BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0331.p (162 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775195.1| NADH dehydrogenase I subunit I [Herbaspirill... 333 7e-90 ref|YP_001353160.1| NADH dehydrogenase subunit I [Janthinobacter... 301 2e-80 ref|YP_001100098.1| NADH dehydrogenase subunit I [Herminiimonas ... 298 2e-79 ref|ZP_08275180.1| NADH-ubiquinone oxidoreductase chain I [Oxalo... 298 2e-79 emb|CAQ36048.1| nadh dehydrogenaseI(chainI protein [Ralstonia so... 297 5e-79 ref|NP_520175.1| NADH dehydrogenase subunit I [Ralstonia solanac... 295 1e-78 ref|YP_981667.1| NADH dehydrogenase subunit I [Polaromonas napht... 295 1e-78 ref|YP_003745252.1| NADH-quinone oxidoreductase subunit i [Ralst... 295 1e-78 ref|YP_003752028.1| NADH-quinone oxidoreductase subunit I [Ralst... 294 3e-78 emb|CCA84428.1| NADH-quinone oxidoreductase subunit I [Ralstonia... 293 6e-78 >ref|YP_003775195.1| NADH dehydrogenase I subunit I [Herbaspirillum seropedicae SmR1] gb|ADJ63287.1| NADH dehydrogenase I (Chain I) oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 162 Score = 333 bits (853), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 162/162 (100%), Positives = 162/162 (100%) Query: 1 MEAIKDFFGSLMLRELFKGLALTGRYLFKRKITVQFPEEKTPMSPRFRGLHALRRYPNGE 60 MEAIKDFFGSLMLRELFKGLALTGRYLFKRKITVQFPEEKTPMSPRFRGLHALRRYPNGE Sbjct: 1 MEAIKDFFGSLMLRELFKGLALTGRYLFKRKITVQFPEEKTPMSPRFRGLHALRRYPNGE 60 Query: 61 ERCIACKLCEAVCPAMAITIESEQRADGTRRTSRYDIDLTKCIFCGFCEESCPVDSIVET 120 ERCIACKLCEAVCPAMAITIESEQRADGTRRTSRYDIDLTKCIFCGFCEESCPVDSIVET Sbjct: 61 ERCIACKLCEAVCPAMAITIESEQRADGTRRTSRYDIDLTKCIFCGFCEESCPVDSIVET 120 Query: 121 HILEYHGEKRGDLYYTKEMLLAVGDRYENEIAAARAADAAYR 162 HILEYHGEKRGDLYYTKEMLLAVGDRYENEIAAARAADAAYR Sbjct: 121 HILEYHGEKRGDLYYTKEMLLAVGDRYENEIAAARAADAAYR 162 >ref|YP_001353160.1| NADH dehydrogenase subunit I [Janthinobacterium sp. Marseille] gb|ABR89202.1| NADH dehydrogenase I chain I [Janthinobacterium sp. Marseille] Length = 162 Score = 301 bits (771), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 154/162 (95%), Positives = 157/162 (96%) Query: 1 MEAIKDFFGSLMLRELFKGLALTGRYLFKRKITVQFPEEKTPMSPRFRGLHALRRYPNGE 60 MEAIKDFFGSLMLRELFKGLALTGRY+F RKITVQFPEEKTP SPRFRGLHALRRYPNGE Sbjct: 1 MEAIKDFFGSLMLRELFKGLALTGRYMFARKITVQFPEEKTPQSPRFRGLHALRRYPNGE 60 Query: 61 ERCIACKLCEAVCPAMAITIESEQRADGTRRTSRYDIDLTKCIFCGFCEESCPVDSIVET 120 ERCIACKLCEAVCPAMAITIES+QR DGTRRT+RYDIDLTKCIFCGFCEESCPVDSIVET Sbjct: 61 ERCIACKLCEAVCPAMAITIESDQREDGTRRTTRYDIDLTKCIFCGFCEESCPVDSIVET 120 Query: 121 HILEYHGEKRGDLYYTKEMLLAVGDRYENEIAAARAADAAYR 162 HILEYHGEKRGDLYYTKEMLLAVGDRYE EIAAAR ADAAYR Sbjct: 121 HILEYHGEKRGDLYYTKEMLLAVGDRYEPEIAAARTADAAYR 162 >ref|YP_001100098.1| NADH dehydrogenase subunit I [Herminiimonas