BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0205.p (300 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775102.1| drug/metabolite transporter (DMT) superfamil... 525 e-147 ref|YP_433712.1| DMT family permease [Hahella chejuensis KCTC 23... 123 4e-26 ref|YP_995646.1| hypothetical protein Veis_0849 [Verminephrobact... 100 5e-19 ref|ZP_08873141.1| hypothetical protein VeAt4_11170 [Verminephro... 97 4e-18 ref|ZP_01074338.1| hypothetical protein MED121_15469 [Marinomona... 91 3e-16 ref|YP_004613842.1| hypothetical protein Mesop_5332 [Mesorhizobi... 89 6e-16 ref|ZP_04680784.1| Hypothetical protein OINT_1001715 [Ochrobactr... 88 2e-15 ref|YP_370953.1| hypothetical protein Bcep18194_B0193 [Burkholde... 87 2e-15 gb|EGW60342.1| protein of unknown function DUF6 transmembrane [D... 86 6e-15 ref|ZP_01306019.1| probable transmembrane protein [Oceanobacter ... 86 9e-15 >ref|YP_003775102.1| drug/metabolite transporter (DMT) superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ63194.1| permease of the drug/metabolite transporter (DMT) superfamily protein [Herbaspirillum seropedicae SmR1] Length = 356 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 290/300 (96%), Positives = 295/300 (98%) Query: 1 VALIWGIQPVISRYGFQHGLTPQDATLVRYLTSGLLMLPYVWRRGLAKACGLGWPRALVL 60 VALIWGIQPVISRYGFQHGLTPQDATLVRYLTSGLLMLPYVWRRGLAKACGL WPRALVL Sbjct: 57 VALIWGIQPVISRYGFQHGLTPQDATLVRYLTSGLLMLPYVWRRGLAKACGLRWPRALVL 116 Query: 61 FLLSGPLFSLVLVGGVNYAPASHGALIHPALTPLFGMAISRFVFRRDERFSLWGTGLLVG 120 FLLSGPLFSLVLVGGVNYAPASHGALIHPALTPLFGMAISRFVFRRDERFSLWGT LLVG Sbjct: 117 FLLSGPLFSLVLVGGVNYAPASHGALIHPALTPLFGMAISRFVFRRDERFSLWGTVLLVG 176 Query: 121 GLLVVGLHGVMAGGSLAPEGAWRGDLLFVLSAFMWAWYLVLNKTWGLPPLDAVAMTQVLS 180 GLLVVGLHGVMAGGSLAPEGAWRGDLLFVLSAFMWAWYLVLNKTWGLPPLDAVAMTQVLS Sbjct: 177 GLLVVGLHGVMAGGSLAPEGAWRGDLLFVLSAFMWAWYLVLNKTWGLPPLDAVAMTQVLS 236 Query: 181 LGWVLAVLPWQGAQTFAKPWAALALQSLYHGVLVSIVSVALFNWVVARLGVKAMMLNALS 240 LGWVLAVLPWQG +TFAKPWAALALQSLYHGVLVSIVSVALFNWVVARLGVKAMMLNALS Sbjct: 237 LGWVLAVLPWQGPETFAKPWAALALQSLYHGVLVSIVSVALFNWVVARLGVKAMMLNALS 296 Query: 241 PLFGVLASAWALREPLPPSMLAGAAALLGALALSLRRPSGNPAAVLSARDEKSGCSGRLR 300 PLFGVLASAWALREPLPPSMLAGAAA++ LALSLRRPSG+PAAVLSARDEKSGCSGRL+ Sbjct: 297 PLFGVLASAWALREPLPPSMLAGAAAIMAGLALSLRRPSGSPAAVLSARDEKSGCSGRLQ 356 >ref|YP_433712.1| DMT family permease [Hahella chejuensis KCTC 2396] gb|ABC29287.1| Permease of the drug/metabolite transporter (DMT) superfamily [Hahella chejuensis KCTC 2396] Length = 307 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 150/290 (51%), Gaps = 12/290 (4%) Query: 2 ALIWGIQPVISRYGFQHGLTPQDATLVRYLTSGLLMLPYVWRRGLAKACGLGWPRALVLF 61 ALIWGI PVISR G Q LT D +R++ +G++ LP+V + GL GL W +AL+L Sbjct: 19 ALIWGIWPVISRLGVQQTLTAYDVAAIRFIVAGVIFLPWVIKSGLG---GLTWRQALILT 75 Query: 62 LLSGPLFSLVLVGGVNYAPASHGALIHPALTPLFGMAISRFVFRRDERFSLW-GTGLLVG 120 +G + L+ VGG+ APASHG +I + LF S + W G L+ Sbjct: 76 TGAGAPYVLISVGGLTLAPASHGGVIISGCSFLFATLGSVLLLGDRPTSQRWIGFVLIAL 135 Query: 121 GLLVVGLHGVMAGGSLAPEGAWRGDLLFVLSAFMWAWYLVLNKTWGLPPLDAVAMTQVLS 180 G+L +G + + S A AW GDL+FVLS F+WA Y + +K + +PP+ A+ VLS Sbjct: 136 GILSIGYRSITS-SSAALADAWIGDLIFVLSGFLWASYTLNSKRYNVPPVMGAAVVSVLS 194 Query: 181 -LGWVLAVLPWQGAQTFAKPWAALALQSLYHGVLVSIVSVALFNWVVARLG-VKAMMLNA 238 L +V A L + F L +Q ++ GVL + +++ + ++ LG +A + + Sbjct: 195 MLLYVPAWLAFGEPHIFQASAQELIVQGVFQGVLAAAIALVCYTKSISILGAAQAAVFTS 254 Query: 239 LSPLFGVLASAWALREPLPPSMLAGAAALLGALALSL-----RRPSGNPA 283 L+P VL L E + G + ++ L SL RR SG A Sbjct: 255 LAPGLAVLFGDLILGETPSSAEYIGVSLVILGLLTSLGLFNWRRASGAVA 304 >ref|YP_995646.1| hypothetical protein Veis_0849 [Verminephrobacter eiseniae EF01-2] gb|ABM56628.1| protein of unknown function DUF6, transmembrane [Verminephrobacter eiseniae EF01-2] Length = 288 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 88/287 (30%), Positives = 135/287 (47%), Gaps = 9/287 (3%) Query: 1 VALIWGIQPVISRYGFQHGLTPQDATLVRYLTSGLLMLPYVWRRGLAKACGLGWPRALVL 60 VALIW V +R+ + L P D T +R+ + + + P + R G +G ++ Sbjct: 7 VALIWSGWSVATRFAMKTELAPADVTFLRFGVAAIFLWPVLLRHGFGFK-RIGRLNVCIM 65 Query: 61 FLLSGPLFSLVLVGGVNYAPASHGALIHPALTPLFGMAISRFVFR-RDERFSLWGTGLLV 119 + +G F ++ G+ +APASH A + + P+F +S FR R R L G ++ Sbjct: 66 LIGAGVPFMMLAATGMRFAPASHVATLMIGMMPIFVALLSALFFRERFSRVQLGGLATVI 125 Query: 120 GGLLVVGLHGVMAGGSLAPEGAWRGDLLFVLSAFMWAWYLVLNKTWGLPPLDAVAMTQVL 179 G +G H ++A G WRGDLLF+ + +A Y V+ + G+ P A A+ V Sbjct: 126 VGAACLGGHALIADRG---AGEWRGDLLFLCAGLCFASYTVVQRRSGISPWHATALVNVG 182 Query: 180 SLGWVLAVLPWQGAQ--TFAKPWAALALQSLYHGVLVSIVSVALFNWVVARLGV-KAMML 236 S V A + W Q F P + L Q GV +IV++ + V RLG +A + Sbjct: 183 S-ALVFAPIYWLFLQPRIFTAPVSDLLFQVFAQGVCAAIVAMFFYAEAVRRLGAPRAAIF 241 Query: 237 NALSPLFGVLASAWALREPLPPSMLAGAAALLGALALSLRRPSGNPA 283 AL+P F VL AL E LAG A ++ + L + PA Sbjct: 242 GALTPAFAVLIGIPALGEIPGGVGLAGIALVMAGVVLVVTGARPRPA 288 >ref|ZP_08873141.1| hypothetical protein VeAt4_11170 [Verminephrobacter sp. At4] Length = 305 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 76/250 (30%), Positives = 125/250 (50%), Gaps = 9/250 (3%) Query: 1 VALIWGIQPVISRYGFQHGLTPQDATLVRYLTSGLLMLPYVWRRGLAKACGLGWPRALVL 60 VALIW V +R+ + L