BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0312.p (430 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775177.1| NADH dehydrogenase [Herbaspirillum seropedic... 877 0.0 ref|YP_004618297.1| NADH dehydrogenase [Ramlibacter tataouinensi... 545 e-153 ref|YP_001021407.1| NADH dehydrogenase [Methylibium petroleiphil... 535 e-150 ref|YP_004156502.1| faD-dependent pyridine nucleotide-disulfide ... 500 e-139 ref|YP_453077.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryz... 494 e-137 ref|NP_639114.1| NADH dehydrogenase [Xanthomonas campestris pv. ... 492 e-137 gb|AEL05452.1| NADH dehydrogenase [Xanthomonas campestris pv. ra... 492 e-137 ref|YP_202933.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryz... 492 e-137 ref|ZP_06492467.1| NADH dehydrogenase [Xanthomonas campestris pv... 492 e-137 ref|YP_001905356.1| Putative NADH dehydrogenase [Xanthomonas cam... 491 e-137 >ref|YP_003775177.1| NADH dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ63269.1| NADH dehydrogenase, FAD-containing subunit, protein; cytochrome c reductase protein [Herbaspirillum seropedicae SmR1] Length = 430 Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/430 (99%), Positives = 429/430 (99%) Query: 1 MPHVVIIGCGFGGLAAARELANAEVRITMIDRSNHHLFQPLLYQVATAGLSAPAISAPIR 60 MPHVVIIGCGFGGLAAARELANAEVRITMIDRSNHHLFQPLLYQVATAGLSAPAISAPIR Sbjct: 1 MPHVVIIGCGFGGLAAARELANAEVRITMIDRSNHHLFQPLLYQVATAGLSAPAISAPIR 60 Query: 61 AILAHQRNLTTLMAAVTGIDTAAKTVQLEDGSTMAYDHLIVAAGSTHSYFGRDEWSSLAP 120 AILAHQRNLTTLMAAVTGIDTAAKTVQLEDGSTMAYDHLIVAAGSTHSYFGRDEWSSLAP Sbjct: 61 AILAHQRNLTTLMAAVTGIDTAAKTVQLEDGSTMAYDHLIVAAGSTHSYFGRDEWSSLAP 120 Query: 121 GLKTLEDAFEIRKRILMAFERAERESDARRRQEWLTFTVIGGGATGVEMAGTLVEIARHT 180 GLKTLEDAFEIRKRILMAFERAERESDARRRQEWLTFTVIGGGATGVEMAGTLVEIARHT Sbjct: 121 GLKTLEDAFEIRKRILMAFERAERESDARRRQEWLTFTVIGGGATGVEMAGTLVEIARHT 180 Query: 181 LAGEFRNIDPHSARVVLIEGSDRILGAYPPDLSDKAREQLQKLGVDVRTGSRVVHIDETC 240 LAGEFRNIDPHSARVVLIEGSDRILGAYPPDLSDKAREQLQKLGVDVRTGSRVVHIDETC Sbjct: 181 LAGEFRNIDPHSARVVLIEGSDRILGAYPPDLSDKAREQLQKLGVDVRTGSRVVHIDETC 240 Query: 241 VRYTNFDGEQTLSTRTVIWSAGVAASPLGRALGVELDRAGRVPVSPELNIAGHDDVYVIG 300 VRYTNFDGEQTLSTRTVIWSAGVAASPLGRALGVELDRAGRVPVSPELNIAGHDDVYVIG Sbjct: 241 VRYTNFDGEQTLSTRTVIWSAGVAASPLGRALGVELDRAGRVPVSPELNIAGHDDVYVIG 300 Query: 301 DLAAAQSEGKPVPGVSPAAKQMGRVAARNIKHRIAGQTPETFVYQDYGSLATIGRKAAIA 