BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0311.p (712 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775176.1| polyribonucleotide nucleotidyltransferase [H... 1427 0.0 emb|CAM32674.1| Polyribonucleotide nucleotidyltransferase [Herba... 1367 0.0 ref|YP_001100109.1| polynucleotide phosphorylase/polyadenylase [... 1278 0.0 ref|YP_004753711.1| polyribonucleotide nucleotidyltransferase [C... 1274 0.0 ref|YP_001353149.1| polynucleotide phosphorylase/polyadenylase [... 1269 0.0 ref|ZP_08272663.1| Polyribonucleotide nucleotidyltransferase [Ox... 1252 0.0 ref|ZP_04575912.1| polyribonucleotide nucleotidyltransferase [Ox... 1197 0.0 ref|ZP_04578107.1| polyribonucleotide nucleotidyltransferase [Ox... 1189 0.0 ref|YP_441610.1| polynucleotide phosphorylase/polyadenylase [Bur... 1130 0.0 ref|ZP_02387158.1| polynucleotide phosphorylase/polyadenylase [B... 1129 0.0 >ref|YP_003775176.1| polyribonucleotide nucleotidyltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ63268.1| polyribonucleotide nucleotidyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 712 Score = 1427 bits (3695), Expect = 0.0, Method: Compositional matrix adjust. Identities = 707/712 (99%), Positives = 712/712 (100%) Query: 1 VFNKVTKTFQYGQHQVTLETGEIARQASGAVVVSVEDTVILATVVARKEAKPGQDFFPLT 60 +FNKVTKTFQYGQHQVTLETGEIARQASGAVVVSVEDTVILATVVARKEAKPGQDFFPLT Sbjct: 1 MFNKVTKTFQYGQHQVTLETGEIARQASGAVVVSVEDTVILATVVARKEAKPGQDFFPLT 60 Query: 61 VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV 120 VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV Sbjct: 61 VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV 120 Query: 121 NPEIDPDIPAMIGASAALSLAGIPFNGPVGAARVGYIDGQYVLNPTTSQLKSSQLDLVVA 180 NPEIDPDIPAMIGASAALSLAGIPFNGPVGAARVGYIDGQYVLNPTTSQLKSSQLDLVVA Sbjct: 121 NPEIDPDIPAMIGASAALSLAGIPFNGPVGAARVGYIDGQYVLNPTTSQLKSSQLDLVVA 180 Query: 181 GTETAVLMVESEADQLSEEVMLGAVVFGHDQSKAVIEAIHALVREGGKPEVQWTAPAKNE 240 GTETAVLMVESEADQLSEEVMLGAVVFGHDQSKAVIEAIHALVR+GGKPEVQWTAPAKNE Sbjct: 181 GTETAVLMVESEADQLSEEVMLGAVVFGHDQSKAVIEAIHALVRDGGKPEVQWTAPAKNE 240 Query: 241 ALIARVSQLAEGPLREAYQTKDKQARTEKLKAVSAQVNEALIAEAAANNGVAADAAEVGS 300 ALIARVSQLAEGPLREAYQTKDKQARTEKLKAV+AQVNEAL+AEAAANNGVAADAAEVGS Sbjct: 241 ALIARVSQLAEGPLREAYQTKDKQARTEKLKAVTAQVNEALVAEAAANNGVAADAAEVGS 300 Query: 301 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIAT 360 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIAT Sbjct: 301 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIAT 360 Query: 361 LGTARDEQKIDGLLGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL 420 LGTARDEQKIDGLLGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL Sbjct: 361 LGTARDEQKIDGLLGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL 420 Query: 421 PAADEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNKF 480 PAADEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNKF Sbjct: 421 PAADEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNKF 480 Query: 481 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALEQAKEGRHHILG 540 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALEQAKEGRHHILG Sbjct: 481 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALEQAKEGRHHILG 540 Query: 541 KMQEAVPAGRAELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV 600 KMQEAVPAGRAELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV Sbjct: 541 KMQEAVPAGRAELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV 600 Query: 601 TIASVDASAGQEAKRRIEELTASVEVGKVYEGTVLKLLDFGAIVQVLPGKDGLLHISQIA 660 TIASVDASAGQEAKRRIEELTASVEVGK+YEGTVLKLLDFGAIVQVLPGKDGLLHISQIA Sbjct: 601 TIASVDASAGQEAKRRIEELTASVEVGKIYEGTVLKLLDFGAIVQVLPGKDGLLHISQIA 660 Query: 661 NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQAEEGGEAAAPQEAQ 712 NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQAEEGGEAAAPQEAQ Sbjct: 661 NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQAEEGGEAAAPQEAQ 712 >emb|CAM32674.1| Polyribonucleotide nucleotidyltransferase [Herbaspirillum seropedicae] Length = 712 Score = 1367 bits (3539), Expect = 0.0, Method: Compositional matrix adjust. Identities = 676/712 (94%), Positives = 693/712 (97%) Query: 1 VFNKVTKTFQYGQHQVTLETGEIARQASGAVVVSVEDTVILATVVARKEAKPGQDFFPLT 60 +FNKVTKTFQYGQHQVTLETGEIARQASGAVVVSVEDTVILATVVARKEAKPGQDFFPLT Sbjct: 1 MFNKVTKTFQYGQHQVTLETGEIARQASGAVVVSVEDTVILATVVARKEAKPGQDFFPLT 60 Query: 61 VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV 120 VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV Sbjct: 61 VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV 120 Query: 121 NPEIDPDIPAMIGASAALSLAGIPFNGPVGAARVGYIDGQYVLNPTTSQLKSSQLDLVVA 180 NPEIDPDIPAMIGASAALSLAGIPFNGPVGAARVGYIDGQYVLNPTTSQLKSSQLDLVVA Sbjct: 121 NPEIDPDIPAMIGASAALSLAGIPFNGPVGAARVGYIDGQYVLNPTTSQLKSSQLDLVVA 180 Query: 181 GTETAVLMVESEADQLSEEVMLGAVVFGHDQSKAVIEAIHALVREGGKPEVQWTAPAKNE 240 GTETAVLMVESEADQLSEEVMLGAVVFGHDQSKAVIEAIHALVR+GGKPEVQWTAPAKNE Sbjct: 181 GTETAVLMVESEADQLSEEVMLGAVVFGHDQSKAVIEAIHALVRDGGKPEVQWTAPAKNE 240 Query: 241 ALIARVSQLAEGPLREAYQTKDKQARTEKLKAVSAQVNEALIAEAAANNGVAADAAEVGS 300 ALIARVSQLAEGPLREAYQTKDKQARTEKLKAV+AQVNEAL+AEAAANNGVAADAAEVGS Sbjct: 241 ALIARVSQLAEGPLREAYQTKDKQARTEKLKAVTAQVNEALVAEAAANNGVAADAAEVGS 300 Query: 301 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIAT 360 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIAT Sbjct: 301 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIAT 360 Query: 361 LGTARDEQKIDGLLGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL 420 LGTARD Q ID + GEY + F+ HYN PPF+ GE GR+ PKRREIGHGRLAKR ++A + Sbjct: 361 LGTARDGQVIDAVAGEYKENFLFHYNFPPFSVGECGRMMGPKRREIGHGRLAKRGVLAVM 420 Query: 421 PAADEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNKF 480 P+ + F Y++RLVSEITESNGSSSMASVCG LALMDAGVPMKAHVAGIAMGLIKEGNKF Sbjct: 421 PSLEAFPYTIRLVSEITESNGSSSMASVCGSSLALMDAGVPMKAHVAGIAMGLIKEGNKF 480 Query: 481 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALEQAKEGRHHILG 540 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALEQAKEGRHHILG Sbjct: 481 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALEQAKEGRHHILG 540 Query: 541 KMQEAVPAGRAELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV 600 KMQEAVPAGRAELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV Sbjct: 541 KMQEAVPAGRAELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV 600 Query: 601 TIASVDASAGQEAKRRIEELTASVEVGKVYEGTVLKLLDFGAIVQVLPGKDGLLHISQIA 660 TIASVDASAGQEAKRRIEELTASVEVGK+YEGTVLKLLDFGAIVQVLPGKDGLLHISQIA Sbjct: 601 TIASVDASAGQEAKRRIEELTASVEVGKIYEGTVLKLLDFGAIVQVLPGKDGLLHISQIA 660 Query: 661 NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQAEEGGEAAAPQEAQ 712 NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQAEEGGEAAAPQEAQ Sbjct: 661 NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQAEEGGEAAAPQEAQ 712 >ref|YP_001100109.1| polynucleotide phosphorylase/polyadenylase [Herminiimonas arsenicoxydans] sp|A4G647.1|PNP_HERAR RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase emb|CAL61984.1| Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) [Herminiimonas arsenicoxydans] Length = 710 Score = 1278 bits (3308), Expect = 0.0, Method: Compositional matrix adjust. Identities = 632/711 (88%), Positives = 671/711 (94%), Gaps = 2/711 (0%) Query: 1 VFNKVTKTFQYGQHQVTLETGEIARQASGAVVVSVEDTVILATVVARKEAKPGQDFFPLT 60 +FNKVTKTFQYGQH VTLETGEIARQASGAV+VS+EDTV+LATVVARK+AKPGQDFFPLT Sbjct: 1 MFNKVTKTFQYGQHTVTLETGEIARQASGAVLVSIEDTVVLATVVARKDAKPGQDFFPLT 60 Query: 61 VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV 120 VDY+EKTYAAGRIPGGFFKREG+PSEKETLTSRLIDRPIRPLFPEGYLNEVQ+IIHV+SV Sbjct: 61 VDYVEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGYLNEVQIIIHVMSV 120 Query: 121 NPEIDPDIPAMIGASAALSLAGIPFNGPVGAARVGYIDGQYVLNPTTSQLKSSQLDLVVA 180 NPEIDPDI AMIGASAALS++GIPF GP+GAARVGYIDGQY+LNPT +QLK+SQ+DLVVA Sbjct: 