BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0328.p (431 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775192.1| NADH dehydrogenase I subunit F [Herbaspirill... 891 0.0 ref|YP_002981839.1| NADH-quinone oxidoreductase subunit F [Ralst... 788 0.0 ref|YP_001899775.1| NADH-quinone oxidoreductase subunit F [Ralst... 787 0.0 ref|YP_583087.1| NADH:ubiquinone oxidoreductase, chain F [Cupria... 786 0.0 ref|ZP_00943355.1| NADH-quinone oxidoreductase chain F [Ralstoni... 785 0.0 ref|YP_003745249.1| NADH-quinone oxidoreductase subunit f [Ralst... 785 0.0 ref|NP_520178.1| NADH dehydrogenase I chain F [Ralstonia solanac... 784 0.0 emb|CBJ37522.1| NADH-quinone oxidoreductase subunit F [Ralstonia... 784 0.0 ref|YP_003604566.1| NADH-quinone oxidoreductase, F subunit [Burk... 783 0.0 ref|ZP_02362301.1| NADH-quinone oxidoreductase, F subunit [Burkh... 783 0.0 >ref|YP_003775192.1| NADH dehydrogenase I subunit F [Herbaspirillum seropedicae SmR1] gb|ADJ63284.1| NADH dehydrogenase I (chain F) oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 431 Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/431 (99%), Positives = 431/431 (100%) Query: 1 MTCLHDRHIKPLILADLNGENWHLEDYVKRGGYESLKRILNEKITPEQVIADLKASGLRG 60 MTCLHDRHIKPLILADLNGENWHLEDYVKRGGYESLKRILNEKITPEQVIADLKASGLRG Sbjct: 1 MTCLHDRHIKPLILADLNGENWHLEDYVKRGGYESLKRILNEKITPEQVIADLKASGLRG 60 Query: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYA 120 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYA Sbjct: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYA 120 Query: 121 MGITVGYNYIHGEIFSAYERFEEALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGE 180 MGITVGYNYIHGEIFSAYERFEEALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGE Sbjct: 121 MGITVGYNYIHGEIFSAYERFEEALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGE 180 Query: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFIFKVGPQAYAEMGKP 240 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFIFKVGPQAYAEMGKP Sbjct: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFIFKVGPQAYAEMGKP 240 Query: 241 NNGGTKIFSISGDVERPGNYEIPLGTPFSTLLELAGGMRGGKKIKAVIPGGSSAPVIRGD 300 NNGGTKIFSISGDVERPGNYEIPLGTPFSTLLELAGGMRGGKKIKAVIPGGSSAPVIRGD Sbjct: 241 NNGGTKIFSISGDVERPGNYEIPLGTPFSTLLELAGGMRGGKKIKAVIPGGSSAPVIRGD 300 Query: 301 VMMDTTMDYDAIAKAGSMLGSGAVIVMDDTRCMVKSLLRLSYFYYEESCGQCTPCREGTG 360 VMMDTTMDYDAIAKAGSMLGSGAVIVMD+TRCMVKSLLRLSYFYYEESCGQCTPCREGTG Sbjct: 301 VMMDTTMDYDAIAKAGSMLGSGAVIVMDETRCMVKSLLRLSYFYYEESCGQCTPCREGTG 360 Query: 361 WMYRMVERIENGHGKMEDLDVLNSVADNIQGRTICALGDAAAMPVRAFVKNFREEFEYHI 420 WMYRMVERIENGHGKMEDLDVLNSVADNIQGRTICALGDAAAMPVRAFVKNFREEFEYHI Sbjct: 361 WMYRMVERIENGHGKMEDLDVLNSVADNIQGRTICALGDAAAMPVRAFVKNFREEFEYHI 420 Query: 421 EHKHCLVPAYI 431 EHKHCLVPAYI Sbjct: 421 EHKHCLVPAYI 431 >ref|YP_002981839.1| NADH-quinone oxidoreductase subunit F [Ralstonia pickettii 