 237 DAHVQAPTGGSIVLAAIMLKLGAYGFLRFSLPILPDASHALSGFMIFLSLVAVIYIGLVA 296 DAHV+APTGGS+VLAAIMLKLGAYGFLRFSLPI PDASH L+ MI LSL+AVIYIGLVA Sbjct: 241 DAHVEAPTGGSVVLAAIMLKLGAYGFLRFSLPITPDASHYLAPMMITLSLIAVIYIGLVA 300 Query: 297 LVQQDMKKLVAYSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMFMCIGVLYDQ 356 LVQ DMKKLVAYSSIAHMGFVTLGFF FNDMAVQGGIVQM+SHGFVS AMF+CIGVLYD+ Sbjct: 301 LVQTDMKKLVAYSSIAHMGFVTLGFFAFNDMAVQGGIVQMVSHGFVSAAMFLCIGVLYDR 360 Query: 357 MHTREISQYGGVVNKMPRFAFFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLA 416 MHTR I+ YGGVVN MP+FA FF+LFSLANCGLPATSGFVGEFMVILGA+KFNFWIGLLA Sbjct: 361 MHTRAIADYGGVVNTMPKFAAFFVLFSLANCGLPATSGFVGEFMVILGAIKFNFWIGLLA 420 Query: 417 ATALILGAAYSLWLAKRVIFGAVTNHHVAELVDLNGREFLILGLLAIATLVMGVYPGIIT 476 TALI GAAYSLWL KRVIFGAV N VA+L DL+ REF +LG+LAIA LVMGVYP IT Sbjct: 421 GTALIFGAAYSLWLVKRVIFGAVANPQVAKLKDLSLREFGMLGVLAIAVLVMGVYPAPIT 480 Query: 477 DSIQTSVTDLLKHVAVSKIN 496 D++QTSV DLL+HV++SK N Sbjct: 481 DAMQTSVADLLQHVSISKAN 500 >ref|ZP_06686346.1| NADH-quinone oxidoreductase subunit M [Achromobacter piechaudii ATCC 43553] gb|EFF76834.1| NADH-quinone oxidoreductase subunit M [Achromobacter piechaudii ATCC 43553] Length = 500 Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/495 (74%), Positives = 418/495 (84%) Query: 1 MMQSTFPILSLAIWVPIVFGILVLALGRDSNPGLARWLALFGSLVGLVVTFPLIQHFDPL 60 M +TFP L+LAI+VPIVFG+LVLA+GRD PGL R L+L G+ G +VT PL FD Sbjct: 6 MASNTFPWLTLAIFVPIVFGLLVLAVGRDDRPGLTRGLSLVGAFAGFLVTIPLYTGFDNT 65 Query: 61 AHGYQFVEKTPWIDRFNISYFLGLDGISLWFVPLTAFITVIVVLAGWVVIQKRVAQYMGA 120 QFVEK WI+ FN++Y LG+DGISLWFV LTAFIT+IVVLAGW VI RVAQYM A Sbjct: 66 TAAMQFVEKASWIEAFNVNYHLGIDGISLWFVLLTAFITIIVVLAGWEVITSRVAQYMAA 125 Query: 121 FLILSGIMVGVFSALDAMLFYAFFEATLIPMFIIVGVWGGDNRVYAAFKLFLYTLLGSLL 180 FLILSG+MVGVF+ALD MLFY FFEATLIPM+II+GVWGG NRVYAAFK FLYTL+GSLL Sbjct: 126 FLILSGLMVGVFAALDGMLFYVFFEATLIPMYIIIGVWGGPNRVYAAFKFFLYTLMGSLL 185 Query: 181 MLIALIYLYYVSGGSFEIPTWHQVPLSMLEQKILFFAFLAAFAVKVPMWPVHTWLPDAHV 240 LIA IYL++ SGGSF+I TWHQV L Q ++F A LAAFAVKVPMWPVHTWLPDAHV Sbjct: 186 TLIAFIYLWHASGGSFDILTWHQVKLGQTPQILIFVALLAAFAVKVPMWPVHTWLPDAHV 245 Query: 241 QAPTGGSIVLAAIMLKLGAYGFLRFSLPILPDASHALSGFMIFLSLVAVIYIGLVALVQQ 300 +APTGGSIVLAAIMLKLGAYGFLRFSLPI PDASH+L+G MI