360 DLAAAQSEGKPVPGVSPAAKQMGRVAARNIKHRIAGQTPETFVYQDYGSLATIGRKAAIA Sbjct: 301 DLAAAQSEGKPVPGVSPAAKQMGRVAARNIKHRIAGQTPETFVYQDYGSLATIGRKAAIA 360 Query: 361 MVGKLKFSGYPAWLFWLFVHVYFLIGFRNRIMVMADWAWAYFTFKRSARVISATMSTQAE 420 MVGKLKFSGYPAWLFWLFVHVYFLIGFRNRIMVMADWAWAYFTFKRSARVISATM TQAE Sbjct: 361 MVGKLKFSGYPAWLFWLFVHVYFLIGFRNRIMVMADWAWAYFTFKRSARVISATMPTQAE 420 Query: 421 QSPLRKEAAE 430 QSPLRKEAAE Sbjct: 421 QSPLRKEAAE 430 >ref|YP_004618297.1| NADH dehydrogenase [Ramlibacter tataouinensis TTB310] gb|AEG92278.1| NADH dehydrogenase-like protein [Ramlibacter tataouinensis TTB310] Length = 450 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 273/434 (62%), Positives = 334/434 (76%), Gaps = 16/434 (3%) Query: 2 PHVVIIGCGFGGLAAARELANAEVRITMIDRSNHHLFQPLLYQVATAGLSAPAISAPIRA 61 P V+IIGCGFGGL AA+ L A V +T++DR+NHHLFQPLLYQVATAGLSAPAI+AP+R Sbjct: 14 PRVLIIGCGFGGLEAAKALRRAPVDVTVVDRTNHHLFQPLLYQVATAGLSAPAIAAPVRH 73 Query: 62 ILAHQRNLTTLMAAVTGIDTAAKTVQLEDGSTMAYDHLIVAAGSTHSYFGRDEWSSLAPG 121 +L Q N+TTL+ VT ID A + V+L G + YDHL+VAAG+THSYFGRD+W+ APG Sbjct: 74 VLRDQANVTTLLGEVTAIDPALRIVRLGSGEALPYDHLVVAAGATHSYFGRDDWARFAPG 133 Query: 122 LKTLEDAFEIRKRILMAFERAERESDARRRQEWLTFTVIGGGATGVEMAGTLVEIARHTL 181 LKTL+DAFEIR+RIL+A+E AE+ESD RRR EWLTF VIGGG TGVEMAGT+ EIARHTL Sbjct: 134 LKTLDDAFEIRRRILLAYEAAEKESDPRRRAEWLTFVVIGGGPTGVEMAGTMAEIARHTL 193 Query: 182 AGEFRNIDPHSARVVLIEGSDRILGAYPPDLSDKAREQLQKLGVDVRTGSRVVHIDETCV 241 GEFR IDP SARV+LIEG R+L P DLS +A+EQLQ+LGV+VRTGSRVV ID+T + Sbjct: 194 RGEFRRIDPASARVLLIEGGSRVLQTMPEDLSQRAQEQLQRLGVEVRTGSRVVGIDDTGL 253 Query: 242 RY---TNFDGEQTLSTRTVIWSAGVAASPLGRAL----GVELDRAGRVPVSPELNIAGHD 294 + D +S+R ++W+AGVAASPLGR L G+ DRAGR+PV P+L++ GH Sbjct: 254 QVQPGAGPDAAYRISSRCIVWAAGVAASPLGRQLAEATGIATDRAGRMPVEPDLSLRGHP 313 Query: 295 DVYVIGDLAAAQSE-----GKPVPGVSPAAKQMGRVAARNIKHRIAGQTPETFVYQDYGS 349 D+ V+GDLAAA S +PVPGVSPAAKQMGR AA NI R+ G+ F Y+DYGS Sbjct: 314 DISVVGDLAAAMSHHPRRPARPVPGVSPAAKQMGRAAAANILRRLRGEPTRPFRYRDYGS 373 Query: 350 LATIGRKAAIAMV----GKLKFSGYPAWLFWLFVHVYFLIGFRNRIMVMADWAWAYFTFK 405 LATIGR +A+ + G++KFSGYPAWLFWLF HVYFLIGFRNRI+V+ DWA AY++ + Sbjct: 374 LATIGRNSAVVDLWTHFGRVKFSGYPAWLFWLFAHVYFLIGFRNRIVVLFDWATAYWSRQ 433 Query: 406 RSARVISATMSTQA 419 R ARV++ T A Sbjct: 434 RYARVVTNIGGTAA 447 >ref|YP_001021407.1| NADH dehydrogenase [Methylibium petroleiphilum PM1] gb|ABM95172.1| NADH