BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0325.p (198 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775189.1| NADH dehydrogenase I subunit C [Herbaspirill... 407 e-112 ref|YP_004752248.1| NADH-ubiquinone oxidoreductase subunit C [Co... 355 3e-96 ref|YP_001353154.1| NADH dehydrogenase I chain C [Janthinobacter... 341 4e-92 ref|YP_001100104.1| putative NADH-quinone oxidoreductase chain C... 339 2e-91 ref|ZP_08276194.1| NADH-ubiquinone oxidoreductase chain C [Oxalo... 331 3e-89 emb|CBJ37519.1| NADH-quinone oxidoreductase subunit C [Ralstonia... 330 9e-89 ref|YP_001899778.1| NADH dehydrogenase subunit C [Ralstonia pick... 328 2e-88 ref|NP_520181.1| NADH dehydrogenase subunit C [Ralstonia solanac... 328 3e-88 ref|YP_003745246.1| NADH-quinone oxidoreductase subunit C [Ralst... 328 3e-88 ref|ZP_07676587.1| NADH dehydrogenase (ubiquinone), C subunit [R... 327 6e-88 >ref|YP_003775189.1| NADH dehydrogenase I subunit C [Herbaspirillum seropedicae SmR1] gb|ADJ63281.1| NADH dehydrogenase I (Chain C) oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 198 Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust. Identities = 198/198 (100%), Positives = 198/198 (100%) Query: 1 MTTKLETLEAALRNALGGYLQNLTVALGEVTVVVKAADYLSAMRVLRDHADTRFEQLIDL 60 MTTKLETLEAALRNALGGYLQNLTVALGEVTVVVKAADYLSAMRVLRDHADTRFEQLIDL Sbjct: 1 MTTKLETLEAALRNALGGYLQNLTVALGEVTVVVKAADYLSAMRVLRDHADTRFEQLIDL 60 Query: 61 CGVDYSTYGDGAWEGPRFAVVSHLMSIAHNWRVRVRVFAPDDDLPIVASVDPIWNSAGWY 120 CGVDYSTYGDGAWEGPRFAVVSHLMSIAHNWRVRVRVFAPDDDLPIVASVDPIWNSAGWY Sbjct: 61 CGVDYSTYGDGAWEGPRFAVVSHLMSIAHNWRVRVRVFAPDDDLPIVASVDPIWNSAGWY 120 Query: 121 EREAFDFYGILFDGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 EREAFDFYGILFDGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI Sbjct: 121 EREAFDFYGILFDGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 Query: 181 EPREITPRIIREENYGIK 198 EPREITPRIIREENYGIK Sbjct: 181 EPREITPRIIREENYGIK 198 >ref|YP_004752248.1| NADH-ubiquinone oxidoreductase subunit C [Collimonas fungivorans Ter331] gb|AEK61425.1| NADH-ubiquinone oxidoreductase chain C [Collimonas fungivorans Ter331] Length = 198 Score = 355 bits (910), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 166/198 (83%), Positives = 186/198 (93%) Query: 1 MTTKLETLEAALRNALGGYLQNLTVALGEVTVVVKAADYLSAMRVLRDHADTRFEQLIDL 60 MTTKLETLEAA+RNALG LQ+L VA GE+T+VVKA++YLSAMRVLRDHADTRFE+LIDL Sbjct: 1 MTTKLETLEAAVRNALGDDLQSLAVAFGEITIVVKASNYLSAMRVLRDHADTRFEELIDL 60 Query: 61 CGVDYSTYGDGAWEGPRFAVVSHLMSIAHNWRVRVRVFAPDDDLPIVASVDPIWNSAGWY 120 CGVDYSTYGDGAW+G RFA VSHL+SI HNWR+RVRVFAPDD++P++AS+ IW SA WY Sbjct: 61 CGVDYSTYGDGAWDGARFAAVSHLLSIEHNWRLRVRVFAPDDEMPMLASLTDIWASANWY 120 Query: 121 EREAFDFYGILFDGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 EREAFDF+GILF+GH DLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI Sbjct: 121 EREAFDFFGILFEGHNDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 Query: 181 EPREITPRIIREENYGIK 198 +PREITPR+IREE+YGIK Sbjct: 181 DPREITPRVIREEHYGIK 