BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0231.p (834 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775125.1| chemotaxis histidine kinase [Herbaspirillum ... 1546 0.0 ref|YP_003444414.1| CheA signal transduction histidine kinase [A... 805 0.0 ref|ZP_08822981.1| CheA signal transduction histidine kinase [Th... 790 0.0 ref|YP_002909547.1| CheA signal transduction histidine kinase [B... 721 0.0 ref|ZP_08274623.1| Signal transduction histidine kinase CheA [Ox... 598 e-168 ref|ZP_08781143.1| CheA signal transduction histidine kinase [Me... 589 e-166 ref|ZP_06889614.1| CheA signal transduction histidine kinase [Me... 488 e-135 ref|YP_001361601.1| CheA signal transduction histidine kinase [K... 487 e-135 ref|ZP_08402547.1| CheA signal transduction histidine kinase [Ru... 479 e-133 ref|YP_782541.1| CheA signal transduction histidine kinases [Rho... 466 e-129 >ref|YP_003775125.1| chemotaxis histidine kinase [Herbaspirillum seropedicae SmR1] gb|ADJ63217.1| chemotaxis histidine kinase protein [Herbaspirillum seropedicae SmR1] Length = 837 Score = 1546 bits (4004), Expect = 0.0, Method: Compositional matrix adjust. Identities = 813/839 (96%), Positives = 816/839 (97%), Gaps = 7/839 (0%) Query: 1 MTLLRDQFIIETRDLLQGISEKLMQLEDAPEHVELLESLFRMVHTLKGNSGLFDVPEMTR 60 MTLLRDQFI+ETRDLLQGISEKLMQLEDAPEHVELLESLFRMVHTLKGNSGLFDVPEMTR Sbjct: 1 MTLLRDQFILETRDLLQGISEKLMQLEDAPEHVELLESLFRMVHTLKGNSGLFDVPEMTR 60 Query: 61 VLHACEDLMDAVRRRQVAYSEVLADRLLDAMDFVAMLCDGLEMEAEQADPHAQEAVQIAS 120 VLHACEDLMDAVRRRQVAYSEVLADRLLDAMDFVAMLCDGLEMEAEQADPHAQEAVQIAS Sbjct: 61 VLHACEDLMDAVRRRQVAYSEVLADRLLDAMDFVAMLCDGLEMEAEQADPHAQEAVQIAS 120 Query: 121 SLRQLIGEHAGVESAVGDLARIGDAQDRGAAIVAAPAAGQALPLRAIPEPLRRQAFAQAQ 180 SLRQLIGEHAGVESAVGDLARIGDAQDRGAAIVAAPAAGQALPLRAIPEPLRRQAFAQAQ Sbjct: 121 SLRQLIGEHAGVESAVGDLARIGDAQDRGAAIVAAPAAGQALPLRAIPEPLRRQAFAQAQ 180 Query: 181 AGGELHWIAYRPSRECFFQGDDPFHRAREVPGFIWGRIDAPAGWPPLAELNAYDCVLHFQ 240 AGGELHWIAYRPSRECFFQGDDPFHRAREVPGFIWGRI+APA WPPLAELNAYDCVLHFQ Sbjct: 181 AGGELHWIAYRPSRECFFQGDDPFHRAREVPGFIWGRIEAPAAWPPLAELNAYDCVLHFQ 240 Query: 241 IVAAASQAELMEYFRYVPDQVELTQLAAQWLAPAPEPAERASAGAHAEPAQDPIDAVMAE 300 IVAAASQAELMEYFRYVPDQVELTQLAAQWLAPAPE AERASAGAHAEPAQDPIDAVMAE Sbjct: 241 IVAAASQAELMEYFRYVPDQVELTQLAAQWLAPAPESAERASAGAHAEPAQDPIDAVMAE 300 Query: 301 IFAIQRQILQSEANMGWQDGRTQAVASTLMNCCRSIGNLELIGELEIARQQSLQLRSCDP 360 IFAIQRQILQSEANMGWQDGRTQAVASTLMNCCRSIGNLELIGELEIARQQSLQLRSCDP Sbjct: 301 IFAIQRQILQSEANMGWQDGRTQAVASTLMNCCRSIGNLELIGELEIARQQSLQLRSCDP 360 Query: 361 LLAWLNANPLPLQRGPAVPAASVESAQAEAVAVEM-----RQESLPQPEALSRQESPQVQ 415 LLAWLNANPLPLQRGP ASV SA+A A A E RQESLPQPEALSRQE PQVQ Sbjct: 361 LLAWLNANPLPLQRGPVASVASVASAEAGAEAAEAVAVEVRQESLPQPEALSRQEPPQVQ 420 Query: 416 LQPPAPPLRESLPEESGRAGRRAEESLSGNKSVKVEQVKIDRLMNLIGEMVVSKNALPYL 475 P LRESLPEESGRAGRRAEESLSGNKSVKVEQVKIDRLMNLIGEMVVSKNALPYL Sbjct: 421 PPAPP--LRESLPEESGRAGRRAEESLSGNKSVKVEQVKIDRLMNLIGEMVVSKNALPYL 478 Query: 476 AQRAEDQFGVRELAREIKAQYAVINRIAEEMQDAIMQVRMMPVSVVFQRFPRLVRDISRK 535 AQRAEDQFGVRELAREIKAQYAVINRIAEEMQDAIMQVRMMPVSVVFQRFPRLVRDISRK Sbjct: 479 AQRAEDQFGVRELAREIKAQYAVINRIAEEMQDAIMQVRMMPVSVVFQRFPRLVRDISRK 538 Query: 536 LGKEVQLVLVGEETEADKNIIEALADPLIHIVRNSLDHGLEGPEQRRASGKPALGSLTIS 595 LGKEVQLVLVGEETEADKNIIEALADPLIHIVRNSLDHGLEGPEQRRASGKPALGSLTIS Sbjct: 539 LGKEVQLVLVGEETEADKNIIEALADPLIHIVRNSLDHGLEGPEQRRASGKPALGSLTIS 598 Query: 596 AAHEGDQVVIVIEDDGKGIDPALIKRKAYEKGLIDEAQLERISDQDAVNLVFSSGFSTAE 655 AAHEGDQVVIVIEDDGKGIDPALIKRKAYEKGLIDEAQLERISDQDAVNLVFSSGFSTAE Sbjct: 599 AAHEGDQVVIVIEDDGKGIDPALIKRKAYEKGLIDEAQLERISDQDAVNLVFSSGFSTAE 658 Query: 656 VVSDLSGRGVGMDVVRNAVEKVNGSLALHSVSGKGTRLQISLPLSMAVTKVMIIESDGQL 715 VVSDLSGRGVGMDVVRNAVEKVNGSLALHSVSGKGTRLQISLPLSMAVTKVMIIESDGQL Sbjct: 659 VVSDLSGRGVGMDVVRNAVEKVNGSLALHSVSGKGTRLQISLPLSMAVTKVMIIESDGQL 718 Query: 716 FGVPMEHVMETVRVPRSSLHFANSSAKMVLRGHILGLKGINQILGIAAEQKTNADGEVAV 775 FGVPMEHVMETVRVPRSSLHFANSSAKMVLRGHILGLKGINQILGIAAEQKTNADGEVAV