dehydrogenase [Methylibium petroleiphilum PM1] Length = 438 Score = 535 bits (1378), Expect = e-150, Method: Compositional matrix adjust. Identities = 267/426 (62%), Positives = 327/426 (76%), Gaps = 17/426 (3%) Query: 4 VVIIGCGFGGLAAARELANAEVRITMIDRSNHHLFQPLLYQVATAGLSAPAISAPIRAIL 63 +VIIGCGFGG+ A R L+ A+V IT++DR+NHHLFQPLLYQVATA LSAPAIS PIR IL Sbjct: 1 MVIIGCGFGGIEAVRSLSRADVEITLVDRTNHHLFQPLLYQVATANLSAPAISGPIRHIL 60 Query: 64 AHQR---NLTTLMAAVTGIDTAAKTVQLEDGSTMAYDHLIVAAGSTHSYFGRDEWSSLAP 120 + NLT L+ VTGIDTAA++V L+ +AYDHLIVAAG+THSYFG D+W++ AP Sbjct: 61 RREMQRGNLTILLGEVTGIDTAARSVTLDGREPIAYDHLIVAAGATHSYFGHDDWAAHAP 120 Query: 121 GLKTLEDAFEIRKRILMAFERAERESDARRRQEWLTFTVIGGGATGVEMAGTLVEIARHT 180 GLKTL DAF IR+R+LMAFE AERE+D +R+ WLTF V+G G TGVE+AG L EIA HT Sbjct: 121 GLKTLADAFTIRRRVLMAFEHAEREADPAKREAWLTFAVVGAGPTGVELAGQLAEIAHHT 180 Query: 181 LAGEFRNIDPHSARVVLIEGSDRILGAYPPDLSDKAREQLQKLGVDVRTGSRVVHIDETC 240 L EFR ID +RVVL+EG R+LGA+ LS +A EQLQ LGV+VRTG+ V ID Sbjct: 181 LHDEFRRIDSRRSRVVLVEGGPRVLGAFSEQLSQRALEQLQSLGVEVRTGASVTAIDAEG 240 Query: 241 VRYTNFDGEQTLSTRTVIWSAGVAASPLGRAL----GVELDRAGRVPVSPELNIAGHDDV 296 + Y DG Q ++ +TV+W+AGVAAS LGRAL G LDRAGRV V P+L++AGH ++ Sbjct: 241 LSYAGTDGPQRIAAQTVVWAAGVAASKLGRALAELTGCTLDRAGRVVVEPDLSLAGHPEI 300 Query: 297 YVIGDLAAAQSEGK-----PVPGVSPAAKQMGRVAARNIKHRIAGQTPETFVYQDYGSLA 351 +V+GDLAAAQS K PVPGVSPAAKQMGR AA N+ R+ G+ F Y DYG+LA Sbjct: 301 HVVGDLAAAQSHPKRGAPTPVPGVSPAAKQMGRTAATNLLRRLRGEPTAAFRYNDYGALA 360 Query: 352 TIGRKAAIAMV-----GKLKFSGYPAWLFWLFVHVYFLIGFRNRIMVMADWAWAYFTFKR 406 TIGR+AAIAMV G++ FSG PAWLFWLFVH+YFLIGFRNR++V++DWAWAYF+F+R Sbjct: 361 TIGRRAAIAMVDLPVFGRVHFSGMPAWLFWLFVHIYFLIGFRNRLVVLSDWAWAYFSFER 420 Query: 407 SARVIS 412 ARV++ Sbjct: 421 QARVVA 426 >ref|YP_004156502.1| faD-dependent pyridine nucleotide-disulfide oxidoreductase [Variovorax paradoxus EPS] gb|ADU38391.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Variovorax paradoxus EPS] Length = 451 Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust. Identities = 259/431 (60%), Positives = 323/431 (74%), Gaps = 20/431 (4%) Query: 2 PHVVIIGCGFGGLAAARELANAEVRITMIDRSNHHLFQPLLYQVATAGLSAPAISAPIRA 61 P +VI+GCGFGGL AAR+L A+V +T+ID++NHHLFQPLLYQVATAGL+AP+I+AP+RA Sbjct: 13 PQIVIVGCGFGGLEAARKLQRADVDVTVIDKTNHHLFQPLLYQVATAGLAAPSIAAPVRA 72 Query: 62 ILAHQRNLTTLMAAVTGIDTAAKTVQLEDGSTMAYDHLIVAAGSTHSYFGRDEWSSLAPG 121 + Q+N+TTL+ V+ ID A +TVQL G+ + YDHLIVAAG+THSYFG DEW+ +APG Sbjct: 73 LFRKQQNITTLLGEVSAIDPAGRTVQLASGTQVPYDHLIVAAGATHSYFGHDEWAPVAPG 132 Query: 122 LKTLEDAFEIRKRILMAFERAERESDARRRQEWLTFTVIGGGATGVEMAGTLVEIARHTL 181 LKTL DAFEIR+R+L++FE AE +D R+ LTF VIG G TGVEMAGTL EIA+HTL Sbjct: 133 LKTLADAFEIRRRVLLSFETAETTTDPALRRALLTFVVIGAGPTGVEMAGTLAEIAKHTL 192 Query: 182 AGEFRNIDPHSARVVLIEGSDRILGAYPPDLSDKAREQLQKLGVDVRTGSRVVHIDETCV 241 +GEFR+IDP S++V+L+EG R+L A P LS KA EQL+KLGV+VR +RV ID T + Sbjct: 193 SGEFRHIDPSSSQVLLVEGGPRVLQAMPESLSQKALEQLEKLGVEVRLNARVTAIDATGL 252 Query: 242 RYTN---FDGEQTLSTR----TVIWSAGVAASPLGRAL----GVELDRAGRVPVSPELNI 290 DG S R V+W+AGVAASPLGR L GVE DRAGR+ V P+L++ Sbjct: 253 EVQTGGGADGAPVASYRIDSSCVVWAAGVAASPLGRMLGTATGVECDRAGRIKVEPDLSL 312 Query: 291 AGHDDVYVIGDLAAAQSEG-----KPVPGVSPAAKQMGRVAARNIKHRIAGQTPETFVYQ 345 AGH ++ V+GDLAAA S KPVPGVSP AKQMGR AA NI R+AGQ F Y Sbjct: 313 AGHPEISVVGDLAAAMSHAPGKPPKPVPGVSPGAKQMGRAAASNILRRMAGQPTVPFRYA 372 Query: 346 DYGSLATIGRKAAIAMVGK----LKFSGYPAWLFWLFVHVYFLIGFRNRIMVMADWAWAY 401 DYG+LATIGR +A+ +G L+FSG AWLFWLF H YFLIGFRNR++VM DWA AY Sbjct: 373 DYGNLATIGRNSAVVDLGTPFGPLRFSGRLAWLFWLFAHAYFLIGFRNRVVVMMDWAGAY 432 Query: 402 FTFKRSARVIS 412 ++F+R+ARV++ Sbjct: 433 WSFQRNARVVA 443 >ref|YP_453077.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018] dbj|BAE70803.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 430 Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust. Identities = 241/409 (58%), Positives = 307/409 (75%), Gaps = 4/409 (0%) Query: 3 HVVIIGCGFGGLAAARELANAEVRITMIDRSNHHLFQPLLYQVATAGLSAPAISAPIRAI 62 H+V++G GF GL A R L + +RIT+IDR NHHLFQPLLYQVATAGLSAP I+AP+R I Sbjct: 11 HLVVVGGGFAGLWATRALDDPNIRITLIDRQNHHLFQPLLYQVATAGLSAPDIAAPLRHI 70 Query: 63 LAHQRNLTTLMAAVTGIDTAAKTVQLEDGSTMAYDHLIVAAGSTHSYFGRDEWSSLAPGL 122 L QRN+ L+ VT I + + V L DG+T+ YD L++A G+TH+YFG D+W+ APGL Sbjct: 71 LREQRNVEVLLGDVTDIAPSRREVVLADGNTLGYDMLLLATGATHAYFGNDQWAEHAPGL 130 Query: 123 KTLEDAFEIRKRILMAFERAERESDARRRQEWLTFTVIGGGATGVEMAGTLVEIARHTLA 182 KTL DA +R+++L+AFERAE ESD R WL+F V+GGG TGVE+AGTL EIARHTL Sbjct: 131 KTLYDALVLRRKLLLAFERAEAESDPAARAAWLSFAVVGGGPTGVELAGTLAEIARHTLK 190 Query: 183 GEFRNIDPHSARVVLIEGSDRILGAYPPDLSDKAREQLQKLGVDVRTGSRVVHIDETCVR 242 EFR+IDP ARV L+E R+L ++P DL+DKAR+QLQ+LGV+V T + V HID + Sbjct: 191 NEFRHIDPQQARVRLVEAGPRVLPSFPEDLTDKARKQLQRLGVEVHTSAPVTHIDALGYQ 250 Query: 243 