121 NPEIDPDIAAMIGASAALSVSGIPFAGPLGAARVGYIDGQYILNPTATQLKTSQMDLVVA 180 Query: 181 GTETAVLMVESEADQLSEEVMLGAVVFGHDQSKAVIEAIHALVREGGKPEVQWTAPAKNE 240 GTE AVLMVESEA QLSEEVMLGAVVFGHDQ KAVI+AIH LVR+GGKPEVQW PAKNE Sbjct: 181 GTEAAVLMVESEAQQLSEEVMLGAVVFGHDQMKAVIDAIHDLVRDGGKPEVQWAPPAKNE 240 Query: 241 ALIARVSQLAEGPLREAYQTKDKQARTEKLKAVSAQVNEALIAEAAANNGVAADAAEVGS 300 ALIARV+ AE LR AYQTKDKQART KLK A+VN + AEA + G A D +EVG+ Sbjct: 241 ALIARVAHFAEEKLRAAYQTKDKQARTAKLKDAFAEVNAEVAAEATSVGGAAPDTSEVGN 300 Query: 301 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIAT 360 ILFDLEAKIVRSQIL+GEPRIDGRDTRTVRPI+IRTGVLPRTHGSALFTRGETQALVIAT Sbjct: 301 ILFDLEAKIVRSQILDGEPRIDGRDTRTVRPITIRTGVLPRTHGSALFTRGETQALVIAT 360 Query: 361 LGTARDEQKIDGLLGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL 420 LGTARDEQKID L+GEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL Sbjct: 361 LGTARDEQKIDALMGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL 420 Query: 421 PAADEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNKF 480 PA ++FSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPM+AHVAGIAMGLIK+G KF Sbjct: 421 PAPEDFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMQAHVAGIAMGLIKDGGKF 480 Query: 481 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALEQAKEGRHHILG 540 AVL+DILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVAL QAKEGR HILG Sbjct: 481 AVLSDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALAQAKEGRIHILG 540 Query: 541 KMQEAVPAG-RAELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGV 599 +M++AVP+G ELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGV Sbjct: 541 EMEKAVPSGTTGELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGV 600 Query: 600 VTIASVDASAGQEAKRRIEELTASVEVGKVYEGTVLKLLDFGAIVQVLPGKDGLLHISQI 659 VTIASVDA+AGQEAKRRIEELTASVEVGKVYEGTVLKLLDFGAIVQV+PGKDGLLHISQI Sbjct: 601 VTIASVDAAAGQEAKRRIEELTASVEVGKVYEGTVLKLLDFGAIVQVMPGKDGLLHISQI 660 Query: 660 ANERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQAEEGGEAAAPQE 710 ANERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAA AE+ E AAPQE Sbjct: 661 ANERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAALAEDNPE-AAPQE 710 >ref|YP_004753711.1| polyribonucleotide nucleotidyltransferase [Collimonas fungivorans Ter331] gb|AEK62888.1| Polyribonucleotide nucleotidyltransferase [Collimonas fungivorans Ter331] Length = 714 Score = 1274 bits (3296), Expect = 0.0, Method: Compositional matrix adjust. Identities = 640/704 (90%), Positives = 668/704 (94%), Gaps = 2/704 (0%) Query: 1 VFNKVTKTFQYGQHQVTLETGEIARQASGAVVVSVEDTVILATVVARKEAKPGQDFFPLT 60 VFNKVTKTFQYGQHQVTLETGEIARQASGAV+VS+EDTV+LATVVARK+AKPGQDFFPLT Sbjct: 6 VFNKVTKTFQYGQHQVTLETGEIARQASGAVLVSIEDTVVLATVVARKDAKPGQDFFPLT 65 Query: 61 VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV 120 VDY+EKTYAAGRIPGGFFKREG+PSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV Sbjct: 66 VDYVEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV 125 Query: 121 NPEIDPDIPAMIGASAALSLAGIPFNGPVGAARVGYIDGQYVLNPTTSQLKSSQLDLVVA 180 NPEIDPDI AMIGASAALS+AGIPF GPVGAARVGYIDGQYVLNPTTSQL S +DLVVA Sbjct: 126 NPEIDPDIAAMIGASAALSVAGIPFAGPVGAARVGYIDGQYVLNPTTSQLTKSAMDLVVA 185 Query: 181 GTETAVLMVESEADQLSEEVMLGAVVFGHDQSKAVIEAIHALVREGGKPEVQWTAPAKNE 240 GTETAVLMVESEA QLSEE+MLGAVVFGH+QSKAVI AIH LVR+GGKPEV+W+ KNE Sbjct: 186 GTETAVLMVESEAKQLSEEIMLGAVVFGHEQSKAVINAIHELVRDGGKPEVEWSPAPKNE 245 Query: 241 ALIARVSQLAEGPLREAYQTKDKQARTEKLKAVSAQVNEALIAEAAANNGVAADAAEVGS 300 ALIARV+ E LREAYQTKDKQART KLK +A+VN AL AEAA+ G A D++EV Sbjct: 246 ALIARVAHFGEAKLREAYQTKDKQARTTKLKDATAEVNAALAAEAASIGGTAPDSSEVSG 305 Query: 301 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIAT 360 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALV+AT Sbjct: 306 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVVAT 365 Query: 361 LGTARDEQKIDGLLGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL 420 