12D] ref|ZP_07676590.1| NADH oxidoreductase (quinone), F subunit [Ralstonia sp. 5_7_47FAA] gb|ACS63167.1| NADH-quinone oxidoreductase, F subunit [Ralstonia pickettii 12D] gb|EFP65162.1| NADH oxidoreductase (quinone), F subunit [Ralstonia sp. 5_7_47FAA] Length = 431 Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/431 (85%), Positives = 405/431 (93%) Query: 1 MTCLHDRHIKPLILADLNGENWHLEDYVKRGGYESLKRILNEKITPEQVIADLKASGLRG 60 MT LHDRHI+PLILA LNG+NWHLEDYVKRGGY+ LKRIL EKITPEQVIAD+KASGLRG Sbjct: 1 MTSLHDRHIQPLILAGLNGDNWHLEDYVKRGGYQQLKRILTEKITPEQVIADVKASGLRG 60 Query: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYA 120 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGM IGGYA Sbjct: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMAIGGYA 120 Query: 121 MGITVGYNYIHGEIFSAYERFEEALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGE 180 MGITVGYNYIHGEI++ Y+ FE+ALEEARAAGFLGDNILG+GF+FQLHAHHGYGAYICGE Sbjct: 121 MGITVGYNYIHGEIWNEYKIFEQALEEARAAGFLGDNILGSGFNFQLHAHHGYGAYICGE 180 Query: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFIFKVGPQAYAEMGKP 240 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPF+ +GP Y +MGKP Sbjct: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFLLAIGPDNYLKMGKP 240 Query: 241 NNGGTKIFSISGDVERPGNYEIPLGTPFSTLLELAGGMRGGKKIKAVIPGGSSAPVIRGD 300 NNGG+KIFS+SGDVERPGNYEIPLGTPFS LLELAGGMRGGKK+KAVIPGGSSAPV+ D Sbjct: 241 NNGGSKIFSVSGDVERPGNYEIPLGTPFSKLLELAGGMRGGKKLKAVIPGGSSAPVVPAD 300 Query: 301 VMMDTTMDYDAIAKAGSMLGSGAVIVMDDTRCMVKSLLRLSYFYYEESCGQCTPCREGTG 360 +MM + MDYD+IAKAGSMLGSGAVIVMD+TRCMVKSLLRLSYFYYEESCGQCTPCREGTG Sbjct: 301 LMMASDMDYDSIAKAGSMLGSGAVIVMDETRCMVKSLLRLSYFYYEESCGQCTPCREGTG 360 Query: 361 WMYRMVERIENGHGKMEDLDVLNSVADNIQGRTICALGDAAAMPVRAFVKNFREEFEYHI 420 W+YR+V+RIE+G G+ EDLD+LN+VA+NI GRTICALGDAAAMPVR +K++ +EF YH+ Sbjct: 361 WLYRVVDRIEHGKGRQEDLDLLNNVAENIMGRTICALGDAAAMPVRGMLKHYWDEFAYHV 420 Query: 421 EHKHCLVPAYI 431 EHK C+VP Y+ Sbjct: 421 EHKQCMVPTYL 431 >ref|YP_001899775.1| NADH-quinone oxidoreductase subunit F [Ralstonia pickettii 12J] gb|ACD27343.1| NADH-quinone oxidoreductase, F subunit [Ralstonia pickettii 12J] Length = 431 Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/431 (85%), Positives = 405/431 (93%) Query: 1 MTCLHDRHIKPLILADLNGENWHLEDYVKRGGYESLKRILNEKITPEQVIADLKASGLRG 60 MT LHDRHI+PLILA LNG+NWHLEDYVKRGGY+ LKRIL EKITPEQVIAD+KASGLRG Sbjct: 1 MTSLHDRHIQPLILAGLNGDNWHLEDYVKRGGYQQLKRILTEKITPEQVIADVKASGLRG 60 Query: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYA 120 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGM IGGYA Sbjct: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMAIGGYA 120 Query: 121 MGITVGYNYIHGEIFSAYERFEEALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGE 180 MGITVGYNYIHGEI++ Y+ FE+ALEEARAAGFLGDNILG+GF+FQLHAHHGYGAYICGE Sbjct: 121 MGITVGYNYIHGEIWNEYKIFEQALEEARAAGFLGDNILGSGFNFQLHAHHGYGAYICGE 180 