P D T +R+ S L + P + R G +G R ++ Sbjct: 23 VALIWSGWSVATRFAMKTELAPADVTFLRFGVSALFLWPILLRHGFGFQ-RIGIARVCIM 81 Query: 61 FLLSGPLFSLVLVGGVNYAPASHGALIHPALTPLFGMAISRFVFR-RDERFSLWGTGLLV 119 + +G F ++ G+ +APASH A + + P+F +S F+ R R L G +++ Sbjct: 82 LVGAGVPFMMLASVGMRFAPASHAATLMIGMMPIFVAVLSALFFKERFSRMQLCGLAVVM 141 Query: 120 GGLLVVGLHGVMAGGSLAPEGAWRGDLLFVLSAFMWAWYLVLNKTWGLPPLDAVAMTQVL 179 G +G ++ + +G WRGDLLF+ + ++A Y V+ + G+ P A A+ V Sbjct: 142 VGAACMGGQALIVHRA---DGQWRGDLLFLCAGLLFASYTVVQRRSGISPWHATALVNVG 198 Query: 180 SLGWVLAVLPWQGAQ--TFAKPWAALALQSLYHGVLVSIVSVALFNWVVARLGV-KAMML 236 S G + A + + Q FA P L Q G+ V+I+++ + V RLG +A + Sbjct: 199 S-GLIFAPIYFLFLQPGIFAAPVPELLFQVFAQGICVAILAMFFYAEAVRRLGAPRAAIF 257 Query: 237 NALSPLFGVL 246 AL+P VL Sbjct: 258 GALAPALAVL 267 >ref|ZP_01074338.1| hypothetical protein MED121_15469 [Marinomonas sp. MED121] gb|EAQ67339.1| hypothetical protein MED121_15469 [Marinomonas sp. MED121] Length = 311 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 117/234 (50%), Gaps = 13/234 (5%) Query: 2 ALIWGIQPVISRYGFQHGLTPQDATLVRYLTSGLLMLP-YVWRRGLAKACGLGWPRALVL 60 +IW PV+S+ + L P D T++R+ SGL++LP ++ R KA + +VL Sbjct: 19 TVIWAGWPVLSKIATNNQLAPYDITMLRFSISGLILLPLFIMRFARLKAIA---AKGVVL 75 Query: 61 FLLSGPLFSLVLVGGVNYAPASHGALIHPALTPLFGMAISRFVFRRDERFSL---WGTGL 117 +G + L G+ YAP SH ++I P LF S V E+ +L G Sbjct: 76 AFGAGAPYVLFGTSGMAYAPTSHFSIIMPTSMLLFTTLGS--VLWLGEKLTLTRILGISF 133 Query: 118 LVGGLLVVGLHGVMAGGSLAPEGAWRGDLLFVLSAFMWAWYLVLNKTWGLPPLDAVAMTQ 177 ++ G++ VG + + G LA E GD ++++ F+W+ Y +L + W + P DA + Sbjct: 134 IIAGVVFVGANSL---GGLAIEDTLIGDFMYLMCGFLWSIYTLLARYWKINPWDATVLVS 190 Query: 178 VLSLGWVLAVLPWQ-GAQTFAKPWAALALQSLYHGVLVSIVSVALFNWVVARLG 230 ++S+ + +Q G Q A L +Q LY GV SI ++ L++ V LG Sbjct: 191 MVSIVLYMPFYLYQFGGQILAVETDTLIIQGLYQGVFASIGALYLYSKSVTLLG 244 >ref|YP_004613842.1| hypothetical protein Mesop_5332 [Mesorhizobium opportunistum WSM2075] gb|AEH89748.1| protein of unknown function DUF6 transmembrane [Mesorhizobium opportunistum WSM2075] Length = 299 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 118/233 (50%), Gaps = 6/233 (2%) Query: 4 IWGIQPVISRYGFQHGLTPQDATLVRYLTSGLLMLPYVWRRGLAKACGLGWPRALVLFLL 63 I+ +Q V +R+ + LT D +R+ +G + LP +WR G + LGW RAL L +L Sbjct: 24 IYAVQFVAARFSLREHLTVTDMATLRFAGAGAVFLPIIWRNGFQQLKALGWRRALTLAVL 83 Query: 64 SGPLFSLVLVGGVNYAPASHGALIHPALTPLFGMAISRFVFRRDERFSLWGTGLLVGGLL 123 +G + L++ G+ YAPA HGA + PA F +S F+ R +R ++ G ++ GLL Sbjct: 84 AGLPYPLIINWGLIYAPAVHGAALCPASIVFFSFLLSLFLERASQRRTI-GVATIIAGLL 142 Query: 124 VVGLHGVMAGGSLAPEGAWRGDLLFVLSAFMWAWYLVLNKTWGLPPLDAVAMTQVLSLGW 