198 >ref|YP_001353154.1| NADH dehydrogenase I chain C [Janthinobacterium sp. Marseille] sp|A6SY07.1|NUOC_JANMA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName: Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1 subunit C gb|ABR89190.1| NADH dehydrogenase I chain C [Janthinobacterium sp. Marseille] Length = 198 Score = 341 bits (874), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 162/198 (81%), Positives = 177/198 (89%) Query: 1 MTTKLETLEAALRNALGGYLQNLTVALGEVTVVVKAADYLSAMRVLRDHADTRFEQLIDL 60 MT KLE LEAALRNALG LQ+LT ALGEVT+VVK+ DY SAMRVLRDHAD RFE++IDL Sbjct: 1 MTIKLELLEAALRNALGDQLQSLTQALGEVTIVVKSHDYASAMRVLRDHADLRFEEMIDL 60 Query: 61 CGVDYSTYGDGAWEGPRFAVVSHLMSIAHNWRVRVRVFAPDDDLPIVASVDPIWNSAGWY 120 CGVDYSTYGDG WEGPRFAVVSHL+SI HNWRVRVRVFA DD++P+VAS+ IW +A WY Sbjct: 61 CGVDYSTYGDGLWEGPRFAVVSHLLSIKHNWRVRVRVFAADDEMPVVASMIDIWATANWY 120 Query: 121 EREAFDFYGILFDGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 EREAFDF+GILF+GH DLRRILTDYGFIGHPFRKDFPVSGYVEMRYD EQKRVIYQPVTI Sbjct: 121 EREAFDFFGILFEGHNDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEQKRVIYQPVTI 180 Query: 181 EPREITPRIIREENYGIK 198 +PRE PR+IREE YG K Sbjct: 181 DPRENVPRVIREEQYGAK 198 >ref|YP_001100104.1| putative NADH-quinone oxidoreductase chain C [Herminiimonas arsenicoxydans] sp|A4G642.1|NUOC_HERAR RecName: Full=NADH-quinone oxidoreductase subunit C; AltName: Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1 subunit C emb|CAL61979.1| NADH-quinone oxidoreductase chain C (NADH dehydrogenase I, chain C) (NDH-1, chain C) [Herminiimonas arsenicoxydans] Length = 198 Score = 339 bits (869), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 159/198 (80%), Positives = 178/198 (89%) Query: 1 MTTKLETLEAALRNALGGYLQNLTVALGEVTVVVKAADYLSAMRVLRDHADTRFEQLIDL 60 MT KLE LE+ALRNALG LQ+LT+ALGE+T+VV + DY SAMRVLRDHAD RFE+LIDL Sbjct: 1 MTIKLELLESALRNALGDQLQSLTLALGEITIVVNSRDYASAMRVLRDHADLRFEELIDL 60 Query: 61 CGVDYSTYGDGAWEGPRFAVVSHLMSIAHNWRVRVRVFAPDDDLPIVASVDPIWNSAGWY 120 CGVDYSTYGDGAW+G RFAVVSHL+SI HNWRVRVRVFA DD++P+VAS+ IW +A WY Sbjct: 61 CGVDYSTYGDGAWDGQRFAVVSHLLSITHNWRVRVRVFASDDEMPVVASMTEIWPAANWY 120 Query: 121 EREAFDFYGILFDGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 EREAFDF+GILF+GH DLRRILTDYGFIGHPFRKDFPVSGYVEMRYD EQKRVIYQPVTI Sbjct: 121 EREAFDFFGILFEGHNDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEQKRVIYQPVTI 180 Query: 181 EPREITPRIIREENYGIK 198 +PRE PR+IREE YG+K Sbjct: 181 DPRENVPRVIREEQYGMK 198 >ref|ZP_08276194.1| NADH-ubiquinone oxidoreductase chain C [Oxalobacteraceae bacterium IMCC9480] gb|EGF30333.1| NADH-ubiquinone oxidoreductase chain C [Oxalobacteraceae bacterium IMCC9480] Length = 198 Score = 331 bits (849), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 155/198 (78%), Positives = 179/198 (90%) Query: 1 MTTKLETLEAALRNALGGYLQNLTVALGEVTVVVKAADYLSAMRVLRDHADTRFEQLIDL 60 MTTKL+ L+AAL +ALG ++ +LT ALGE+T+V+K + YLSAMRVLRDH DTRFEQL+DL Sbjct: 1 MTTKLDNLQAALHSALGDHIVSLTNALGEITLVIKDSHYLSAMRVLRDHPDTRFEQLLDL 