BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0295.p         (168 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775163.1| hypothetical protein Hsero_1742 [Herbaspiril...   315   1e-84
ref|YP_003374790.1| hypothetical protein XALc_0259 [Xanthomonas ...   148   3e-34

>ref|YP_003775163.1| hypothetical protein Hsero_1742 [Herbaspirillum seropedicae SmR1]
 gb|ADJ63255.1| hypothetical protein Hsero_1742 [Herbaspirillum seropedicae SmR1]
          Length = 168

 Score =  315 bits (808), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 167/168 (99%), Positives = 168/168 (100%)

Query: 1   MDGMNMAIDTSSIPLGNLDPYGLPGNSASAGSSAVKAVNDPAAVAQAVELAAQASVVVSL 60
           MDGMNMAIDTSSIPLGNLDPYGLPGNSASAG+SAVKAVNDPAAVAQAVELAAQASVVVSL
Sbjct: 1   MDGMNMAIDTSSIPLGNLDPYGLPGNSASAGNSAVKAVNDPAAVAQAVELAAQASVVVSL 60

Query: 61  GGASSGNGALTYNAAGLFDAIVGAGSADGASPDLTQNQATQSYYQGILGSIVIPSSNDGV 120
           GGASSGNGALTYNAAGLFDAIVGAGSADGASPDLTQNQATQSYYQGILGSIVIPSSNDGV
Sbjct: 61  GGASSGNGALTYNAAGLFDAIVGAGSADGASPDLTQNQATQSYYQGILGSIVIPSSNDGV 120

Query: 121 YDGSGQFSGQALSSQLSLLLKSNPDLTGAIVEDIVNQGIVGGLISTTA 168
           YDGSGQFSGQALSSQLSLLLKSNPDLTGAIVEDIVNQGIVGGLISTTA
Sbjct: 121 YDGSGQFSGQALSSQLSLLLKSNPDLTGAIVEDIVNQGIVGGLISTTA 168


>ref|YP_003374790.1| hypothetical protein XALc_0259 [Xanthomonas albilineans GPE PC73]
 emb|CBA14803.1| hypothetical protein XALc_0259 [Xanthomonas albilineans]
          Length = 164

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/135 (62%), Positives = 99/135 (73%), Gaps = 1/135 (0%)

Query: 35  VKAVNDPAAVAQAVELAAQASVVVSLGGASSGNGALTYNAAGLFDAIVGAGSADGASPDL 94
           V+A ND AAV QAV L++ ASV++SLG +S     LTY AAGLF+ IV AGSADG SPDL
Sbjct: 30  VQASNDTAAVQQAVSLSSDASVILSLGTSSPAEQGLTYTAAGLFNTIVSAGSADGTSPDL 89

Query: 95  TQNQATQSYYQGILGSIVIPSSNDGVYDGSGQFSGQ-ALSSQLSLLLKSNPDLTGAIVED 153
            QNQA QSY QGIL  I  P S  G+Y+ SG F+GQ  L+  LS  LK NP+LTG +V D
Sbjct: 90  NQNQANQSYSQGILDGIGNPPSTPGIYNASGVFTGQNTLTPALSSALKENPNLTGTVVGD 149

Query: 154 IVNQGIVGGLISTTA 168
           ++NQGIVGGLISTTA
Sbjct: 150 LLNQGIVGGLISTTA 164