BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0170.p (366 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775065.1| D-alanyl-D-alanine-endopeptidase [Herbaspiri... 746 0.0 ref|YP_004753687.1| Penicillin-binding protein (D-alanyl-D-alani... 460 e-127 ref|YP_001099134.1| D-alanyl-D-alanine-endopeptidase [Herminiimo... 456 e-126 ref|YP_001352421.1| D-alanyl-D-alanine-endopeptidase [Janthinoba... 446 e-123 emb|CAL61007.2| D-alanyl-D-alanine endopeptidase precursor (DD-e... 445 e-123 ref|ZP_08275375.1| Penicillin-binding protein precursor (D-alany... 404 e-110 gb|ABW82972.1| endopeptidase [uncultured bacterium pEAF66] 387 e-105 ref|ZP_04578200.1| D-alanyl-D-alanine-endopeptidase [Oxalobacter... 362 6e-98 ref|ZP_07677315.1| D-alanyl-D-alanine carboxypeptidase family pr... 358 1e-96 ref|ZP_04576002.1| murein-dd-endopeptidase, serine peptidase, me... 357 1e-96 >ref|YP_003775065.1| D-alanyl-D-alanine-endopeptidase [Herbaspirillum seropedicae SmR1] gb|ADJ63157.1| D-alanyl-D-alanine-endopeptidase (penicillin-binding) protein [Herbaspirillum seropedicae SmR1] Length = 366 Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/366 (100%), Positives = 366/366 (100%) Query: 1 MIKSALAVLTSLLFIHAGLAPAAAQTVNNTAKKPVKKAVAKRAAQPVSRTVAKGSLNNRE 60 MIKSALAVLTSLLFIHAGLAPAAAQTVNNTAKKPVKKAVAKRAAQPVSRTVAKGSLNNRE Sbjct: 1 MIKSALAVLTSLLFIHAGLAPAAAQTVNNTAKKPVKKAVAKRAAQPVSRTVAKGSLNNRE 60 Query: 61 KLVRKVTVVKGKRQVSYQRVSAAPSVPVVPPVMTAGDMAGLNLTPDPLALRSNVALVIDQ 120 KLVRKVTVVKGKRQVSYQRVSAAPSVPVVPPVMTAGDMAGLNLTPDPLALRSNVALVIDQ Sbjct: 61 KLVRKVTVVKGKRQVSYQRVSAAPSVPVVPPVMTAGDMAGLNLTPDPLALRSNVALVIDQ 120 Query: 121 ANSQVLFEKNSGVALPIASVTKLMTALVVVEARQNMEEVLTVTDDDVDREKHSSSRLRVG 180 ANSQVLFEKNSGVALPIASVTKLMTALVVVEARQNMEEVLTVTDDDVDREKHSSSRLRVG Sbjct: 121 ANSQVLFEKNSGVALPIASVTKLMTALVVVEARQNMEEVLTVTDDDVDREKHSSSRLRVG 180 Query: 181 ATLSRDDMLHIALMSSENRAASALGRNYPGGLPAFVAAMNAKARSLGMMDTRYVDSTGLS 240 ATLSRDDMLHIALMSSENRAASALGRNYPGGLPAFVAAMNAKARSLGMMDTRYVDSTGLS Sbjct: 181 ATLSRDDMLHIALMSSENRAASALGRNYPGGLPAFVAAMNAKARSLGMMDTRYVDSTGLS 240 Query: 241 SQNVASARDLAKLVVAAYNYPIIRQYSTDPKYMVEPSGHALQYNSSNRLTSNKEWDIGLQ 300 SQNVASARDLAKLVVAAYNYPIIRQYSTDPKYMVEPSGHALQYNSSNRLTSNKEWDIGLQ Sbjct: 241 SQNVASARDLAKLVVAAYNYPIIRQYSTDPKYMVEPSGHALQYNSSNRLTSNKEWDIGLQ 300 Query: 301 KTGFINEAGHCLVMYTRIEGRPIVMVFLDSKGRLSHVGDAARMRKWLVDDQPSNLTRMKM 360 KTGFINEAGHCLVMYTRIEGRPIVMVFLDSKGRLSHVGDAARMRKWLVDDQPSNLTRMKM Sbjct: 301 