BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0237.p (598 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775130.1| hypothetical protein Hsero_1709 [Herbaspiril... 1214 0.0 ref|YP_003774788.1| hypothetical protein Hsero_1364 [Herbaspiril... 608 e-171 ref|YP_003375709.1| hypothetical protein XALc_1211 [Xanthomonas ... 546 e-153 ref|NP_637143.1| hypothetical protein XCC1777 [Xanthomonas campe... 523 e-146 ref|YP_363556.1| putative phosphodiesterase [Xanthomonas campest... 519 e-145 ref|ZP_08184377.1| diguanylate cyclase/phosphodiesterase with GA... 517 e-144 ref|YP_004851392.1| EAL domain-containing protein [Xanthomonas a... 516 e-144 ref|ZP_06729511.1| conserved hypothetical protein [Xanthomonas f... 515 e-143 ref|ZP_08186388.1| diguanylate cyclase/phosphodiesterase with GA... 515 e-143 ref|NP_642122.1| hypothetical protein XAC1795 [Xanthomonas axono... 514 e-143 >ref|YP_003775130.1| hypothetical protein Hsero_1709 [Herbaspirillum seropedicae SmR1] gb|ADJ63222.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 598 Score = 1214 bits (3141), Expect = 0.0, Method: Compositional matrix adjust. Identities = 595/598 (99%), Positives = 597/598 (99%) Query: 1 VLLEKEDNTEVEAAVRQESQRLAQLHGYCVLDTPPDKLCDQVTQLACSMFDVEIALVALV 60 +LLEKEDNTEVEAAVRQESQRLAQLHGYC LDTPPDKLCDQVTQLACSMFDVEIALVALV Sbjct: 1 MLLEKEDNTEVEAAVRQESQRLAQLHGYCALDTPPDKLCDQVTQLACSMFDVEIALVALV 60 Query: 61 DEHRQWFKSRVGLEVSETPRADSFCNHAIQTRHGMVVTDALQDARFSRHALVTGAPFIRF 120 DEHRQWFKSRVGLEVSETPRADSFCNHAIQTRHGMVVTDALQDARFSRHALVTGAPFIRF Sbjct: 61 DEHRQWFKSRVGLEVSETPRADSFCNHAIQTRHGMVVTDALQDARFSRHALVTGAPFIRF 120 Query: 121 YAGAPLVTPQGLSLGTLCIIDSRPRPDFGASQFAQLNQLAAIVMERLEQLRNRGYIDHVT 180 YAGAPLVTPQGLSLGTLCIIDSRPRPDFGASQFAQLNQLAAIVMERLEQLRNRGYIDHVT Sbjct: 121 YAGAPLVTPQGLSLGTLCIIDSRPRPDFGASQFAQLNQLAAIVMERLEQLRNRGYIDHVT 180 Query: 181 ALPNRARLMEVLRVRGHARPGASGADAAVAVDVCPREYLFDMVKALGWDYAEGFLMEVSR 240 ALPNRARLMEVLRVRGHARPGASGADAAVAVD+CPREYLFDMVKALGWDYAEGFLMEVSR Sbjct: 181 ALPNRARLMEVLRVRGHARPGASGADAAVAVDICPREYLFDMVKALGWDYAEGFLMEVSR 240 Query: 241 TLRRVLGTLPLYRVTTTTFVYLDETAPAQRRRRIADIEQRFTPALEFQGIPHLLDIAIGV 300 TLRRVLGTLPLYRVTTTTFVYLDETAPAQRRRRIADIEQRFTPALEFQGIPHLLDIAIGV Sbjct: 241 TLRRVLGTLPLYRVTTTTFVYLDETAPAQRRRRIADIEQRFTPALEFQGIPHLLDIAIGV 300 Query: 301 LPMEEDVSGGDVVRSLLTVIDVSREEGVSPRLFESVHAEKQRYAFWLLAALPMALTTPDE 360 LPMEEDVSGGDVVRSLLTVIDVSREEGVSPRLFESVHAEKQRYAFWLLAALPMALTTPDE Sbjct: 301 LPMEEDVSGGDVVRSLLTVIDVSREEGVSPRLFESVHAEKQRYAFWLLAALPMALTTPDE 360 Query: 361 LVLHFQPKVRLRDGACVGVEALIRWHHPIHGNIPPDVFIPLAEKTGQIRQVTAWVLRQVV 420 LVLHFQPKVRLRDGACVGVEALIRWHHPIHGNIPPDVFIPLAEKTGQIRQVTAWVLRQVV Sbjct: 361 LVLHFQPKVRLRDGACVGVEALIRWHHPIHGNIPPDVFIPLAEKTGQIRQVTAWVLRQVV 420 Query: 421 AQVARWLKSGRALPVAFNASARDFDSDELRELLAQQLKLHKVPPALIEIEFTEHAMANHP 480 AQVARWLKSGRALPVAFNASARDFDSDELRELLAQQLKLHKVPPALIEIEFTEHAMANHP Sbjct: 421 AQVARWLKSGRALPVAFNASARDFDSDELRELLAQQLKLHKVPPALIEIEFTEHAMANHP 480 Query: 481 QQVRQRVQALRELGVKVAIDDFGAGFSNLSYLKNIPADTMKIDRSFIHRLLDDEADQLIV 540 QQVRQRVQALRELGVKVAIDDFGAGFSNLSYLKNIPADTMKIDRSFIHRLLDDEADQLIV Sbjct: 481 QQVRQRVQALRELGVKVAIDDFGAGFSNLSYLKNIPADTMKIDRSFIHRLLDDEADQLIV 540 Query: 541 PSILHLAHNLGFSVVAEGLESERTATLLRHLGCDYGQGYAIARPMPLAELEAWLERRG 598 PSILHLAHNLGFSVVAEGLESERTATLLRHLGCDYGQGYAIARPMPLAELEAWLERRG Sbjct: 541 PSILHLAHNLGFSVVAEGLESERTATLLRHLGCDYGQGYAIARPMPLAELEAWLERRG 598 >ref|YP_003774788.1| hypothetical protein Hsero_1364 [Herbaspirillum seropedicae SmR1] gb|ADJ62880.