LGTARDEQKID L+GEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRAL AAL Sbjct: 366 LGTARDEQKIDALMGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALQAAL 425 Query: 421 PAADEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNKF 480 PA ++FSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPM+AHVAGIAMGLIKEG+KF Sbjct: 426 PAPEDFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMQAHVAGIAMGLIKEGSKF 485 Query: 481 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALEQAKEGRHHILG 540 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVAL QAKEGR HILG Sbjct: 486 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALAQAKEGRIHILG 545 Query: 541 KMQEAVPAGRAELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV 600 KMQEAVP G+ ELSDFAPRLIT+KINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV Sbjct: 546 KMQEAVPHGKTELSDFAPRLITVKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV 605 Query: 601 TIASVDASAGQEAKRRIEELTASVEVGKVYEGTVLKLLDFGAIVQVLPGKDGLLHISQIA 660 TIASVDA+AGQEAKRRIEELTASVEVGKVYEGTVLKLLDFGAIVQVLPGKDGLLHISQIA Sbjct: 606 TIASVDAAAGQEAKRRIEELTASVEVGKVYEGTVLKLLDFGAIVQVLPGKDGLLHISQIA 665 Query: 661 NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQAEEGGE 704 NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQ EGGE Sbjct: 666 NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQ--EGGE 707 >ref|YP_001353149.1| polynucleotide phosphorylase/polyadenylase [Janthinobacterium sp. Marseille] sp|A6SY02.1|PNP_JANMA RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gb|ABR88266.1| polyribonucleotide nucleotidyltransferase [Janthinobacterium sp. Marseille] Length = 711 Score = 1269 bits (3285), Expect = 0.0, Method: Compositional matrix adjust. Identities = 633/711 (89%), Positives = 669/711 (94%), Gaps = 1/711 (0%) Query: 1 VFNKVTKTFQYGQHQVTLETGEIARQASGAVVVSVEDTVILATVVARKEAKPGQDFFPLT 60 +FNKVTKTFQYGQHQVTLETGEIARQASGAV+VS+EDTV+LATVVA+K+AKPGQDFFPLT Sbjct: 1 MFNKVTKTFQYGQHQVTLETGEIARQASGAVLVSIEDTVVLATVVAKKDAKPGQDFFPLT 60 Query: 61 VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV 120 VDY+EKTYAAGRIPGGFFKREG+PSEKETLTSRLIDRPIRPLFPEGYLNEVQ+IIHV+SV Sbjct: 61 VDYVEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGYLNEVQIIIHVMSV 120 Query: 121 NPEIDPDIPAMIGASAALSLAGIPFNGPVGAARVGYIDGQYVLNPTTSQLKSSQLDLVVA 180 NPEIDPDI AMIGASAALS+AGIPF GPVGAARVGYIDGQYVLNPTTSQL S LDLVVA Sbjct: 121 NPEIDPDIAAMIGASAALSVAGIPFAGPVGAARVGYIDGQYVLNPTTSQLAKSDLDLVVA 180 Query: 181 GTETAVLMVESEADQLSEEVMLGAVVFGHDQSKAVIEAIHALVREGGKPEVQWTAPAKNE 240 GTE AVLMVESEA QLSEEVMLGAVVFGH+Q KAVI+AIH LVR+GGKPEVQW+ KNE Sbjct: 181 GTEIAVLMVESEAKQLSEEVMLGAVVFGHEQMKAVIDAIHDLVRDGGKPEVQWSPAPKNE 240 Query: 241 ALIARVSQLAEGPLREAYQTKDKQARTEKLKAVSAQVNEALIAEAAANNGVAADAAEVGS 300 ALI+RV+ AE LR AYQTKDKQART KLK A+VN L AEAA+ A D AEVG+ Sbjct: 241 ALISRVAHFAEAKLRAAYQTKDKQARTTKLKDAFAEVNNELAAEAASIGAAAPDTAEVGN 300 Query: 301 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIAT 360 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPI+IRTGVLPRTHGSALFTRGETQALVIAT Sbjct: 301 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPITIRTGVLPRTHGSALFTRGETQALVIAT 360 Query: 361 LGTARDEQKIDGLLGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL 420 LGTARDEQKID L+GEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRAL+AAL Sbjct: 361 LGTARDEQKIDALMGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALVAAL 420 Query: 421 PAADEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNKF 480 PA ++FSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPM++HVAGIAMGLIKEG+KF Sbjct: 421 PAPEDFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMQSHVAGIAMGLIKEGSKF 480 Query: 481 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALEQAKEGRHHILG 540 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVAL QAKEGR HILG Sbjct: 481 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALAQAKEGRVHILG 540 Query: 541 