Query: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFIFKVGPQAYAEMGKP 240 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPF+ +GP Y +MGKP Sbjct: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFLLAIGPDNYLKMGKP 240 Query: 241 NNGGTKIFSISGDVERPGNYEIPLGTPFSTLLELAGGMRGGKKIKAVIPGGSSAPVIRGD 300 NNGG+KIFS+SGDVERPGNYEIPLGTPFS LLELAGGMRGGKK+KAVIPGGSSAPV+ D Sbjct: 241 NNGGSKIFSVSGDVERPGNYEIPLGTPFSKLLELAGGMRGGKKLKAVIPGGSSAPVVPAD 300 Query: 301 VMMDTTMDYDAIAKAGSMLGSGAVIVMDDTRCMVKSLLRLSYFYYEESCGQCTPCREGTG 360 +MM + MDYD+IAKAGSMLGSGAVIVMD+TRCMVKSLLRLSYFY+EESCGQCTPCREGTG Sbjct: 301 LMMASDMDYDSIAKAGSMLGSGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTG 360 Query: 361 WMYRMVERIENGHGKMEDLDVLNSVADNIQGRTICALGDAAAMPVRAFVKNFREEFEYHI 420 W+YR+V+RIE+G G+ EDLD+LN+VA+NI GRTICALGDAAAMPVR +K++ +EF YH+ Sbjct: 361 WLYRVVDRIEHGKGRQEDLDLLNNVAENIMGRTICALGDAAAMPVRGMLKHYWDEFAYHV 420 Query: 421 EHKHCLVPAYI 431 EHK C+VP YI Sbjct: 421 EHKQCMVPTYI 431 >ref|YP_583087.1| NADH:ubiquinone oxidoreductase, chain F [Cupriavidus metallidurans CH34] gb|ABF07818.1| NADH:ubiquinone oxidoreductase, chain F [Cupriavidus metallidurans CH34] Length = 431 Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/430 (85%), Positives = 406/430 (94%) Query: 1 MTCLHDRHIKPLILADLNGENWHLEDYVKRGGYESLKRILNEKITPEQVIADLKASGLRG 60 MT LHDRHIKPLILA L+G+NWHLEDYVKRGGY+ L+RIL EK+TPEQVIAD+KASGLRG Sbjct: 1 MTSLHDRHIKPLILAGLDGKNWHLEDYVKRGGYKQLRRILEEKVTPEQVIADVKASGLRG 60 Query: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYA 120 RGGAGFPTGLKWSFMPR FPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGM IG YA Sbjct: 61 RGGAGFPTGLKWSFMPRAFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMAIGAYA 120 Query: 121 MGITVGYNYIHGEIFSAYERFEEALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGE 180 MGITVGYNYIHGEI++ Y+ FEEALEEAR AGFLGDNILG+GF+FQLHAHHGYGAYICGE Sbjct: 121 MGITVGYNYIHGEIWNEYKIFEEALEEARRAGFLGDNILGSGFNFQLHAHHGYGAYICGE 180 Query: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFIFKVGPQAYAEMGKP 240 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPF+ +VGP+ Y +MGKP Sbjct: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFLLEVGPENYLKMGKP 240 Query: 241 NNGGTKIFSISGDVERPGNYEIPLGTPFSTLLELAGGMRGGKKIKAVIPGGSSAPVIRGD 300 NNGG+KIFS+SGDVERPGNYEIPLGTPF+TLLELAGGMRGGKKIKAVIPGGSSAPV+ GD Sbjct: 241 NNGGSKIFSVSGDVERPGNYEIPLGTPFATLLELAGGMRGGKKIKAVIPGGSSAPVVPGD 300 Query: 301 VMMDTTMDYDAIAKAGSMLGSGAVIVMDDTRCMVKSLLRLSYFYYEESCGQCTPCREGTG 360 +MM + MDYD+IAKAGSMLGSGAVIVMD+TRCMV+SLLRLSYFY+EESCGQCTPCREGTG Sbjct: 301 LMMASDMDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYFEESCGQCTPCREGTG 360 Query: 361 WMYRMVERIENGHGKMEDLDVLNSVADNIQGRTICALGDAAAMPVRAFVKNFREEFEYHI 420 W+YRMV RIE+G G+ EDLD+LN+VA+NI GRTICALGDAAAMPVR +K++ +EFEYH+ Sbjct: 361 WLYRMVNRIEHGEGRQEDLDLLNNVAENIMGRTICALGDAAAMPVRGMLKHYWKEFEYHV 420 Query: 421 EHKHCLVPAY 430 EHK C+VPAY Sbjct: 421 EHKQCMVPAY 430 >ref|ZP_00943355.1| NADH-quinone oxidoreductase chain F [Ralstonia solanacearum UW551] ref|YP_002259132.1| nadh dehydrogenaseI(chain f) protein [Ralstonia solanacearum IPO1609] gb|EAP74177.1| NADH-quinone oxidoreductase chain F [Ralstonia solanacearum UW551] emb|CAQ36045.1| nadh dehydrogenaseI(chain f) protein [Ralstonia solanacearum MolK2] emb|CAQ61061.1| nadh dehydrogenaseI(chain f) protein [Ralstonia solanacearum IPO1609] gb|AEG68677.1| nadh dehydrogenaseI(chain f) protein [Ralstonia solanacearum Po82] Length = 431 Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/431 (85%), Positives = 405/431 (93%) Query: 1 MTCLHDRHIKPLILADLNGENWHLEDYVKRGGYESLKRILNEKITPEQVIADLKASGLRG 60 MT LHDRHI+PLILA LNG+NWHLEDYVKRGGY+ LKRIL EKI+PEQVIAD+KASGLRG Sbjct: 1 MTSLHDRHIQPLILAGLNGDNWHLEDYVKRGGYQQLKRILTEKISPEQVIADVKASGLRG 60 Query: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYA 120 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGM IGGYA Sbjct: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMAIGGYA 120 Query: 121 MGITVGYNYIHGEIFSAYERFEEALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGE 180 MGITVGYNYIHGEI++ Y+ FE+ALEEARAAGFLGDNILG+GF+FQLHAHHGYGAYICGE Sbjct: 121 MGITVGYNYIHGEIWNEYKIFEQALEEARAAGFLGDNILGSGFNFQLHAHHGYGAYICGE 180 Query: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFIFKVGPQAYAEMGKP 240 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPF+ +GP Y +MGKP Sbjct: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFLLAIGPDNYLKMGKP 240 Query: 241 NNGGTKIFSISGDVERPGNYEIPLGTPFSTLLELAGGMRGGKKIKAVIPGGSSAPVIRGD 300 NNGG+KIFS+SGDVERPGNYEIPLGTPFS LLELAGGMRGGKK+KAVIPGGSSAPV+ D Sbjct: 241 NNGGSKIFSVSGDVERPGNYEIPLGTPFSKLLELAGGMRGGKKLKAVIPGGSSAPVVPAD 300 Query: 301 VMMDTTMDYDAIAKAGSMLGSGAVIVMDDTRCMVKSLLRLSYFYYEESCGQCTPCREGTG 360 +MM + MDYD+IAKAGSMLGSGAVIVMD+TRCMVKSLLRLSYFY+EESCGQCTPCREGTG Sbjct: 301 LMMASDMDYDSIAKAGSMLGSGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTG 360 Query: 361 WMYRMVERIENGHGKMEDLDVLNSVADNIQGRTICALGDAAAMPVRAFVKNFREEFEYHI 420 W+YR+V+RIE+G G+ EDLD+LN+VA+NI GRTICALGDAAAMPVR +K++ +EF YH+ Sbjct: 361 WLYRVVDRIEHGKGRQEDLDLLNNVAENIMGRTICALGDAAAMPVRGMLKHYWDEFAYHV 420 Query: 421 EHKHCLVPAYI 431 EHK C+VP YI Sbjct: 421 EHKQCMVPTYI 431 >ref|YP_003745249.1| NADH-quinone oxidoreductase subunit f [Ralstonia solanacearum CFBP2957] emb|CBJ42628.1| NADH-quinone oxidoreductase subunit F [Ralstonia solanacearum CFBP2957] Length = 431 Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/431 (85%), Positives = 404/431 (93%) Query: 1 MTCLHDRHIKPLILADLNGENWHLEDYVKRGGYESLKRILNEKITPEQVIADLKASGLRG 60 MT LHDRHI+PLILA LNG+NWHLEDYVKRGGY+ LKRIL EKI+PEQVIAD+KASGLRG Sbjct: 1 MTSLHDRHIQPLILAGLNGDNWHLEDYVKRGGYQQLKRILTEKISPEQVIADVKASGLRG 60 Query: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYA 120 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGM IGGYA