BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0273.p (256 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777202.1| 3-oxoacyl-(acyl-carrier-protein) reductase [... 519 e-145 ref|YP_001566660.1| short-chain dehydrogenase/reductase SDR [Del... 331 7e-89 ref|YP_001811916.1| short-chain dehydrogenase/reductase SDR [Bur... 321 6e-86 ref|YP_003911142.1| short-chain dehydrogenase/reductase SDR [Bur... 301 7e-80 ref|ZP_03500877.1| short-chain dehydrogenase/reductase SDR [Rhiz... 299 3e-79 ref|YP_001267180.1| short-chain dehydrogenase/reductase SDR [Pse... 280 1e-73 ref|YP_001861068.1| short-chain dehydrogenase/reductase SDR [Bur... 279 3e-73 ref|XP_002945009.1| PREDICTED: uncharacterized short-chain type ... 254 8e-66 ref|ZP_01058298.1| 3-oxoacyl-[acyl-carrier protein] reductase [R... 229 3e-58 ref|YP_002498654.1| short-chain dehydrogenase/reductase SDR [Met... 223 2e-56 >ref|YP_003777202.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Herbaspirillum seropedicae SmR1] gb|ADJ65294.1| 3-oxoacyl-(acyl-carrier-protein) reductase protein [Herbaspirillum seropedicae SmR1] Length = 256 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 254/256 (99%), Positives = 255/256 (99%) Query: 1 MNRNDSGARVALVTGGAMGIGASISQQLAAKGHTVLVADINLDAASKTADALVAAGHRAA 60 MNRNDSGARVALVTGGAMGIGASISQQLAAKGHTVLVADINLDAASKTADALVAAGHRAA Sbjct: 1 MNRNDSGARVALVTGGAMGIGASISQQLAAKGHTVLVADINLDAASKTADALVAAGHRAA 60 Query: 61 PLQMDLGSPESIAAAFVHIEKDYGRCDVLVNNAGVARTYSFLDYPLENWLQTMNVNVTGV 120 PLQMDLGSPESIAAAF HIEKDYGRCDVLVNNAGVARTYSFLDYPLENWLQTMNVNVTGV Sbjct: 61 PLQMDLGSPESIAAAFAHIEKDYGRCDVLVNNAGVARTYSFLDYPLENWLQTMNVNVTGV 120 Query: 121 LLAGQHAARLMVKQQWGRIVNISSISGIRAGAGRTAYGTSKAAVIGLTRQMAIELAQYGV 180 LLAGQHAARLMVKQQWGRIVNISSISGIRAGAGRTAYGTSKAAVIGLTRQMAIELAQYG+ Sbjct: 121 LLAGQHAARLMVKQQWGRIVNISSISGIRAGAGRTAYGTSKAAVIGLTRQMAIELAQYGI 180 Query: 181 TVNSVAPGPVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGH 240 TVNSVAPGPVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGH Sbjct: 181 TVNSVAPGPVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGH 240 Query: 241 VIPVDGGFVAGGVLEI 256 VIPVDGGFVAGGVLEI Sbjct: 241 VIPVDGGFVAGGVLEI 256 >ref|YP_001566660.1| short-chain dehydrogenase/reductase SDR [Delftia acidovorans SPH-1] ref|XP_002536339.1| 3-oxoacyl-[acyl-carrier-protein] reductase, putative [Ricinus communis] gb|ABX38275.1| short-chain dehydrogenase/reductase SDR [Delftia acidovorans SPH-1] gb|EEF26043.1| 3-oxoacyl-[acyl-carrier-protein] reductase, putative [Ricinus communis] Length = 256 Score = 331 bits (848), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 157/248 (63%), Positives = 202/248 (81%), Gaps = 1/248 (0%) Query: 6 SGARVALVTGGAMGIGASISQQLAAKGHTVLVADINLDAASKTADALVAAGHRAAPLQMD 65 S +RVALVTGGA GIGA + +LA GH VLVAD+++DAA+ TA L AAG RA L++D Sbjct: 5 SESRVALVTGGAKGIGAEVCARLAVLGHHVLVADLDVDAATATALELSAAGGRATALRLD 64 Query: 66 LGSPESIAAAFVHIEKDYGRCDVLVNNAGVARTYSFLDYPLENWLQTMNVNVTGVLLAGQ 125 +G PE+IA AF +E+++GRCD+LVN+AG+A+ + F+D+PL+N++ TMNVNVTG LL Q Sbjct: 65 VGKPEAIATAFEQVEREHGRCDILVNSAGIAKVFPFIDFPLDNFVATMNVNVTGTLLCAQ 124 Query: 126 HAARLMVKQQWGRIVNISSISGIRA-GAGRTAYGTSKAAVIGLTRQMAIELAQYGVTVNS 184 AARLMVKQ WGRIVNI+S++G+RA G+GRTAYGTSK AVI LTRQMA+ELA++G+T N+ Sbjct: 125 AAARLMVKQGWGRIVNIASVAGMRAVGSGRTAYGTSKGAVIALTRQMAVELAEHGITANA 184 Query: 185 VAPGPVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGHVIPV 244 VAPGPVDTPMTQA+H+ Q R Y + +PM RYGT EIASAV YL +E++ Y+TG +PV Sbjct: 185 VAPGPVDTPMTQALHTAQFRAEYSKAIPMNRYGTCGEIASAVTYLVSEDARYVTGIAMPV 244 Query: 245 DGGFVAGG 252 DGGF+A G Sbjct: 245 DGGFLASG 252 >ref|YP_001811916.1| short-chain dehydrogenase/reductase SDR [Burkholderia ambifaria MC40-6] gb|ACB67700.1| short-chain dehydrogenase/reductase SDR [Burkholderia ambifaria MC40-6] Length = 259 Score = 321 bits (823), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 153/253 (60%), Positives = 199/253 (78%), Gaps = 2/253 (0%) Query: 1 MNRNDSGARVALVTGGAMGIGASISQQLAAKGHTVLVADINLDAASKTADALVAAGHRAA 60 M ++D+ +RVA+VTGGAMGIGA ++QLA +G+ V++ADIN AA + A AG + Sbjct: 4 MKQSDA-SRVAVVTGGAMGIGADSAEQLAKRGYHVVLADINKSAAEEAASRFQRAGLSVS 62 Query: 61 PLQMDLGSPESIAAAFVHIEKDYGRCDVLVNNAGVARTYSFLDYPLENWLQTMNVNVTGV 120 ++MD+ + ESIAAAF ++K +GRCDVLVN AG+A+ F+DYPL+ +L+TM VNVTG Sbjct: 63 AIEMDVSNSESIAAAFGELDKRHGRCDVLVNGAGIAKLVPFIDYPLDTFLKTMQVNVTGA 122 Query: 121 LLAGQHAARLMVKQQWGRIVNISSISGIRA-GAGRTAYGTSKAAVIGLTRQMAIELAQYG 179 L QHAARLMVK +WGRI+NI+S++G+RA G GRTAYGTSK AVI LTRQMA+EL YG Sbjct: 123 FLCSQHAARLMVKNRWGRIINIASVAGMRAVGKGRTAYGTSKGAVIALTRQMAVELCDYG 182 Query: 180 VTVNSVAPGPVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITG 239 +T N++APGPVDTPMT+A+HSE+ R Y +PM+RYGTT EIA+AVCYLA+EE+ Y G Sbjct: 183 ITANAIAPGPVDTPMTKALHSEEFRAEYSNAIPMKRYGTTSEIAAAVCYLASEEAGYTNG 242 Query: 240 HVIPVDGGFVAGG 252 V+PVDGGF+A G Sbjct: 243 IVLPVDGGFLAWG 255 >ref|YP_003911142.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1003] gb|ADN61851.