LSL+AVIYIGLVA++Q+ Sbjct: 246 EAPTGGSIVLAAIMLKLGAYGFLRFSLPITPDASHSLAGLMITLSLIAVIYIGLVAIIQE 305 Query: 301 DMKKLVAYSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMFMCIGVLYDQMHTR 360 DMKKLVAYSS+AHMGFVTLGFF+FN V+G IVQMISHGFVSGAMFMCIGVLYD+MH+R Sbjct: 306 DMKKLVAYSSVAHMGFVTLGFFIFNTAGVEGAIVQMISHGFVSGAMFMCIGVLYDRMHSR 365 Query: 361 EISQYGGVVNKMPRFAFFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLAATAL 420 I+ YGGVVN MPRFA FFILFS+AN GLPATSGFVGEFMVI+GAV+ NFWIGLLAATAL Sbjct: 366 RIADYGGVVNVMPRFATFFILFSMANSGLPATSGFVGEFMVIMGAVEHNFWIGLLAATAL 425 Query: 421 ILGAAYSLWLAKRVIFGAVTNHHVAELVDLNGREFLILGLLAIATLVMGVYPGIITDSIQ 480 ILGA+YSLW+ KRV+ G + N HV EL D+N REF+ILG++AIA L MG+YP TD + Sbjct: 426 ILGASYSLWMVKRVVLGDIANDHVRELTDINRREFVILGVMAIAVLYMGIYPKPFTDVMH 485 Query: 481 TSVTDLLKHVAVSKI 495 SV LL+HVAVSK+ Sbjct: 486 VSVEALLQHVAVSKL 500 >gb|EGP45256.1| NADH:ubiquinone oxidoreductase subunit M [Achromobacter xylosoxidans AXX-A] Length = 500 Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/495 (73%), Positives = 416/495 (84%) Query: 1 MMQSTFPILSLAIWVPIVFGILVLALGRDSNPGLARWLALFGSLVGLVVTFPLIQHFDPL 60 M +TFP L+LAI+VPIVFG+LVLA+GRD PGL R L+L GS+ G +VT PL FD Sbjct: 6 MASNTFPWLTLAIFVPIVFGLLVLAVGRDDRPGLTRGLSLVGSIAGFLVTIPLYTGFDSK 65 Query: 61 AHGYQFVEKTPWIDRFNISYFLGLDGISLWFVPLTAFITVIVVLAGWVVIQKRVAQYMGA 120 QFVEKT WI+ FN++Y LG+DGISLWFV LTAFIT+IVVLAGW VI RV+QYM A Sbjct: 66 TAAMQFVEKTSWIEAFNVNYHLGVDGISLWFVLLTAFITIIVVLAGWEVITSRVSQYMAA 125 Query: 121 FLILSGIMVGVFSALDAMLFYAFFEATLIPMFIIVGVWGGDNRVYAAFKLFLYTLLGSLL 180 FLILSG+MVGVF ALD MLFY FFEATLIPM+II+GVWGG NRVYAAFK FLYTL+GSLL Sbjct: 126 FLILSGLMVGVFCALDGMLFYVFFEATLIPMYIIIGVWGGPNRVYAAFKFFLYTLMGSLL 185 Query: 181 MLIALIYLYYVSGGSFEIPTWHQVPLSMLEQKILFFAFLAAFAVKVPMWPVHTWLPDAHV 240 L+A +YL++ SGGSF+I TW Q L Q ++F A LAAFAVKVPMWPVHTWLPDAHV Sbjct: 186 TLVAFVYLWHASGGSFDILTWQQTKLGYTPQILIFVALLAAFAVKVPMWPVHTWLPDAHV 245 Query: 241 QAPTGGSIVLAAIMLKLGAYGFLRFSLPILPDASHALSGFMIFLSLVAVIYIGLVALVQQ 300 +APTGGSIVLAAIMLKLGAYGFLRFSLPI PDASH+L+G MI LSL+AVIYIGLVA+VQ Sbjct: 246 EAPTGGSIVLAAIMLKLGAYGFLRFSLPIAPDASHSLAGMMITLSLIAVIYIGLVAIVQD 305 Query: 301 DMKKLVAYSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMFMCIGVLYDQMHTR 360 DMKKLVAYSS+AHMGFVTLGFF+FN V+G IVQMISHGFVSGAMFMCIGVLYD+MH+R