60 Query: 61 CGVDYSTYGDGAWEGPRFAVVSHLMSIAHNWRVRVRVFAPDDDLPIVASVDPIWNSAGWY 120 GVD+STYGDGAW+G RFAVVSHL+S+ HNWRVRVRVFA DD++P+VAS+ IW+SA WY Sbjct: 61 AGVDFSTYGDGAWDGRRFAVVSHLLSLTHNWRVRVRVFASDDEVPVVASLIDIWSSANWY 120 Query: 121 EREAFDFYGILFDGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 EREAFDF+GILF+GH DLRRILTDYGFIGHPFRKDFPVSGYVEMRYD EQKRVIYQPVTI Sbjct: 121 EREAFDFFGILFEGHDDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEQKRVIYQPVTI 180 Query: 181 EPREITPRIIREENYGIK 198 EPRE+ PR+IREE YGIK Sbjct: 181 EPREVVPRVIREEQYGIK 198 >emb|CBJ37519.1| NADH-quinone oxidoreductase subunit C [Ralstonia solanacearum CMR15] Length = 200 Score = 330 bits (845), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 154/196 (78%), Positives = 173/196 (88%) Query: 1 MTTKLETLEAALRNALGGYLQNLTVALGEVTVVVKAADYLSAMRVLRDHADTRFEQLIDL 60 MT KL TL++AL ALG +Q+LT A+GE+T+VVKAADYL MR LRD A +FEQLIDL Sbjct: 1 MTDKLATLQSALEKALGNRIQSLTEAVGELTLVVKAADYLETMRTLRDDAALKFEQLIDL 60 Query: 61 CGVDYSTYGDGAWEGPRFAVVSHLMSIAHNWRVRVRVFAPDDDLPIVASVDPIWNSAGWY 120 CGVDYSTYGDGAW GPRFA VSHL+S+ HNWRVRVRVFAPDDDLP+VASV IWN+A W+ Sbjct: 61 CGVDYSTYGDGAWNGPRFAAVSHLLSVTHNWRVRVRVFAPDDDLPVVASVVDIWNAADWF 120 Query: 121 EREAFDFYGILFDGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 EREAFD YG++F+GHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYD Q+RVIYQPVTI Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPVQRRVIYQPVTI 180 Query: 181 EPREITPRIIREENYG 196 EPREITPR+IRE+ YG Sbjct: 181 EPREITPRVIREDQYG 196 >ref|YP_001899778.1| NADH dehydrogenase subunit C [Ralstonia pickettii 12J] sp|B2U7Q9.1|NUOC_RALPJ RecName: Full=NADH-quinone oxidoreductase subunit C; AltName: Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1 subunit C gb|ACD27346.1| NADH (or F420H2) dehydrogenase, subunit C [Ralstonia pickettii 12J] Length = 200 Score = 328 bits (841), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 152/196 (77%), Positives = 173/196 (88%) Query: 1 MTTKLETLEAALRNALGGYLQNLTVALGEVTVVVKAADYLSAMRVLRDHADTRFEQLIDL 60 MT KL TL+AAL ALG +Q+LT ++GE+T+VVKAADYL AMR LRD A +FEQL+DL Sbjct: 1 MTDKLATLKAALEKALGNRVQSLTESVGELTLVVKAADYLDAMRTLRDDASLKFEQLMDL 60 Query: 61 CGVDYSTYGDGAWEGPRFAVVSHLMSIAHNWRVRVRVFAPDDDLPIVASVDPIWNSAGWY 120 CGVDY+ YGDGAW GPRFA VSHL+SI HNWRVRVRVFAPDDDLP+V+SV IWNSA W+ Sbjct: 61 CGVDYADYGDGAWNGPRFAAVSHLLSITHNWRVRVRVFAPDDDLPVVSSVTTIWNSADWF 120 Query: 121 EREAFDFYGILFDGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 EREAFD YG++F+GHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYD Q+RV+YQPVTI Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPVQRRVVYQPVTI 180 Query: 181 EPREITPRIIREENYG 196 EPREITPR+IRE+ YG Sbjct: 181 EPREITPRVIREDQYG 196 >ref|NP_520181.1| NADH dehydrogenase subunit C [Ralstonia solanacearum GMI1000] sp|Q8XXQ3.1|NUOC_RALSO RecName: Full=NADH-quinone oxidoreductase subunit C; AltName: Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1 subunit C emb|CAD15767.1| probable nadh dehydrogenaseI(chain c) oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 