BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0228.p (205 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775122.1| HEAT repeat protein [Herbaspirillum seropedi... 400 e-110 ref|ZP_08822984.1| PBS lyase HEAT domain protein repeat-containi... 222 2e-56 ref|ZP_08781140.1| PBS lyase HEAT domain protein repeat-containi... 216 1e-54 ref|YP_003444411.1| PBS lyase HEAT domain-containing protein rep... 209 2e-52 ref|ZP_08274620.1| HEAT repeat containing protein [Oxalobacterac... 202 3e-50 ref|YP_002909550.1| HEAT repeat containing protein [Burkholderia... 176 2e-42 gb|AEO48854.1| HEAT repeat-containing PBS lyase [Rhodospirillum ... 167 1e-39 ref|YP_427411.1| HEAT repeat-containing PBS lyase [Rhodospirillu... 159 3e-37 ref|ZP_08403369.1| PBS lyase HEAT domain-containing protein repe... 136 2e-30 ref|ZP_06889617.1| PBS lyase heat-like repeat protein [Methylosi... 130 1e-28 >ref|YP_003775122.1| HEAT repeat protein [Herbaspirillum seropedicae SmR1] gb|ADJ63214.1| HEAT repeat protein [Herbaspirillum seropedicae SmR1] Length = 205 Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust. Identities = 204/205 (99%), Positives = 205/205 (100%) Query: 1 MALIKMTHSRLSAEPAADRECNVLMQELYSEEAAVRRAAARDLVACPQASEALLARLKIE 60 MALIK+THSRLSAEPAADRECNVLMQELYSEEAAVRRAAARDLVACPQASEALLARLKIE Sbjct: 1 MALIKVTHSRLSAEPAADRECNVLMQELYSEEAAVRRAAARDLVACPQASEALLARLKIE 60 Query: 61 TLLSVRETIITTLIRLGDAAAAAGLIECLRSDDAALRNEAIEAMKQLPEEVAPLMEQLLD 120 TLLSVRETIITTLIRLGDAAAAAGLIECLRSDDAALRNEAIEAMKQLPEEVAPLMEQLLD Sbjct: 61 TLLSVRETIITTLIRLGDAAAAAGLIECLRSDDAALRNEAIEAMKQLPEEVAPLMEQLLD 120 Query: 121 DVDADVRIFAVNVLESMRHPRVEEWLIEVIRSDPHVNVCSAALDVLSEVGTMRALEAIER 180 DVDADVRIFAVNVLESMRHPRVEEWLIEVIRSDPHVNVCSAALDVLSEVGTMRALEAIER Sbjct: 121 DVDADVRIFAVNVLESMRHPRVEEWLIEVIRSDPHVNVCSAALDVLSEVGTMRALEAIER 180 Query: 181 VQARFADDPYIQFAANLTLARLRQE 205 VQARFADDPYIQFAANLTLARLRQE Sbjct: 181 VQARFADDPYIQFAANLTLARLRQE 205 >ref|ZP_08822984.1| PBS lyase HEAT domain protein repeat-containing protein [Thiorhodococcus drewsii AZ1] gb|EGV31913.1| PBS lyase HEAT domain protein repeat-containing protein [Thiorhodococcus drewsii AZ1] Length = 207 Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 111/184 (60%), Positives = 142/184 (77%) Query: 19 RECNVLMQELYSEEAAVRRAAARDLVACPQASEALLARLKIETLLSVRETIITTLIRLGD 78 R+ + L+ L + E RR AARDL P+AS AL+ R++IET SV + I+T+L RLGD Sbjct: 21 RDLSGLLTALNAAEPMARRWAARDLAEHPEASAALVERMRIETEPSVTQVILTSLTRLGD 80 Query: 79 AAAAAGLIECLRSDDAALRNEAIEAMKQLPEEVAPLMEQLLDDVDADVRIFAVNVLESMR 138 A AGL +CLRS+DA LRN AIEAMKQLP+EVAP+M QLL+D D DVRIFAV+VLES+R Sbjct: 81 EIAVAGLTDCLRSEDAMLRNAAIEAMKQLPDEVAPIMGQLLEDPDPDVRIFAVDVLESLR 140 Query: 139 