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1003] Length = 266 Score = 301 bits (770), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 150/248 (60%), Positives = 190/248 (76%) Query: 9 RVALVTGGAMGIGASISQQLAAKGHTVLVADINLDAASKTADALVAAGHRAAPLQMDLGS 68 RVALVTGG GIGA+ISQQLA GH V + DIN +A+ A +L AAG +A +++D+ Sbjct: 19 RVALVTGGGAGIGAAISQQLADAGHIVFIGDINTHSANDLAGSLCAAGRKAYAVRLDVSD 78 Query: 69 PESIAAAFVHIEKDYGRCDVLVNNAGVARTYSFLDYPLENWLQTMNVNVTGVLLAGQHAA 128 SI AF I+ +GRCD+LVNNAG+A+T+ F+DYP+E+W + +VNVTG +L GQ AA Sbjct: 79 ASSIDEAFSAIDAQFGRCDILVNNAGIAKTFPFIDYPVEHWRKVFDVNVTGPMLCGQRAA 138 Query: 129 RLMVKQQWGRIVNISSISGIRAGAGRTAYGTSKAAVIGLTRQMAIELAQYGVTVNSVAPG 188 RLM + WGRIVNI+S+SG+RA GRTAYGTSKAAVIGLTRQMAIELA+YG+T N +APG Sbjct: 139 RLMRRAGWGRIVNIASVSGLRASMGRTAYGTSKAAVIGLTRQMAIELAEYGITTNGIAPG 198 Query: 189 PVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGHVIPVDGGF 248 PVDTPMT +HS+ R++Y R VP RYG DEIAS V +L +E ++Y+ G +PVDGGF Sbjct: 199 PVDTPMTLDLHSQVARDNYTRAVPAGRYGVPDEIASVVAFLCSERASYVNGQTLPVDGGF 258 Query: 249 VAGGVLEI 256 +A GVLEI Sbjct: 259 MAAGVLEI 266 >ref|ZP_03500877.1| short-chain dehydrogenase/reductase SDR [Rhizobium etli Kim 5] Length = 236 Score = 299 bits (765), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 142/233 (60%), Positives = 182/233 (78%), Gaps = 1/233 (0%) Query: 23 SISQQLAAKGHTVLVADINLDAASKTADALVAAGHRAAPLQMDLGSPESIAAAFVHIEKD 82 SI+ LA+ G V+VADIN +AA K AD L A G RAA + MD+G P+SIA AF +EK+ Sbjct: 2 SIAHHLASDGFAVIVADINKEAAEKAADELKAVGLRAAYVPMDVGRPDSIAEAFSTVEKE 61 Query: 83 YGRCDVLVNNAGVARTYSFLDYPLENWLQTMNVNVTGVLLAGQHAARLMVKQQWGRIVNI 142 +GRCDVLVNNAG+A+T+ F+D+P +NW+ T+N+NVTG +L QHAARLM + WGRI+NI Sbjct: 62 HGRCDVLVNNAGIAKTFPFIDFPYDNWVATININVTGSMLCSQHAARLMRQSGWGRIINI 121 Query: 143 SSISGIRA-GAGRTAYGTSKAAVIGLTRQMAIELAQYGVTVNSVAPGPVDTPMTQAMHSE 201 +S++G RA G GRTAYG SKAAVIGLTRQMA ELA YG+T N+VAPGPVDTP+T+A+HS Sbjct: 122 ASVAGERAVGHGRTAYGVSKAAVIGLTRQMAAELAAYGITSNAVAPGPVDTPLTEALHSA 181 Query: 202 QTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGHVIPVDGGFVAGGVL 254 + R +Y +P RRYG EIA+ V +LA+E ++Y+ G VIPVDGGF+A G L Sbjct: 182 EFRATYTAAIPARRYGKPGEIAATVSFLASEGASYVNGAVIPVDGGFLAAGAL 234 >ref|YP_001267180.1| short-chain dehydrogenase/reductase SDR [Pseudomonas putida F1] gb|ABQ77996.1| short-chain dehydrogenase/reductase SDR [Pseudomonas putida F1] Length = 255 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 134/245 (54%), Positives = 187/245 (76%), Gaps = 1/245 (0%) Query: 9 RVALVTGGAMGIGASISQQLAAKGHTVLVADINLDAASKTADALVAAGHRAAPLQMDLGS 68 ++A+VTGGAMGIGA + LA GH V++ DIN+DAA + + L A G A Q+D+ S Sbjct: 7 KIAVVTGGAMGIGAEAAVSLAKDGHHVVICDINVDAAEQFSRQLRAEGFTADACQVDVAS 66 Query: 69 PESIAAAFVHIEKDYGRCDVLVNNAGVARTYSFLDYPLENWLQTMNVNVTGVLLAGQHAA 128 ES+ AF I+ ++GRCDVLVN+AG+A+T FL++ L+ + +TM++NVTG + Q AA Sbjct: 67 VESVRDAFSWIDSEFGRCDVLVNSAGIAKTMPFLEFDLDVFNKTMHINVTGTFMCCQLAA 126 Query: 129 RLMVKQQWGRIVNISSISGIRA-GAGRTAYGTSKAAVIGLTRQMAIELAQYGVTVNSVAP 