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 606 Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust. Identities = 316/588 (53%), Positives = 411/588 (69%), Gaps = 12/588 (2%) Query: 18 ESQRLAQLHGYCVLDTPPDKLCDQVTQLACSMFDVEIALVALVDEHRQWFKSRVGLEVSE 77 E QRLA L YC+LDT PD LCD +T+LA +FDVEIALV+LV EHRQWFKSR GL+ Sbjct: 22 EQQRLAVLDAYCLLDTQPDPLCDMITELATRLFDVEIALVSLVAEHRQWFKSRRGLDAPG 81 Query: 78 TPRADSFCNHAIQTRHGMVVTDALQDARFSRHALVTGAPFIRFYAGAPLVTPQGLSLGTL 137 TPR+ SFC HAI MV+ DA QD RF+ + LV G P IRFYAGA L T G++LGTL Sbjct: 82 TPRSQSFCAHAIVQAQTMVIPDARQDERFAGNPLVLGEPGIRFYAGAALRTADGVALGTL 141 Query: 138 CIIDSRPRPDFGASQFAQLNQLAAIVMERLEQLRNRGYIDHVTALPNRARLM-EVLRVRG 196 C+I PR F +L +LAAIVM RL+ LR Y+D +T+LPNR+RL+ +V ++ Sbjct: 142 CLIGKSPRSQFSEVDQDRLERLAAIVMARLDMLRMGSYVDSLTSLPNRSRLVADVQLMQA 201 Query: 197 HARPGASGAD------AAVAVDVCPREYLFDMVKALGWDYAEGFLMEVSRTLRRVLGTLP 250 HA G +G D AAVAVDVC YL DMVKALGWDY EGFL++ L + LG + Sbjct: 202 HA-TGLAGLDELPRRLAAVAVDVCDHTYLTDMVKALGWDYVEGFLIQAKERLCQALGEMA 260 Query: 251 LYRVTTTTFVYLDETAPAQRRRRIAD-IEQRFTPALEFQGIPHLLDIAIGVLPMEEDVSG 309 LYR+ T+F YLD R + AD I Q F +E QGIPH L++++G++P+ + Sbjct: 261 LYRIGATSFAYLDRC---DRWQDQADRIRQAFAATVEHQGIPHHLEVSVGIVPLSQCPDA 317 Query: 310 GDVVRSLLTVIDVSREEGVSPRLFESVHAEKQRYAFWLLAALPMALTTPDELVLHFQPKV 369 ++V SLLT DV+R +G +E + Q+++F LL+++P AL + D+L L FQPKV Sbjct: 318 AELVPSLLTAADVARADGHLQCQYEQPLGQMQKHSFELLSSIPAALLSTDQLWLEFQPKV 377 Query: 370 RLRDGACVGVEALIRWHHPIHGNIPPDVFIPLAEKTGQIRQVTAWVLRQVVAQVARWLKS 429 L G C GVEAL+RW HPIHG I P +FIPLAEKT IRQVT WVL++ + Q W + Sbjct: 378 SLSTGRCAGVEALLRWRHPIHGVISPALFIPLAEKTALIRQVTLWVLQRGIEQATAWARR 437 Query: 430 GRALPVAFNASARDFDSDELRELLAQQLKLHKVPPALIEIEFTEHAMANHPQQVRQRVQA 489 G A+PVA N SARDFD+D+L +LL + L+ H++P LIEIEFTE AM+ +P+++ R+Q Sbjct: 438 GVAIPVAINVSARDFDNDDLLQLLGRLLEQHRIPAGLIEIEFTESAMSRNPEKLYGRIQE 497 Query: 490 LRELGVKVAIDDFGAGFSNLSYLKNIPADTMKIDRSFIHRLLDDEADQLIVPSILHLAHN 549 ++ LGVKVAIDDFGAGFSNLSYLK+IPAD +K+D+SFI R+ D +DQ IVPS++HL Sbjct: 498 IKRLGVKVAIDDFGAGFSNLSYLKHIPADYLKLDQSFILRMESDYSDQQIVPSMIHLGQR 557 Query: 550 LGFSVVAEGLESERTATLLRHLGCDYGQGYAIARPMPLAELEAWLERR 597 LGF+VVAEG+E+E+T +L+HLGCD+GQG+ IARPM A+ W+ R Sbjct: 558 LGFAVVAEGVENEKTRRILQHLGCDFGQGFGIARPMNAADCWDWIGAR 605 >ref|YP_003375709.1| hypothetical protein XALc_1211 [Xanthomonas albilineans GPE PC73] emb|CBA15721.1| hypothetical protein XALc_1211 [Xanthomonas albilineans] Length = 595 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 285/585 (48%), Positives = 381/585 (65%), Gaps = 16/585 (2%) Query: 18 ESQRLAQLHGYCVLDTPPDKLCDQVTQLACSMFDVEIALVALVDEHRQWFKSRVGLEVSE 77 E RL L C+LDTP D + D +TQLA V IA+V+LVDE RQWFKS++G++ +E Sbjct: 12 