KTGFINEAGHCLVMYTRIEGRPIVMVFLDSKGRLSHVGDAARMRKWLVDDQPSNLTRMKM 360 Query: 361 VRADEG 366 VRADEG Sbjct: 361 VRADEG 366 >ref|YP_004753687.1| Penicillin-binding protein (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase) [Collimonas fungivorans Ter331] gb|AEK62864.1| Penicillin-binding protein precursor (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase) [Collimonas fungivorans Ter331] Length = 387 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 238/378 (62%), Positives = 292/378 (77%), Gaps = 18/378 (4%) Query: 1 MIKSALAVLTSLLFI--HAGLAPAAAQTVNNTAKKPVKKAVAKRAAQPVSRTVAKGS--- 55 M KSAL V SL + +A +A A+AQT ++TAKK KK A AA GS Sbjct: 5 MGKSALIVFLSLFLVLANAPVALASAQTKHSTAKKAAKKPAAGTAAASKKAIAKSGSRKR 64 Query: 56 -------------LNNREKLVRKVTVVKGKRQVSYQRVSAAPSVPVVPPVMTAGDMAGLN 102 N EKLV+KV +V G+R+V+YQR++ AP VP +PPV++AG+ AGLN Sbjct: 65 LVISARGRSNTASFNKNEKLVKKVVMVHGRRKVTYQRIAFAPVVPALPPVLSAGEQAGLN 124 Query: 103 LTPDPLALRSNVALVIDQANSQVLFEKNSGVALPIASVTKLMTALVVVEARQNMEEVLTV 162 LT DPL L+S+VALV+DQ +S+VL +KNS +ALPIAS+TKLMT++VVVE++Q+M EVLTV Sbjct: 125 LTRDPLELKSSVALVLDQNSSEVLLDKNSHIALPIASLTKLMTSMVVVESKQDMNEVLTV 184 Query: 163 TDDDVDREKHSSSRLRVGATLSRDDMLHIALMSSENRAASALGRNYPGGLPAFVAAMNAK 222 TDDD+DREKHSSSRLR+G+ L+R DMLHIALMSSENRAASALGR+YPGGLPAFVAAMNAK Sbjct: 185 TDDDIDREKHSSSRLRIGSQLTRADMLHIALMSSENRAASALGRSYPGGLPAFVAAMNAK 244 Query: 223 ARSLGMMDTRYVDSTGLSSQNVASARDLAKLVVAAYNYPIIRQYSTDPKYMVEPSGHALQ 282 AR+LGM +T YVDSTGLS NVASARDL++LV+AAY +P+IRQYSTD KY+VEP G LQ Sbjct: 245 ARALGMTETHYVDSTGLSHLNVASARDLSRLVMAAYQHPVIRQYSTDSKYVVEPGGRPLQ 304 Query: 283 YNSSNRLTSNKEWDIGLQKTGFINEAGHCLVMYTRIEGRPIVMVFLDSKGRLSHVGDAAR 342 Y++SN L N EW IGLQKTG+INEAG C+VM T I+GR IVMVFLDS+G+ S DA R Sbjct: 305 YSTSNHLVENPEWQIGLQKTGYINEAGRCMVMQTTIDGRQIVMVFLDSRGKYSRQADADR 364 Query: 343 MRKWLVDDQPSNLTRMKM 360 +RKWL D P+ LTR+K+ Sbjct: 365 VRKWLADAHPATLTRVKI 382 >ref|YP_001099134.1| D-alanyl-D-alanine-endopeptidase [Herminiimonas arsenicoxydans] Length = 400 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 243/395 (61%), Positives = 290/395 (73%), Gaps = 40/395 (10%) Query: 1 MIKSALAVLTSLLFI-HAGLAPA----------------------AAQTVNNTAKK---- 33 M+KSAL V SLL I HA +A A + N A K Sbjct: 1 MLKSALGVFFSLLVIAHAPVAQAKEPATSSAKKTTAAKAAPAAKRKTASKNTAANKAIGK 60 Query: 34 -----------PVKKAVAKRAAQPVSRTVAKGSLNNREKLVRKVTVVKGKRQVSYQRVSA 82 P K++ AK A+ SRT + SLN+ EKLV+KV V GK++V YQRV A Sbjct: 61 SSASSKRTSSKPAKRSNAKAASGKASRTRS-ASLNSDEKLVKKVVTVNGKKRVIYQRV-A 