KMQEAVPAGRA-ELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGV 599 +M++AVP+G ELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGV Sbjct: 541 EMEKAVPSGTTGELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGV 600 Query: 600 VTIASVDASAGQEAKRRIEELTASVEVGKVYEGTVLKLLDFGAIVQVLPGKDGLLHISQI 659 VTIASVDA+AGQEAKRRIEELTASVEVGK+YEGTVLKLLDFGAIVQV+PGKDGLLHISQI Sbjct: 601 VTIASVDAAAGQEAKRRIEELTASVEVGKIYEGTVLKLLDFGAIVQVMPGKDGLLHISQI 660 Query: 660 ANERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQAEEGGEAAAPQE 710 ANERVNAVADYL+EGQQVRVKVLETDDRGRLKLSMKAA AEE E AA QE Sbjct: 661 ANERVNAVADYLQEGQQVRVKVLETDDRGRLKLSMKAAVAEENPEPAAAQE 711 >ref|ZP_08272663.1| Polyribonucleotide nucleotidyltransferase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33865.1| Polyribonucleotide nucleotidyltransferase [Oxalobacteraceae bacterium IMCC9480] Length = 717 Score = 1252 bits (3240), Expect = 0.0, Method: Compositional matrix adjust. Identities = 623/702 (88%), Positives = 666/702 (94%) Query: 1 VFNKVTKTFQYGQHQVTLETGEIARQASGAVVVSVEDTVILATVVARKEAKPGQDFFPLT 60 +FNKV+KTFQYGQHQVTLETGEIARQASGAV+VS+EDTV+LATVVARK+AKPGQDFFPLT Sbjct: 1 MFNKVSKTFQYGQHQVTLETGEIARQASGAVLVSIEDTVVLATVVARKDAKPGQDFFPLT 60 Query: 61 VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV 120 VDY+EKTYAAGRIPGGFFKREG+PSEKETLTSRLIDRP+RPLFPEGY+NEVQ+IIHVLSV Sbjct: 61 VDYVEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPVRPLFPEGYMNEVQIIIHVLSV 120 Query: 121 NPEIDPDIPAMIGASAALSLAGIPFNGPVGAARVGYIDGQYVLNPTTSQLKSSQLDLVVA 180 NPEIDPDI AMIGASAALS++G+PF+GPVGAARVGYI+GQYVLNPTT+QLKSS LDLVVA Sbjct: 121 NPEIDPDIAAMIGASAALSVSGVPFSGPVGAARVGYINGQYVLNPTTTQLKSSDLDLVVA 180 Query: 181 GTETAVLMVESEADQLSEEVMLGAVVFGHDQSKAVIEAIHALVREGGKPEVQWTAPAKNE 240 GTE AVLMVESEA QLSEEVMLGAVVFGH+Q KAVI+AIH LVR+GGKPE++W AKNE Sbjct: 181 GTEAAVLMVESEAKQLSEEVMLGAVVFGHEQMKAVIDAIHELVRDGGKPEIEWAPAAKNE 240 Query: 241 ALIARVSQLAEGPLREAYQTKDKQARTEKLKAVSAQVNEALIAEAAANNGVAADAAEVGS 300 ALI+RV+ E LR+AYQTKDKQART KLK +++V EAL AEAA+ GVA D+A+V + Sbjct: 241 ALISRVAHFGEAKLRDAYQTKDKQARTAKLKTATSEVMEALKAEAASIAGVAPDSADVNN 300 Query: 301 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIAT 360 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPI+IRTGVLPRTHGSALFTRGETQALVIAT Sbjct: 301 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPIAIRTGVLPRTHGSALFTRGETQALVIAT 360 Query: 361 LGTARDEQKIDGLLGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL 420 LGTARDEQKID L+GEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRAL+AAL Sbjct: 361 LGTARDEQKIDALMGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALLAAL 420 Query: 421 PAADEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNKF 480 P +EFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPM+AHVAGIAMGLIK+G KF Sbjct: 421 PPVEEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMQAHVAGIAMGLIKDGGKF 480 Query: 481 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALEQAKEGRHHILG 540 AVLTDILGDEDHLGDMDFKVAGTA GITALQMDIKIQGITKEIMQVAL QAKEGR HIL Sbjct: 481 AVLTDILGDEDHLGDMDFKVAGTAKGITALQMDIKIQGITKEIMQVALAQAKEGRLHILD 540 Query: 541 KMQEAVPAGRAELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV 600 KMQ+AVP G ELS+FAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV Sbjct: 541 KMQQAVPIGHTELSNFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV 600 Query: 601 TIASVDASAGQEAKRRIEELTASVEVGKVYEGTVLKLLDFGAIVQVLPGKDGLLHISQIA 660 TIASVDASAG EAKRRIEELTASVEVGK+YEGTVLKLLDFGAIVQV+PGKDGLLHISQIA Sbjct: 601 TIASVDASAGLEAKRRIEELTASVEVGKIYEGTVLKLLDFGAIVQVMPGKDGLLHISQIA 660 Query: 661 NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQAEEG 702 NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAA +EEG Sbjct: 661 NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAASEEG 702 >ref|ZP_04575912.1| polyribonucleotide nucleotidyltransferase [Oxalobacter formigenes HOxBLS] gb|EEO26874.1| polyribonucleotide nucleotidyltransferase [Oxalobacter formigenes HOxBLS] Length = 707 Score = 1197 bits (3097), Expect = 0.0, Method: Compositional matrix adjust. Identities = 579/701 (82%), Positives = 641/701 (91%) Query: 1 VFNKVTKTFQYGQHQVTLETGEIARQASGAVVVSVEDTVILATVVARKEAKPGQDFFPLT 60 +FNKV+KTFQYGQH VTLETGEIARQASGAVVVS++DTV+LATVVA+ + KPGQDFFPLT Sbjct: 1 MFNKVSKTFQYGQHTVTLETGEIARQASGAVVVSMDDTVVLATVVAKDDVKPGQDFFPLT 60 Query: 61 VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV 120 VDYIEK+YAAGRIPG FFKREG+PSEKETLTSRLIDRPIRPLFP+GY NEVQVIIHVLSV Sbjct: 61 VDYIEKSYAAGRIPGSFFKREGRPSEKETLTSRLIDRPIRPLFPDGYFNEVQVIIHVLSV 120 Query: 121 NPEIDPDIPAMIGASAALSLAGIPFNGPVGAARVGYIDGQYVLNPTTSQLKSSQLDLVVA 180 NPEIDPDIP+MI ASAAL ++GIPFNGP+GAARVGYIDGQYVLNPT SQL SQLDLVVA Sbjct: 121 NPEIDPDIPSMIAASAALCVSGIPFNGPLGAARVGYIDGQYVLNPTASQLPLSQLDLVVA 180 Query: 181 GTETAVLMVESEADQLSEEVMLGAVVFGHDQSKAVIEAIHALVREGGKPEVQWTAPAKNE 240 GTE AVLMVESEA +L E+VMLGAVVFGH+Q K VI+AI LV EGGKPEV+W PA+NE Sbjct: 181 GTEQAVLMVESEAKELPEDVMLGAVVFGHEQMKVVIDAIDELVSEGGKPEVEWAPPARNE 240 Query: 241 ALIARVSQLAEGPLREAYQTKDKQARTEKLKAVSAQVNEALIAEAAANNGVAADAAEVGS 300 LIA V+++AE LR+AYQ + KQAR+ +L+ + +VN+ L +EA A A D+ EVG+ Sbjct: 241 ELIAAVTRIAEPELRKAYQIRQKQARSSELRHIYEKVNQTLASEAEAKGAAAPDSVEVGN 300 Query: 301 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIAT 360 ILFDLEA IVRSQIL+GEPRIDGRDTRTVRPI+IRTGVLPRTHGSALFTRGETQALV+AT Sbjct: 301 ILFDLEAGIVRSQILDGEPRIDGRDTRTVRPITIRTGVLPRTHGSALFTRGETQALVVAT 360 Query: 361 LGTARDEQKIDGLLGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL 420 LGT+RD QKID L+GEYSD FM+HYNMPPFATGETGRVGTPKRREIGHGRLAKRAL+A L Sbjct: 361 LGTSRDNQKIDALMGEYSDAFMMHYNMPPFATGETGRVGTPKRREIGHGRLAKRALVACL 420 Query: 421 PAADEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNKF 480 P+ DEFSYS+RLVSEI ESNGSSSMASVCGG LALMDAGVP+K HVAGIAMGLIKEGNKF Sbjct: 421 PSQDEFSYSIRLVSEIMESNGSSSMASVCGGSLALMDAGVPVKTHVAGIAMGLIKEGNKF 480 Query: 481 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALEQAKEGRHHILG 540 AVLTDILGDEDHLGDMDFKVAGT+ G+TALQMDIKIQGITKEIMQVAL QA+EGR HILG Sbjct: 481 AVLTDILGDEDHLGDMDFKVAGTSTGVTALQMDIKIQGITKEIMQVALAQAREGRMHILG 540 Query: 541 KMQEAVPAGRAELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV 600 KMQEA+P + ELSDFAPRLIT++INPEKIRDVIGKGGAVIRALTEETG QIDI+D+G+V Sbjct: 541 KMQEAMPQFKTELSDFAPRLITMRINPEKIRDVIGKGGAVIRALTEETGAQIDINDDGIV 600 Query: 601 TIASVDASAGQEAKRRIEELTASVEVGKVYEGTVLKLLDFGAIVQVLPGKDGLLHISQIA 660 TIASVDA+AGQEAKRRIEELTASVE GK Y+GTVLKLLDFGAIVQ+LPGKDGLLHISQIA Sbjct: 601 TIASVDAAAGQEAKRRIEELTASVETGKTYDGTVLKLLDFGAIVQILPGKDGLLHISQIA 660 Query: 661 NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQAEE 701 +ERVNAV+DYL+EGQ VRVKVLETD+RGR+KLSMKA AEE Sbjct: 661 SERVNAVSDYLEEGQSVRVKVLETDERGRIKLSMKAVVAEE 701 >ref|ZP_04578107.1| polyribonucleotide nucleotidyltransferase [Oxalobacter formigenes OXCC13] gb|EEO29080.1| polyribonucleotide nucleotidyltransferase [Oxalobacter formigenes OXCC13] Length = 713 Score = 1189 bits (3076), Expect = 0.0, Method: Compositional matrix adjust. Identities = 574/695 (82%), Positives = 636/695 (91%) Query: 1 VFNKVTKTFQYGQHQVTLETGEIARQASGAVVVSVEDTVILATVVARKEAKPGQDFFPLT 60 +FNKV+KTFQYGQ VT+ETGEIARQASGAV+VSV+DTV+LATVVA+ + KPGQDFFPLT Sbjct: 1 MFNKVSKTFQYGQQTVTMETGEIARQASGAVMVSVDDTVVLATVVAKDDVKPGQDFFPLT 60 Query: 61 VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV 120 VDYIEK+YAAGRIPG FFKREG+PSEKETLTSRLIDRPIRPLFPEGY NEVQVIIHVLSV Sbjct: 61 VDYIEKSYAAGRIPGSFFKREGRPSEKETLTSRLIDRPIRPLFPEGYFNEVQVIIHVLSV 120 Query: 121 NPEIDPDIPAMIGASAALSLAGIPFNGPVGAARVGYIDGQYVLNPTTSQLKSSQLDLVVA 180 NPE+DPDIP+MI ASAAL ++GIPFNGP+GAARVGYIDGQYVLNPT SQL S++DLVVA Sbjct: 121 NPEVDPDIPSMIAASAALCVSGIPFNGPLGAARVGYIDGQYVLNPTASQLPLSKMDLVVA 180 Query: 181 GTETAVLMVESEADQLSEEVMLGAVVFGHDQSKAVIEAIHALVREGGKPEVQWTAPAKNE 240 GTE AVLMVESEA++L E++MLGAVVFGH+Q K VI+AI LVR+GGKPEV+W PAKNE Sbjct: 181 GTEQAVLMVESEAEELPEDIMLGAVVFGHEQMKVVIDAIDELVRDGGKPEVEWAPPAKNE 