BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0324.p (128 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775188.1| NADH dehydrogenase I subunit B [Herbaspirill... 268 1e-70 ref|ZP_03697929.1| NADH-quinone oxidoreductase, B subunit [Lutie... 261 2e-68 ref|NP_900612.1| NADH dehydrogenase subunit B [Chromobacterium v... 261 2e-68 ref|YP_004752247.1| NADH-ubiquinone oxidoreductase subunit B [Co... 261 3e-68 ref|YP_295185.1| NADH dehydrogenase subunit B [Ralstonia eutroph... 259 8e-68 ref|YP_001353153.1| NADH dehydrogenase I chain B [Janthinobacter... 259 1e-67 ref|YP_932901.1| NADH dehydrogenase subunit B [Azoarcus sp. BH72... 258 2e-67 ref|YP_002945392.1| NADH dehydrogenase subunit B [Variovorax par... 258 2e-67 ref|YP_583083.1| NADH dehydrogenase subunit B [Cupriavidus metal... 258 2e-67 ref|YP_004156307.1| NADH-quinone oxidoreductase subunit B [Vario... 258 2e-67 >ref|YP_003775188.1| NADH dehydrogenase I subunit B [Herbaspirillum seropedicae SmR1] gb|ADJ63280.1| NADH dehydrogenase I (Chain B) oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 158 Score = 268 bits (686), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 128/128 (100%), Positives = 128/128 (100%) Query: 1 MTFGLACCAVEMMHVGASRYDLDRFGAVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM 60 MTFGLACCAVEMMHVGASRYDLDRFGAVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM Sbjct: 31 MTFGLACCAVEMMHVGASRYDLDRFGAVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM 90 Query: 61 PEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKI 120 PEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKI Sbjct: 91 PEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKI 150 Query: 121 KRTNTIAR 128 KRTNTIAR Sbjct: 151 KRTNTIAR 158 >ref|ZP_03697929.1| NADH-quinone oxidoreductase, B subunit [Lutiella nitroferrum 2002] ref|YP_004845864.1| NADH dehydrogenase (ubiquinone) subunit B [Pseudogulbenkiania sp. NH8B] gb|EEG09491.1| NADH-quinone oxidoreductase, B subunit [Lutiella nitroferrum 2002] dbj|BAK75450.1| NADH dehydrogenase (ubiquinone), B subunit [Pseudogulbenkiania sp. NH8B] Length = 158 Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 123/128 (96%), Positives = 125/128 (97%) Query: 1 MTFGLACCAVEMMHVGASRYDLDRFGAVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM 60 MTFGLACCAVEMMH GA+RYDLDRFG VFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM Sbjct: 31 MTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM 90 Query: 61 PEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKI 120 EPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYG+IQLQNKI Sbjct: 91 AEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKI 150 Query: 121 KRTNTIAR 128 KRTNTIAR Sbjct: 151 KRTNTIAR 158 >ref|NP_900612.1| NADH dehydrogenase subunit B [Chromobacterium violaceum ATCC 12472] sp|Q7NZI0.1|NUOB1_CHRVO RecName: Full=NADH-quinone oxidoreductase subunit B 1; AltName: Full=NADH dehydrogenase I subunit B 1; AltName: Full=NDH-1 subunit B 1 gb|AAQ58616.1| NADH-ubiquinone oxidoreductase, chain B [Chromobacterium violaceum ATCC 12472] Length = 158 Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 123/128 (96%), Positives = 125/128 (97%) Query: 1 MTFGLACCAVEMMHVGASRYDLDRFGAVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM 60 MTFGLACCAVEMMH GA+RYDLDRFG VFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM Sbjct: 31 MTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM 90 Query: 61 PEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKI 120 EPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYG+IQLQNKI Sbjct: 91 AEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKI 150 Query: 121 KRTNTIAR 