118 Query: 83 APSVPVVPPVMTAGDMAGLNLTPDPLALRSNVALVIDQANSQVLFEKNSGVALPIASVTK 142 P +P VPPVMTAGD+AGL++T D LAL S+VALVIDQ+ S+VLFEKN+ V LPIAS+TK Sbjct: 119 QPVIPTVPPVMTAGDIAGLSMTRDALALASSVALVIDQSTSEVLFEKNANVTLPIASITK 178 Query: 143 LMTALVVVEARQNMEEVLTVTDDDVDREKHSSSRLRVGATLSRDDMLHIALMSSENRAAS 202 LMT LVVVEA+Q+M E+L VT +D+DREK+SSSRLRVG+ LSR +MLHIALMSSENRAAS Sbjct: 179 LMTGLVVVEAQQDMNEMLEVTAEDIDREKNSSSRLRVGSQLSRANMLHIALMSSENRAAS 238 Query: 203 ALGRNYPGGLPAFVAAMNAKARSLGMMDTRYVDSTGLSSQNVASARDLAKLVVAAYNYPI 262 ALGR+YPGGL AFVA MNAKA+SLGM T YVDSTGLSS NVASARDLAKLVV AYN+PI Sbjct: 239 ALGRHYPGGLRAFVATMNAKAKSLGMRGTHYVDSTGLSSNNVASARDLAKLVVEAYNHPI 298 Query: 263 IRQYSTDPKYMVEPSGHALQYNSSNRLTSNKEWDIGLQKTGFINEAGHCLVMYTRIEGRP 322 +RQYSTD KY+VEP G ALQY +SNRL +N +W+IG+QKTG+I+EAG CLVM T I+ RP Sbjct: 299 LRQYSTDSKYVVEPGGRALQYANSNRLVTNPDWEIGIQKTGYISEAGRCLVMQTNIKERP 358 Query: 323 IVMVFLDSKGRLSHVGDAARMRKWLVDDQPSNLTR 357 IVM+FLDSKG+ S +GDAAR+RKWL +P N+ R Sbjct: 359 IVMIFLDSKGKFSRLGDAARIRKWLETMEPQNVAR 393 >ref|YP_001352421.1| D-alanyl-D-alanine-endopeptidase [Janthinobacterium sp. Marseille] gb|ABR89912.1| D-alanyl-D-alanine-endopeptidase [Janthinobacterium sp. Marseille] Length = 436 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 216/301 (71%), Positives = 256/301 (85%), Gaps = 1/301 (0%) Query: 55 SLNNREKLVRKVTVVKGKRQVSYQRVSAAPSVPVVPPVMTAGDMAGLNLTPDPLALRSNV 114 SLN+ EKLV+K VV+GK++V YQRV A P + VVPPV+TAGD+AGLN+T D LAL SNV Sbjct: 128 SLNSNEKLVKKEVVVRGKKKVIYQRV-AKPVMTVVPPVLTAGDIAGLNMTRDSLALASNV 186 Query: 115 ALVIDQANSQVLFEKNSGVALPIASVTKLMTALVVVEARQNMEEVLTVTDDDVDREKHSS 174 ALV+DQ+ S VLFEKN+ V LPIAS+TKLMT LVVVEA+Q+M E+L VT++D+DREK+SS Sbjct: 187 ALVLDQSTSAVLFEKNANVTLPIASITKLMTGLVVVEAQQDMNEILEVTEEDIDREKNSS 246 Query: 175 SRLRVGATLSRDDMLHIALMSSENRAASALGRNYPGGLPAFVAAMNAKARSLGMMDTRYV 234 SRLRVG+ LSR +MLHIALMSSENRAASALGR+YPGG+ AFVAAMNAKARSLGM T YV Sbjct: 247 SRLRVGSQLSRANMLHIALMSSENRAASALGRHYPGGIRAFVAAMNAKARSLGMNGTHYV 306 Query: 235 DSTGLSSQNVASARDLAKLVVAAYNYPIIRQYSTDPKYMVEPSGHALQYNSSNRLTSNKE 294 DSTGLSS NVASA DLAKLV+AA N+ I+RQYSTD KY+VEP G ALQY +SNRL +N + Sbjct: 307 DSTGLSSNNVASAADLAKLVIAASNHSILRQYSTDTKYVVEPGGRALQYANSNRLVNNPD 366 Query: 295 WDIGLQKTGFINEAGHCLVMYTRIEGRPIVMVFLDSKGRLSHVGDAARMRKWLVDDQPSN 354 W+IG+QKTG+I+EAG CLVM I GRPIVM+FLDSKG+LS +GDAAR+RKWL P N Sbjct: 367 WEIGIQKTGYISEAGRCLVMQANINGRPIVMIFLDSKGKLSRLGDAARIRKWLETQHPQN 426 Query: 355 L 355 + Sbjct: 