arsenicoxydans] sp|A4G636.1|NUOI_HERAR RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I emb|CAL61973.1| NADH-quinone oxidoreductase subunit I (NADH dehydrogenase I subunit I) (NDH-1 subunit I) [Herminiimonas arsenicoxydans] Length = 162 Score = 298 bits (762), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 150/162 (92%), Positives = 155/162 (95%) Query: 1 MEAIKDFFGSLMLRELFKGLALTGRYLFKRKITVQFPEEKTPMSPRFRGLHALRRYPNGE 60 MEAIKDFFGSLMLRE+ KG+ALTGRY+F RKITVQFPEEKTP SPRFRGLHALRRYPNGE Sbjct: 1 MEAIKDFFGSLMLREMLKGMALTGRYMFSRKITVQFPEEKTPQSPRFRGLHALRRYPNGE 60 Query: 61 ERCIACKLCEAVCPAMAITIESEQRADGTRRTSRYDIDLTKCIFCGFCEESCPVDSIVET 120 ERCIACKLCEAVCPAMAITIESEQR DG+RRT+RYDIDLTKCIFCGFCEESCPVDSIVET Sbjct: 61 ERCIACKLCEAVCPAMAITIESEQRDDGSRRTTRYDIDLTKCIFCGFCEESCPVDSIVET 120 Query: 121 HILEYHGEKRGDLYYTKEMLLAVGDRYENEIAAARAADAAYR 162 HI EYHGEKRGDLYYTKEMLLAVGDRYE EIAAAR ADAAYR Sbjct: 121 HIFEYHGEKRGDLYYTKEMLLAVGDRYETEIAAARTADAAYR 162 >ref|ZP_08275180.1| NADH-ubiquinone oxidoreductase chain I [Oxalobacteraceae bacterium IMCC9480] gb|EGF31351.1| NADH-ubiquinone oxidoreductase chain I [Oxalobacteraceae bacterium IMCC9480] Length = 162 Score = 298 bits (762), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 151/162 (93%), Positives = 156/162 (96%) Query: 1 MEAIKDFFGSLMLRELFKGLALTGRYLFKRKITVQFPEEKTPMSPRFRGLHALRRYPNGE 60 MEAIKDFF SLMLRELFKG+ALTGRY+F RKITVQFPEEKTP SPRFRGLHALRRYPNGE Sbjct: 1 MEAIKDFFSSLMLRELFKGMALTGRYMFARKITVQFPEEKTPQSPRFRGLHALRRYPNGE 60 Query: 61 ERCIACKLCEAVCPAMAITIESEQRADGTRRTSRYDIDLTKCIFCGFCEESCPVDSIVET 120 ERCIACKLCEAVCPAMAITIESEQR DG+RRT+RYDIDLTKCIFCGFCEESCPVDSIVET Sbjct: 61 ERCIACKLCEAVCPAMAITIESEQRDDGSRRTTRYDIDLTKCIFCGFCEESCPVDSIVET 120 Query: 121 HILEYHGEKRGDLYYTKEMLLAVGDRYENEIAAARAADAAYR 162 ILEYHGEKRGDLYYTKEMLLAVGDRYEN+IAAARAADA YR Sbjct: 121 SILEYHGEKRGDLYYTKEMLLAVGDRYENDIAAARAADAPYR 162 >emb|CAQ36048.1| nadh dehydrogenaseI(chainI protein [Ralstonia solanacearum MolK2] Length = 163 Score = 297 bits (760), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 141/160 (88%), Positives = 153/160 (95%) Query: 3 AIKDFFGSLMLRELFKGLALTGRYLFKRKITVQFPEEKTPMSPRFRGLHALRRYPNGEER 62 AIK+FF SL+L+ELFKGLALTGRYLF RKITV FPEEKTP+SPRFRGLHALRRYPNGEER Sbjct: 4 AIKEFFNSLLLKELFKGLALTGRYLFARKITVLFPEEKTPLSPRFRGLHALRRYPNGEER 63 Query: 63 CIACKLCEAVCPAMAITIESEQRADGTRRTSRYDIDLTKCIFCGFCEESCPVDSIVETHI 122 CIACKLCEAVCPA+AITIES+QR DGTRRT+RYDIDLTKCIFCGFCEE+CPVD+IVETHI Sbjct: 64 CIACKLCEAVCPALAITIESDQRDDGTRRTTRYDIDLTKCIFCGFCEEACPVDAIVETHI 123 Query: 123 LEYHGEKRGDLYYTKEMLLAVGDRYENEIAAARAADAAYR 162 LEYHGEKRGDLY+TKEMLLAVGDR+E EIAA +AADA YR Sbjct: 124 LEYHGEKRGDLYFTKEMLLAVGDRFEPEIAANKAADAKYR 163 >ref|NP_520175.1| NADH dehydrogenase subunit I [Ralstonia solanacearum