Sbjct: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMAIGGYA 120 Query: 121 MGITVGYNYIHGEIFSAYERFEEALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGE 180 MGITVGYNYIHGEI++ Y+ FE+ALEEARAAGFLGDNILGTGF+FQLHAHHGYGAYICGE Sbjct: 121 MGITVGYNYIHGEIWNEYKIFEQALEEARAAGFLGDNILGTGFNFQLHAHHGYGAYICGE 180 Query: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFIFKVGPQAYAEMGKP 240 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPF+ +GP Y +MGKP Sbjct: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFLLAIGPDNYLKMGKP 240 Query: 241 NNGGTKIFSISGDVERPGNYEIPLGTPFSTLLELAGGMRGGKKIKAVIPGGSSAPVIRGD 300 NNGG+KIFS+SGDVERPGNYEIPLGTPFS LLELAGGMR GKK+KAVIPGGSSAPV+ D Sbjct: 241 NNGGSKIFSVSGDVERPGNYEIPLGTPFSKLLELAGGMRDGKKLKAVIPGGSSAPVVPAD 300 Query: 301 VMMDTTMDYDAIAKAGSMLGSGAVIVMDDTRCMVKSLLRLSYFYYEESCGQCTPCREGTG 360 +MM + MDYD+IAKAGSMLGSGAVIVMD+TRCMVKSLLRLSYFY+EESCGQCTPCREGTG Sbjct: 301 LMMASDMDYDSIAKAGSMLGSGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTG 360 Query: 361 WMYRMVERIENGHGKMEDLDVLNSVADNIQGRTICALGDAAAMPVRAFVKNFREEFEYHI 420 W+YR+V+RIE+G G+ EDLD+LN+VA+NI GRTICALGDAAAMPVR +K++ +EF YH+ Sbjct: 361 WLYRVVDRIEHGKGRQEDLDLLNNVAENIMGRTICALGDAAAMPVRGMLKHYWDEFAYHV 420 Query: 421 EHKHCLVPAYI 431 EHK C+VP YI Sbjct: 421 EHKQCMVPTYI 431 >ref|NP_520178.1| NADH dehydrogenase I chain F [Ralstonia solanacearum GMI1000] emb|CAD15764.1| probable nadh dehydrogenaseI(chain f) oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 431 Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/431 (84%), Positives = 404/431 (93%) Query: 1 MTCLHDRHIKPLILADLNGENWHLEDYVKRGGYESLKRILNEKITPEQVIADLKASGLRG 60 MT LHDRHI+PLILA LNG+NWHLEDYVKRGGY+ LKRIL EKI+PEQ+IAD+KASGLRG Sbjct: 1 MTSLHDRHIQPLILAGLNGDNWHLEDYVKRGGYQQLKRILTEKISPEQIIADVKASGLRG 60 Query: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYA 120 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGM IGGYA Sbjct: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMAIGGYA 120 Query: 121 MGITVGYNYIHGEIFSAYERFEEALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGE 180 MGITVGYNYIHGEI++ Y+ FE+ALEEARAAG LGDNILG+GF+FQLHAHHGYGAYICGE Sbjct: 121 MGITVGYNYIHGEIWNEYKLFEQALEEARAAGLLGDNILGSGFNFQLHAHHGYGAYICGE 180 Query: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFIFKVGPQAYAEMGKP 240 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPF+ +GP Y +MGKP Sbjct: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFLLSIGPDNYLKMGKP 240 Query: 241 NNGGTKIFSISGDVERPGNYEIPLGTPFSTLLELAGGMRGGKKIKAVIPGGSSAPVIRGD 300 NNGG+KIFS+SGDVERPGNYEIPLGTPFS LLELAGGMRGGKK+KAVIPGGSSAPV+ D Sbjct: 241 NNGGSKIFSVSGDVERPGNYEIPLGTPFSKLLELAGGMRGGKKLKAVIPGGSSAPVVPAD 300 Query: 301 VMMDTTMDYDAIAKAGSMLGSGAVIVMDDTRCMVKSLLRLSYFYYEESCGQCTPCREGTG 360 +MM + MDYD+IAKAGSMLGSGAVIVMD+TRCMVKSLLRLSYFY+EESCGQCTPCREGTG Sbjct: 301 LMMASDMDYDSIAKAGSMLGSGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTG 360 Query: 361 