Sbjct: 719 FGVPMEHVMETVRVPRSSLHFANSSAKMVLRGHILGLKGINQILGIAAEQKTNADGEVAV 778 Query: 776 LVVRVGGQSVGLVIDDFRETVDVIQKPLLGILGGLSLYSGSALMGDGSVLMVLNTREMF 834 LVVRVGGQSVGLVIDDFRETVDVIQKPLLGILGGLSLYSGSALMGDGSVLMVLNTREMF Sbjct: 779 LVVRVGGQSVGLVIDDFRETVDVIQKPLLGILGGLSLYSGSALMGDGSVLMVLNTREMF 837 >ref|YP_003444414.1| CheA signal transduction histidine kinase [Allochromatium vinosum DSM 180] gb|ADC63382.1| CheA signal transduction histidine kinase [Allochromatium vinosum DSM 180] Length = 823 Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust. Identities = 445/848 (52%), Positives = 567/848 (66%), Gaps = 39/848 (4%) Query: 1 MTLLRDQFIIETRDLLQGISEKLMQLE--DAPEHVELLESLFRMVHTLKGNSGLFDVPEM 58 M+ L +QF+ E RD L+ I KL++LE A E L+ LFR+VHTLKGNSGLFD+PEM Sbjct: 1 MSPLLNQFLTEGRDFLEAIGAKLLELERASASEQEALMVELFRLVHTLKGNSGLFDIPEM 60 Query: 59 TRVLHACEDLMDAVRRRQVAYSEVLADRLLDAMDFVAMLCDGLEMEAEQADP-----HAQ 113 TRVLHA EDLMDAVR +VA+S LAD LL+AMDFV++L D + E P HA+ Sbjct: 61 TRVLHAAEDLMDAVRDGRVAFSRELADHLLEAMDFVSLLIDEIAEAGEDGQPPSTSGHAR 120 Query: 114 EAVQIASSLRQLIGEHAGVESAVGDLARIGDAQDRGAAIVAAPAAGQALPLRAIPEPLRR 173 EAV++ +LR L+ E SA GD + + A A+ A+G+ L +PE +R Sbjct: 121 EAVRLGEALRALMAESVR-SSASGDRSEAASTSNGAGANSASEASGR---LGDLPESVRD 176 Query: 174 QAFAQAQAGGELHWIAYRPSRECFFQGDDPFHRAREVPGFIWGRIDAPAGWPPLAELNAY 233 + +G L + YRP ECFF+G+DP + ++P IW R+ A WPPLAEL+AY Sbjct: 177 DLTKRLASGESLCRLRYRPEEECFFKGEDPLFQLTQLPEPIWRRVSAREDWPPLAELDAY 236 Query: 234 DCVLHFQIVAAASQAELMEYFRYVPDQVELTQLAAQWL-------APAPEPAERASAGAH 286 CVL F+++ + A L E+FRYVPDQ+E+ L+A L + PE AS Sbjct: 237 RCVLDFELILSTDAATLAEHFRYVPDQIEIQPLSAAMLEAGTAGASTTPETDSTASEPPW 296 Query: 287 AEPAQDPIDAVMAEIFAIQRQILQSEANMGWQDGRTQAVASTLMNCCRSIGNLELIGELE 346 A+ + + ++++ + A QR+IL + W GR +AV +TL S+G LE Sbjct: 297 ADLSPEALESIRLALDA-QREILTLGDSPLWLGGRLRAVGATLAAILTSLGRDPATSGLE 355 Query: 347 IARQQSLQLRSCDPLLAWLNANPLPLQRGPAVPAASVESAQAEAVAVEMRQESLPQPEAL 406 A + +L S LL WL+ P R PA AS + VA P A Sbjct: 356 KALEAALATDSGTYLLRWLDHQTWPEAR-PAATEASARPVREAIVA------PAPSHPAG 408 Query: 407 SRQESPQVQLQPPAPPLRESLPEESGRAGRRAEESLSGNKSVKVEQVKIDRLMNLIGEMV 466 + Q + +PP + GRRAE+ L+ +++KV+Q KIDRLMNLIGEMV Sbjct: 409 TSQATATASDEPP-------------KFGRRAEDQLANLRTLKVDQAKIDRLMNLIGEMV 455 Query: 467 VSKNALPYLAQRAEDQFGVRELAREIKAQYAVINRIAEEMQDAIMQVRMMPVSVVFQRFP 526 V+KNALPYLA RAE+ +GVRELAREIK QY VINRIAEEMQDAIMQVRM+PVS VFQRFP Sbjct: 456 VAKNALPYLAARAENLYGVRELAREIKTQYGVINRIAEEMQDAIMQVRMLPVSFVFQRFP 515 Query: 527 RLVRDISRKLGKEVQLVLVGEETEADKNIIEALADPLIHIVRNSLDHGLEGPEQRRASGK 586 RLVRD + KLGKEV L++ GE TEADKNIIEALADPLIHIVRNSLDHGLE P +RRA+GK Sbjct: 516 RLVRDTAHKLGKEVHLIMEGESTEADKNIIEALADPLIHIVRNSLDHGLESPAERRAAGK 575 Query: 587 PALGSLTISAAHEGDQVVIVIEDDGKGIDPALIKRKAYEKGLIDEAQLERISDQDAVNLV 646 P G LTISA E D+V+I I DDG+GIDP +I+RKAYEKG+IDEA LER++DQ+AVNLV Sbjct: 576 PPEGRLTISARQESDRVLIEISDDGRGIDPEVIRRKAYEKGIIDEAALERLNDQEAVNLV 635 Query: 647 FSSGFSTAEVVSDLSGRGVGMDVVRNAVEKVNGSLALHSVSGKGTRLQISLPLSMAVTKV 706 F++GFSTAE +SDLSGRGVGMDVVRNA+ +V+GS+ L S G+GTRL++SLPLSMAVT V Sbjct: 636 FAAGFSTAEQISDLSGRGVGMDVVRNAIARVHGSIDLRSRVGEGTRLRLSLPLSMAVTNV 695 Query: 707 MIIESDGQLFGVPMEHVMETVRVPRSSLHFANSSAKMVLRGHILGLKGINQILGIAAEQK 766 MIIES GQ FGVPME V ETVRV R + VLRG ++ L +N +L + A Q+ Sbjct: 696 MIIESAGQRFGVPMEAVAETVRVARRDIRVIKKRLTTVLRGRLVPLVSLNDLLALDAPQR 755 Query: 767 TNADGEVAVLVVRVGGQSVGLVIDDFRETVDVIQKPLLGILGGLSLYSGSALMGDGSVLM 826 N D E+AVLVVR+ + +G+++DD RET+D+I KPL G LG L+ YSGSAL+GDGSVL+ Sbjct: 756 ANDDDELAVLVVRIEKEYLGIIVDDCRETIDIILKPLAGFLGDLTGYSGSALLGDGSVLL 815 Query: 827 VLNTREMF 834 +LN RE+ Sbjct: 816 ILNPRELL 823 >ref|ZP_08822981.1| CheA signal transduction histidine kinase [Thiorhodococcus drewsii AZ1] gb|EGV31910.1| CheA signal transduction histidine kinase [Thiorhodococcus drewsii AZ1] Length = 791 Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust. Identities = 451/838 (53%), Positives = 561/838 (66%), Gaps = 51/838 (6%) Query: 1 