183 + +A GDLLF+ S M++ Y L + W + P+ A A LS Sbjct: 143 L-----FIAPARAGSHEVLLGDLLFIGSGLMFSAYATLVRQWRIDPVTATAAVVFLSCLP 197 Query: 184 VLAVLPWQGAQTFAKPWAALALQSLYHGVLVSIVSVALFNWVVARLGVKAMML 236 + + + + A A +A Q + G+L ++ L+ ++V ++G +A L Sbjct: 198 LPFLTLFAPSGLHAAAGAEIAGQVIIQGLLAGAAAMFLYTYIVGQIGSQAASL 250 >ref|ZP_04680784.1| Hypothetical protein OINT_1001715 [Ochrobactrum intermedium LMG 3301] gb|EEQ96290.1| Hypothetical protein OINT_1001715 [Ochrobactrum intermedium LMG 3301] Length = 327 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 99/295 (33%), Positives = 143/295 (48%), Gaps = 31/295 (10%) Query: 3 LIWGIQPVISRYGFQHGLTPQDATLVRYLTSGLLMLPYVWRRGLA-KACGLGWPRALVLF 61 L+W V++R+GF+ LTP D +R+ +GL++LP V +G + G P VL Sbjct: 50 LVWSGSFVLTRFGFKTALTPFDIIALRFGVAGLVLLPVVLMKGFGLRQLG---PLGFVLL 106 Query: 62 LL-SGPLFSLVLVGGVNYAPASHGALIHP----ALTPLFGMAISRFVFRRDERFSLWGTG 116 +G ++L+ G+ YAPASH A + P A+ + GMA+ + S W Sbjct: 107 ASGAGVPYALLTTCGLQYAPASHAAALIPGLMTAMVAIMGMAL----LKEHLAPSRWSGV 162 Query: 117 LL--VGGLLVVGLHGVMAGGSLAPEGAWRGDLLFVLSAFMWAWYLVLNKTWGLPPLDAVA 174 +L +G +L+ GL + GG PE G L F ++A +WA Y+++ + G+ L A A Sbjct: 163 VLIVIGAMLIAGLSQL--GG---PE--MLGHLFFFVAALVWAIYVMVFRKKGIDGLHATA 215 Query: 175 MTQVLS----LGWVLAVLPWQGAQTFAKPWAALALQSLYHGVLVSIVSVALFNWVVARLG 230 + V S L + LP +G A PW +ALQ Y GVL S V FN V LG Sbjct: 216 IAAVTSAIVYLPIYMIFLP-KGMD--ATPWGDIALQGFYQGVLTSAFGVFAFNRAVVLLG 272 Query: 231 VKA-MMLNALSPLFGVLASAWALREPLPPSMLAGAAALLGALALSLRRPSGNPAA 284 A L+AL P+ L A L +P AA L+ L+L R PAA Sbjct: 273 TAAGAALSALIPVI-TLVLALVLLGEVPGWTDTLAAFLISLGVLALNRKGKKPAA 326 >ref|YP_370953.1| hypothetical protein Bcep18194_B0193 [Burkholderia sp. 383] gb|ABB10309.1| protein of unknown function DUF6, transmembrane [Burkholderia sp. 383] Length = 305 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 91/289 (31%), Positives = 137/289 (47%), Gaps = 36/289 (12%) Query: 2 ALIWGIQPVISRYGFQH-GLTPQDATLVRYLTSGLLMLPYVWRRGLAKACGLGWPRALVL 60 ALIWG PV++R G H L D +R++ SG L+LP + R GL G P ++ L Sbjct: 17 ALIWGGFPVVTRLGVTHSALDAYDIAFIRFVVSGTLLLPVLLRSGL----GTLRPASIAL 72 Query: 61 FLL-SGPLFSLVLVGGVNYAPASHGALIHPALTPLFGMAISRFVFRR--DERFSLWGTGL 117 ++ +G + L + + +AP + ALTP +A++ + R+ ER S Sbjct: 73 MVIGAGAPYILTVAAALGHAPVG-----YFALTPGSMIALTAILGRQVAHERLS------ 121 Query: 118 LVGGLLVVGLHGVMAGGSLAPEGAWRGDL------LFVLSAFMWAWYLVLNKTWGLPPLD 171 V G+ ++AG +LA A RG + LF+L +WA Y V K G L Sbjct: 122 ---AAQVAGIVTILAGIALAASDALRGAIGLPALVLFMLGGLLWAVYNVTTKRAGAGALH 178 Query: 172 AVAMTQVLSLGWVLAVLPW----QGAQTFAKPWAALALQSLYHGVLVSIVSVALFNWVVA 227 A