Sbjct: 306 DMKKLVAYSSVAHMGFVTLGFFIFNTAGVEGAIVQMISHGFVSGAMFMCIGVLYDRMHSR 365 Query: 361 EISQYGGVVNKMPRFAFFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLAATAL 420 I+ YGGVVN MPRFA FFILFS+AN GLPATSGFVGEFMVI+GAV+ NFWIGLLAATAL Sbjct: 366 RIADYGGVVNVMPRFATFFILFSMANSGLPATSGFVGEFMVIMGAVEHNFWIGLLAATAL 425 Query: 421 ILGAAYSLWLAKRVIFGAVTNHHVAELVDLNGREFLILGLLAIATLVMGVYPGIITDSIQ 480 ILGA+YSLW+ KRV+ G + N HV EL D+N REF+ILG++AIA L MG+YP TD + Sbjct: 426 ILGASYSLWMVKRVVLGDIANDHVRELTDINRREFVILGVMAIAVLYMGIYPKPFTDVMH 485 Query: 481 TSVTDLLKHVAVSKI 495 SV LL+HVAVSK+ Sbjct: 486 VSVEALLQHVAVSKL 500 >ref|YP_001630297.1| NADH dehydrogenase subunit M [Bordetella petrii DSM 12804] emb|CAP42028.1| NADH-ubiquinone oxidoreductase, chain M [Bordetella petrii] Length = 500 Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/495 (74%), Positives = 415/495 (83%) Query: 1 MMQSTFPILSLAIWVPIVFGILVLALGRDSNPGLARWLALFGSLVGLVVTFPLIQHFDPL 60 M +TFP L+LAI+VPIVFG+LVLALGRD PGL R L+L G+L G VVT PL FD Sbjct: 6 MASNTFPWLTLAIFVPIVFGLLVLALGRDDRPGLTRGLSLVGALAGFVVTIPLYTGFDAS 65 Query: 61 AHGYQFVEKTPWIDRFNISYFLGLDGISLWFVPLTAFITVIVVLAGWVVIQKRVAQYMGA 120 QFVEK WI+ FN++Y LG+DGISLWFV LTAFIT+IVVLAGW VI RVAQYM A Sbjct: 66 TAAMQFVEKASWIEAFNVNYHLGIDGISLWFVLLTAFITIIVVLAGWEVITSRVAQYMAA 125 Query: 121 FLILSGIMVGVFSALDAMLFYAFFEATLIPMFIIVGVWGGDNRVYAAFKLFLYTLLGSLL 180 FLILSG+MVGVF+ALD +LFY FFEATLIPM+II+GVWGG NRVYAAFK FLYTLLGSLL Sbjct: 126 FLILSGLMVGVFAALDGLLFYVFFEATLIPMYIIIGVWGGPNRVYAAFKFFLYTLLGSLL 185 Query: 181 MLIALIYLYYVSGGSFEIPTWHQVPLSMLEQKILFFAFLAAFAVKVPMWPVHTWLPDAHV 240 L+A IYL+ SGGSF+I TWHQV L Q ++F A LAAFAVKVPMWPVHTWLPDAHV Sbjct: 186 TLVAFIYLWNASGGSFDIQTWHQVKLGYTPQVLIFVALLAAFAVKVPMWPVHTWLPDAHV 245 Query: 241 QAPTGGSIVLAAIMLKLGAYGFLRFSLPILPDASHALSGFMIFLSLVAVIYIGLVALVQQ 300 +APTGGS+VLAAIMLKLGAYGFLRFSLPI PDASH+L+G MI LSL+AVIYIGLVA+VQ Sbjct: 246 EAPTGGSVVLAAIMLKLGAYGFLRFSLPIAPDASHSLAGLMIALSLIAVIYIGLVAIVQD 305 Query: 301 DMKKLVAYSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMFMCIGVLYDQMHTR 360 DMKKLVAYSS+AHMGFVTLGFF+FN V+G IVQMISHGFVSGAMF CIGVLYD+MH+R Sbjct: 306 DMKKLVAYSSVAHMGFVTLGFFIFNTAGVEGAIVQMISHGFVSGAMFFCIGVLYDRMHSR 365 Query: 361 EISQYGGVVNKMPRFAFFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLAATAL 420 I+ YGGV+N MPRF FF+LFS+AN GLPATSGFVGEFMVI+GAV+ NFWIGLLAATAL Sbjct: 366 RIADYGGVINVMPRFVTFFVLFSMANSGLPATSGFVGEFMVIMGAVEHNFWIGLLAATAL 425 Query: 421 ILGAAYSLWLAKRVIFGAVTNHHVAELVDLNGREFLILGLLAIATLVMGVYPGIITDSIQ 480 ILGA+YSLW+ KRV FG + N HV EL D+N REFLILG++AIA L MG+YP TD + Sbjct: 426 ILGASYSLWMVKRVAFGDIANDHVRELSDVNRREFLILGVMAIAVLYMGIYPKPFTDVMH 485 Query: 481 TSVTDLLKHVAVSKI 495 SV LL+HVAVSK+ Sbjct: 486 ASVQALLQHVAVSKL 500 >ref|YP_003977523.1| NADH-quinone oxidoreductase subunit M [Achromobacter xylosoxidans A8] gb|ADP14808.1| NADH-quinone oxidoreductase subunit M [Achromobacter xylosoxidans A8] Length = 500 Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/495 (73%), Positives = 416/495 (84%) Query: 1 MMQSTFPILSLAIWVPIVFGILVLALGRDSNPGLARWLALFGSLVGLVVTFPLIQHFDPL 60 M +TFP L+LAI+VPIVFG+LVLA+GRD PGL R L+L G++ G +VT PL FD Sbjct: 6 MASNTFPWLTLAIFVPIVFGLLVLAVGRDDRPGLTRGLSLVGAIAGFLVTIPLYTGFDST 65 Query: 61 AHGYQFVEKTPWIDRFNISYFLGLDGISLWFVPLTAFITVIVVLAGWVVIQKRVAQYMGA 120 QFVEKT WI+ FN++Y LG+DGIS+WFV LTAFIT+IVVLAGW VI RVAQYM A Sbjct: 66 TAKMQFVEKTSWIEAFNVNYHLGIDGISMWFVLLTAFITIIVVLAGWEVITSRVAQYMAA 125 Query: 121 FLILSGIMVGVFSALDAMLFYAFFEATLIPMFIIVGVWGGDNRVYAAFKLFLYTLLGSLL 180 FLILSG+MVGVF ALD MLFY FFEATLIPM+II+GVWGG NRVYAAFK FLYTL+GSLL Sbjct: 126 FLILSGLMVGVFCALDGMLFYVFFEATLIPMYIIIGVWGGPNRVYAAFKFFLYTLMGSLL 185 Query: 181 MLIALIYLYYVSGGSFEIPTWHQVPLSMLEQKILFFAFLAAFAVKVPMWPVHTWLPDAHV 240 L+A +YL+ VSGGSF+I TW Q L Q ++F A LAAFAVKVPMWPVHTWLPDAHV Sbjct: 186 TLVAFVYLWNVSGGSFDILTWQQTKLGYTPQILIFVALLAAFAVKVPMWPVHTWLPDAHV 245 Query: 241 QAPTGGSIVLAAIMLKLGAYGFLRFSLPILPDASHALSGFMIFLSLVAVIYIGLVALVQQ 300 +APTGGSIVLAAIMLKLGAYGFLRFSLPI PDASH+L+G MI LSL+AVIYIGLVA+VQ Sbjct: 246 EAPTGGSIVLAAIMLKLGAYGFLRFSLPIAPDASHSLAGMMITLSLIAVIYIGLVAIVQD 305 Query: 301 DMKKLVAYSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMFMCIGVLYDQMHTR 360 DMKKLVAYSS+AHMGFVTLGFF+FN V+G IVQMISHGFVSGAMFMCIGVLYD+MH+R Sbjct: 306 DMKKLVAYSSVAHMGFVTLGFFIFNTAGVEGAIVQMISHGFVSGAMFMCIGVLYDRMHSR 365 Query: 361 EISQYGGVVNKMPRFAFFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLAATAL 420 I+ YGGVVN MPRFA FFILFS+AN GLPATSGFVGEFMVI+GAV+ NFWIGLLAATAL Sbjct: 366 RIADYGGVVNVMPRFATFFILFSMANSGLPATSGFVGEFMVIMGAVEHNFWIGLLAATAL 425 Query: 