200 Score = 328 bits (841), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 152/196 (77%), Positives = 172/196 (87%) Query: 1 MTTKLETLEAALRNALGGYLQNLTVALGEVTVVVKAADYLSAMRVLRDHADTRFEQLIDL 60 MT KL TL++AL ALG +Q+LT A+GE+T+VVKAADYL MR LRD A +FEQLIDL Sbjct: 1 MTDKLATLQSALEKALGNRIQSLTEAVGEITLVVKAADYLETMRTLRDDATLKFEQLIDL 60 Query: 61 CGVDYSTYGDGAWEGPRFAVVSHLMSIAHNWRVRVRVFAPDDDLPIVASVDPIWNSAGWY 120 CGVDYS YGDGAW GPRFA VSHL+S+ HNWRVRVRVFAPDDDLP+VASV +WN+A W+ Sbjct: 61 CGVDYSAYGDGAWNGPRFAAVSHLLSVTHNWRVRVRVFAPDDDLPVVASVVDVWNAADWF 120 Query: 121 EREAFDFYGILFDGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 EREAFD YG++F+GHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYD Q+RVIYQPVTI Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPVQRRVIYQPVTI 180 Query: 181 EPREITPRIIREENYG 196 EPREITPR+IRE+ YG Sbjct: 181 EPREITPRVIREDQYG 196 >ref|YP_003745246.1| NADH-quinone oxidoreductase subunit C [Ralstonia solanacearum CFBP2957] emb|CBJ42625.1| NADH-quinone oxidoreductase subunit C [Ralstonia solanacearum CFBP2957] Length = 200 Score = 328 bits (840), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 154/196 (78%), Positives = 173/196 (88%) Query: 1 MTTKLETLEAALRNALGGYLQNLTVALGEVTVVVKAADYLSAMRVLRDHADTRFEQLIDL 60 MT KL TL+AAL ALG +Q+LT A+GE+T+VVKAADYL AMR LRD A +FEQLIDL Sbjct: 1 MTDKLATLKAALEKALGDRIQSLTEAVGELTLVVKAADYLDAMRTLRDDAALKFEQLIDL 60 Query: 61 CGVDYSTYGDGAWEGPRFAVVSHLMSIAHNWRVRVRVFAPDDDLPIVASVDPIWNSAGWY 120 CGVDYS YGDGAW GPRFA VSHL+SI HNWR+RVRVFAPDDDLP+VASV +WN+A W+ Sbjct: 61 CGVDYSAYGDGAWNGPRFAAVSHLLSITHNWRLRVRVFAPDDDLPVVASVVDVWNAADWF 120 Query: 121 EREAFDFYGILFDGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 EREAFD YG++F+GHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYD Q+RVIYQPVTI Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPVQRRVIYQPVTI 180 Query: 181 EPREITPRIIREENYG 196 EPREITPR+IRE+ YG Sbjct: 181 EPREITPRVIREDQYG 196 >ref|ZP_07676587.1| NADH dehydrogenase (ubiquinone), C subunit [Ralstonia sp. 5_7_47FAA] gb|EFP65159.1| NADH dehydrogenase (ubiquinone), C subunit [Ralstonia sp. 5_7_47FAA] Length = 200 Score = 327 bits (838), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 153/196 (78%), Positives = 171/196 (87%) Query: 1 MTTKLETLEAALRNALGGYLQNLTVALGEVTVVVKAADYLSAMRVLRDHADTRFEQLIDL 60 MT KL TL+AAL ALG +Q+LT ++GE+T+VVKAADY MR LRD A +FEQLIDL Sbjct: 1 MTEKLATLKAALEKALGDRVQSLTESIGELTLVVKAADYYDVMRTLRDDASLKFEQLIDL 60 Query: 61 CGVDYSTYGDGAWEGPRFAVVSHLMSIAHNWRVRVRVFAPDDDLPIVASVDPIWNSAGWY 120 CGVDY+ YGDGAW GPRFA VSHL+SI HNWRVRVRVFAPDDDLP+VASV IWNSA WY Sbjct: 61 CGVDYADYGDGAWNGPRFAAVSHLLSITHNWRVRVRVFAPDDDLPVVASVTTIWNSADWY 120 Query: 121 EREAFDFYGILFDGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 EREAFD YG++F+GHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYD Q+RV+YQPVTI Sbjct: 121 EREAFDLYGLVFEGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPVQRRVVYQPVTI 180 Query: 181 EPREITPRIIREENYG 196 EPREITPR+IRE+ YG Sbjct: 181 EPREITPRVIREDQYG 196