BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0224.p (119 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775118.1| chemotaxis response regulator receiver domai... 236 1e-60 ref|YP_003775385.1| chemotaxis regulator protein [Herbaspirillum... 179 9e-44 ref|YP_003774976.1| chemotaxis regulator protein [Herbaspirillum... 175 2e-42 ref|ZP_08274848.1| Chemotaxis regulator - transmits chemorecepto... 142 2e-32 ref|YP_932964.1| chemotaxis response regulator [Azoarcus sp. BH7... 142 2e-32 ref|YP_283962.1| response regulator receiver [Dechloromonas arom... 137 7e-31 ref|YP_003673861.1| response regulator receiver protein [Methylo... 137 7e-31 ref|YP_003048682.1| response regulator receiver protein [Methylo... 135 2e-30 ref|YP_003775431.1| CheY chemotaxis protein [Herbaspirillum sero... 135 2e-30 ref|YP_002890195.1| response regulator receiver protein [Thauera... 135 2e-30 >ref|YP_003775118.1| chemotaxis response regulator receiver domain-containing protein [Herbaspirillum seropedicae SmR1] gb|ADJ63210.1| chemotaxis response regulator receiver domain protein [Herbaspirillum seropedicae SmR1] Length = 134 Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 118/119 (99%), Positives = 118/119 (99%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPIS VITDWNMPGMDGLGLLKKIRE Sbjct: 16 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISFVITDWNMPGMDGLGLLKKIRE 75 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRRSSMGLQ 119 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRRSSMGLQ Sbjct: 76 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRRSSMGLQ 134 >ref|YP_003775385.1| chemotaxis regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ63477.1| chemotaxis regulator protein [Herbaspirillum seropedicae SmR1] Length = 135 Score = 179 bits (455), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 85/117 (72%), Positives = 100/117 (85%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRI+ GLLKELEY K+ +ADDG+SA KILE+GALP++ V+TDWNMP MDGL LLKKIR Sbjct: 17 MRRIVSGLLKELEYTKIVEADDGSSALKILEAGALPVTFVLTDWNMPVMDGLTLLKKIRA 76 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRRSSMG 117 TP + LPVLM++AEAKKENIV AA++GADGYIVKPFNAATL DKI KIL RR+ + Sbjct: 77 TPSMAHLPVLMITAEAKKENIVEAAQSGADGYIVKPFNAATLKDKIEKILARRAHLA 133 >ref|YP_003774976.1| chemotaxis regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ63068.1| chemotaxis regulator transmits chemoreceptor signals to flagellar motor components protein [Herbaspirillum seropedicae SmR1] Length = 133 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 85/116 (73%), Positives = 97/116 (83%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRI+ GLLKELEY K+ +ADDG+SA KILESGA I+ V+TDWNMP MDGL LLKKIR Sbjct: 17 MRRIVSGLLKELEYTKIVEADDGSSALKILESGASNITFVLTDWNMPVMDGLTLLKKIRS 76 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRRSSM 116 TP L LPVLM++AEAKKENIV+AA+ GADGYIVKPFNA TL +KI KIL RR+ M Sbjct: 77 TPALSHLPVLMITAEAKKENIVMAAQEGADGYIVKPFNATTLKEKIEKILARRAHM 132 >ref|ZP_08274848.1| Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY [Oxalobacteraceae bacterium IMCC9480] gb|EGF31677.1| Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY [Oxalobacteraceae bacterium IMCC9480] Length = 152 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 70/116 (60%), Positives = 89/116 (76%), Gaps = 3/116 (2%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESG---ALPISSVITDWNMPGMDGLGLLKK 57 MRRII GLLKE+ + K+ +A+DG +A ++L+S +PI VITDWNMP MDGL LLK+ Sbjct: 33 MRRIISGLLKEIGHSKIHEAEDGAAALRLLQSAQTHGVPIDFVITDWNMPVMDGLELLKR 92 Query: 58 IRETPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRR 113 IR P L LPVLMV+AE+KKENI+ AA GADGYIVKPF AATL +K+ KI+ ++ Sbjct: 93 IRLDPALNHLPVLMVTAESKKENIIAAAHAGADGYIVKPFTAATLKEKLDKIMLKK 148 >ref|YP_932964.1| chemotaxis response regulator [Azoarcus sp. BH72] emb|CAL94077.1| chemotaxis response regulator [Azoarcus sp. BH72] Length = 133 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 69/112 (61%), Positives = 84/112 (75%), Gaps = 2/112 (1%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRI+ LLKEL Y V +A+DG A + L S P V+TDWNMP MDGL LL+ IR+ Sbjct: 17 MRRIVRNLLKELGYTNVDEAEDGAVALQKLNSA--PFDFVVTDWNMPNMDGLTLLQTIRQ 74 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQR 112 TP+LK LPVLM++AEAKKENI+ AA+ GA GYIVKPF AATL +K+ KI +R Sbjct: 75 TPQLKHLPVLMITAEAKKENIIAAAQAGASGYIVKPFTAATLAEKLEKIFER 126 >ref|YP_283962.1| response regulator receiver [Dechloromonas aromatica RCB] gb|AAZ45492.1| Response regulator receiver [Dechloromonas aromatica RCB] Length = 131 Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 66/112 (58%), Positives = 83/112 (74%), Gaps = 2/112 (1%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRI+ LLKEL Y V +A+DG A + L++G V+TDWNMP MDGL LL+ IR Sbjct: 18 MRRIVRNLLKELGYTNVDEAEDGAIALQKLQAGGFEF--VVTDWNMPNMDGLTLLQTIRA 75 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQR 112 TP LK LPVLM++AEAKKENI+ AA+ GA GYIVKPF A TL +K++KI ++ Sbjct: 76 TPNLKHLPVLMITAEAKKENIIAAAQAGASGYIVKPFTAGTLSEKLNKIFEK 127 >ref|YP_003673861.1| response regulator receiver protein [Methylotenera versatilis 301] gb|ADI29284.1| response regulator receiver protein [Methylotenera versatilis 301] Length = 132 Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 2/117 (1%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRI+ LLKEL Y V +A+DG L+ G V++DWNMP MDGL +L++IR Sbjct: 17 MRRIVRNLLKELGYTNVDEAEDGAVGLSKLKGGGFEF--VVSDWNMPNMDGLTMLQQIRA 74 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRRSSMG 117 P LK LPVLMV+AEAKKENI+ AA+ GA+GY+VKPF AATLD+K+SKI ++ G Sbjct: 75 DPELKHLPVLMVTAEAKKENIIAAAQAGANGYVVKPFTAATLDEKLSKIFEKLEKAG 131 >ref|YP_003048682.1| response regulator receiver protein [Methylotenera mobilis JLW8] gb|ACT48155.1| response regulator receiver protein [Methylotenera mobilis JLW8] Length = 132 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 2/117 (1%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRI+ LLKEL Y V +A+DG +A L+ G V++DWNMP MDGL LL+ IR Sbjct: 17 MRRIVRNLLKELGYTNVDEAEDGVAALSKLKGGGFEF--VVSDWNMPNMDGLTLLQNIRA 74 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRRSSMG 117 L +LPVLMV+AEAKKENI+ AA+ GA+GY+VKPF AATLD+K+SKI ++ G Sbjct: 75 DAELSKLPVLMVTAEAKKENIIAAAQAGANGYVVKPFTAATLDEKLSKIFEKLEKAG 131 >ref|YP_003775431.1| CheY chemotaxis protein [Herbaspirillum seropedicae SmR1] gb|ADJ63523.1| CheY chemotaxis protein [Herbaspirillum seropedicae SmR1] Length = 131 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/117 (56%), Positives = 87/117 (74%), Gaps = 2/117 (1%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRI+ LLKEL Y V +A+DG A + L S V++DWNMP MDGL +L++IR+ Sbjct: 17 MRRIVRNLLKELGYTNVDEAEDGVQALQKLRSDQFDF--VVSDWNMPNMDGLTMLQEIRK 74 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRRSSMG 117 P L +LPVLMV+AEAKKENIV AA+ GA+GY+VKPF AATLD+K+ KI ++ ++ G Sbjct: 75 DPALSKLPVLMVTAEAKKENIVAAAQAGANGYVVKPFTAATLDEKLGKIFEKMAAGG 131 >ref|YP_002890195.1| response regulator receiver protein [Thauera sp. MZ1T] gb|ACR01818.1| response regulator receiver protein [Thauera sp. MZ1T] Length = 132 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/112 (58%), Positives = 83/112 (74%), Gaps = 2/112 (1%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRI+ LLKEL + V +A+DG A + L+S P V+TDWNMP MDGL LL+ IR Sbjct: 17 MRRIVRNLLKELGFANVDEAEDGAVALQKLKSS--PYDFVVTDWNMPNMDGLTLLQSIRR 74 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQR 112 TP LK LPVLM++AEAKKENI+ AA+ GA GY+VKPF AATL +K+ KI ++ Sbjct: 75 TPELKHLPVLMITAEAKKENIIAAAQAGASGYVVKPFTAATLAEKLEKIFEK 126