MTLLRDQFIIETRDLLQGISEKLMQLEDAPEHVELLESLFRMVHTLKGNSGLFDVPEMTR 60 M L DQF+ E RD+LQ I E+L+QLED+P L++ LFR+VHTLKGNSGLFD+PEMTR Sbjct: 1 MNPLLDQFLTEGRDVLQSIGERLLQLEDSPNDAALMDELFRLVHTLKGNSGLFDLPEMTR 60 Query: 61 VLHACEDLMDAVRRRQVAYSEVLADRLLDAMDFVAMLCDGLEMEAEQADP----HAQEAV 116 VLHA EDLMDA R +V + LADRLL+AMDFVA L D + + P HA +AV Sbjct: 61 VLHAAEDLMDAARDGRVPFDRALADRLLEAMDFVATLIDEIAEAPDDTPPSTARHAGDAV 120 Query: 117 QIASSLRQLIGEHAGVESAVGDLARIGDAQDRGAAIVAAPAAGQALPLRAIPEPLRRQAF 176 ++ +LR L+ + + A G DA A P L A+PE R+ Sbjct: 121 RLGEALRSLLQDDSPPLDADGTQEIPQDAPPALYRTDAGPD------LSALPEQTRQDLR 174 Query: 177 AQAQAGGELHWIAYRPSRECFFQGDDPFHRAREVPGFIWGRIDAPAGWPPLAELNAYDCV 236 + AG L W+ Y P ECFF+G+DPFH+ ++ +W R++A WP LAEL+AY CV Sbjct: 175 QRLDAGESLCWLGYEPEEECFFKGEDPFHQMLQLGAPLWHRLEAREDWPALAELDAYRCV 234 Query: 237 LHFQIVAAASQAELMEYFRYVPDQVELTQLAAQWLAPAPEPAERASAGAHAEPAQDPIDA 296 L F+ + +AS L E+FRYVPDQV++ L+A P+ ASA A A D Sbjct: 235 LRFEAIVSASPERLAEHFRYVPDQVDILPLSALMQTDTPQ----ASATAIGPEAAWSFDR 290 Query: 297 VMAEIFAIQRQILQSEANMGWQDGRTQAVASTLMNCCRSIGNLELIGELEIARQQSLQLR 356 V+A QR+IL W DGR +AVA++L S+ + LE A +L R Sbjct: 291 VLA----AQREILALSDTPPWLDGRLRAVAASLSAAFISVDRAIEVETLEPALASALAAR 346 Query: 357 SCDPLLAWLNANPLPLQRGPAVPAASVESAQAEAVAVEMRQESLPQPEALSRQESPQVQL 416 S PLLAWL+A P + G E+A +A A P S ++P+ Sbjct: 347 SPAPLLAWLDARQPPTEIG--------EAADIDAGA----------PTDSSGAKAPEA-- 386 Query: 417 QPPAPPLRESLPEESGRAGRRAEESLSGNKSVKVEQVKIDRLMNLIGEMVVSKNALPYLA 476 E+ R GRRAE+ L+ +++KV+Q KIDRLMNLIGEMVV+KNALPYLA Sbjct: 387 -------------EAVRFGRRAEDHLTNPRTLKVDQAKIDRLMNLIGEMVVAKNALPYLA 433 Query: 477 QRAEDQFGVRELAREIKAQYAVINRIAEEMQDAIMQVRMMPVSVVFQRFPRLVRDISRKL 536 RAED FGVRELAREIK QYAVINRIAEEMQDAIMQVRMMPVS VFQRFPRLVRDI+ KL Sbjct: 434 GRAEDVFGVRELAREIKTQYAVINRIAEEMQDAIMQVRMMPVSFVFQRFPRLVRDIAHKL 493 Query: 537 GKEVQLVLVGEETEADKNIIEALADPLIHIVRNSLDHGLEGPEQRRASGKPALGSLTISA 596 GKEV+LV+ GE TEADKNIIEALADPL+HIVRNSLDHGLE PE+RRA+GKP+ G L ISA Sbjct: 494 GKEVRLVMEGESTEADKNIIEALADPLVHIVRNSLDHGLEMPEERRAAGKPSEGRLNISA 553 Query: 597 AHEGDQVVIVIEDDGKGIDPALIKRKAYEKGLIDEAQLERISDQDAVNLVFSSGFSTAEV 656 E D+V+I I DDG+GIDP I+RKAYE+GLIDE LER+SDQ+A+NLVF++GFSTAE Sbjct: 554 RQESDRVLIEIADDGRGIDPNRIRRKAYERGLIDETALERLSDQEAINLVFAAGFSTAEQ 613 Query: 657 VSDLSGRGVGMDVVRNAVEKVNGSLALHSVSGKGTRLQISLPLSMAVTKVMIIESDGQLF 716 V+DLSGRGVGMDVVRNA+ +VNG++ L S G+GT L++SLPLSMAVT VMIIES Q F Sbjct: 614 VTDLSGRGVGMDVVRNAIARVNGAIDLRSQLGQGTSLRLSLPLSMAVTNVMIIESAKQRF 673 Query: 717 GVPMEHVMETVRVPRSSLHFANSSAKMVLRGHILGLKGINQILGIAAEQKTNADGEVAVL 776 GVPM+ V ETVRV R + VLRG ++ L +N++L + AEQ N D E AVL Sbjct: 674 GVPMDSVAETVRVARHDIRTIKHRRTTVLRGRLVPLLSLNELLALNAEQIPNDDDEFAVL 733 Query: 777 VVRVGGQSVGLVIDDFRETVDVIQKPLLGILGGLSLYSGSALMGDGSVLMVLNTREMF 834 VVRV + +G+++DD RET+D+I KPL G LGGL+ Y+GSAL+GDGSVL+V N RE+ Sbjct: 734 VVRVDQEYLGIIVDDCRETIDIILKPLAGFLGGLNGYAGSALLGDGSVLLVFNPRELL 791 >ref|YP_002909547.1| CheA signal transduction histidine kinase [Burkholderia glumae BGR1] gb|ACR32312.1| CheA signal transduction histidine kinase [Burkholderia glumae BGR1] Length = 875 Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/911 (47%), Positives = 549/911 (60%), Gaps = 113/911 (12%) Query: 1 MTLLRDQFIIETRDLLQGISEKLMQLEDAPEHVELLESLFRMVHTLKGNSGLFDVPEMTR 60 MT L QFI E+RD+LQ I L+ +E AP+ L+ LFR++HTLKGNSGLF++P MTR Sbjct: 1 MTPLLAQFIAESRDILQSIGRHLIDMELAPDDGALMNELFRLLHTLKGNSGLFELPGMTR 60 Query: 61 VLHACEDLMDAVRRRQVAYSEVLADRLLDAMDFVAMLCDGLEMEAEQADPHAQEAVQIAS 120 +LH EDLMDAVR +VAYS LAD LL+AMD +A D LE AE A Q+ + Sbjct: 61 LLHTAEDLMDAVRNGRVAYSRELADTLLEAMDEIAAQLDALEQGAESIAESASTG-QLGA 119 Query: 121 SLRQLIGEHAGVESAVGDLARIGDAQDRGAAIVAAPAAGQALPLRAIPEPLRRQAFAQAQ 180 +L+ L G A G A A L +PE LR + F +A Sbjct: 120 ALQALSGGRAAAAQPPALAVPAGAAAFPAIADARVQGE-----LAQLPEALRMRLFREAC 174 Query: 181 AGGELHWIAYRPSRECFFQGDDPFHRAREVPGFIWGRIDAPAGWPPLAELNAYDCVLHFQ 240 AG L WI Y+P +CFF+G+DP H R++P W R+ APA W AEL+ Y C + F Sbjct: 175 AGARLRWIVYQPEPDCFFRGEDPLHLVRQIPDTRWMRVRAPAPWTQPAELDIYRCQIVFH 