187 ++M K +GRI+NI+S++G+RA G GRTAYGTSK AVI LTRQMA+EL++YG+T N++AP Sbjct: 127 QIMRKNGFGRIINIASVAGMRAVGKGRTAYGTSKGAVIALTRQMAVELSEYGITANAIAP 186 Query: 188 GPVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGHVIPVDGG 247 GPVDTPMT+ +HS+ R++Y +P +RYGTT EIA AV YLA++ +AY+ G V+PVDGG Sbjct: 187 GPVDTPMTKELHSDTFRQAYSNAIPAKRYGTTQEIAGAVSYLASDVAAYVNGVVLPVDGG 246 Query: 248 FVAGG 252 F+A G Sbjct: 247 FLAWG 251 >ref|YP_001861068.1| short-chain dehydrogenase/reductase SDR [Burkholderia phymatum STM815] gb|ACC74022.1| short-chain dehydrogenase/reductase SDR [Burkholderia phymatum STM815] Length = 267 Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 136/252 (53%), Positives = 189/252 (75%) Query: 4 NDSGARVALVTGGAMGIGASISQQLAAKGHTVLVADINLDAASKTADALVAAGHRAAPLQ 63 + + RVA+VTG A GIGA+I ++LA G TV+VAD+NL AA +TA + A G A P+Q Sbjct: 15 SQTAGRVAVVTGAAGGIGAAIVRRLADDGFTVIVADLNLAAAEETAHQMSARGLSAIPMQ 74 Query: 64 MDLGSPESIAAAFVHIEKDYGRCDVLVNNAGVARTYSFLDYPLENWLQTMNVNVTGVLLA 123 +D+G ESI F + + RCDVLVNNAG+A+T+ F + PL++W M +N+TG LL Sbjct: 75 LDVGKSESIDEFFALVGNQFERCDVLVNNAGIAKTFPFEEVPLDHWRSLMEINLTGPLLL 134 Query: 124 GQHAARLMVKQQWGRIVNISSISGIRAGAGRTAYGTSKAAVIGLTRQMAIELAQYGVTVN 183 Q A R MVK++WGR++NI+S++GIRA GRT YGTSKAAV+GLTRQ+A+E A++G+T N Sbjct: 135 TQQAVRFMVKRKWGRVINIASVAGIRASVGRTGYGTSKAAVMGLTRQVAVEYAEHGITAN 194 Query: 184 SVAPGPVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGHVIP 243 +VAPGP++TPM A+HS R+++ R VPMRRYGT DE+A V +LA++ ++Y+TG I Sbjct: 195 AVAPGPIETPMATALHSAAQRDAFMRHVPMRRYGTPDEVAGVVSFLASDSASYVTGQTIS 254 Query: 244 VDGGFVAGGVLE 255 VDGGFVA G+++ Sbjct: 255 VDGGFVAAGLID 266 >ref|XP_002945009.1| PREDICTED: uncharacterized short-chain type dehydrogenase/reductase y4vI-like [Xenopus (Silurana) tropicalis] Length = 273 Score = 254 bits (649), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 129/255 (50%), Positives = 177/255 (69%), Gaps = 1/255 (0%) Query: 1 MNRNDSGARVALVTGGAMGIGASISQQLAAKG-HTVLVADINLDAASKTADALVAAGHRA 59 MN+ +R++LVTG A GIG SI+++LA +G TV V D N A A +++ G +A Sbjct: 1 MNQRQHSSRISLVTGAASGIGRSIAERLALEGGATVCVVDCNEAGAQAAAASIMEEGGKA 60 Query: 60 APLQMDLGSPESIAAAFVHIEKDYGRCDVLVNNAGVARTYSFLDYPLENWLQTMNVNVTG 119 DLG +++ + I++ G D++VNNAG+A+T S LD+ L W TM +NVT Sbjct: 61 HAFVADLGDSQAVLSTLRQIDEHIGSPDIVVNNAGIAQTASVLDHSLPQWQLTMAINVTA 120 Query: 120 VLLAGQHAARLMVKQQWGRIVNISSISGIRAGAGRTAYGTSKAAVIGLTRQMAIELAQYG 179 LL QHA R M + WGRIVN++SISG+RAG+GR AYGTSKAA++ +TRQ AIE A++G Sbjct: 121 PLLIAQHALRAMKAKGWGRIVNVASISGVRAGSGRLAYGTSKAALLAMTRQFAIEAAEWG 180 Query: 180 VTVNSVAPGPVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITG 239 VTVN+VAPGPV+TP+ + +H