YTNFDGEQTLSTRTVIWSAGVAASPLGRALGVELDRAGRVPVSPELNIAGHDDVYVIGDL 302 G+ + RTV+W+AGVAASPL R LGV LDRAGRV V +L++ GH +++V GDL Sbjct: 251 L----GDTFVPARTVVWAAGVAASPLARTLGVPLDRAGRVLVEADLSVPGHPEIFVGGDL 306 Query: 303 AAAQSEGKPVPGVSPAAKQMGRVAARNIKHRIAGQTPETFVYQDYGSLATIGRKAAIAMV 362 A+ Q +G+PVPGV+PAAKQMG+ A+ I+ R GQT F YQDYG+LATIGR AAI V Sbjct: 307 ASVQQDGRPVPGVAPAAKQMGKHIAKAIRARHRGQTAPAFRYQDYGNLATIGRMAAIVHV 366 Query: 363 GKLKFSGYPAWLFWLFVHVYFLIGFRNRIMVMADWAWAYFTFKRSARVI 411 GKLK SG AW FWL HVYFLIGFRNR +V+ +WA AY++++R+AR+I Sbjct: 367 GKLKLSGIVAWWFWLAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARII 415 >ref|NP_639114.1| NADH dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] ref|YP_244901.1| NADH dehydrogenase [Xanthomonas campestris pv. campestris str. 8004] gb|AAM43026.1| NADH dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAY50881.1| NADH dehydrogenase [Xanthomonas campestris pv. campestris str. 8004] Length = 428 Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust. Identities = 240/409 (58%), Positives = 308/409 (75%), Gaps = 4/409 (0%) Query: 3 HVVIIGCGFGGLAAARELANAEVRITMIDRSNHHLFQPLLYQVATAGLSAPAISAPIRAI 62 H+V++G GF GL A R LA+ ++RIT+IDR NHHLFQPLLYQVATAGLSAP I+AP+R I Sbjct: 11 HLVVVGGGFAGLWATRALADPDIRITLIDRQNHHLFQPLLYQVATAGLSAPDIAAPLRHI 70 Query: 63 LAHQRNLTTLMAAVTGIDTAAKTVQLEDGSTMAYDHLIVAAGSTHSYFGRDEWSSLAPGL 122 L QRN+ L+ V I T + V L DG+T+ YD L++A G+TH+YFG D W+ APGL Sbjct: 71 LREQRNVEVLLGDVAEIATDRRAVVLADGNTVNYDMLLLATGATHAYFGNDHWAEHAPGL 130 Query: 123 KTLEDAFEIRKRILMAFERAERESDARRRQEWLTFTVIGGGATGVEMAGTLVEIARHTLA 182 KTL DA +R+++L+AFERAE ESD R WL+F V+GGG TGVE+AGTL EIARHTL Sbjct: 131 KTLYDALVLRRKLLLAFERAEAESDPAARAAWLSFAVVGGGPTGVELAGTLAEIARHTLK 190 Query: 183 GEFRNIDPHSARVVLIEGSDRILGAYPPDLSDKAREQLQKLGVDVRTGSRVVHIDETCVR 242 EFR+IDP ARV L+E R+L ++P DL+DKAR+QL++LGV+V TG+ V +ID + Sbjct: 191 NEFRHIDPQQARVRLVEAGPRVLPSFPDDLTDKARKQLERLGVEVHTGTPVTNIDAFGYQ 250 Query: 243 YTNFDGEQTLSTRTVIWSAGVAASPLGRALGVELDRAGRVPVSPELNIAGHDDVYVIGDL 302 G+ + RTV+W+AGVAASPL R LGV LDRAGRV V P+L++ GH +++V GDL Sbjct: 251 L----GDTFVPARTVVWAAGVAASPLARTLGVPLDRAGRVLVEPDLSVPGHPEIFVGGDL 306 Query: 303 AAAQSEGKPVPGVSPAAKQMGRVAARNIKHRIAGQTPETFVYQDYGSLATIGRKAAIAMV 362 A+ Q +G+PVPGV+PAAKQMG+ A+ I+ R GQ F YQD+G+LATIGR AAI V Sbjct: 307 ASVQQDGRPVPGVAPAAKQMGKHIAKAIRARQRGQAAPAFHYQDFGNLATIGRMAAIVHV 366 Query: 363 