234 Query: 241 IVAAASQAELMEYFRYVPDQVELTQLAAQWLAPAPEPA----------ERASA------- 283 ++ A EL FRYV +QV L A L P A RA A Sbjct: 235 ALSGADGDELDHLFRYVAEQVVCHPLPAAALVWPPGQAGSWPDDRDFPRRARALLDGGDT 294 Query: 284 -----GAHAE----PAQDPIDAVM----------AEIFAIQRQILQSEANMGWQDGRTQ- 323 HA+ P QDP+ + + A A+ R +LQ DG TQ Sbjct: 295 DGLRQYVHAQLARYPEQDPVASTLRWLDLALDCAAHDTALLRHVLQQA------DGETQA 348 Query: 324 ----------------------------------------AVASTLMNCCRSIGNLELIG 343 A+ +TL CC + G L Sbjct: 349 ETAIAATPLSPTQRTALRNLIEAQRDILRRVEPLAQGALQAIGATLSACCAASGEAGLRA 408 Query: 344 ELEIARQQSLQLRSCDPLLAWLNANPLPLQRGPAVPAASVESAQAEAVAVEMRQESLPQP 403 L A S+ +S PLL WL + L PA AA++ S+ + + + LPQP Sbjct: 409 SLGDALASSVAGQSAQPLLGWLQHHADRLL--PA--AAALPSSTPASCPSQPGTQGLPQP 464 Query: 404 EALSRQESPQVQLQPPAPPLRESLPEESGRAGRRAEESLSGNKSVKVEQVKIDRLMNLIG 463 A+ +SP + G A +R E+ G + +KV+Q +IDRLM+LIG Sbjct: 465 PAV---DSP-----------------DPGGAAKRGEDGAGGARVLKVDQARIDRLMDLIG 504 Query: 464 EMVVSKNALPYLAQRAEDQFGVRELAREIKAQYAVINRIAEEMQDAIMQVRMMPVSVVFQ 523 E+VV+KN LPYLA RA++ +GVREL REIKAQYAVINRIAEE+QDAIMQVRM+P+S +FQ Sbjct: 505 EIVVAKNGLPYLASRADEHYGVRELGREIKAQYAVINRIAEELQDAIMQVRMLPLSFIFQ 564 Query: 524 RFPRLVRDISRKLGKEVQLVLVGEETEADKNIIEALADPLIHIVRNSLDHGLEGPEQRRA 583 RFPRLVRDISRKLGKEV+LV+ G+ETEADKNI+EALADPLIHI+RNSLDHGLE P+QR A Sbjct: 565 RFPRLVRDISRKLGKEVELVIEGDETEADKNIVEALADPLIHILRNSLDHGLETPQQRIA 624 Query: 584 SGKPALGSLTISAAHEGDQVVIVIEDDGKGIDPALIKRKAYEKGLIDEAQLERISDQDAV 643 +GKPA+G L I A HE D+V+I + DDG+GIDP +KRKAY KGLI EA LE +SD +A Sbjct: 625 AGKPAVGRLLIRAQHEADRVLIDVSDDGRGIDPQAVKRKAYSKGLISEAALESLSDVEAQ 684 Query: 644 NLVFSSGFSTAEVVSDLSGRGVGMDVVRNAVEKVNGSLALHSVSGKGTRLQISLPLSMAV 703 LVF+ GFSTAEVVSDLSGRGVGMD VR+AVEKVNGS+AL S G+GTRL+++LPLSMAV Sbjct: 685 RLVFTPGFSTAEVVSDLSGRGVGMDAVRSAVEKVNGSIALDSTPGRGTRLRLTLPLSMAV 744 Query: 704 TKVMIIESDGQLFGVPMEHVMETVRVPRSSLHFANSSAKMVLRGHILGLKGINQILGIAA 763 + VMIIE+ GQ+FGVPM+ V+ETVRVP+S + VLR I+ L +N +L + A Sbjct: 745 SNVMIIETGGQIFGVPMDQVVETVRVPQSVIRTIKQRRTAVLRDRIVPLVALNDLLALDA 804 Query: 764 EQKTNADGEVAVLVVRVGGQSVGLVIDDFRETVDVIQKPLLGILGGLSLYSGSALMGDGS 823 + NAD E+A LVVR+ G+ VG+++D+FR T D+I KP+ G+L GL Y+GSAL+GDGS Sbjct: 805 APRPNADDELATLVVRLEGEHVGILVDEFRVTTDIILKPMSGVLAGLGGYAGSALLGDGS 864 Query: 824 VLMVLNTREMF 834 VL+VLN +E+ Sbjct: 865 VLIVLNPKELL 875 >ref|ZP_08274623.1| Signal transduction histidine kinase CheA [Oxalobacteraceae bacterium IMCC9480] gb|EGF31908.1| Signal transduction histidine kinase CheA [Oxalobacteraceae bacterium IMCC9480] Length = 869 Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust. Identities = 322/539 (59%), Positives = 388/539 (71%), Gaps = 37/539 (6%) Query: 297 VMAEIFAIQRQILQSEANMGWQDGRTQAVASTLMNCCRSIGNLELIGELEIARQQSLQLR 356 + A + A Q IL+ + W GR +AV STL C SIG +L+ L+ A ++ Sbjct: 365 IAATVIATQLMILRMPDQVNWLPGRLKAVGSTLAACFASIGRTDLLPGLDAALAGAMAQS 424 Query: 357 SCDPLLAWLNANP-LPLQRGPAVPAASVESAQAEAVAVEMRQESLPQPEALSRQESPQVQ 415 + PLLAWL A P + VP VE+ A++ AV + + Sbjct: 425 ASGPLLAWLLAYAEAPAEVADTVP---VEAPAADSAAVMLADSDI--------------- 466 Query: 416 LQPPAPPLRESLPEESGRAGRRAEESLS-GNKSVKVEQVKIDRLMNLIGEMVVSKNALPY 474 + RRAE+S + K+++V+Q KIDRLMNLIGEMVV+KN LPY Sbjct: 467 -----------------KFNRRAEDSTTVSAKTLRVDQDKIDRLMNLIGEMVVAKNGLPY 509 Query: 475 LAQRAEDQFGVRELAREIKAQYAVINRIAEEMQDAIMQVRMMPVSVVFQRFPRLVRDISR 534 LA RAE FGVREL+REIK QYAVINRIAEEMQ AIMQVRMMPVS VFQRFPRLVRDISR Sbjct: 510 LAGRAESVFGVRELSREIKTQYAVINRIAEEMQGAIMQVRMMPVSFVFQRFPRLVRDISR 569 Query: 535 KLGKEVQLVLVGEETEADKNIIEALADPLIHIVRNSLDHGLEGPEQRRASGKPALGSLTI 594 KLGKEV LVL+GE+TEADKNIIEALADPLIHIVRNSLDHGLE PE RRA+GKPA G L I Sbjct: 570 KLGKEVSLVLIGEDTEADKNIIEALADPLIHIVRNSLDHGLESPEVRRAAGKPAEGKLEI 629 Query: 595 SAAHEGDQVVIVIEDDGKGIDPALIKRKAYEKGLIDEAQLERISDQDAVNLVFSSGFSTA 654 A E +V+I I DDGKGIDP +IKRKAYEKGLIDEA LERISDQ+A+NLVF++GFSTA Sbjct: 630 RATQEAGRVIIDIIDDGKGIDPLIIKRKAYEKGLIDEATLERISDQEAINLVFAAGFSTA 689 Query: 655 EVVSDLSGRGVGMDVVRNAVEKVNGSLALHSVSGKGTRLQISLPLSMAVTKVMIIESDGQ 