128 KRTNTIAR Sbjct: 151 KRTNTIAR 158 >ref|YP_004752247.1| NADH-ubiquinone oxidoreductase subunit B [Collimonas fungivorans Ter331] gb|AEK61424.1| NADH-ubiquinone oxidoreductase chain B [Collimonas fungivorans Ter331] Length = 158 Score = 261 bits (666), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 120/128 (93%), Positives = 126/128 (98%) Query: 1 MTFGLACCAVEMMHVGASRYDLDRFGAVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM 60 MTFGLACCAVEMMH GASRYD+DRFG +FRPSPRQSD+MIVAGTLCNKMAPALRKVYDQM Sbjct: 31 MTFGLACCAVEMMHAGASRYDMDRFGVIFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQM 90 Query: 61 PEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKI 120 PEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVD+YVPGCPPTAEALLYG+IQLQNKI Sbjct: 91 PEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIIQLQNKI 150 Query: 121 KRTNTIAR 128 +RTNTIAR Sbjct: 151 RRTNTIAR 158 >ref|YP_295185.1| NADH dehydrogenase subunit B [Ralstonia eutropha JMP134] sp|Q473U2.1|NUOB_RALEJ RecName: Full=NADH-quinone oxidoreductase subunit B; AltName: Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit B gb|AAZ60341.1| NADH dehydrogenase subunit B [Ralstonia eutropha JMP134] Length = 160 Score = 259 bits (662), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 121/128 (94%), Positives = 125/128 (97%) Query: 1 MTFGLACCAVEMMHVGASRYDLDRFGAVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM 60 MTFGLACCAVEMMH GA+RYDLDRFG VFRPSPRQSD+MIVAGTLCNKMAPALRKVYDQM Sbjct: 31 MTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQM 90 Query: 61 PEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKI 120 EPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVD+YVPGCPPTAEAL+YGVIQLQNKI Sbjct: 91 AEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNKI 150 Query: 121 KRTNTIAR 128 KRTNTIAR Sbjct: 151 KRTNTIAR 158 >ref|YP_001353153.1| NADH dehydrogenase I chain B [Janthinobacterium sp. Marseille] sp|A6SY06.1|NUOB_JANMA RecName: Full=NADH-quinone oxidoreductase subunit B; AltName: Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit B gb|ABR88665.1| NADH dehydrogenase I chain B [Janthinobacterium sp. Marseille] Length = 158 Score = 259 bits (661), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 121/128 (94%), Positives = 125/128 (97%) Query: 1 MTFGLACCAVEMMHVGASRYDLDRFGAVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM 60 MTFGLACCAVEMMH GASRYDLDRFG VFRPSPRQSD+MIVAGTLCNKMAPALRKVYDQM Sbjct: 31 MTFGLACCAVEMMHAGASRYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQM 90 Query: 61 PEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKI 120 EPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYG++QLQNKI Sbjct: 91 AEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIMQLQNKI 150 Query: 121 KRTNTIAR 128 +RTNTIAR Sbjct: 151 RRTNTIAR 158 >ref|YP_932901.1| NADH dehydrogenase subunit B [Azoarcus sp. BH72] sp|A1K5A9.1|NUOB1_AZOSB RecName: Full=NADH-quinone oxidoreductase subunit B 1; AltName: Full=NADH dehydrogenase I subunit B 1; AltName: Full=NDH-1 subunit B 1 emb|CAL94014.1| putative NADH-ubiquinone oxidoreductase chain B [Azoarcus sp. BH72] Length = 158 Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 122/128 (95%), Positives = 124/128 (96%) Query: 1 MTFGLACCAVEMMHVGASRYDLDRFGAVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM 60 MTFGLACCAVEM+H G SRYDLDRFG VFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM Sbjct: 31 MTFGLACCAVEMIHAGCSRYDLDRFGVVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM 90 Query: 61 PEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKI 120 EPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYG+IQLQNKI Sbjct: 91 AEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKI 150 Query: 121 KRTNTIAR 128 KRTNTIAR Sbjct: 151 KRTNTIAR 158 >ref|YP_002945392.1| NADH dehydrogenase subunit B [Variovorax paradoxus S110] sp|C5CT19.1|NUOB_VARPS RecName: Full=NADH-quinone oxidoreductase subunit B; AltName: Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit B gb|ACS20126.1| NADH-quinone oxidoreductase, B subunit [Variovorax paradoxus S110] Length = 159 Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 120/128 (93%), Positives = 125/128 (97%) Query: 1 MTFGLACCAVEMMHVGASRYDLDRFGAVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM 60 MTFGLACCAVEMMH GA+RYD+DRFG +FRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM Sbjct: 31 MTFGLACCAVEMMHAGAARYDIDRFGMLFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM 90 Query: 61 PEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKI 120 PEPRWV+SMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQ KI Sbjct: 91 PEPRWVLSMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQQKI 150 Query: 121 KRTNTIAR 128 +RTNTIAR Sbjct: 151 RRTNTIAR 158 >ref|YP_583083.1| NADH dehydrogenase subunit B [Cupriavidus metallidurans CH34] ref|YP_725560.1| NADH dehydrogenase subunit B [Ralstonia eutropha H16] ref|YP_002005067.1| NADH dehydrogenase subunit b [Cupriavidus taiwanensis LMG 19424] ref|YP_004684831.1| NADH-quinone oxidoreductase subunit B [Cupriavidus necator N-1] sp|Q0KCS9.1|NUOB_RALEH RecName: Full=NADH-quinone oxidoreductase subunit B; AltName: Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit B sp|B3R3W8.1|NUOB_CUPTR RecName: Full=NADH-quinone oxidoreductase subunit B; AltName: Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit B sp|Q1LPW2.1|NUOB_RALME RecName: Full=NADH-quinone oxidoreductase subunit B; AltName: Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit B gb|ABF07814.1| NADH dehydrogenase chain B [Cupriavidus metallidurans CH34] emb|CAJ92192.1| NADH dehydrogenase chain B [Ralstonia eutropha H16] emb|CAQ69000.1| NADH:ubiquinone oxidoreductase complex I, chain B [Cupriavidus taiwanensis LMG 19424] gb|AEI76350.1| NADH-quinone oxidoreductase subunit B [Cupriavidus necator N-1] Length = 160 Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 119/128 (92%), Positives = 125/128 (97%) Query: 1 MTFGLACCAVEMMHVGASRYDLDRFGAVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM 60 MTFGLACCAVEMMH GA+RYD+DRFG +FRPSPRQSD+MIVAGTLCNKMAPALRKVYDQM Sbjct: 31 MTFGLACCAVEMMHAGAARYDMDRFGVIFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQM 90 Query: 61 PEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKI 120 EPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVD+YVPGCPPTAEAL+YGVIQLQNKI Sbjct: 91 AEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNKI 150 Query: 121 KRTNTIAR 128 KRTNTIAR Sbjct: 151 KRTNTIAR 158 >ref|YP_004156307.1| NADH-quinone oxidoreductase subunit B [Variovorax paradoxus EPS] gb|ADU38196.1| NADH-quinone oxidoreductase, B subunit [Variovorax paradoxus EPS] Length = 159 Score = 258 bits (658), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 120/128 (93%), Positives = 125/128 (97%) Query: 1 MTFGLACCAVEMMHVGASRYDLDRFGAVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM 60 MTFGLACCAVEMMH GA+RYD+DRFG +FRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM Sbjct: 31 MTFGLACCAVEMMHAGAARYDIDRFGMLFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQM 90 Query: 61 PEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKI 120 PEPRWV+SMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQ KI Sbjct: 91 PEPRWVLSMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQQKI 150 Query: 121 KRTNTIAR 128 +RTNTIAR Sbjct: 151 RRTNTIAR 158