GKLKFSGYPAWLFWLFVHVYFLIGFRNRIMVMADWAWAYFTFKRSARVI 411 GKLK SG AW FWL HVYFLIGFRNR +V+ +WA AY++++R+AR+I Sbjct: 367 GKLKLSGIVAWWFWLAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARII 415 >gb|AEL05452.1| NADH dehydrogenase [Xanthomonas campestris pv. raphani 756C] Length = 419 Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust. Identities = 240/409 (58%), Positives = 308/409 (75%), Gaps = 4/409 (0%) Query: 3 HVVIIGCGFGGLAAARELANAEVRITMIDRSNHHLFQPLLYQVATAGLSAPAISAPIRAI 62 H+V++G GF GL A R LA+ ++RIT+IDR NHHLFQPLLYQVATAGLSAP I+AP+R I Sbjct: 2 HLVVVGGGFAGLWATRALADPDIRITLIDRQNHHLFQPLLYQVATAGLSAPDIAAPLRHI 61 Query: 63 LAHQRNLTTLMAAVTGIDTAAKTVQLEDGSTMAYDHLIVAAGSTHSYFGRDEWSSLAPGL 122 L QRN+ L+ V I T + V L DG+T+ YD L++A G+TH+YFG D W+ APGL Sbjct: 62 LREQRNVEVLLGDVADIATDRRAVVLADGNTVNYDMLLLATGATHAYFGNDHWAEHAPGL 121 Query: 123 KTLEDAFEIRKRILMAFERAERESDARRRQEWLTFTVIGGGATGVEMAGTLVEIARHTLA 182 KTL DA +R+++L+AFERAE ESD R WL+F V+GGG TGVE+AGTL EIARHTL Sbjct: 122 KTLYDALVLRRKLLLAFERAEAESDPAARAAWLSFAVVGGGPTGVELAGTLAEIARHTLK 181 Query: 183 GEFRNIDPHSARVVLIEGSDRILGAYPPDLSDKAREQLQKLGVDVRTGSRVVHIDETCVR 242 EFR+IDP ARV L+E R+L ++P DL+DKAR+QL++LGV+V TG+ V +ID + Sbjct: 182 NEFRHIDPQQARVRLVEAGPRVLPSFPDDLTDKARKQLERLGVEVHTGTPVTNIDAFGYQ 241 Query: 243 YTNFDGEQTLSTRTVIWSAGVAASPLGRALGVELDRAGRVPVSPELNIAGHDDVYVIGDL 302 G+ + RTV+W+AGVAASPL R LGV LDRAGRV V P+L++ GH +++V GDL Sbjct: 242 L----GDTFVPARTVVWAAGVAASPLARTLGVPLDRAGRVLVEPDLSVPGHPEIFVGGDL 297 Query: 303 AAAQSEGKPVPGVSPAAKQMGRVAARNIKHRIAGQTPETFVYQDYGSLATIGRKAAIAMV 362 A+ Q +G+PVPGV+PAAKQMG+ A+ I+ R GQ F YQD+G+LATIGR AAI V Sbjct: 298 ASVQQDGRPVPGVAPAAKQMGKHIAKAIRARQRGQAAPAFHYQDFGNLATIGRMAAIVHV 357 Query: 363 GKLKFSGYPAWLFWLFVHVYFLIGFRNRIMVMADWAWAYFTFKRSARVI 411 GKLK SG AW FWL HVYFLIGFRNR +V+ +WA AY++++R+AR+I Sbjct: 358 GKLKLSGIVAWWFWLAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARII 406 >ref|YP_202933.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331] gb|AAW77548.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 470 Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust. Identities = 241/409 (58%), Positives = 306/409 (74%), Gaps = 4/409 (0%) Query: 3 HVVIIGCGFGGLAAARELANAEVRITMIDRSNHHLFQPLLYQVATAGLSAPAISAPIRAI 62 H+V++G GF GL A R L + +RIT+IDR NHHLFQPLLYQVATAGLSAP I+AP+R I Sbjct: 51 HLVVVGGGFAGLWATRALDDPNIRITLIDRQNHHLFQPLLYQVATAGLSAPDIAAPLRHI 110 Query: 