EPTRLNVLQQLCLLDTPADLVFDLITQLAARHLKVPIAMVSLVDERRQWFKSKIGVDTAE 71 Query: 78 TPRADSFCNHAIQTRHGMVVTDALQDARFSRHALVTGAPFIRFYAGAPLVTPQGLSLGTL 137 TPR+ +FC + IQ+ +VV DA +D RF ALVTG PF+RFYAGAPL+ G +LG L Sbjct: 72 TPRSQAFCAYTIQSTELLVVLDAREDPRFRDSALVTGPPFVRFYAGAPLLMADGANLGAL 131 Query: 138 CIIDSRPRPDFGASQFAQLNQLAAIVMERLEQLRNRGYIDHVTALPNRARLMEVLRVRGH 197 C++D+ PR DF S L L I+M R++ LRN G+ID +T LPNR R E L + Sbjct: 132 CVVDTEPRQDFDESSRKTLEDLRDILMIRIDALRNAGFIDPLTQLPNRLRFNEDLTMWLS 191 Query: 198 ARPGASGADAAVAVDVCPREYLFDMVKALGWDYAEGFLMEVSRTLRRVLGTLPLYRVTTT 257 + G + AVAVDVC +Y +MVKALGW+YAEG+L+ L + L +PLYR+ TT Sbjct: 192 LQ-GTQQHNTAVAVDVCGTKYFREMVKALGWEYAEGYLLSSRDRLVQALDGIPLYRIDTT 250 Query: 258 TFVYL----DETAPAQRRRRIADIEQRFTPALEFQGIPHLLDIAIGVLPMEEDVSGGDVV 313 TFV++ DE AQ R+ D FT A+E QGIPH+ ++G + ++ +S + Sbjct: 251 TFVFVIEGSDEDKLAQWCDRVCDA---FTLAIEHQGIPHVATPSLGAVYLDGGLSANHTL 307 Query: 314 RSLLTVIDVSREEGVSPRLFESVHAEKQRYAFWLLAALPMALTTPDELVLHFQPKVRLRD 373 RSL T +D++R+ G+ L+E H QR AF +LAALP AL+ +L LH+QP+V + Sbjct: 308 RSLTTAVDMARQRGLRWSLYELSHDANQRSAFRILAALPEALSAHGQLSLHYQPRVSMHS 367 Query: 374 GACVGVEALIRWHHPIHGNIPPDVFIPLAEKTGQIRQVTAWVLRQVVAQVARWLKSGRAL 433 GAC GVEAL+RW HP+ G + P+ FIPLAEKT + Q+TAWVL+ +AQ A W + G Sbjct: 368 GACTGVEALLRWEHPLLGAVAPNNFIPLAEKTALMPQITAWVLQTGIAQAALWQQRGHRF 427 Query: 434 PVAFNASARDFDSDE----LRELLAQQLKLHKVPPALIEIEFTEHAMANHPQQVRQRVQA 489 V+ N SA D + + LR LLAQ H + P IEIEFTE AM HPQ+V +++Q Sbjct: 428 AVSLNVSAVDLEQADFITNLRSLLAQ----HALAPGAIEIEFTESAMIRHPQRVAEQLQQ 483 Query: 490 LRELGVKVAIDDFGAGFSNLSYLKNIPADTMKIDRSFIHRLLDDEADQLIVPSILHLAHN 549 + LGVK+AIDDFG G+SNL YLK+IPA +KID+SFI L +D ++VP+++ L H+ Sbjct: 484 ISALGVKIAIDDFGTGYSNLGYLKSIPAHALKIDQSFIRTLPASRSDSVLVPAMIRLGHD 543 Query: 550 LGFSVVAEGLESERTATLLRHLGCDYGQGYAIARPMPLAELEAWL 594 G VVAEG+ESE +LR GCD GQGY IA+PM A L+AWL Sbjct: 544 FGQQVVAEGIESETVYQMLRDWGCDEGQGYWIAKPMSAAALDAWL 588 >ref|NP_637143.1| hypothetical protein XCC1777 [Xanthomonas campestris pv. campestris str. ATCC 33913] ref|YP_243529.1| hypothetical protein XC_2459 [Xanthomonas campestris pv. campestris str. 8004] ref|YP_001903892.1| signaling protein [Xanthomonas campestris pv. campestris str. B100] gb|AAM41067.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAY49509.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] emb|CAP51847.1| signaling protein [Xanthomonas campestris pv. campestris] Length = 618 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 284/583 (48%), Positives = 372/583 (63%), Gaps = 9/583 (1%) Query: 18 ESQRLAQLHGYCVLDTPPDKLCDQVTQLACSMFDVEIALVALVDEHRQWFKSRVGLEVSE 77 E+ RLA LHG C+LD+PPD + D + +A M EIALV+LVDEHRQWFK+RVGLE E Sbjct: 18 EAARLAVLHGLCLLDSPPDPVFDTIAAMAARMLGTEIALVSLVDEHRQWFKARVGLEAPE 77 Query: 78 TPRADSFCNHAIQTRHGMVVTDALQDARFSRHALVTGAPFIRFYAGAPLVTPQGLSLGTL 137 TPR +FC HA+++ +V+ DAL D RF + LV GAP IRFYAGAPL G ++GTL Sbjct: 78 TPRKHAFCAHALRSDDVLVIPDALLDPRFCNNPLVLGAPHIRFYAGAPLKLRDGHTIGTL 137 Query: 138 CIIDSRPRPDFGASQFAQLNQLAAIVMERLEQLRNRGYIDHVTALPNRARLMEVLRVRGH 197 C+I + PR A Q QL L + + R+E LR+ Y + T LPNRAR E L Sbjct: 138 