GMI1000] ref|ZP_00943358.1| NADH-quinone oxidoreductase chain I [Ralstonia solanacearum UW551] ref|YP_001899772.1| NADH dehydrogenase subunit I [Ralstonia pickettii 12J] ref|YP_002259135.1| nadh dehydrogenaseI(chainI protein [Ralstonia solanacearum IPO1609] ref|YP_002981836.1| NADH dehydrogenase subunit I [Ralstonia pickettii 12D] ref|ZP_07676593.1| NADH dehydrogenase (ubiquinone), I subunit [Ralstonia sp. 5_7_47FAA] sp|Q8XXQ9.1|NUOI_RALSO RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I emb|CAD15761.1| probable nadh dehydrogenaseI(chainI oxidoreductase protein [Ralstonia solanacearum GMI1000] gb|EAP74180.1| NADH-quinone oxidoreductase chain I [Ralstonia solanacearum UW551] gb|ACD27340.1| NADH-quinone oxidoreductase, chain I [Ralstonia pickettii 12J] emb|CAQ61064.1| nadh dehydrogenaseI(chainI protein [Ralstonia solanacearum IPO1609] gb|ACS63164.1| NADH-quinone oxidoreductase, chain I [Ralstonia pickettii 12D] emb|CBJ37525.1| NADH-quinone oxidoreductase subunit I [Ralstonia solanacearum CMR15] gb|EFP65165.1| NADH dehydrogenase (ubiquinone), I subunit [Ralstonia sp. 5_7_47FAA] gb|AEG68680.1| NADH dehydrogenase subunit I [Ralstonia solanacearum Po82] Length = 163 Score = 295 bits (756), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 140/160 (87%), Positives = 153/160 (95%) Query: 3 AIKDFFGSLMLRELFKGLALTGRYLFKRKITVQFPEEKTPMSPRFRGLHALRRYPNGEER 62 AIK+FF SL+L+ELFKGLALTGRYLF RKITV FPEEKTP+SPRFRGLHALRRYPNGEER Sbjct: 4 AIKEFFNSLLLKELFKGLALTGRYLFARKITVLFPEEKTPLSPRFRGLHALRRYPNGEER 63 Query: 63 CIACKLCEAVCPAMAITIESEQRADGTRRTSRYDIDLTKCIFCGFCEESCPVDSIVETHI 122 CIACKLCEAVCPA+AITIES+QR DGTRRT+RYDIDLTKCIFCGFCEE+CPVD+IVETHI Sbjct: 64 CIACKLCEAVCPALAITIESDQRDDGTRRTTRYDIDLTKCIFCGFCEEACPVDAIVETHI 123 Query: 123 LEYHGEKRGDLYYTKEMLLAVGDRYENEIAAARAADAAYR 162 LEYHGEKRGDLY+TK+MLLAVGDR+E EIAA +AADA YR Sbjct: 124 LEYHGEKRGDLYFTKDMLLAVGDRFEPEIAANKAADAKYR 163 >ref|YP_981667.1| NADH dehydrogenase subunit I [Polaromonas naphthalenivorans CJ2] sp|A1VM68.1|NUOI_POLNA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gb|ABM36746.1| NADH dehydrogenase subunit I [Polaromonas naphthalenivorans CJ2] Length = 165 Score = 295 bits (756), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 138/160 (86%), Positives = 149/160 (93%) Query: 3 AIKDFFGSLMLRELFKGLALTGRYLFKRKITVQFPEEKTPMSPRFRGLHALRRYPNGEER 62 ++KDF S ML EL KG+ALTG+Y+F RKIT+QFPEEKTP+SPRFRGLHALRRY NGEER Sbjct: 6 SVKDFVSSFMLTELLKGMALTGKYMFSRKITIQFPEEKTPLSPRFRGLHALRRYENGEER 65 Query: 63 CIACKLCEAVCPAMAITIESEQRADGTRRTSRYDIDLTKCIFCGFCEESCPVDSIVETHI 122 CIACKLCEAVCPA+AITIES+ R DG+RRTSRYDIDLTKCIFCGFCEESCPVDSIVETHI Sbjct: 66 CIACKLCEAVCPALAITIESDVREDGSRRTSRYDIDLTKCIFCGFCEESCPVDSIVETHI 125 Query: 123 LEYHGEKRGDLYYTKEMLLAVGDRYENEIAAARAADAAYR 162 