63 LAHQRNLTTLMAAVTGIDTAAKTVQLEDGSTMAYDHLIVAAGSTHSYFGRDEWSSLAPGL 122 L QRN+ L+ VT I + + V L DG+T+ YD L++A G+TH+YFG D+W+ APGL Sbjct: 111 LREQRNVEVLLGDVTDIAPSRREVVLADGNTLGYDMLLLATGATHAYFGNDQWAEHAPGL 170 Query: 123 KTLEDAFEIRKRILMAFERAERESDARRRQEWLTFTVIGGGATGVEMAGTLVEIARHTLA 182 KTL DA +R+++L+AFERAE ESD R WL+F V+GGG TGVE+AGTL EIARHTL Sbjct: 171 KTLYDALVLRRKLLLAFERAEAESDPAARAAWLSFAVVGGGPTGVELAGTLSEIARHTLK 230 Query: 183 GEFRNIDPHSARVVLIEGSDRILGAYPPDLSDKAREQLQKLGVDVRTGSRVVHIDETCVR 242 EFR+IDP ARV L+E R+L ++P DL+DKAR+QLQ LGV+V T + V HID + Sbjct: 231 NEFRHIDPQQARVRLVEAGPRVLPSFPEDLTDKARKQLQHLGVEVHTSAPVTHIDALGYQ 290 Query: 243 YTNFDGEQTLSTRTVIWSAGVAASPLGRALGVELDRAGRVPVSPELNIAGHDDVYVIGDL 302 G+ + RTV+W+AGVAASPL R LGV LDRAGRV V +L++ GH +++V GDL Sbjct: 291 L----GDTFVPARTVVWAAGVAASPLARTLGVPLDRAGRVLVEADLSVPGHPEIFVGGDL 346 Query: 303 AAAQSEGKPVPGVSPAAKQMGRVAARNIKHRIAGQTPETFVYQDYGSLATIGRKAAIAMV 362 A+ Q +G+PVPGV+PAAKQMG+ A+ I+ R GQT F YQDYG+LATIGR AAI V Sbjct: 347 ASVQQDGRPVPGVAPAAKQMGKHIAKAIRARHRGQTAPAFRYQDYGNLATIGRMAAIVHV 406 Query: 363 GKLKFSGYPAWLFWLFVHVYFLIGFRNRIMVMADWAWAYFTFKRSARVI 411 GKLK SG AW FWL HVYFLIGFRNR +V+ +WA AY++++R+AR+I Sbjct: 407 GKLKLSGIVAWWFWLAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARII 455 >ref|ZP_06492467.1| NADH dehydrogenase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 417 Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust. Identities = 241/406 (59%), Positives = 305/406 (75%), Gaps = 4/406 (0%) Query: 6 IIGCGFGGLAAARELANAEVRITMIDRSNHHLFQPLLYQVATAGLSAPAISAPIRAILAH 65 ++G GF GL A R L + +RIT+IDR NHHLFQPLLYQVATAGLSAP I+AP+R IL Sbjct: 1 MVGGGFAGLWATRALDDPNIRITLIDRQNHHLFQPLLYQVATAGLSAPDIAAPLRHILRE 60 Query: 66 QRNLTTLMAAVTGIDTAAKTVQLEDGSTMAYDHLIVAAGSTHSYFGRDEWSSLAPGLKTL 125 QRN+ L+ VT I A + V L DG+T+ YD L++A G+TH+YFG D W+ APGLKTL Sbjct: 61 QRNVEVLLGDVTDIAPARREVVLADGNTLGYDMLLLATGATHAYFGNDHWAEHAPGLKTL 120 Query: 126 EDAFEIRKRILMAFERAERESDARRRQEWLTFTVIGGGATGVEMAGTLVEIARHTLAGEF 185 DA +R+++L+AFERAE ESD R WL+F V+GGG TGVE+AGTL EIARHTL EF Sbjct: 121 YDALVLRRKLLLAFERAEAESDPAARAAWLSFAVVGGGPTGVELAGTLAEIARHTLKNEF 180 Query: 186 RNIDPHSARVVLIEGSDRILGAYPPDLSDKAREQLQKLGVDVRTGSRVVHIDETCVRYTN 245 R+IDP ARV L+E R+L ++P DL+DKAR+QL++LGV+V TG+ V HID + Sbjct: 181 RHIDPQQARVRLVEAGPRVLPSFPEDLTDKARKQLERLGVEVHTGTPVTHIDALGYQL-- 238 Query: 246 FDGEQTLSTRTVIWSAGVAASPLGRALGVELDRAGRVPVSPELNIAGHDDVYVIGDLAAA 