CVIGTSPRAGLDAEQRIQLEGLRDLAVLRVENLRSSTYRNGPTGLPNRARFSEDLDAVLL 197 Query: 198 ARPGASGADAAVAVDVCPREYLFDMVKALGWDYAEGFLMEVSRTLRRVLGTLP----LYR 253 R S A A+AVD+C +Y DMVKALGWDYA+G+ V+ +R++ LP LYR Sbjct: 198 QRTADSAA-TAIAVDLCGSDYFRDMVKALGWDYADGY---VALAYKRLISKLPAGTALYR 253 Query: 254 VTTTTFVYLDETA-PAQRRRRIADIEQRFTPALEFQGIPHLLDIAIGVLPMEEDVSGGDV 312 + TTTF ++ TA P + + I + F LE QGIPH +IG + +E D Sbjct: 254 LDTTTFAFMVTTADPLRLSALCSKISKGFVAPLEHQGIPHTAVASIGAVLLETSYGAADT 313 Query: 313 VRSLLTVIDVSREEGVSPRLFESVHAEKQRYAFWLLAALPMALTTPDELVLHFQPKVRLR 372 +RSL T +DV+RE ++ L+E H QR F LLAALP AL + ++L LH+QP+V L Sbjct: 314 LRSLTTSVDVAREHCLTWSLYERKHDVVQRNTFRLLAALPAALASSNQLRLHYQPRVDLH 373 Query: 373 DGACVGVEALIRWHHPIHGNIPPDVFIPLAEKTGQIRQVTAWVLRQVVAQVARWLKSGRA 432 D CV VEAL+RW HP+ G + P FIP+AEKT I ++TAWV+ Q +AQ ARW + G Sbjct: 374 DHRCVAVEALLRWQHPMIGPVMPSDFIPMAEKTALINRITAWVIDQGIAQAARWQQQGLD 433 Query: 433 LPVAFNASARDFDSDELRELLAQQLKLHKVPPALIEIEFTEHAMANHPQQVRQRVQALRE 492 +A N SA D D LL + L HK+ P +EIEFTE AM HP+ + +++ A+ Sbjct: 434 FNLALNVSAADLDQPGFVGLLRRGLDRHKLDPRRLEIEFTESAMIRHPEHLSEQLAAVAA 493 Query: 493 LGVKVAIDDFGAGFSNLSYLKNIPADTMKIDRSFIHRLLDDEADQLIVPSILHLAHNLGF 552 LGV +AIDDFG G+SN SYLK +PA ++KID+SF+ L D D+ +VP+++ L H+LG Sbjct: 494 LGVHIAIDDFGTGYSNFSYLKQLPASSLKIDQSFVRSLPDSRTDRTLVPAMIQLGHSLGQ 553 Query: 553 SVVAEGLESERTATLLRHLGCDYGQGYAIARPMPLAELEAWLE 595 VVAEG+ES + LR GCD GQGY IA+PMP A LEAWLE Sbjct: 554 RVVAEGIESAQAYAQLRSWGCDEGQGYWIAKPMPAAALEAWLE 596 >ref|YP_363556.1| putative phosphodiesterase [Xanthomonas campestris pv. vesicatoria str. 85-10] emb|CAJ23502.1| putative phosphodiesterase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 666 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 284/580 (48%), Positives = 361/580 (62%), Gaps = 4/580 (0%) Query: 18 ESQRLAQLHGYCVLDTPPDKLCDQVTQLACSMFDVEIALVALVDEHRQWFKSRVGLEVSE 77 ES RL L G C+LD+PPD + D V +A D EIALV+LVDEHRQWFK+R+GLE E Sbjct: 66 ESTRLEVLRGLCLLDSPPDPVFDTVAAMAARSLDAEIALVSLVDEHRQWFKARIGLEARE 125 Query: 78 TPRADSFCNHAIQTRHGMVVTDALQDARFSRHALVTGAPFIRFYAGAPLVTPQGLSLGTL 137 TPR+ +FC HAI++ MVV DA D RF + LV G PFIRFYAGAPL G S+GTL Sbjct: 126 TPRSQAFCAHAIRSDEVMVVPDARLDPRFCDNPLVMGPPFIRFYAGAPLKLRDGHSIGTL 185 Query: 138 CIIDSRPRPDFGASQFAQLNQLAAIVMERLEQLRNRGYIDHVTALPNRARLMEVLRVRGH 197 C+I + PRP A+ QL L + + R+E LR+ Y D T LPNRAR E L Sbjct: 186 CVIGTSPRPGLDAAAITQLEGLRDLAVLRVENLRSTTYRDGPTGLPNRARFSEDLDTWLS 245 Query: 198 ARPGASGADAAVAVDVCPREYLFDMVKALGWDYAEGFLMEVSRTLRRVL--GTLPLYRVT 255 R A A AVA+DVC +Y DMVKALGW+YA+G++ R L L GTL LYR+ Sbjct: 246 QRDTAP-ATTAVAIDVCGSDYFRDMVKALGWEYADGYVALAQRRLAAYLPGGTL-LYRLD 303 Query: 256 TTTFVYLDETAPAQRRRRIADIEQRFTPALEFQGIPHLLDIAIGVLPMEEDVSGGDVVRS 315 TTF +L + + + + FT LE QGIPH +IG + ++ D +RS Sbjct: 304 PTTFGFLAQAEGQRLATLCTKVAKAFTEPLEHQGIPHTAVASIGAVSLQSSYGAADTIRS 363 Query: 316 LLTVIDVSREEGVSPRLFESVHAEKQRYAFWLLAALPMALTTPDELVLHFQPKVRLRDGA 375 L T +D++RE + L+E H QR F LLAALP AL + +L LHFQP+V L D Sbjct: 364 LTTSVDIARERCLPWSLYERKHDVAQRNTFRLLAALPAALDSASQLRLHFQPRVDLHDHR 423 Query: 376 CVGVEALIRWHHPIHGNIPPDVFIPLAEKTGQIRQVTAWVLRQVVAQVARWLKSGRALPV 435 