LEYHGEKRGDLY+TKEMLLAVGDRYENEIAA RAADA YR Sbjct: 126 LEYHGEKRGDLYFTKEMLLAVGDRYENEIAANRAADAKYR 165 >ref|YP_003745252.1| NADH-quinone oxidoreductase subunit i [Ralstonia solanacearum CFBP2957] emb|CBJ42631.1| NADH-quinone oxidoreductase subunit I [Ralstonia solanacearum CFBP2957] Length = 163 Score = 295 bits (756), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 140/160 (87%), Positives = 153/160 (95%) Query: 3 AIKDFFGSLMLRELFKGLALTGRYLFKRKITVQFPEEKTPMSPRFRGLHALRRYPNGEER 62 AIK+FF SL+L+ELFKGLALTGRYLF RKITV FPEEKTP+SPRFRGLHALRRYPNGEER Sbjct: 4 AIKEFFNSLLLKELFKGLALTGRYLFARKITVFFPEEKTPLSPRFRGLHALRRYPNGEER 63 Query: 63 CIACKLCEAVCPAMAITIESEQRADGTRRTSRYDIDLTKCIFCGFCEESCPVDSIVETHI 122 CIACKLCEAVCPA+AITIES+QR DGTRRT+RYDIDLTKCIFCGFCEE+CPVD+IVETHI Sbjct: 64 CIACKLCEAVCPALAITIESDQRDDGTRRTTRYDIDLTKCIFCGFCEEACPVDAIVETHI 123 Query: 123 LEYHGEKRGDLYYTKEMLLAVGDRYENEIAAARAADAAYR 162 LEYHGEKRGDLY+TK+MLLAVGDR+E EIAA +AADA YR Sbjct: 124 LEYHGEKRGDLYFTKDMLLAVGDRFEPEIAANKAADAKYR 163 >ref|YP_003752028.1| NADH-quinone oxidoreductase subunit I [Ralstonia solanacearum PSI07] emb|CBJ50736.1| NADH-quinone oxidoreductase subunit I [Ralstonia solanacearum PSI07] emb|CCA82003.1| NADH-quinone oxidoreductase subunit I [blood disease bacterium R229] Length = 163 Score = 294 bits (753), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 140/160 (87%), Positives = 152/160 (95%) Query: 3 AIKDFFGSLMLRELFKGLALTGRYLFKRKITVQFPEEKTPMSPRFRGLHALRRYPNGEER 62 AIK+FF SL+L+ELFKGLALTGRYLF RKITV FPEEKTP+SPRFRGLHALRRYPNGEER Sbjct: 4 AIKEFFNSLLLKELFKGLALTGRYLFARKITVLFPEEKTPLSPRFRGLHALRRYPNGEER 63 Query: 63 CIACKLCEAVCPAMAITIESEQRADGTRRTSRYDIDLTKCIFCGFCEESCPVDSIVETHI 122 CIACKLCEAVCPA+AITIES+ R DGTRRT+RYDIDLTKCIFCGFCEE+CPVD+IVETHI Sbjct: 64 CIACKLCEAVCPALAITIESDLRDDGTRRTTRYDIDLTKCIFCGFCEEACPVDAIVETHI 123 Query: 123 LEYHGEKRGDLYYTKEMLLAVGDRYENEIAAARAADAAYR 162 LEYHGEKRGDLY+TKEMLLAVGDR+E EIAA +AADA YR Sbjct: 124 LEYHGEKRGDLYFTKEMLLAVGDRFEPEIAANKAADAKYR 163 >emb|CCA84428.1| NADH-quinone oxidoreductase subunit I [Ralstonia syzygii R24] Length = 163 Score = 293 bits (750), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 139/160 (86%), Positives = 152/160 (95%) Query: 3 AIKDFFGSLMLRELFKGLALTGRYLFKRKITVQFPEEKTPMSPRFRGLHALRRYPNGEER 62 AIK+FF SL+L+ELFKGLALTGRYLF RKITV FPEEKTP+SPRFRGLHALRRYPNGEER Sbjct: 4 AIKEFFNSLLLKELFKGLALTGRYLFARKITVLFPEEKTPLSPRFRGLHALRRYPNGEER 63 Query: 63 CIACKLCEAVCPAMAITIESEQRADGTRRTSRYDIDLTKCIFCGFCEESCPVDSIVETHI 122 CIACKLCEAVCPA+AITIES+ R DGTRRT+RYDIDLTKCIFCGFCEE+CPVD+IVETHI Sbjct: 64 CIACKLCEAVCPALAITIESDLRDDGTRRTTRYDIDLTKCIFCGFCEEACPVDAIVETHI 123 Query: 123 LEYHGEKRGDLYYTKEMLLAVGDRYENEIAAARAADAAYR 162 LEYHGEKRGDLY+TK+MLLAVGDR+E EIAA +AADA YR Sbjct: 124 LEYHGEKRGDLYFTKDMLLAVGDRFEPEIAANKAADAKYR 163