305 G+ + RTV+W+AGVAASPL R LGV LDRAGRV V P+L++ GH +++V GDLA+ Sbjct: 239 --GDTFVPARTVVWAAGVAASPLARTLGVPLDRAGRVLVEPDLSVPGHPEIFVGGDLASV 296 Query: 306 QSEGKPVPGVSPAAKQMGRVAARNIKHRIAGQTPETFVYQDYGSLATIGRKAAIAMVGKL 365 Q +G+PVPGV+PAAKQMG+ A+ I R GQT TF YQD+G+LATIGR AAI VGKL Sbjct: 297 QQDGRPVPGVAPAAKQMGKHIAKAIGARHRGQTTPTFRYQDFGNLATIGRMAAIVHVGKL 356 Query: 366 KFSGYPAWLFWLFVHVYFLIGFRNRIMVMADWAWAYFTFKRSARVI 411 K SG AW FWL HVYFLIGFRNR +V+ +WA AY++++R+AR+I Sbjct: 357 KLSGIVAWWFWLAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARII 402 >ref|YP_001905356.1| Putative NADH dehydrogenase [Xanthomonas campestris pv. campestris str. B100] emb|CAP53318.1| Putative NADH dehydrogenase [Xanthomonas campestris pv. campestris] Length = 461 Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust. Identities = 240/409 (58%), Positives = 308/409 (75%), Gaps = 4/409 (0%) Query: 3 HVVIIGCGFGGLAAARELANAEVRITMIDRSNHHLFQPLLYQVATAGLSAPAISAPIRAI 62 H+V++G GF GL A R LA+ ++RIT+IDR NHHLFQPLLYQVATAGLSAP I+AP+R I Sbjct: 44 HLVVVGGGFAGLWATRALADPDIRITLIDRQNHHLFQPLLYQVATAGLSAPDIAAPLRHI 103 Query: 63 LAHQRNLTTLMAAVTGIDTAAKTVQLEDGSTMAYDHLIVAAGSTHSYFGRDEWSSLAPGL 122 L QRN+ L+ V I T + V L DG+T+ YD L++A G+TH+YFG D W+ APGL Sbjct: 104 LREQRNVEVLLGDVAEIATDRRAVVLADGNTVNYDMLLLATGATHAYFGNDHWAEHAPGL 163 Query: 123 KTLEDAFEIRKRILMAFERAERESDARRRQEWLTFTVIGGGATGVEMAGTLVEIARHTLA 182 KTL DA +R+++L+AFERAE ESD R WL+F V+GGG TGVE+AGTL EIARHTL Sbjct: 164 KTLYDALVLRRKLLLAFERAEAESDPAARAAWLSFAVVGGGPTGVELAGTLAEIARHTLK 223 Query: 183 GEFRNIDPHSARVVLIEGSDRILGAYPPDLSDKAREQLQKLGVDVRTGSRVVHIDETCVR 242 EFR+IDP ARV L+E R+L ++P DL+DKAR+QL++LGV+V TG+ V +ID + Sbjct: 224 NEFRHIDPQQARVRLVEAGPRVLPSFPDDLTDKARKQLERLGVEVHTGTPVTNIDAFGYQ 283 Query: 243 YTNFDGEQTLSTRTVIWSAGVAASPLGRALGVELDRAGRVPVSPELNIAGHDDVYVIGDL 302 G+ + RTV+W+AGVAASPL R LGV LDRAGRV V P+L++ GH +++V GDL Sbjct: 284 L----GDTFVPARTVVWAAGVAASPLARTLGVPLDRAGRVLVEPDLSVPGHPEIFVGGDL 339 Query: 303 AAAQSEGKPVPGVSPAAKQMGRVAARNIKHRIAGQTPETFVYQDYGSLATIGRKAAIAMV 362 A+ Q +G+PVPGV+PAAKQMG+ A+ I+ R GQ F YQD+G+LATIGR AAI V Sbjct: 340 ASVQQDGRPVPGVAPAAKQMGKHIAKAIRARQRGQAAPAFHYQDFGNLATIGRMAAIVHV 399 Query: 363 GKLKFSGYPAWLFWLFVHVYFLIGFRNRIMVMADWAWAYFTFKRSARVI 411 GKLK SG AW FWL HVYFLIGFRNR +V+ +WA AY++++R+AR+I Sbjct: 400 GKLKLSGIVAWWFWLAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARII 448