714 EVVSDLSGRGVGMDVVR AVE+VNG + L S G GTRL++SLPLS+AVT VMIIES+ Q Sbjct: 690 EVVSDLSGRGVGMDVVRAAVEQVNGIVTLESTVGTGTRLRLSLPLSIAVTNVMIIESNRQ 749 Query: 715 LFGVPMEHVMETVRVPRSSLHFANSSAKMVLRGHILGLKGINQILGIAAEQKTNADGEVA 774 +FGVPM+ V+ETVRVPR+++H + VLRG ++ L+ +N +L EQ N + E+A Sbjct: 750 IFGVPMDMVVETVRVPRTAIHAIKNHQTAVLRGRVVPLRSLNTLLATNEEQLANDEDELA 809 Query: 775 VLVVRVGGQSVGLVIDDFRETVDVIQKPLLGILGGLSLYSGSALMGDGSVLMVLNTREM 833 LVVR+ G+ VG+V+DDFRE VD+I KP+ GILGGLS Y+GSAL+GDGSVLMVLN +E+ Sbjct: 810 TLVVRLNGEHVGIVVDDFREVVDIILKPMGGILGGLSGYTGSALLGDGSVLMVLNLKEL 868 Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 132/268 (49%), Positives = 170/268 (63%), Gaps = 16/268 (5%) Query: 1 MTLLRDQFIIETRDLLQGISEKLMQLEDAPEHVELLESLFRMVHTLKGNSGLFDVPEMTR 60 MT L QF+ E R+ LQGISEKLMQLE+ P+ L+ LFR+VHTLKGN GLFD PEM R Sbjct: 1 MTPLLQQFLAEAREFLQGISEKLMQLENTPDDGALMGELFRLVHTLKGNCGLFDYPEMLR 60 Query: 61 VLHACEDLMDAVRRRQVAYSEVLADRLLDAMDFVAMLCDGLEMEAEQADPHAQEAVQIAS 120 VLHA EDLM VR + YS+ LADRLLDAMDFV++L D ++ + A HA AV +A+ Sbjct: 61 VLHAAEDLMVVVRDGDLPYSQTLADRLLDAMDFVSLLLDEIDAGNDSAAAHAPAAVAMAA 120 Query: 121 SLRQLIGEHAGVESAVGDLARIGDAQDRGAAIVAAPAAGQALPLRAIPEPLRRQAFAQAQ 180 +LRQLI G++ G+ A D G A LPL+ +PE LR + + Sbjct: 121 ALRQLIAAPQGIDDTSGEAATATD----GTA---------GLPLQQVPEALRMDWY---R 164 Query: 181 AGGELHWIAYRPSRECFFQGDDPFHRAREVPGFIWGRIDAPAGWPPLAELNAYDCVLHFQ 240 G L WI+Y P ECFF+G+DPF AR VP W R+ A + WP L +L+AY L Sbjct: 165 TGKALLWISYTPEAECFFKGEDPFFLARNVPDIAWQRVGAASAWPALDDLDAYHANLQLD 224 Query: 241 IVAAASQAELMEYFRYVPDQVELTQLAA 268 +V++AS+A L E+FRYVP+Q+ +T L A Sbjct: 225 LVSSASRAALDEHFRYVPEQITITPLTA 252 >ref|ZP_08781143.1| CheA signal transduction histidine kinase [Methylobacter tundripaludum SV96] gb|EGW23318.1| CheA signal transduction histidine kinase [Methylobacter tundripaludum SV96] Length = 877 Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust. Identities = 323/536 (60%), Positives = 388/536 (72%), Gaps = 33/536 (6%) Query: 298 MAEIFAIQRQILQSEANMGWQDGRTQAVASTLMNCCRSIGNLELIGELEIARQQSLQLRS 357 A+I QR+IL + W GR A A+ L C RS G +E + LE A ++L Sbjct: 374 FADILQAQREILGLPDSDAWLPGRLNAAATALAACQRSAGRIEALPTLEAALAEALDSVE 433 Query: 358 CDPLLAWLNANPLPLQRGPAVPAASVESAQAEAVAVEMRQESLPQPEALSRQESPQVQLQ 417 PLLAWL+A+ PL R ++ ++AEA +++R AL ES Sbjct: 434 AAPLLAWLDAHA-PLDR------SATAESEAEAAPMQVRN-------ALIDVES------ 473 Query: 418 PPAPPLRESLPEESGRAGRRAEESLSGNKSVKVEQVKIDRLMNLIGEMVVSKNALPYLAQ 477 + GRR E+S G K++KV+Q KID LM LIGEMVV+KN+LPYLA Sbjct: 474 -------------DNKFGRRVEDSYVGPKTLKVDQDKIDNLMGLIGEMVVAKNSLPYLAS 520 Query: 478 RAEDQFGVRELAREIKAQYAVINRIAEEMQDAIMQVRMMPVSVVFQRFPRLVRDISRKLG 537 RAE Q+GVREL REIK QYAVINRIAEEMQDAIMQVRMMPVS VFQRFPRLVRD SRKL Sbjct: 521 RAETQYGVRELGREIKTQYAVINRIAEEMQDAIMQVRMMPVSFVFQRFPRLVRDTSRKLA 580 Query: 538 KEVQLVLVGEETEADKNIIEALADPLIHIVRNSLDHGLEGPEQRRASGKPALGSLTISAA 597 KEV L+L GE TEADKNI+EALADPLIHIVRNSLDHG+E PE RRA+GKP G LTI A Sbjct: 581 KEVNLILEGENTEADKNIVEALADPLIHIVRNSLDHGIETPEVRRAAGKPPAGRLTIRAT 640 Query: 598 HEGDQVVIVIEDDGKGIDPALIKRKAYEKGLIDEAQLERISDQDAVNLVFSSGFSTAEVV 657 E D+V I I DDGKGIDP +IKRKAYEKG+IDE+ +ER+SDQ+AVNLVF++GFSTAEV+ Sbjct: 641 QEADRVYIEISDDGKGIDPTIIKRKAYEKGIIDESTMERLSDQEAVNLVFAAGFSTAEVI 700 Query: 658 SDLSGRGVGMDVVRNAVEKVNGSLALHSVSGKGTRLQISLPLSMAVTKVMIIESDGQLFG 717 SDLSGRGVGMDVVR+AVEKVNG+++L S GKGT +++SLPLSMAVT VMI+ESD Q+FG Sbjct: 701 SDLSGRGVGMDVVRSAVEKVNGTVSLESELGKGTLIRLSLPLSMAVTNVMIVESDKQIFG 760 Query: 718 VPMEHVMETVRVPRSSLHFANSSAKMVLRGHILGLKGINQILGIAAEQKTNADGEVAVLV 777 VPM+ V+ETVRV RS++ VLRG I+ L +N++L I AE N D E+A LV Sbjct: 761 VPMDMVVETVRVSRSAIRTIKKRQTTVLRGRIVPLLALNELLAIDAEPYANEDDELATLV 820 Query: 778 VRVGGQSVGLVIDDFRETVDVIQKPLLGILGGLSLYSGSALMGDGSVLMVLNTREM 833 VRV + VG+V+DDFRETVD+I KP+ GI+GGL YSGSAL+GDGSVLMVLN RE+ Sbjct: 821 VRVHEEHVGIVVDDFRETVDIILKPMAGIIGGLGGYSGSALLGDGSVLMVLNPREL 876 Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 128/274 (46%), Positives = 171/274 (62%), Gaps = 12/274 (4%) Query: 1 MTLLRDQFIIETRDLLQGISEKLMQLEDAPEHVELLESLFRMVHTLKGNSGLFDVPEMTR 60 M L +QF+ E RD L GI+EKLMQLE+ P ++ LFR+VHTLKGNSGLF+ PEMTR Sbjct: 1 MNPLLEQFLSEARDFLHGIAEKLMQLENDPGSTPVMNELFRLVHTLKGNSGLFEFPEMTR 60 Query: 61 VLHACEDLMDAVRRRQVAYSEVLADRLLDAMDFVAMLCDGLEM-EAEQADPHAQEAVQIA 119 VLHA EDL+DAVR +V YS+ L DRLLDAMDFV +L D +E + HAQ A+++A Sbjct: 61 VLHAGEDLLDAVRDGRVGYSQELTDRLLDAMDFVNLLVDEIESNDGAIGSDHAQNALRLA 120 Query: 120 SSLRQLIGEHAGVESAVGDLARIGDAQDRGAAIVAAPAAGQALP-LRAIPEPLRRQAFAQ 178 SLRQLIG +AV A + +A + +++ P LP L +PE R + + Sbjct: 121 ESLRQLIG-----VTAVEVKAPVAEAS-QASSVHNMP----ELPRLAELPEQQRMALYRE 170 Query: 179 AQAGGELHWIAYRPSRECFFQGDDPFHRAREVPGFIWGRIDAPAGWPPLAELNAYDCVLH 238 A AG L ++ Y P +ECFF+G+DPFH+AR++P +W + W AEL+AY C L Sbjct: 171 ALAGDTLLFVEYTPEQECFFKGEDPFHQARQIPDVVWQSVLPREPWSAPAELDAYHCNLV 230 Query: 239 FQIVAAASQAELMEYFRYVPDQVELTQLAAQWLA 272 F + A+ EL E FRY P+Q+ + L LA Sbjct: 231 FNALTTAAPEELYELFRYTPEQLRIVPLPPIVLA 264 >ref|ZP_06889614.1| CheA signal transduction histidine kinase [Methylosinus trichosporium OB3b] gb|EFH01891.1| CheA signal transduction histidine kinase [Methylosinus trichosporium OB3b] Length = 890 Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust. Identities = 250/427 (58%), Positives = 318/427 (74%), Gaps = 7/427 (1%) Query: 408 RQESPQVQLQPPAPPLRESLPEESGRAGRRAEESLSGNKSVKVEQVKIDRLMNLIGEMVV 467 R S + + APP + L ES A R G + +KV Q K+DRLM+LIGEMVV Sbjct: 471 RHASELLDAREAAPPSAKRLAAESSPADR-------GVRVLKVGQEKVDRLMDLIGEMVV 523 Query: 468 SKNALPYLAQRAEDQFGVRELAREIKAQYAVINRIAEEMQDAIMQVRMMPVSVVFQRFPR 527 +KNALPYLA RAE +G REL+REIKAQYA+INRIAEEMQD IMQVRM+PV +FQRFPR Sbjct: 524 AKNALPYLAGRAEAHYGSRELSREIKAQYAIINRIAEEMQDGIMQVRMLPVGAIFQRFPR 583 Query: 528 LVRDISRKLGKEVQLVLVGEETEADKNIIEALADPLIHIVRNSLDHGLEGPEQRRASGKP 587 LVRD++R+LGK V+L + GEETEADKNI+E+LADP+IHI+RNSLDHGLE P+ RRA+GKP Sbjct: 584 LVRDVARQLGKSVRLTIEGEETEADKNIVESLADPMIHILRNSLDHGLEPPDVRRAAGKP 643 Query: 588 ALGSLTISAAHEGDQVVIVIEDDGKGIDPALIKRKAYEKGLIDEAQLERISDQDAVNLVF 647 G LT+ A EGD+V I +EDDGKGIDP +IKRKA KGLIDE +LE +SD DA+ LVF Sbjct: 644 DEGRLTVRAFQEGDRVRIEVEDDGKGIDPEVIKRKALAKGLIDEQRLETLSDNDAIQLVF 703 Query: 648 SSGFSTAEVVSDLSGRGVGMDVVRNAVEKVNGSLALHSVSGKGTRLQISLPLSMAVTKVM 707 ++GFSTAE +S LSGRGVGMDVV++++EKV G + L S GKG R+ +SLPLS++V+ VM Sbjct: 704 AAGFSTAEQISSLSGRGVGMDVVKSSLEKVGGQVQLTSEKGKGARILLSLPLSISVSNVM 763 Query: 708 IIESDGQLFGVPMEHVMETVRVPRSSLHFANSSAKMVLRGHILGLKGINQILGIAAEQKT 767 +++ GQ +GVP++ V+ETVRV R + H VLRG I+ L +LG + Sbjct: 764 MVDIGGQRYGVPIDVVVETVRVARKNTHIIKQHRTAVLRGRIVPLYSAYDLLGSVGDPAP 823 Query: 768 NADGEVAVLVVRVGGQSVGLVIDDFRETVDVIQKPLLGILGGLSLYSGSALMGDGSVLMV 827 N D E AVLV RV G +VG+++D F +T+DVI KPL G L L+ +SGSAL+GDGSVL+V Sbjct: 824 NDDDEFAVLVARVAGHTVGVIVDGFAQTIDVILKPLEGPLTHLTGFSGSALLGDGSVLLV 883 Query: 828 LNTREMF 834 L+ +E+ Sbjct: 884 LDLKELI 890 Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/272 (35%), Positives = 138/272 (50%), Gaps = 11/272 (4%) Query: 1 MTLLRDQFIIETRDLLQGISEKLMQLEDAPEHVELLESLFRMVHTLKGNSGLFDVPEMTR 60 M L QF++E RD L I KL+ LE+ PE ++ +FR+VHTLKGNSGLFD+P +T Sbjct: 1 MNPLLQQFLVEARDYLDQIDHKLLLLEETPEDDTIIGEIFRLVHTLKGNSGLFDMPSLTS 60 Query: 61 VLHACEDLMDAVRRRQVAYSEVLADRLLDAMDFVAMLCDGLEMEAEQADPHAQEAVQIAS 120 VLHA ED++D VR + L D LL A+DFV + D ++ +A +A ++A Sbjct: 61 VLHAAEDVLDRVRDHTLLIDSELTDALLAALDFVNRVLDDVDTTDAVPARYADDAAKLAG 120 Query: 121 SLRQLIGEHAGVESAVGDLARIGDAQDRGAAIVAAPAAGQALPLRAIPEPLRRQAFAQAQ 180 +LR + E SA G+ DA A + P L AIP+ R +AF + Sbjct: 121 ALRDWLPER----SASGN-----DASGPACAPLDPPE--DWFWLSAIPDLERLEAFERLA 169 Query: 181 AGGELHWIAYRPSRECFFQGDDPFHRAREVPGFIWGRIDAPAGWPPLAELNAYDCVLHFQ 240 + YRP +CFF+G+DP R PG + + WP L+ Y L Sbjct: 170 PDEYAVAVRYRPEPDCFFKGEDPLQLLRTTPGLLLFDVGPAEPWPEPDSLDVYRANLVID 229 Query: 241 IVAAASQAELMEYFRYVPDQVELTQLAAQWLA 272 + AS E+ +FRYV DQ + ++ LA Sbjct: 230 ALTNASLEEIESHFRYVRDQTAIYEIPRYALA 261 >ref|YP_001361601.1| CheA signal transduction histidine kinase [Kineococcus radiotolerans