CVGVEAL+RW HP+ G + P FIP+AEKT I ++TAWV+ +AQ ARW + G + Sbjct: 424 CVGVEALLRWQHPMIGPVVPSDFIPMAEKTALINRITAWVIDNGIAQAARWQQQGLDFNL 483 Query: 436 AFNASARDFDSDELRELLAQQLKLHKVPPALIEIEFTEHAMANHPQQVRQRVQALRELGV 495 A N SA D D LL + L HK+ P +EIEFTE AM HP + +++ + LGV Sbjct: 484 ALNVSAADLDRPGFAGLLRRGLDRHKLDPRRLEIEFTESAMIRHPDHLAEQLATIAALGV 543 Query: 496 KVAIDDFGAGFSNLSYLKNIPADTMKIDRSFIHRLLDDEADQLIVPSILHLAHNLGFSVV 555 +AIDDFG G+SN SYLK +PA ++KID+SFI L D D+ +VP+++ L H+LG VV Sbjct: 544 HIAIDDFGTGYSNFSYLKQLPASSLKIDQSFIRSLPDSRTDRTLVPAMIQLGHSLGQRVV 603 Query: 556 AEGLESERTATLLRHLGCDYGQGYAIARPMPLAELEAWLE 595 AEG+ES LR GCD GQGY IA+PMP A LE WLE Sbjct: 604 AEGIESAEAYAQLRAWGCDEGQGYWIAKPMPAAALETWLE 643 >ref|ZP_08184377.1| diguanylate cyclase/phosphodiesterase with GAF sensor [Xanthomonas gardneri ATCC 19865] gb|EGD17994.1| diguanylate cyclase/phosphodiesterase with GAF sensor [Xanthomonas gardneri ATCC 19865] Length = 618 Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust. Identities = 277/579 (47%), Positives = 360/579 (62%), Gaps = 2/579 (0%) Query: 18 ESQRLAQLHGYCVLDTPPDKLCDQVTQLACSMFDVEIALVALVDEHRQWFKSRVGLEVSE 77 ES RLA L G C+LD+PPD + + + +A EIALV+LVDEHRQWFK+R+GLE E Sbjct: 18 ESTRLAVLRGLCLLDSPPDPMFETIAAMAARSLGAEIALVSLVDEHRQWFKARIGLEAQE 77 Query: 78 TPRADSFCNHAIQTRHGMVVTDALQDARFSRHALVTGAPFIRFYAGAPLVTPQGLSLGTL 137 TPR +FC HAI+ MVV DA D RF + LV G PFIRFYAGAPL G S+GTL Sbjct: 78 TPRDQAFCAHAIRADEVMVVPDAQLDRRFCDNPLVLGPPFIRFYAGAPLKLLDGHSIGTL 137 Query: 138 CIIDSRPRPDFGASQFAQLNQLAAIVMERLEQLRNRGYIDHVTALPNRARLMEVLRVRGH 197 C+I + PRP A+ AQL L + + R+E LR+ Y D T LPNR+R E L Sbjct: 138 CVIGTSPRPGLDAATIAQLEGLRDLAVLRVENLRSTTYRDGPTGLPNRSRFGEDLDAWLS 197 Query: 198 ARPGASGADAAVAVDVCPREYLFDMVKALGWDYAEGFLMEVSRTLRRVL-GTLPLYRVTT 256 R GA A AVAVD+C +Y DMVKALGWDYA+G++ R L L + LYR+ Sbjct: 198 QREGAP-ATTAVAVDICGNDYFRDMVKALGWDYADGYVALAQRRLAAYLPASTALYRLDP 256 Query: 257 TTFVYLDETAPAQRRRRIADIEQRFTPALEFQGIPHLLDIAIGVLPMEEDVSGGDVVRSL 316 TTF +L + + + + F LE QGIPH +IG + ++ D +RSL Sbjct: 257 TTFGFLAQAETQRLSTLCIKVSKAFAEPLEHQGIPHTAVASIGAVALQTSYGAADTIRSL 316 Query: 317 LTVIDVSREEGVSPRLFESVHAEKQRYAFWLLAALPMALTTPDELVLHFQPKVRLRDGAC 376 T +DVSRE + ++E H QR F LLAALP AL + +L LH+QP+V L D C Sbjct: 317 TTAVDVSRERSLPWSMYERKHDVAQRNTFRLLAALPAALDSASQLRLHYQPRVDLHDHRC 376 Query: 377 VGVEALIRWHHPIHGNIPPDVFIPLAEKTGQIRQVTAWVLRQVVAQVARWLKSGRALPVA 436 V VEAL+RW HP+ G + P F+P+AEKT I ++TAWV+ +AQ ARW + G +A Sbjct: 377 VAVEALLRWQHPMIGPVMPSDFVPMAEKTALINRITAWVIDNGIAQAARWQQQGLDFNLA 436 Query: 437 FNASARDFDSDELRELLAQQLKLHKVPPALIEIEFTEHAMANHPQQVRQRVQALRELGVK 496 N SA D D LL + L+ HK+ P +EIEFTE AM HP+ + +++ A+ LGV Sbjct: 437 LNVSAADLDRPGFAGLLKRGLERHKLDPRRLEIEFTESAMIRHPEHLAEQLAAIAALGVH 496 Query: 497 VAIDDFGAGFSNLSYLKNIPADTMKIDRSFIHRLLDDEADQLIVPSILHLAHNLGFSVVA 556 +AIDDFG G+SN SYLK +PA ++KID+SF+ L D D+ +VP+++ L H+LG VVA Sbjct: 497 IAIDDFGTGYSNFSYLKQLPASSLKIDQSFVRSLPDSRTDRTLVPAMIQLGHSLGQRVVA 556 Query: 557 EGLESERTATLLRHLGCDYGQGYAIARPMPLAELEAWLE 595 EG+ES LR GCD GQGY IA+PMP A LE WL+ Sbjct: 557 EGIESAEAYAQLRAWGCDEGQGYWIAKPMPAAALETWLQ 595 >ref|YP_004851392.1| EAL