HPRVEEWLIEVIRSDPHVNVCSAALDVLSEVGTMRALEAIERVQARFADDPYIQFAANLT 198 HPRVE+WLI VI DPHVNVC+ A+D+L E+G+ RA + +++RFAD+PYIQFAA+L Sbjct: 141 HPRVEDWLIRVIAEDPHVNVCATAVDLLGEIGSERAAATLRALKSRFADEPYIQFAADLA 200 Query: 199 LARL 202 L R+ Sbjct: 201 LKRI 204 >ref|ZP_08781140.1| PBS lyase HEAT domain protein repeat-containing protein [Methylobacter tundripaludum SV96] gb|EGW23315.1| PBS lyase HEAT domain protein repeat-containing protein [Methylobacter tundripaludum SV96] Length = 207 Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 109/184 (59%), Positives = 141/184 (76%) Query: 19 RECNVLMQELYSEEAAVRRAAARDLVACPQASEALLARLKIETLLSVRETIITTLIRLGD 78 R+ L EL ++ + RR AARDL P+A+ L+ RLK E SVRE I+TTL RLGD Sbjct: 21 RDFAGLTAELAADNSTARRWAARDLAEFPEAAGILVERLKREEDTSVREAILTTLARLGD 80 Query: 79 AAAAAGLIECLRSDDAALRNEAIEAMKQLPEEVAPLMEQLLDDVDADVRIFAVNVLESMR 138 AA AGL+ECLRS+DA+LRNE IEAMK+LP+EVAP+M +LL+D D DVRIFAVN+LES+ Sbjct: 81 PAAVAGLVECLRSEDASLRNEVIEAMKELPDEVAPIMSELLEDHDPDVRIFAVNILESLC 140 Query: 139 HPRVEEWLIEVIRSDPHVNVCSAALDVLSEVGTMRALEAIERVQARFADDPYIQFAANLT 198 HP+VE WLI VI D HVNVC+ ALD+LSEVGT+ + A+++++ARFAD+PYI F +L Sbjct: 141 HPQVEAWLISVIEKDAHVNVCATALDLLSEVGTLASRPALQQLKARFADEPYIGFTVDLA 200 Query: 199 LARL 202 + R+ Sbjct: 201 IKRI 204 >ref|YP_003444411.1| PBS lyase HEAT domain-containing protein repeat-containing protein [Allochromatium vinosum DSM 180] gb|ADC63379.1| PBS lyase HEAT domain protein repeat-containing protein [Allochromatium vinosum DSM 180] Length = 207 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 108/184 (58%), Positives = 137/184 (74%) Query: 19 RECNVLMQELYSEEAAVRRAAARDLVACPQASEALLARLKIETLLSVRETIITTLIRLGD 78 R+ L+ L ++ RR AARDL P++S AL+ RL IET SV I+T+L +GD Sbjct: 21 RDLPGLLTALADDDPLARRWAARDLAQYPESSRALVERLSIETEPSVTAVILTSLTLIGD 80 Query: 79 AAAAAGLIECLRSDDAALRNEAIEAMKQLPEEVAPLMEQLLDDVDADVRIFAVNVLESMR 138 A AGL ECLRS+DA LRN AIEAMKQLP+EVAP M +LL+D+D DVRIFAV+VLES+R Sbjct: 81 EIAVAGLTECLRSEDAMLRNAAIEAMKQLPDEVAPWMGRLLEDLDPDVRIFAVDVLESLR 140 Query: 139 HPRVEEWLIEVIRSDPHVNVCSAALDVLSEVGTMRALEAIERVQARFADDPYIQFAANLT 198 HP+VE+WLI VI D HVNVC+ A+D+L EVG+ RA A+ ++ RFAD+PYIQFAA+L Sbjct: 141 HPQVEDWLIRVITQDAHVNVCATAVDLLGEVGSERAKPALLALKQRFADEPYIQFAADLA 200 Query: 199 LARL 202 L R+ Sbjct: 201 LKRI 204 >ref|ZP_08274620.1| HEAT repeat containing protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF31905.1| HEAT repeat containing protein [Oxalobacteraceae bacterium IMCC9480] Length = 211 Score = 202 bits (513), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 110/210 (52%), Positives = 149/210 (70%), Gaps = 6/210 (2%) Query: 1 MALIKMT-HSRLSAEP-----AADRECNVLMQELYSEEAAVRRAAARDLVACPQASEALL 54 MA IK + + +AEP +++R+ L+++L + A RR AARDL+ P ++ AL+ Sbjct: 1 MAFIKKSPDAAPAAEPLDTQRSSERDFAGLIEQLDDADPATRRWAARDLLVYPASTAALV 60 Query: 55 ARLKIETLLSVRETIITTLIRLGDAAAAAGLIECLRSDDAALRNEAIEAMKQLPEEVAPL 114 ARLK E SVRE I+T+L RLGD A AGL+E LRS+DA +RNEAIEAMK LP+EVAP+ Sbjct: 61 ARLKREDDRSVREFILTSLTRLGDEIAVAGLVEWLRSEDAVMRNEAIEAMKALPDEVAPI 120 Query: 115 MEQLLDDVDADVRIFAVNVLESMRHPRVEEWLIEVIRSDPHVNVCSAALDVLSEVGTMRA 174 M LL D D DVRI AVNVLES+RHP VE+WLI+VI +D +NVC A+D+L EVG+ A Sbjct: 121 MGGLLSDPDPDVRIMAVNVLESLRHPHVEDWLIDVIDNDSVINVCGTAVDLLGEVGSPAA 180 Query: 175 LEAIERVQARFADDPYIQFAANLTLARLRQ 204 ++ R++ RF +PYI+FA +L L R+ + Sbjct: 181 RASLLRLRERFPGEPYIKFATDLALKRIGE 210 >ref|YP_002909550.1| HEAT repeat containing protein [Burkholderia glumae BGR1] gb|ACR32315.1| HEAT repeat containing protein [Burkholderia glumae BGR1] Length = 202 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 95/156 (60%), Positives = 122/156 (78%) Query: 47 PQASEALLARLKIETLLSVRETIITTLIRLGDAAAAAGLIECLRSDDAALRNEAIEAMKQ 106 P + L+A+L+ E+ SVRETI+ +L+ L D A GL+ CLRS+DAALRN AI AM+Q Sbjct: 44 PDTAAVLVAQLQRESSASVRETIMLSLVHLRDQVALDGLVACLRSEDAALRNAAIAAMQQ 103 Query: 107 LPEEVAPLMEQLLDDVDADVRIFAVNVLESMRHPRVEEWLIEVIRSDPHVNVCSAALDVL 166 LPEEVAPLM +LL D D+DVRIFAVNVLES+RHP VE WL+EVI DPHVNVC+AA+D+L Sbjct: 104 LPEEVAPLMSRLLADPDSDVRIFAVNVLESLRHPSVEAWLLEVIEQDPHVNVCAAAVDLL 163 Query: 167 SEVGTMRALEAIERVQARFADDPYIQFAANLTLARL 202 EVG+ RA ++R+Q RF D+P+I+FAA++ L L Sbjct: 164 GEVGSARARAPLQRLQQRFPDEPFIRFAASIALQGL 199 >gb|AEO48854.1| HEAT repeat-containing PBS lyase [Rhodospirillum rubrum F11] Length = 206 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 92/206 (44%), Positives = 134/206 (65%), Gaps = 1/206 (0%) Query: 1 MALIKMTHSR-LSAEPAADRECNVLMQELYSEEAAVRRAAARDLVACPQASEALLARLKI 59 M L++ +R S+ PA +R L+ +L + RRAAARDL P+A+ AL RL++ Sbjct: 1 MGLVRAETARDGSSGPADNRHLTDLLSDLAAPAPGTRRAAARDLADHPEAAMALCERLEV 60 Query: 60 ETLLSVRETIITTLIRLGDAAAAAGLIECLRSDDAALRNEAIEAMKQLPEEVAPLMEQLL 119 ET SVR I T LI+L A A L LRSDDA LRN AIEA++++P +AP +++LL Sbjct: 61 ETAPSVRAMIFTALIKLQTPAVARRLARFLRSDDAQLRNAAIEALQEMPAAIAPHLQELL 120 Query: 120 DDVDADVRIFAVNVLESMRHPRVEEWLIEVIRSDPHVNVCSAALDVLSEVGTMRALEAIE 179 D D+D+RIFAV +L ++R +WL+EVIR + H+NVCSAA+D L+E+G A+E +E Sbjct: 121 TDDDSDIRIFAVTILGTLRLTCAPDWLVEVIRRESHINVCSAAVDALAEIGGPEAIEDLE 180 Query: 180 RVQARFADDPYIQFAANLTLARLRQE 205 + RF D +++FA T+ R+R + Sbjct: 181 ALLDRFPGDSFMKFAIETTIRRIRGQ 206 >ref|YP_427411.1| HEAT repeat-containing PBS lyase [Rhodospirillum rubrum ATCC 11170] gb|ABC23124.1| PBS lyase HEAT-like repeat [Rhodospirillum rubrum ATCC 11170] Length = 182 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 84/182 (46%), Positives = 122/182 (67%) Query: 24 LMQELYSEEAAVRRAAARDLVACPQASEALLARLKIETLLSVRETIITTLIRLGDAAAAA 83 ++ +L + RRAAARDL P+A+ AL RL++ET SVR I T LI+L A A Sbjct: 1 MLSDLAAPAPGTRRAAARDLADHPEAAMALCERLEVETAPSVRAMIFTALIKLQTPAVAR 60 Query: 84 GLIECLRSDDAALRNEAIEAMKQLPEEVAPLMEQLLDDVDADVRIFAVNVLESMRHPRVE 143 L LRSDDA LRN AIEA++++P +AP +++LL D D+D+RIFAV +L ++R Sbjct: 61 RLARFLRSDDAQLRNAAIEALQEMPAAIAPHLQELLTDDDSDIRIFAVTILGTLRLTCAP 120 Query: 144 EWLIEVIRSDPHVNVCSAALDVLSEVGTMRALEAIERVQARFADDPYIQFAANLTLARLR 203 +WL+EVIR + H+NVCSAA+D L+E+G A+E +E + RF D +++FA T+ R+R Sbjct: 121 DWLVEVIRRESHINVCSAAVDALAEIGGPEAIEDLEALLDRFPGDSFMKFAIETTIRRIR 180 Query: 204 QE 205 + Sbjct: 181 GQ 182 >ref|ZP_08403369.1| PBS lyase HEAT domain-containing protein repeat-containing protein [Rubrivivax benzoatilyticus JA2] gb|EGJ11702.1| PBS lyase HEAT domain-containing protein repeat-containing protein [Rubrivivax benzoatilyticus JA2] Length = 206 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 86/184 (46%), Positives = 119/184 (64%) Query: 19 RECNVLMQELYSEEAAVRRAAARDLVACPQASEALLARLKIETLLSVRETIITTLIRLGD 78 R+ L+ +L S +A RR AARDL PQA AL L E VR + T+L L D Sbjct: 20 RDLPGLLSQLRSADAERRRWAARDLAVHPQAVPALGEALSHEDDAGVRYALFTSLTALAD 79 Query: 79 AAAAAGLIECLRSDDAALRNEAIEAMKQLPEEVAPLMEQLLDDVDADVRIFAVNVLESMR 138 AA+ L+ LR++DA LRN AIEA+ ++P+ V+P +E LL D D DVRIFAVN+L +R Sbjct: 80 AASVDVLLPLLRTEDAGLRNGAIEALAEMPQAVSPRVEALLHDADPDVRIFAVNLLAELR 139 Query: 139 HPRVEEWLIEVIRSDPHVNVCSAALDVLSEVGTMRALEAIERVQARFADDPYIQFAANLT 198 HPRV +WL +V+ DP VNV +AA+D L+E G+ + + A+ ARFA DP++ FAA + Sbjct: 140 HPRVPDWLAQVLAEDPQVNVVAAAIDALAEAGSPQHVPALRAAAARFAADPFVGFAAQMA 199 Query: 199 LARL 202 + R+ Sbjct: 200 IERI 203 >ref|ZP_06889617.1| PBS lyase heat-like repeat protein [Methylosinus trichosporium OB3b] gb|EFH01894.1| PBS lyase heat-like repeat protein [Methylosinus trichosporium OB3b] Length = 210 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 85/207 (41%), Positives = 118/207 (57%), Gaps = 6/207 (2%) Query: 1 MALIKMTHSRLSAEPA----ADRECNVLMQELYSEEAAVRRAAARDLVACPQASEALLAR 56 M + K TH L EP RE L++ + A R AA LVA + + L Sbjct: 1 MPIRKATHEMLD-EPDETVRPSRELGELIRLIQKGAIAQRLDAAHSLVAFGEVAAEALCA 59 Query: 57 LKI-ETLLSVRETIITTLIRLGDAAAAAGLIECLRSDDAALRNEAIEAMKQLPEEVAPLM 115 + E ++R+ I +L R+G G+ LRSDD A+RN A++ +K+LP +VAPLM Sbjct: 60 ALLNEADDALRDAIAVSLARVGGRNVVIGVAPMLRSDDPAIRNIAVDILKELPHDVAPLM 119 Query: 116 EQLLDDVDADVRIFAVNVLESMRHPRVEEWLIEVIRSDPHVNVCSAALDVLSEVGTMRAL 175 E LL D DADVRI VNVL S+RH +VE+WLI V+ D HVNV +AA++ L E+G A Sbjct: 120 ETLLADPDADVRILLVNVLGSLRHAKVEQWLIGVVDRDEHVNVVAAAIEALVEIGGAGAR 179 Query: 176 EAIERVQARFADDPYIQFAANLTLARL 202 A+ R RF+ +P+I F+A L + Sbjct: 180 GALSRAADRFSHEPFIVFSAESALHHI 206