SRS30216] gb|ABS03337.1| CheA signal transduction histidine kinase [Kineococcus radiotolerans SRS30216] Length = 814 Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust. Identities = 320/838 (38%), Positives = 467/838 (55%), Gaps = 82/838 (9%) Query: 7 QFIIETRDLLQGISEKLMQLEDAPEHVELLESLFRMVHTLKGNSGLFDVPEMTRVLHACE 66 QF+ E+ DLL + E L++LE P +L+ ++FR HT KG+SGLFD+PE+TR+ HA E Sbjct: 8 QFVAESADLLADVDEGLLRLEAEPGDGDLVNAVFRAAHTFKGSSGLFDLPELTRLTHAAE 67 Query: 67 DLMDAVRRRQVAYSEVLADRLLDAMDFVAMLCDGLEMEAEQADPHAQEAVQIASSLRQLI 126 DL+DAVR +++ + + D LL A D V +E + +EA ++ LR + Sbjct: 68 DLLDAVRAGRLSLTPEMVDALLCAFDTVRRWMPTIEATGRTPEDAGREADTQSAVLRSWL 127 Query: 127 GEHAGVESAVGDLARIGDAQDRGAAI-------VAAPAAGQALPLRAIPEPLRR--QAFA 177 G GDA GA + A P A LP + P R Q A Sbjct: 128 GG--------------GDAPAEGAPVPQGTSGGTAGPTAPADLPSWVLDLPAERLEQLRA 173 Query: 178 Q-AQAGGELHWIAYRPSRECFFQGDDPFHRAREVPGFIWGRIDAPAGWPPLAELNAYDCV 236 A + + Y P CFF+G+DP + R+VP + + E++ Y+CV Sbjct: 174 WLATTAATVRAVRYEPDAACFFRGEDPLNLFRQVPALELLHTAPAEPFAGIDEVDEYECV 233 Query: 237 LHFQIVAAASQAELMEYFRYVPDQVELTQLAAQWLAPAPEPAERASAGAHAEPAQDPI-- 294 L F + A+ EL FRYVP+QVE+ +++A LA R G AEP P+ Sbjct: 234 LRFTALTRAAVGELAHVFRYVPEQVEVVEVSADNLA-------RLLDGTPAEPEPAPVVT 286 Query: 295 ----DAVMAEIFAIQRQILQSEANMGWQD-----------GRTQAVASTLMNCCRSIGNL 339 D + A + Q ++L A +G D R ++ A + + G Sbjct: 287 TSTADPLHALLLQAQCRLL---ARVGAGDDDVADGPPIGAARVRSAAGVALRVATAAGVD 343 Query: 340 ELIGELEIARQQSLQLRSCDPLLAWLNANPLPLQRGPAVPAASVESAQAEAVAVEMRQES 399 G +A + L S PL+ W+ G PA +V +Q Sbjct: 344 TAPGVAALA--EFLATGSPGPLVRWIGET----AAGAGTPAPTVP-----------QQGE 386 Query: 400 LPQPEALSRQESPQVQLQPPAPPLRESLPEESGRAGRRAEESLSGNKSVKVEQVKIDRLM 459 + + SP+ P P + E++ RA R +KVEQ K+D+L+ Sbjct: 387 AAAAAVPAPRTSPEGSDAAPPPASATAPAEDASRASR----------VLKVEQAKVDKLL 436 Query: 460 NLIGEMVVSKNALPYLAQRAEDQFGVRELAREIKAQYAVINRIAEEMQDAIMQVRMMPVS 519 +L+GE+VV+KNALP++AQ AED G R LAR + +YAV++R++EE+Q A+M VRM+PVS Sbjct: 437 DLVGELVVAKNALPFVAQEAEDA-GSRALARRVLDEYAVVSRVSEELQQAVMDVRMLPVS 495 Query: 520 VVFQRFPRLVRDISRKLGKEVQLVLVGEETEADKNIIEALADPLIHIVRNSLDHGLEGPE 579 F R PRLVRD+SRKLGK+V LV GE+T ADK++IE LA+PL+H+VRNSLDHG+E PE Sbjct: 496 TAFARAPRLVRDLSRKLGKKVHLVQEGEDTAADKDVIEMLAEPLVHLVRNSLDHGIETPE 555 Query: 580 QRRASGKPALGSLTISAAHEGDQVVIVIEDDGKGIDPALIKRKAYEKGLIDEAQLERISD 639 QR A+GKP +L + AA +GD V++ I DDG+GID ++RKAYE+GLI E LE + D Sbjct: 556 QRVAAGKPEEATLLLRAAPDGDAVLVEIVDDGRGIDTDAVRRKAYERGLISEEALETLPD 615 Query: 640 QDAVNLVFSSGFSTAEVVSDLSGRGVGMDVVRNAVEKVNGSLALHSVSGKGTRLQISLPL 699 ++A L+F+ GFSTAEV+SD+SGRGVGMD VR+++E++ GS+ + G+G +++ LPL Sbjct: 616 EEAAQLIFAPGFSTAEVISDVSGRGVGMDAVRSSIERLGGSVTTENRRGRGLTVRLRLPL 675 Query: 700 SMAVTKVMIIESDGQLFGVPMEHVMETVRVPRSSLHFANSSAKMVLRGHILGLKGINQIL 759 +MAV++V+++ + GQ FGVP++ V+ETVRV R + + LR ++ L + +L Sbjct: 676 TMAVSQVLLVTAGGQRFGVPLDDVVETVRVDRDEVTRVAGHPVLALRDDVVPLVSLGGLL 735 Query: 760 GIAAEQKTNADGEVAVLVVRVGGQSVGLVIDDFRETVDVIQKPLLGILGGLSLYSGSA 817 G + +A+G + VLVVR +GLV+D F + DVI KPL G L G Y G+A Sbjct: 736 GT--DGDLSAEG-LNVLVVRTATGPLGLVVDRFHQNTDVILKPLEGFLAGTPGYCGTA 790 >ref|ZP_08402547.1| CheA signal transduction histidine kinase [Rubrivivax benzoatilyticus JA2] gb|EGJ10880.1| CheA signal transduction histidine kinase [Rubrivivax benzoatilyticus JA2] Length = 430 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 238/392 (60%), Positives = 312/392 (79%) Query: 443 SGNKSVKVEQVKIDRLMNLIGEMVVSKNALPYLAQRAEDQFGVRELAREIKAQYAVINRI 502 +G K +KV Q KIDRLM+LIGEMVV+KNALPYLAQRAE+ F RELAREIK QY+VINRI Sbjct: 39 AGQKVLKVSQDKIDRLMDLIGEMVVAKNALPYLAQRAEEVFQQRELAREIKTQYSVINRI 98 Query: 503 AEEMQDAIMQVRMMPVSVVFQRFPRLVRDISRKLGKEVQLVLVGEETEADKNIIEALADP 562 AE+MQ A++QVRM+PV +FQRF RLVRDIS+KLGK+VQLV+ GE+TEADKN+IE+LADP Sbjct: 99 AEDMQHAVLQVRMLPVGTIFQRFGRLVRDISKKLGKDVQLVVEGEDTEADKNVIESLADP 158 Query: 563 LIHIVRNSLDHGLEGPEQRRASGKPALGSLTISAAHEGDQVVIVIEDDGKGIDPALIKRK 622 LIHI+RNSLDHGLE P R A+GKPA G+L ++A EGD+V++ I DDG GID A ++ K Sbjct: 159 