WMYRMVERIENGHGKMEDLDVLNSVADNIQGRTICALGDAAAMPVRAFVKNFREEFEYHI 420 W+YR+V+RIE+G G+ EDLD+LN+VA+NI GRTICALGDAAAMPVR +K++ +EF YH+ Sbjct: 361 WLYRVVDRIEHGKGRQEDLDLLNNVAENIMGRTICALGDAAAMPVRGMLKHYWDEFAYHV 420 Query: 421 EHKHCLVPAYI 431 EHK C+VP YI Sbjct: 421 EHKQCMVPTYI 431 >emb|CBJ37522.1| NADH-quinone oxidoreductase subunit F [Ralstonia solanacearum CMR15] Length = 431 Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/431 (84%), Positives = 404/431 (93%) Query: 1 MTCLHDRHIKPLILADLNGENWHLEDYVKRGGYESLKRILNEKITPEQVIADLKASGLRG 60 MT LHDRHI+PLILA LNG+NWHLEDYVKRGGY+ LKRIL EKI+PEQ+IAD+KASGLRG Sbjct: 1 MTSLHDRHIQPLILAGLNGDNWHLEDYVKRGGYQQLKRILTEKISPEQIIADVKASGLRG 60 Query: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYA 120 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGM IGGYA Sbjct: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMAIGGYA 120 Query: 121 MGITVGYNYIHGEIFSAYERFEEALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGE 180 MGITVGYNYIHGEI++ Y+ FE+ALEEARAAG LGDNILG+GF+FQLHAHHGYGAYICGE Sbjct: 121 MGITVGYNYIHGEIWNEYKIFEQALEEARAAGLLGDNILGSGFNFQLHAHHGYGAYICGE 180 Query: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFIFKVGPQAYAEMGKP 240 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPF+ +GP Y +MGKP Sbjct: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFLLSIGPDNYLKMGKP 240 Query: 241 NNGGTKIFSISGDVERPGNYEIPLGTPFSTLLELAGGMRGGKKIKAVIPGGSSAPVIRGD 300 NNGG+KIFS+SGDVERPGNYEIPLGTPFS LLELAGGMRGGKK+KAVIPGGSSAPV+ D Sbjct: 241 NNGGSKIFSVSGDVERPGNYEIPLGTPFSKLLELAGGMRGGKKLKAVIPGGSSAPVVPAD 300 Query: 301 VMMDTTMDYDAIAKAGSMLGSGAVIVMDDTRCMVKSLLRLSYFYYEESCGQCTPCREGTG 360 +MM + MDYD+IAKAGSMLGSGAVIVMD+TRCMVKSLLRLSYFY+EESCGQCTPCREGTG Sbjct: 301 LMMASDMDYDSIAKAGSMLGSGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTG 360 Query: 361 WMYRMVERIENGHGKMEDLDVLNSVADNIQGRTICALGDAAAMPVRAFVKNFREEFEYHI 420 W+YR+V+RIE+G G+ EDLD+LN+VA+NI GRTICALGDAAAMPVR +K++ +EF YH+ Sbjct: 361 WLYRVVDRIEHGKGRQEDLDLLNNVAENIMGRTICALGDAAAMPVRGMLKHYWDEFAYHV 420 Query: 421 EHKHCLVPAYI 431 EHK C+VP YI Sbjct: 421 EHKQCMVPTYI 431 >ref|YP_003604566.1| NADH-quinone oxidoreductase, F subunit [Burkholderia sp. CCGE1002] gb|ADG15055.1| NADH-quinone oxidoreductase, F subunit [Burkholderia sp. CCGE1002] Length = 441 Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/427 (85%), Positives = 400/427 (93%) Query: 1 MTCLHDRHIKPLILADLNGENWHLEDYVKRGGYESLKRILNEKITPEQVIADLKASGLRG 60 MT LHDRHIKPLILA LNG+NWHLEDYV RGGY L+RIL EKI PEQVIAD+KASGLRG Sbjct: 1 MTALHDRHIKPLILAGLNGDNWHLEDYVARGGYAQLRRILEEKIAPEQVIADVKASGLRG 60 Query: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYA 120 RGGAGFPTGLKWSFMPRQFPGQKYLVCN+DEGEPGTFKDRDI+R+NPH+LIEGM IG YA Sbjct: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNSDEGEPGTFKDRDILRFNPHSLIEGMAIGAYA 120 Query: 121 MGITVGYNYIHGEIFSAYERFEEALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGE 180 MGITVGYNYIHGEI+ Y+RFEEALEEAR AGFLGDNI+G+GFSFQLHAHHGYGAYICGE Sbjct: 121 MGITVGYNYIHGEIWEVYKRFEEALEEARRAGFLGDNIMGSGFSFQLHAHHGYGAYICGE 180 Query: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFIFKVGPQAYAEMGKP 240 ETALLES+EGKKGQPRFKPPFPASFG+YGKPTTINNTETFAAVPF+ +GPQ Y E+GKP Sbjct: 181 ETALLESIEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLAIGPQNYLEIGKP 240 Query: 241 NNGGTKIFSISGDVERPGNYEIPLGTPFSTLLELAGGMRGGKKIKAVIPGGSSAPVIRGD 300 NNGGTKIFS+SGDVERPGNYEIPLGTPF+TL+ELAGGMRGGKKIKAVIPGGSSAPVI GD Sbjct: 241 NNGGTKIFSVSGDVERPGNYEIPLGTPFATLMELAGGMRGGKKIKAVIPGGSSAPVIPGD 300 Query: 301 VMMDTTMDYDAIAKAGSMLGSGAVIVMDDTRCMVKSLLRLSYFYYEESCGQCTPCREGTG 360 +MM T MDYD+IAKAGSMLGSGAVIVMD+TRCMV+SLLRLSYFYYEESCGQCTPCREGTG Sbjct: 301 MMMQTDMDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCREGTG 360 Query: 361 WMYRMVERIENGHGKMEDLDVLNSVADNIQGRTICALGDAAAMPVRAFVKNFREEFEYHI 420 W+YR+V RIE+G G+ EDLD+LNSVA+NI GRTICALGDAAAMPVR +K++ +EFEYH+ Sbjct: 361 WLYRVVHRIEHGLGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEFEYHV 420 Query: 421 EHKHCLV 427 HKHCLV Sbjct: 421 AHKHCLV 427 >ref|ZP_02362301.1| NADH-quinone oxidoreductase, F subunit [Burkholderia oklahomensis C6786] Length = 436 Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/427 (85%), Positives = 397/427 (92%) Query: 1 MTCLHDRHIKPLILADLNGENWHLEDYVKRGGYESLKRILNEKITPEQVIADLKASGLRG 60 MT LHDRHIKPLILA L GENWHLEDYV RGGY L+RIL EKI PEQVIAD+KASGLRG Sbjct: 1 MTSLHDRHIKPLILAGLTGENWHLEDYVARGGYAQLRRILEEKIPPEQVIADVKASGLRG 60 Query: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYA 120 RGGAGFPTGLKWSFMPRQFPGQKYLVCN+DEGEPGTFKDRDI+R+NPHALIEGM IG YA Sbjct: 61 RGGAGFPTGLKWSFMPRQFPGQKYLVCNSDEGEPGTFKDRDILRWNPHALIEGMAIGAYA 120 Query: 121 MGITVGYNYIHGEIFSAYERFEEALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGE 180 MGITVGYNYIHGEIF Y RFE ALEEAR AGFLGDNI+G+GFSFQLHAHHGYGAYICGE Sbjct: 121 MGITVGYNYIHGEIFEVYRRFEAALEEARRAGFLGDNIMGSGFSFQLHAHHGYGAYICGE 180 Query: 181 ETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPFIFKVGPQAYAEMGKP 240 ETALLESLEGKKGQPRFKPPFPASFG+YGKPTTINNTETFAAVPF+ VGPQ Y EMGKP Sbjct: 181 ETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLAVGPQNYLEMGKP 240 Query: 241 NNGGTKIFSISGDVERPGNYEIPLGTPFSTLLELAGGMRGGKKIKAVIPGGSSAPVIRGD 300 NNGGTKIFS+SGDVERPGNYE+PLGTPF+TL+ELAGGMRGGKKIKAVIPGGSSAPVI GD Sbjct: 241 NNGGTKIFSVSGDVERPGNYEVPLGTPFATLMELAGGMRGGKKIKAVIPGGSSAPVIPGD 300 Query: 301 VMMDTTMDYDAIAKAGSMLGSGAVIVMDDTRCMVKSLLRLSYFYYEESCGQCTPCREGTG 360 +MM T +DYD+IAKAGSMLGSGAVIVMD+TRCMV+SLLRLSYFYYEESCGQCTPCREGTG Sbjct: 301 IMMQTDLDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCREGTG 360 Query: 361 WMYRMVERIENGHGKMEDLDVLNSVADNIQGRTICALGDAAAMPVRAFVKNFREEFEYHI 420 W+YR+V RIE+G G+ EDLD+LNSVA+NI GRTICALGDAAAMPVR +K++ +EF YH+ Sbjct: 361 WLYRVVNRIEHGEGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEFAYHV 420 Query: 421 EHKHCLV 427 EHKHC+V Sbjct: 421 EHKHCMV 427