T ++Y RLVPMRRYG DEIA AV +LA+E + YITG Sbjct: 181 VTVNAVAPGPVETPLIKQLHGGDTADTYARLVPMRRYGQPDEIAHAVAFLASEGAGYITG 240 Query: 240 HVIPVDGGFVAGGVL 254 + +DGGF+A G+ Sbjct: 241 DTLVIDGGFLASGLF 255 >ref|ZP_01058298.1| 3-oxoacyl-[acyl-carrier protein] reductase [Roseobacter sp. MED193] gb|EAQ43830.1| 3-oxoacyl-[acyl-carrier protein] reductase [Roseobacter sp. MED193] Length = 266 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 119/255 (46%), Positives = 174/255 (68%), Gaps = 4/255 (1%) Query: 2 NRNDSGARVALVTGGAMGIGASISQQLAAKGHTVLVADINLDAASKTADALVAAGHRAAP 61 +R+D G VALVTG GIG I+ +LA G V+V DI + T + AAG A Sbjct: 3 DRDDFG--VALVTGAGSGIGQGIALRLAELGARVVVTDIAETGIADTVKQIEAAGGTALG 60 Query: 62 LQMDLGSPESIAAAFVHIEKDYGRC-DVLVNNAGVARTYSFLDYPLENWLQTMNVNVTGV 120 ++D+ P S+ AAF E+ + +C DVLVNNAG+ FLD+PLE+W + M +N+TG Sbjct: 61 QKLDVSDPASVNAAFDETER-WDKCVDVLVNNAGIVGINPFLDFPLEDWNRVMAINLTGS 119 Query: 121 LLAGQHAARLMVKQQWGRIVNISSISGIRAGAGRTAYGTSKAAVIGLTRQMAIELAQYGV 180 +L Q AAR MV+Q++GRI+NI+S+SGIRAG GRTAYGTSKAA++GLTRQ+A+E+A +GV Sbjct: 120 MLCAQLAAREMVRQRYGRIINITSVSGIRAGVGRTAYGTSKAALVGLTRQIALEVAAHGV 179 Query: 181 TVNSVAPGPVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGH 240 T N++APG + TP+T++ ++E+T ++P +IA+AV YL + ++ Y+ G Sbjct: 180 TANAIAPGAITTPLTESTYTEETVARLLPMIPAGYMADPADIAAAVAYLGSPDARYVNGE 239 Query: 241 VIPVDGGFVAGGVLE 255 + VDGG+V GG+++ Sbjct: 240 TLVVDGGYVCGGMMQ 254 >ref|YP_002498654.1| short-chain dehydrogenase/reductase SDR [Methylobacterium nodulans ORS 2060] gb|ACL58351.1| short-chain dehydrogenase/reductase SDR [Methylobacterium nodulans ORS 2060] Length = 262 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 115/254 (45%), Positives = 167/254 (65%), Gaps = 1/254 (0%) Query: 1 MNRNDSGARVALVTGGAMGIGASISQQLAAKGHTVLVADINLDAASKTADALVAAGHRAA 60 MN+ +G +VALVTG A GIG +I++ A +G +V++AD+N +A + A L+ G RA Sbjct: 1 MNQRLAG-KVALVTGSARGIGLAIARAFAREGASVVIADVNEASAEEAASGLLREGGRAM 59 Query: 61 PLQMDLGSPESIAAAFVHIEKDYGRCDVLVNNAGVARTYSFLDYPLENWLQTMNVNVTGV 120 + +D+ P SIA I + +GR D+LVNNAGV FL+ L +W + + +N+TG Sbjct: 60 AVAVDVADPTSIAGMMEAILRRHGRLDILVNNAGVGGNTPFLETSLADWNRIIGINLTGA 119 Query: 121 LLAGQHAARLMVKQQWGRIVNISSISGIRAGAGRTAYGTSKAAVIGLTRQMAIELAQYGV 180 L Q AR MV+ G+IVNI+S+SG R G GR AYG +KA + LT+ MA+ELA++ + Sbjct: 120 FLVAQACAREMVRVGGGKIVNIASLSGQRGGNGRAAYGAAKAGLELLTKVMAVELAEHNI 179 Query: 181 TVNSVAPGPVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGH 240 VN++APG ++T M + H E TR +Y L+PM RYGT +EIA A +L ++ES Y+ GH Sbjct: 180 NVNNIAPGAIETEMAKFAHDEATRAAYNYLIPMTRYGTPEEIADAAVFLCSDESRYVHGH 239 Query: 241 VIPVDGGFVAGGVL 254 + VDGGF A G++ Sbjct: 240 TLNVDGGFRAAGLM 253