T V+S+G + P +G P AA+A Q++Y GVL+S++++ F+ V Sbjct: 179 A---TAVVSVGSAVLYCPLYLAARGGAVLHAPVAAIATQAIYQGVLMSVLALYCFSQAVV 235 Query: 228 RLG-VKAMMLNALSPLFGVLASAWALREPLPPSMLAGAAALLGALALSL 275 LG AL PL L + L E LAG A + +A+SL Sbjct: 236 ALGPAIGATFAALMPLLATLEAMLLLDERPHAPALAGIAIVTAGMAVSL 284 >gb|EGW60342.1| protein of unknown function DUF6 transmembrane [Dechlorosoma suillum PS] Length = 299 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 86/270 (31%), Positives = 128/270 (47%), Gaps = 25/270 (9%) Query: 4 IWGIQPVISRYGFQHGLTPQDATLVRYLTSGLLMLP-YVWRRGLAKACGLGWPRALVLFL 62 +W ++SR G + LT D T +R+ T+ L++LP ++WRR W R ++L + Sbjct: 19 VWSGFILVSRLGGKSPLTAWDVTALRFGTAALILLPVWLWRR---PRLNFSW-RMVILAV 74 Query: 63 LSGPLFSLVLVGGVNYAPASHGALIHPALTPLFGMAISRFVFRRDERFSLWGTGLLVGGL 122 G + +++ G A+HGA++ P + P ++ V W Sbjct: 75 TGGCGYGVLVYAGFKLTSAAHGAVLLPGMLPFLVALMAWLVLGERPSPQRW--------- 125 Query: 123 LVVGLHGVMAG-GSLAPE------GAWRGDLLFVLSAFMWAWYLVLNKTWGLPPLDAVAM 175 +GL G+ AG LA + G WRGDLL + S+ WA Y VL + W + P DA Sbjct: 126 --LGLVGIAAGIACLATDSFGSSVGDWRGDLLILASSLSWAIYTVLVRRWQVAPWDATLG 183 Query: 176 TQVLSLGWVLAV-LPWQGAQTFAKPWAALALQSLYHGVLVSIVSVALFNWVVARLG-VKA 233 ++S L V + W A + +ALQ+ Y GVL IV++ F VA LG K Sbjct: 184 VGLVSAALYLPVYVLWLPHNLAAASLSTIALQAAYQGVLAVIVAMMFFMRAVAILGPTKV 243 Query: 234 MMLNALSPLFGVLASAWALREPLPPSMLAG 263 L AL P A+A L EPL P ++AG Sbjct: 244 GTLMALIPAVAGTAAAPLLGEPLSPWLMAG 273 >ref|ZP_01306019.1| probable transmembrane protein [Oceanobacter sp. RED65] gb|EAT13209.1| probable transmembrane protein [Oceanobacter sp. RED65] Length = 300 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 79/267 (29%), Positives = 121/267 (45%), Gaps = 14/267 (5%) Query: 3 LIWGIQPVISRYGFQHGLTPQDATLVRYLTSGLLMLPYVWRRGLAKACGLGWPRALVLFL 62 LIW + SR G L D +RY T LL+LP W + + + + + L Sbjct: 18 LIWSGFVLASRQGGLSELNHFDVIALRYGTCALLLLPLWWFK---YRFNVFQTKYIAIAL 74 Query: 63 LSGPLFSLVLVGGVNYAPASHGALIHPALTPLFGMAISRFVFR-RDERFSLWGTGLLVGG 121 + G ++L G APASHGAL+ P PLF ++ V + R E L+G L+ G Sbjct: 75 VGGLAYALCTFQGFQLAPASHGALLLPGTMPLFIFILAVIVGQIRVEAIKLFGIVLISSG 134 Query: 122 LLVVGLHGVMAGGSLAPEGAWRGDLLFVLSAFMWAWYLVLNKTWGLPPLDAVAMTQVLSL 181 + ++ +M G +GD+LF+L A W + +L K W +PP AV +L+ Sbjct: 135 VALLFTQQLMMDGD--NNSVLKGDVLFLLGALCWGVFSILIKHWNIPPWHAVISLALLT- 191 Query: 182 GWVLAVLPW----QGAQTFAKPWAALALQSLYHGVLVSIVSVALFNWVVARLGVKAM-ML 236 L LPW ++ LQ Y G L +IV + + VA LG M L Sbjct: 192 --CLVYLPWYVMFSPKNIDVAGANSILLQMFYQGFLATIVQLYFYGRAVAVLGASGMGSL 249 Query: 237 NALSPLFGVLASAWALREPLPPSMLAG 263 AL P+ +++ + EP+ ++ G Sbjct: 250 MALVPVIAGVSAIFVFDEPVTLYLIVG 276