421 ILGAAYSLWLAKRVIFGAVTNHHVAELVDLNGREFLILGLLAIATLVMGVYPGIITDSIQ 480 ILGA+YSLW+ KRV+ G V N HV EL D+N REF+ILG++AIA L MG+YP TD + Sbjct: 426 ILGASYSLWMVKRVVLGDVANDHVRELTDINRREFVILGVMAIAVLYMGIYPKPFTDVMH 485 Query: 481 TSVTDLLKHVAVSKI 495 SV LL+HVAVSK+ Sbjct: 486 VSVEALLQHVAVSKL 500 >gb|EFV82600.1| NADH-ubiquinone oxidoreductase [Achromobacter xylosoxidans C54] Length = 495 Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/495 (73%), Positives = 415/495 (83%) Query: 1 MMQSTFPILSLAIWVPIVFGILVLALGRDSNPGLARWLALFGSLVGLVVTFPLIQHFDPL 60 M +TFP L+LAI+VPIVFG+LVLA+GRD PGL R L+L GS+ G +VT PL FD Sbjct: 1 MASNTFPWLTLAIFVPIVFGLLVLAVGRDDRPGLTRGLSLIGSIAGFLVTIPLYTGFDSK 60 Query: 61 AHGYQFVEKTPWIDRFNISYFLGLDGISLWFVPLTAFITVIVVLAGWVVIQKRVAQYMGA 120 QFVEKT WI+ FN++Y LG+DGISLWFV LTAFIT+IVVLAGW VI RV+QYM A Sbjct: 61 TAAMQFVEKTSWIEAFNVNYHLGVDGISLWFVLLTAFITIIVVLAGWEVITSRVSQYMAA 120 Query: 121 FLILSGIMVGVFSALDAMLFYAFFEATLIPMFIIVGVWGGDNRVYAAFKLFLYTLLGSLL 180 FLILSG+MVGVF ALD MLFY FFEATLIPM+II+GVWGG NRVYAAFK FLYTL+GSLL Sbjct: 121 FLILSGLMVGVFCALDGMLFYVFFEATLIPMYIIIGVWGGPNRVYAAFKFFLYTLMGSLL 180 Query: 181 MLIALIYLYYVSGGSFEIPTWHQVPLSMLEQKILFFAFLAAFAVKVPMWPVHTWLPDAHV 240 L+A +YL+ SGGSF+I TW Q L Q ++F A LAAFAVKVPMWPVHTWLPDAHV Sbjct: 181 TLVAFVYLWNASGGSFDILTWQQTKLGYTPQILIFVALLAAFAVKVPMWPVHTWLPDAHV 240 Query: 241 QAPTGGSIVLAAIMLKLGAYGFLRFSLPILPDASHALSGFMIFLSLVAVIYIGLVALVQQ 300 +APTGGSIVLAAIMLKLGAYGFLRFSLPI PDASH+L+G MI LSL+AVIYIGLVA+VQ Sbjct: 241 EAPTGGSIVLAAIMLKLGAYGFLRFSLPIAPDASHSLAGLMITLSLIAVIYIGLVAIVQD 300 Query: 301 DMKKLVAYSSIAHMGFVTLGFFMFNDMAVQGGIVQMISHGFVSGAMFMCIGVLYDQMHTR 360 DMKKLVAYSS+AHMGFVTLGFF+FN V+G IVQMISHGFVSGAMFMCIGVLYD+MH+R Sbjct: 301 DMKKLVAYSSVAHMGFVTLGFFIFNTAGVEGAIVQMISHGFVSGAMFMCIGVLYDRMHSR 360 Query: 361 EISQYGGVVNKMPRFAFFFILFSLANCGLPATSGFVGEFMVILGAVKFNFWIGLLAATAL 420 I+ YGGVVN MPRFA FFILFS+AN GLPATSGFVGEFMVI+GAV+ NFWIGLLAATAL Sbjct: 361 RIADYGGVVNVMPRFATFFILFSMANSGLPATSGFVGEFMVIMGAVEHNFWIGLLAATAL 420 Query: 421 ILGAAYSLWLAKRVIFGAVTNHHVAELVDLNGREFLILGLLAIATLVMGVYPGIITDSIQ 480 ILGA+YSLW+ KRV+ G V N HV EL D+N REF+ILG++AIA L MG++P TD + Sbjct: 421 ILGASYSLWMVKRVVLGDVANDHVRELTDINRREFVILGVMAIAVLYMGIHPKPFTDVMH 480 Query: 481 TSVTDLLKHVAVSKI 495 SV LL+HVAVSK+ Sbjct: 481 VSVEALLQHVAVSKL 495