LIHILRNSLDHGLELPAARLAAGKPAQGTLRVAARQEGDRVLLDISDDGAGIDTARVRAK 218 Query: 623 AYEKGLIDEAQLERISDQDAVNLVFSSGFSTAEVVSDLSGRGVGMDVVRNAVEKVNGSLA 682 A E+GLI + + +S+ +A LVF GFSTA+ +SDLSGRGVGMDVVR+AVE++NGS+ Sbjct: 219 AVERGLIPADRADSLSEHEAAQLVFLPGFSTADTISDLSGRGVGMDVVRSAVERINGSVT 278 Query: 683 LHSVSGKGTRLQISLPLSMAVTKVMIIESDGQLFGVPMEHVMETVRVPRSSLHFANSSAK 742 L S G+GT ++++LPLSMAVT VM+IE G+ FGVPM+ ++ETVRVP +H + Sbjct: 279 LTSERGRGTTIRLALPLSMAVTNVMMIEVGGRRFGVPMDLIVETVRVPADDIHHFKRAKT 338 Query: 743 MVLRGHILGLKGINQILGIAAEQKTNADGEVAVLVVRVGGQSVGLVIDDFRETVDVIQKP 802 VLRG I+ L+ ++++L + + NA+ E AVLVVR+GG+ +GLV+DDF T D+I KP Sbjct: 339 AVLRGRIVPLRPLHELLALDEAPRLNAEDEHAVLVVRLGGEPIGLVVDDFHGTSDIILKP 398 Query: 803 LLGILGGLSLYSGSALMGDGSVLMVLNTREMF 834 L G+L G++ ++G+ALMGDGSVLM+LN +E+ Sbjct: 399 LEGVLAGITGFAGTALMGDGSVLMILNPKELI 430 >ref|YP_782541.1| CheA signal transduction histidine kinases [Rhodopseudomonas palustris BisA53] gb|ABJ07561.1| CheA signal transduction histidine kinases [Rhodopseudomonas palustris BisA53] Length = 755 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 294/835 (35%), Positives = 460/835 (55%), Gaps = 84/835 (10%) Query: 1 MTLLRDQFIIETRDLLQGISEKLMQLEDAPEHVELLESLFRMVHTLKGNSGLFDVPEMTR 60 M L +QF+IE R+L+ ++ L+ LE V +E +FR HTLKG +G+ ++P M+ Sbjct: 1 MNALHEQFVIEARELIAQATDDLIALERDGAAVARIERVFRAFHTLKGAAGVVELPAMSL 60 Query: 61 VLHACEDLMDAVRRRQVAYSEVLADRLLDAMDFVAMLCDGLEMEAEQADPHAQEAVQIAS 120 VLHA EDL+ A+ ++ S + D L +D V+ DG E + + A +A Sbjct: 61 VLHAAEDLLAAIHDGRLTASRAIIDAALACLDQVSNWVDGFEGKGALPSGAGEGARAMAE 120 Query: 121 SLRQLIGEH--AGVESAVGDLARIGDAQDRGAAIVAAPAAGQALPLRAIPEPLRRQAFAQ 178 LR L+ + A + V D A AA A L A + L R + Sbjct: 121 RLRALLSDTPIAASKPTVSD------------ADAAAVPDWAARLLDAARDQLARTSSKT 168 Query: 179 AQAGGELHWIAYRPSRECFFQGDDPFHRAREVPGFIWGRIDAPAGWPPLAELNAYDCVLH 238 A LH I Y+P CFF GDDP R++PG + +I+ WP L L+ + C L Sbjct: 169 PTA---LHAICYQPLPGCFFTGDDPLGLMRKLPGLLALQIEPREPWPELEVLDPFACNLR 225 Query: 239 FQIVAAASQAELMEYFRYVPDQVELTQLAAQWLAPAPEPAERASAGAHAEPAQDPIDAVM 298 +AA +A L E FR VPDQV +A LA + G+ +P +D + +++ Sbjct: 226 LMAIAATDRAVLDEVFRLVPDQVAFVSIAPDVLA-------QVEVGSAGQP-EDLVRSIL 277 Query: 299 AEIFAIQRQILQSEANMGWQDGRTQAVASTLMNCCRSIGNLELIGELEIARQQSLQLRSC 358 E + ++ S + G GR AVA N R G E + + +++ Sbjct: 278 QE-----QAVVLSASPEGLL-GRIGAVARVAANALRHGGRDEAADRIAAVGRAAVE---- 327 Query: 359 DPLLAWLNANPLPLQRGPAVPAASVESAQAEAVAVEMRQESLPQPEALSRQESPQVQLQP 418 A+P PLQ A AS + Q Sbjct: 328 -------QADPAPLQIAIANALASSATDQGGGTGA------------------------- 355 Query: 419 PAPPLRESLPEESGRAGRRAEESLSGNKSVKVEQVKIDRLMNLIGEMVVSKNALPYLAQR 478 PE +GR SGN+S+++++ +ID L+NL GE+ ++KN +LA++ Sbjct: 356 -------GDPETTGR---------SGNRSLRIDESRIDALVNLAGELTIAKNGFAHLAKQ 399 Query: 479 AEDQFGVRELAREIKAQYAVINRIAEEMQDAIMQVRMMPVSVVFQRFPRLVRDISRKLGK 538 E + G R L I+ ++R+A EM+ AI+Q+RM+PV+ +F+ FPRLVRDIS++LGK Sbjct: 400 LESEIGDRALTDAIRRDVEGLDRLANEMRAAILQLRMVPVAQMFRTFPRLVRDISQRLGK 459 Query: 539 EVQLVLVGEETEADKNIIEALADPLIHIVRNSLDHGLEGPEQRRASGKPALGSLTISAAH 598 +V LV GE TEADK+I++ L +PL+H+VRN+LDHG+E PEQRRA+GKP +LT+ A Sbjct: 460 QVSLVTEGEATEADKSIVDLLFEPLLHLVRNALDHGIELPEQRRAAGKPETATLTLRALR 519 Query: 599 EGDQVVIVIEDDGKGIDPALIKRKAYEKGLIDEAQLERISDQDAVNLVFSSGFSTAEVVS 658 GD++++ + +DG+GIDPAL++ +A E+GL+ +L SD++ V+LVF+ GFSTA ++ Sbjct: 520 LGDRLIVEVHEDGRGIDPALVRARAGERGLLSADELATRSDEEIVDLVFAGGFSTASQLT 579 Query: 659 DLSGRGVGMDVVRNAVEKVNGSLALHSVSGKGTRLQISLPLSMAVTKVMIIESDGQLFGV 718 D+SGRGVGMDVVRN +E+ G ++L S G GT++++ LP+S+A+ ++M++E+ GQ FG+ Sbjct: 580 DISGRGVGMDVVRNTIEQAGGRVSLSSRLGFGTQVRLDLPMSIAMLRIMVVEAGGQRFGI 639 Query: 719 PMEHVMETVRVPRSSLHFANSSAKMVLRGHILGLKGINQILGIAAEQKTNADGEVAVLVV 778 PM+ V +TVR+ + ++ VL ++ + + Q++ + A D + V+V Sbjct: 640 PMDAVSKTVRLTPDRIRRIKANEGFVLDDRVVPICSVAQLMHLPARPGAPQDVRL-VVVA 698 Query: 779 RVGGQSVGLVIDDFRETVDVIQKPLLGILGGLSLYSGSALMGDGSVLMVLNTREM 833 GG+ GL +D R+ ++V+ KPL G+L G S + G+ LMGDG+VL+VL+ +E+ Sbjct: 699 EGGGRIAGLEVDAIRDRLEVVLKPLQGMLAGASSFLGTTLMGDGTVLLVLDLKEV 753