domain-containing protein [Xanthomonas axonopodis pv. citrumelo F1] gb|AEO42094.1| EAL domain protein [Xanthomonas axonopodis pv. citrumelo F1] Length = 618 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 284/580 (48%), Positives = 361/580 (62%), Gaps = 4/580 (0%) Query: 18 ESQRLAQLHGYCVLDTPPDKLCDQVTQLACSMFDVEIALVALVDEHRQWFKSRVGLEVSE 77 ES RL L G C+LD+PPD + D V +A D EIALV+LVDEHRQWFK+R+GLE E Sbjct: 18 ESTRLEVLRGLCLLDSPPDPVFDTVAAMAARSLDAEIALVSLVDEHRQWFKARIGLEARE 77 Query: 78 TPRADSFCNHAIQTRHGMVVTDALQDARFSRHALVTGAPFIRFYAGAPLVTPQGLSLGTL 137 TPR+ +FC HAI++ MVV DA D RF + LV G PFIRFYAGAPL G S+GTL Sbjct: 78 TPRSQAFCAHAIRSDEVMVVPDARLDPRFCDNPLVLGPPFIRFYAGAPLKLRDGHSIGTL 137 Query: 138 CIIDSRPRPDFGASQFAQLNQLAAIVMERLEQLRNRGYIDHVTALPNRARLMEVLRVRGH 197 C+I + PR A+ QL L + + R+E LR+ Y D T LPNRAR E L Sbjct: 138 CVIGTSPREGLDAAAITQLEGLRDLAVLRVENLRSTTYRDGPTGLPNRARFSEDLDTWLS 197 Query: 198 ARPGASGADAAVAVDVCPREYLFDMVKALGWDYAEGFLMEVSRTLRRVL--GTLPLYRVT 255 R A A AVA+DVC +Y DMVKALGW+YA+G++ R L L GTL LYR+ Sbjct: 198 QRDTAP-ATTAVAIDVCGSDYFRDMVKALGWEYADGYVALAQRRLAAYLPGGTL-LYRLD 255 Query: 256 TTTFVYLDETAPAQRRRRIADIEQRFTPALEFQGIPHLLDIAIGVLPMEEDVSGGDVVRS 315 TTF +L + + + + FT LE QGIPH +IG + ++ D +RS Sbjct: 256 PTTFGFLAQAEGQRLATLCTKVAKAFTEPLEHQGIPHTAVASIGAVSLQSSYGAADTIRS 315 Query: 316 LLTVIDVSREEGVSPRLFESVHAEKQRYAFWLLAALPMALTTPDELVLHFQPKVRLRDGA 375 L T +D++RE + L+E H QR F LLAALP AL + +L LHFQP+V L D Sbjct: 316 LTTSVDIARERCLPWSLYERKHDVAQRNTFRLLAALPAALDSASQLRLHFQPRVDLHDHR 375 Query: 376 CVGVEALIRWHHPIHGNIPPDVFIPLAEKTGQIRQVTAWVLRQVVAQVARWLKSGRALPV 435 CVGVEAL+RW HP+ G + P FIP+AEKT I ++TAWV+ +AQ ARW + G L + Sbjct: 376 CVGVEALLRWQHPMIGPVVPSDFIPMAEKTALINRITAWVIDNGIAQAARWQQQGLDLNL 435 Query: 436 AFNASARDFDSDELRELLAQQLKLHKVPPALIEIEFTEHAMANHPQQVRQRVQALRELGV 495 A N SA D D LL + L HK+ P +EIEFTE AM HP + +++ + LGV Sbjct: 436 ALNVSAADLDRPGFAGLLRRGLDRHKLDPRRLEIEFTESAMIRHPDHLAEQLATIAALGV 495 Query: 496 KVAIDDFGAGFSNLSYLKNIPADTMKIDRSFIHRLLDDEADQLIVPSILHLAHNLGFSVV 555 +AIDDFG G+SN SYLK +PA ++KID+SFI L D D+ +VP+++ L H+LG VV Sbjct: 496 HIAIDDFGTGYSNFSYLKQLPASSLKIDQSFIRSLPDSRTDRTLVPAMIQLGHSLGQRVV 555 Query: 556 AEGLESERTATLLRHLGCDYGQGYAIARPMPLAELEAWLE 595 AEG+ES LR GCD GQGY IA+PMP A LE WLE Sbjct: 556 AEGIESAEAYAQLRAWGCDEGQGYWIAKPMPAAALETWLE 595 >ref|ZP_06729511.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gb|EFF49366.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 618 Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust. Identities = 280/579 (48%), Positives = 360/579 (62%), Gaps = 4/579 (0%) Query: 18 ESQRLAQLHGYCVLDTPPDKLCDQVTQLACSMFDVEIALVALVDEHRQWFKSRVGLEVSE 77 ES RL L G C+LD+PPD + D V +A D EIALV+LVDEHRQWFK+R+GLE E Sbjct: 18 ESTRLEVLRGLCLLDSPPDPVFDTVAAMAARSLDAEIALVSLVDEHRQWFKARIGLEARE 77 Query: 78 TPRADSFCNHAIQTRHGMVVTDALQDARFSRHALVTGAPFIRFYAGAPLVTPQGLSLGTL 137 TPR+ +FC HAI++ MVV DA D RF + LV G PFIRFYAGAPL G S+GTL Sbjct: 78 TPRSQAFCAHAIRSDGVMVVPDAQLDPRFCNNPLVLGPPFIRFYAGAPLTLRDGHSIGTL 137 Query: 138 CIIDSRPRPDFGASQFAQLNQLAAIVMERLEQLRNRGYIDHVTALPNRARLMEVLRVRGH 197 C+I + PRP + L L + + R+E LR+ Y D T LPNR+R E L Sbjct: 138 CVIGTSPRPGLDQAAITHLEGLRDLAVLRVENLRSTTYRDGPTGLPNRSRFSEDLDTWLS 197 Query: 198 ARPGASGADAAVAVDVCPREYLFDMVKALGWDYAEGFLMEVSRTLRRVL--GTLPLYRVT 255 R A A AVA+DVC +Y DMVKALGW+YA+G++ R L L GTL LYR+ Sbjct: 198 QRDTAP-ATTAVAIDVCGSDYFRDMVKALGWEYADGYVALAQRRLAAYLPGGTL-LYRLD 255 Query: 256 TTTFVYLDETAPAQRRRRIADIEQRFTPALEFQGIPHLLDIAIGVLPMEEDVSGGDVVRS 315 TTF +L + + + + FT LE QGIPH +IG + ++ D +RS Sbjct: 256 PTTFGFLAQAEGQRLATLCTKVSKAFTEPLEHQGIPHTAVASIGAVSLQSSYGAADTIRS 315 Query: 316 LLTVIDVSREEGVSPRLFESVHAEKQRYAFWLLAALPMALTTPDELVLHFQPKVRLRDGA 375 L T +D++RE + ++E H QR F LLAALP AL + +L LHFQP+V L D Sbjct: 316 LTTSVDIARERCLPWSMYERKHDVAQRNTFRLLAALPAALDSASQLRLHFQPRVDLHDHR 375 Query: 376 CVGVEALIRWHHPIHGNIPPDVFIPLAEKTGQIRQVTAWVLRQVVAQVARWLKSGRALPV 435 CVGVEAL+RW HP+ G + P FIP+AEKT I ++TAWV+ +AQ ARW + G + Sbjct: 376 CVGVEALLRWQHPMIGPVMPSDFIPMAEKTALINRITAWVIDNGIAQAARWQQQGLDFNL 435 Query: 436 AFNASARDFDSDELRELLAQQLKLHKVPPALIEIEFTEHAMANHPQQVRQRVQALRELGV 495 A N SA D D LL + L HK+ P +EIEFTE AM HP + +++ A+ LGV Sbjct: 436 ALNVSAADLDRPGFAGLLRRGLDRHKLDPRRLEIEFTESAMIRHPDHLAEQLAAIAALGV 495 Query: 496 KVAIDDFGAGFSNLSYLKNIPADTMKIDRSFIHRLLDDEADQLIVPSILHLAHNLGFSVV 555 +AIDDFG G+SN SYLK +PA ++KID+SFI L D + D+ +VP+++ L H+LG VV Sbjct: 496 HIAIDDFGTGYSNFSYLKQLPASSLKIDQSFIRSLPDSQTDRTLVPAMIQLGHSLGQRVV 555 Query: 556 AEGLESERTATLLRHLGCDYGQGYAIARPMPLAELEAWL 594 AEG+ES LR GCD GQGY IA+PMP A LE WL Sbjct: 556 AEGIESAEAYAQLRAWGCDEGQGYWIAKPMPAAALETWL 594 >ref|ZP_08186388.1| diguanylate cyclase/phosphodiesterase with GAF sensor [Xanthomonas perforans 91-118] gb|EGD15982.1| diguanylate cyclase/phosphodiesterase with GAF sensor [Xanthomonas perforans 91-118] Length = 618 Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust. Identities = 283/580 (48%), Positives = 360/580 (62%), Gaps = 4/580 (0%) Query: 18 ESQRLAQLHGYCVLDTPPDKLCDQVTQLACSMFDVEIALVALVDEHRQWFKSRVGLEVSE 77 ES RL L G C+LD+PPD + D V +A D EIALV+LVDEHRQWFK+R+GLE E Sbjct: 18 ESTRLEVLRGLCLLDSPPDPVFDTVAAMAARSLDAEIALVSLVDEHRQWFKARIGLEARE 77 Query: 78 TPRADSFCNHAIQTRHGMVVTDALQDARFSRHALVTGAPFIRFYAGAPLVTPQGLSLGTL 137 TPR+ +FC HAI++ MVV DA D RF + LV G PFIRFYAGAPL G S+GTL Sbjct: 78 TPRSQAFCAHAIRSDEVMVVPDARLDPRFCDNPLVLGPPFIRFYAGAPLKLRDGHSIGTL 137 Query: 138 CIIDSRPRPDFGASQFAQLNQLAAIVMERLEQLRNRGYIDHVTALPNRARLMEVLRVRGH 197 C+I + PR A+ QL L + + R+E LR+ Y D T LPNRAR E L Sbjct: 138 CVIGTSPREGLDAAAITQLEGLRDLAVLRVENLRSTTYRDGPTGLPNRARFSEDLDTWLS 197 Query: 198 ARPGASGADAAVAVDVCPREYLFDMVKALGWDYAEGFLMEVSRTLRRVL--GTLPLYRVT 255 R A A AVA+DVC +Y DMVKALGW+YA+G++ R L L GTL LYR+ Sbjct: 198 QRDTAP-ATTAVAIDVCGSDYFRDMVKALGWEYADGYVALAQRRLAAYLPGGTL-LYRLD 255 Query: 256 TTTFVYLDETAPAQRRRRIADIEQRFTPALEFQGIPHLLDIAIGVLPMEEDVSGGDVVRS 315 TTF +L + + + + FT LE QGIPH +IG + ++ D +RS Sbjct: 256 PTTFGFLAQAEGQRLATLCTKVAKAFTEPLEHQGIPHTAVASIGAVSLQSSYGAADTIRS 315 Query: 316 LLTVIDVSREEGVSPRLFESVHAEKQRYAFWLLAALPMALTTPDELVLHFQPKVRLRDGA 375 L T +D++RE + L+E H QR F LLAALP AL + +L LHFQP+V L D Sbjct: 316 LTTSVDIARERCLPWSLYERKHDVAQRNTFRLLAALPAALDSASQLRLHFQPRVDLHDHR 375 