240 Query: 241 ALIARVSQLAEGPLREAYQTKDKQARTEKLKAVSAQVNEALIAEAAANNGVAADAAEVGS 300 LIA V+++AE LR+AYQ + KQAR+ +L+ + V++ L AEA A D+ EVG+ Sbjct: 241 ELIAAVTRIAEPELRKAYQIRQKQARSTELRHIYDNVSKTLAAEAQDKGVSAPDSVEVGN 300 Query: 301 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIAT 360 I+FDLEAKIVRSQIL+GEPRIDGRDTRTVRPI+IRTGVLPRTHGSALFTRGETQALV+AT Sbjct: 301 IMFDLEAKIVRSQILDGEPRIDGRDTRTVRPITIRTGVLPRTHGSALFTRGETQALVVAT 360 Query: 361 LGTARDEQKIDGLLGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL 420 LGT+RD QKID L+GEYSD FM+HYNMPPFATGETGRVGTPKRREIGHGRLAKRALIA L Sbjct: 361 LGTSRDNQKIDALMGEYSDAFMMHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIACL 420 Query: 421 PAADEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNKF 480 P+ +EFSYS+RLVSEI ESNGSSSMASVCGG LALMDAGVP+K HVAGIAMGLIKEGNKF Sbjct: 421 PSQEEFSYSIRLVSEIMESNGSSSMASVCGGSLALMDAGVPVKNHVAGIAMGLIKEGNKF 480 Query: 481 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALEQAKEGRHHILG 540 AVLTDILGDEDHLGDMDFKVAGTANG+ ALQMDIKIQGITKEIMQVAL QA+EGR HIL Sbjct: 481 AVLTDILGDEDHLGDMDFKVAGTANGVNALQMDIKIQGITKEIMQVALAQAREGRMHILS 540 Query: 541 KMQEAVPAGRAELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV 600 KMQEA+P + ELSDFAPRLITI+INPEKIRDVIGKGGAVIR LTEETG QIDI+D+GVV Sbjct: 541 KMQEAMPQFKTELSDFAPRLITIRINPEKIRDVIGKGGAVIRGLTEETGAQIDITDDGVV 600 Query: 601 TIASVDASAGQEAKRRIEELTASVEVGKVYEGTVLKLLDFGAIVQVLPGKDGLLHISQIA 660 TIASVDA+AGQEAKRRIEELTASVEVGK+YEGTVLKLLDFGAIVQ+LPGKDGLLHISQIA Sbjct: 601 TIASVDAAAGQEAKRRIEELTASVEVGKIYEGTVLKLLDFGAIVQILPGKDGLLHISQIA 660 Query: 661 NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMK 695 +ERVNAV DYL+EGQ VRVKVLETDDRGR+KLSMK Sbjct: 661 SERVNAVTDYLEEGQAVRVKVLETDDRGRIKLSMK 695 >ref|YP_441610.1| polynucleotide phosphorylase/polyadenylase [Burkholderia thailandensis E264] ref|ZP_02373292.1| polynucleotide phosphorylase/polyadenylase [Burkholderia thailandensis TXDOH] ref|ZP_05587956.1| polynucleotide phosphorylase/polyadenylase [Burkholderia thailandensis E264] sp|Q2SZN9.1|PNP_BURTA RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gb|ABC36747.1| polyribonucleotide nucleotidyltransferase [Burkholderia thailandensis E264] Length = 713 Score = 1130 bits (2922), Expect = 0.0, Method: Compositional matrix adjust. Identities = 551/708 (77%), Positives = 618/708 (87%) Query: 1 VFNKVTKTFQYGQHQVTLETGEIARQASGAVVVSVEDTVILATVVARKEAKPGQDFFPLT 60 +FNK+ K FQ+GQH+V LETGEIARQASGAV+V VEDTV+LATVV K AKPGQDFFPLT Sbjct: 3 LFNKIVKEFQWGQHKVRLETGEIARQASGAVLVDVEDTVVLATVVGAKSAKPGQDFFPLT 62 Query: 61 VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV 120 VDYIEKTY+AG+IPGGFF+REG+PSE ETLTSRLIDRP+RPLFPEG+ NEVQV+IHVLSV Sbjct: 63 VDYIEKTYSAGKIPGGFFRREGRPSEHETLTSRLIDRPLRPLFPEGFYNEVQVVIHVLSV 122 Query: 121 NPEIDPDIPAMIGASAALSLAGIPFNGPVGAARVGYIDGQYVLNPTTSQLKSSQLDLVVA 180 NPE+ DIPA+IGASAAL+++G+PFNGPVGAARV Y++ +YVLNPT Q+K+S+LDLVVA Sbjct: 123 NPEVPADIPALIGASAALAVSGLPFNGPVGAARVAYVNNEYVLNPTREQIKASRLDLVVA 182 Query: 181 GTETAVLMVESEADQLSEEVMLGAVVFGHDQSKAVIEAIHALVREGGKPEVQWTAPAKNE 240 GTE AVLMVESEADQL E+VMLGAVVFGH+Q + I+AIH LVREGGKPE W K+E Sbjct: 183 GTERAVLMVESEADQLPEDVMLGAVVFGHEQMQTAIDAIHELVREGGKPEWDWQPAPKDE 242 Query: 241 ALIARVSQLAEGPLREAYQTKDKQARTEKLKAVSAQVNEALIAEAAANNGVAADAAEVGS 300 AL ARV++LA+ L AYQ +DKQAR+ KLK V A + L EA A VAAD A VG+ Sbjct: 243 ALNARVTELAQPELLAAYQIRDKQARSTKLKEVYAATSAKLEEEALAAGTVAADKATVGN 302 Query: 301 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIAT 360 ILFDLEAKIVR QIL GEPRIDGRDTRTVRPI IRTGVLPRTHGSALFTRGETQALV+AT Sbjct: 303 ILFDLEAKIVRGQILSGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVVAT 362 Query: 361 LGTARDEQKIDGLLGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL 420 LGT DEQ ID L GEY DRFMLHYNMPPFATGETGRVG+PKRREIGHGRLAKRAL+A L Sbjct: 363 LGTKGDEQIIDALEGEYRDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVACL 422 Query: 421 PAADEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNKF 480 P+ADEF YS+R+VSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLI EGNKF Sbjct: 423 PSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGNKF 482 Query: 481 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALEQAKEGRHHILG 540 AVLTDILGDEDHLGDMDFKVAGTA G+TALQMDIKIQGITKEIMQVAL QAKEGR HILG Sbjct: 483 AVLTDILGDEDHLGDMDFKVAGTAEGVTALQMDIKIQGITKEIMQVALAQAKEGRMHILG 542 Query: 541 KMQEAVPAGRAELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV 600 KM+EAV +LS+FAPR+ITIKINPEKIRDVIGKGG+VIRALTEETGT IDISD+GVV Sbjct: 543 KMKEAVAGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDGVV 602 Query: 601 TIASVDASAGQEAKRRIEELTASVEVGKVYEGTVLKLLDFGAIVQVLPGKDGLLHISQIA 660 TIAS ++ EAK+RIE +TA +EVG+VYEGTVLKLLDFGAIV +LPGKDGLLHIS+I Sbjct: 603 TIASTNSEGMAEAKKRIENITAEIEVGQVYEGTVLKLLDFGAIVNLLPGKDGLLHISEIV 662 Query: 661 NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQAEEGGEAAAP 708 NERV + DYLKEGQQV+VKV++TD++GR++LS KA E G+ P Sbjct: 663 NERVKDINDYLKEGQQVKVKVIQTDEKGRVRLSAKALLNEAAGQTDTP 710 >ref|ZP_02387158.1| polynucleotide phosphorylase/polyadenylase [Burkholderia thailandensis Bt4] Length = 713 Score = 1129 bits (2919), Expect = 0.0, Method: Compositional matrix adjust. Identities = 550/708 (77%), Positives = 618/708 (87%) Query: 1 VFNKVTKTFQYGQHQVTLETGEIARQASGAVVVSVEDTVILATVVARKEAKPGQDFFPLT 60 +FNK+ K FQ+GQH+V LETGEIARQASGAV+V VEDTV+LATVV K AKPGQDFFPLT Sbjct: 3 LFNKIVKEFQWGQHKVRLETGEIARQASGAVLVDVEDTVVLATVVGAKSAKPGQDFFPLT 62 Query: 61 VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV 120 VDYIEKTY+AG+IPGGFF+REG+PSE ETLTSRLIDRP+RPLFPEG+ NEVQV+IHVLSV Sbjct: 63 VDYIEKTYSAGKIPGGFFRREGRPSEHETLTSRLIDRPLRPLFPEGFYNEVQVVIHVLSV 122 Query: 121 NPEIDPDIPAMIGASAALSLAGIPFNGPVGAARVGYIDGQYVLNPTTSQLKSSQLDLVVA 180 NPE+ DIPA+IGASAAL+++G+PFNGPVGAARV Y++ +YVLNPT Q+K+S+LDLVVA Sbjct: 123 NPEVPADIPALIGASAALAVSGLPFNGPVGAARVAYVNNEYVLNPTREQIKASRLDLVVA 182 Query: 181 GTETAVLMVESEADQLSEEVMLGAVVFGHDQSKAVIEAIHALVREGGKPEVQWTAPAKNE 240 GTE AVLMVESEADQL E+VMLGAVVFGH+Q + I+AIH LVREGGKPE W K+E Sbjct: 183 GTERAVLMVESEADQLPEDVMLGAVVFGHEQMQTAIDAIHELVREGGKPEWDWQPAPKDE 242 Query: 241 ALIARVSQLAEGPLREAYQTKDKQARTEKLKAVSAQVNEALIAEAAANNGVAADAAEVGS 300 AL ARV++LA+ L AYQ +DKQAR+ KLK V A + L EA A V+AD A VG+ Sbjct: 243 ALNARVTELAQPELLAAYQIRDKQARSTKLKEVYAATSAKLEEEALAAGTVSADKATVGN 302 Query: 301 ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIAT 360 ILFDLEAKIVR QIL GEPRIDGRDTRTVRPI IRTGVLPRTHGSALFTRGETQALV+AT Sbjct: 303 ILFDLEAKIVRGQILSGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVVAT 362 Query: 361 LGTARDEQKIDGLLGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL 420 LGT DEQ ID L GEY DRFMLHYNMPPFATGETGRVG+PKRREIGHGRLAKRAL+A L Sbjct: 363 LGTKGDEQIIDALEGEYRDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVACL 422 Query: 421 PAADEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNKF 480 P+ADEF YS+R+VSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLI EGNKF Sbjct: 423 PSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGNKF 482 Query: 481 AVLTDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALEQAKEGRHHILG 540 AVLTDILGDEDHLGDMDFKVAGTA G+TALQMDIKIQGITKEIMQVAL QAKEGR HILG Sbjct: 483 AVLTDILGDEDHLGDMDFKVAGTAEGVTALQMDIKIQGITKEIMQVALAQAKEGRMHILG 542 Query: 541 KMQEAVPAGRAELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV 600 KM+EAV +LS+FAPR+ITIKINPEKIRDVIGKGG+VIRALTEETGT IDISD+GVV Sbjct: 543 KMKEAVAGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDGVV 602 Query: 601 TIASVDASAGQEAKRRIEELTASVEVGKVYEGTVLKLLDFGAIVQVLPGKDGLLHISQIA 660 TIAS ++ EAK+RIE +TA +EVG+VYEGTVLKLLDFGAIV +LPGKDGLLHIS+I Sbjct: 603 TIASTNSEGMAEAKKRIENITAEIEVGQVYEGTVLKLLDFGAIVNLLPGKDGLLHISEIV 662 Query: 661 NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQAEEGGEAAAP 708 NERV + DYLKEGQQV+VKV++TD++GR++LS KA E G+ P Sbjct: 663 NERVKDINDYLKEGQQVKVKVIQTDEKGRVRLSAKALLNEAAGQTDTP 710