Query: 376 CVGVEALIRWHHPIHGNIPPDVFIPLAEKTGQIRQVTAWVLRQVVAQVARWLKSGRALPV 435 CVGVEAL+RW HP+ G + P FIP+AEKT I ++TAWV+ +AQ ARW + G + Sbjct: 376 CVGVEALLRWQHPMIGPVVPSDFIPMAEKTALINRITAWVIDNGIAQAARWQQQGLDFNL 435 Query: 436 AFNASARDFDSDELRELLAQQLKLHKVPPALIEIEFTEHAMANHPQQVRQRVQALRELGV 495 A N SA D D LL + L HK+ P +EIEFTE AM HP + +++ + LGV Sbjct: 436 ALNVSAADLDRPGFAGLLRRGLDRHKLDPRRLEIEFTESAMIRHPDHLAEQLATIAALGV 495 Query: 496 KVAIDDFGAGFSNLSYLKNIPADTMKIDRSFIHRLLDDEADQLIVPSILHLAHNLGFSVV 555 +AIDDFG G+SN SYLK +PA ++KID+SFI L D D+ +VP+++ L H+LG VV Sbjct: 496 HIAIDDFGTGYSNFSYLKQLPASSLKIDQSFIRSLPDSRTDRTLVPAMIQLGHSLGQRVV 555 Query: 556 AEGLESERTATLLRHLGCDYGQGYAIARPMPLAELEAWLE 595 AEG+ES LR GCD GQGY IA+PMP A LE WLE Sbjct: 556 AEGIESAEAYAQLRAWGCDEGQGYWIAKPMPAAALETWLE 595 >ref|NP_642122.1| hypothetical protein XAC1795 [Xanthomonas axonopodis pv. citri str. 306] gb|AAM36658.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 618 Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust. Identities = 280/580 (48%), Positives = 360/580 (62%), Gaps = 4/580 (0%) Query: 18 ESQRLAQLHGYCVLDTPPDKLCDQVTQLACSMFDVEIALVALVDEHRQWFKSRVGLEVSE 77 ES RL L G C+LD+PPD + D V +A D EIA+V+LVDEHRQWFK+R+GLE E Sbjct: 18 ESTRLEVLRGLCLLDSPPDPVFDTVAAMAARSLDAEIAVVSLVDEHRQWFKARIGLEARE 77 Query: 78 TPRADSFCNHAIQTRHGMVVTDALQDARFSRHALVTGAPFIRFYAGAPLVTPQGLSLGTL 137 TPR+ +FC HAI++ MVV DA D RF + LV G PFIRFYAGAPL G +GTL Sbjct: 78 TPRSQAFCAHAIRSDEVMVVPDAQLDPRFCDNPLVLGPPFIRFYAGAPLKLRDGHRIGTL 137 Query: 138 CIIDSRPRPDFGASQFAQLNQLAAIVMERLEQLRNRGYIDHVTALPNRARLMEVLRVRGH 197 C+I + PRP + QL L + + R+E LR+ Y D T LPNR+R E L Sbjct: 138 CVIGTSPRPGLDQAAITQLEGLRDLAVLRVENLRSTTYRDGPTGLPNRSRFSEDLDTWLS 197 Query: 198 ARPGASGADAAVAVDVCPREYLFDMVKALGWDYAEGFLMEVSRTLRRVL--GTLPLYRVT 255 R A A AVA+DVC +Y DMVKALGW+YA+G++ R L L GTL LYR+ Sbjct: 198 QRDTAP-ATTAVAIDVCGSDYFRDMVKALGWEYADGYIALAQRRLAAYLPGGTL-LYRLD 255 Query: 256 TTTFVYLDETAPAQRRRRIADIEQRFTPALEFQGIPHLLDIAIGVLPMEEDVSGGDVVRS 315 TTF +L + + + + FT LE QGIPH +IG + ++ D +RS Sbjct: 256 PTTFGFLAQAEGQRLATLCTKVSKAFTEPLEHQGIPHTAVASIGAVSLQSSYGAADTIRS 315 Query: 316 LLTVIDVSREEGVSPRLFESVHAEKQRYAFWLLAALPMALTTPDELVLHFQPKVRLRDGA 375 L T +D++RE + ++E H QR F LLAALP AL + +L LHFQP+V L D Sbjct: 316 LTTAVDIARERCLPWSMYERKHDVAQRNTFRLLAALPAALDSSSQLRLHFQPRVDLHDHR 375 Query: 376 CVGVEALIRWHHPIHGNIPPDVFIPLAEKTGQIRQVTAWVLRQVVAQVARWLKSGRALPV 435 CVGVEAL+RW HP+ G + P FIP+AEKT I ++TAWV+ +AQ ARW + G + Sbjct: 376 CVGVEALLRWQHPMIGPVMPSDFIPMAEKTALINRITAWVIDNGIAQAARWQQQGLDFNL 435 Query: 436 AFNASARDFDSDELRELLAQQLKLHKVPPALIEIEFTEHAMANHPQQVRQRVQALRELGV 495 A N SA D D LL + L HK+ P +EIEFTE AM HP + +++ A+ LGV Sbjct: 436 ALNVSAADLDRPGFAGLLRRGLDRHKLDPRRLEIEFTESAMIRHPDHLAEQLAAIAALGV 495 Query: 496 KVAIDDFGAGFSNLSYLKNIPADTMKIDRSFIHRLLDDEADQLIVPSILHLAHNLGFSVV 555 +AIDDFG G+SN SYLK +PA ++KID+SFI L D D+ +VP+++ L H+LG VV Sbjct: 496 HIAIDDFGTGYSNFSYLKQLPASSLKIDQSFIRSLPDSRTDRTLVPAMIQLGHSLGQRVV 555 Query: 556 AEGLESERTATLLRHLGCDYGQGYAIARPMPLAELEAWLE 595 AEG+ES LR GCD GQGY IA+PMP A LE WLE Sbjct: 556 AEGIESAEAYAQLRAWGCDEGQGYWIAKPMPAAALETWLE 595