427 I 427 >emb|CAL61007.2| D-alanyl-D-alanine endopeptidase precursor (DD-endopeptidase) (Penicillin-binding protein 5) (PBP-5) [Herminiimonas arsenicoxydans] Length = 308 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 216/302 (71%), Positives = 257/302 (85%), Gaps = 1/302 (0%) Query: 56 LNNREKLVRKVTVVKGKRQVSYQRVSAAPSVPVVPPVMTAGDMAGLNLTPDPLALRSNVA 115 +N+ EKLV+KV V GK++V YQRV A P +P VPPVMTAGD+AGL++T D LAL S+VA Sbjct: 1 MNSDEKLVKKVVTVNGKKRVIYQRV-AQPVIPTVPPVMTAGDIAGLSMTRDALALASSVA 59 Query: 116 LVIDQANSQVLFEKNSGVALPIASVTKLMTALVVVEARQNMEEVLTVTDDDVDREKHSSS 175 LVIDQ+ S+VLFEKN+ V LPIAS+TKLMT LVVVEA+Q+M E+L VT +D+DREK+SSS Sbjct: 60 LVIDQSTSEVLFEKNANVTLPIASITKLMTGLVVVEAQQDMNEMLEVTAEDIDREKNSSS 119 Query: 176 RLRVGATLSRDDMLHIALMSSENRAASALGRNYPGGLPAFVAAMNAKARSLGMMDTRYVD 235 RLRVG+ LSR +MLHIALMSSENRAASALGR+YPGGL AFVA MNAKA+SLGM T YVD Sbjct: 120 RLRVGSQLSRANMLHIALMSSENRAASALGRHYPGGLRAFVATMNAKAKSLGMRGTHYVD 179 Query: 236 STGLSSQNVASARDLAKLVVAAYNYPIIRQYSTDPKYMVEPSGHALQYNSSNRLTSNKEW 295 STGLSS NVASARDLAKLVV AYN+PI+RQYSTD KY+VEP G ALQY +SNRL +N +W Sbjct: 180 STGLSSNNVASARDLAKLVVEAYNHPILRQYSTDSKYVVEPGGRALQYANSNRLVTNPDW 239 Query: 296 DIGLQKTGFINEAGHCLVMYTRIEGRPIVMVFLDSKGRLSHVGDAARMRKWLVDDQPSNL 355 +IG+QKTG+I+EAG CLVM T I+ RPIVM+FLDSKG+ S +GDAAR+RKWL +P N+ Sbjct: 240 EIGIQKTGYISEAGRCLVMQTNIKERPIVMIFLDSKGKFSRLGDAARIRKWLETMEPQNV 299 Query: 356 TR 357 R Sbjct: 300 AR 301 >ref|ZP_08275375.1| Penicillin-binding protein precursor (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase) [Oxalobacteraceae bacterium IMCC9480] gb|EGF31152.1| Penicillin-binding protein precursor (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase) [Oxalobacteraceae bacterium IMCC9480] Length = 351 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 221/357 (61%), Positives = 261/357 (73%), Gaps = 23/357 (6%) Query: 1 MIKSALAVLTSL-LFIHAGLAPAAAQTVNNTAKKPVKKAVAKRAAQPVSRTVAKGSLNNR 59 M KS +L F+ G T N A KP + A AK+ A+ ++ AK Sbjct: 1 MSKSVFVILLMCSFFLSTG-------TAANAADKPERSASAKKHAK---KSTAK------ 44 Query: 60 EKLVRKVTVVKGKRQVSYQRVSAAPSVPVVPPVMTAGDMAGLNLTPDPLALRSNVALVID 119 K R+ K K VS R + A VV +AGD+AGLNLT D L L+SNVALV+D Sbjct: 45 -KSTRRHAAAKSK-HVSRNRAAIAVVPAVV----SAGDLAGLNLTRDALDLKSNVALVMD 98 Query: 120 QANSQVLFEKNSGVALPIASVTKLMTALVVVEARQNMEEVLTVTDDDVDREKHSSSRLRV 179 Q+NS+VLFEKNS VALPIAS+TKLMT++VVVE+ QNM+E++ VT DD+DREK+SSSRLRV Sbjct: 99 QSNSKVLFEKNSNVALPIASITKLMTSMVVVESNQNMDEMIEVTSDDIDREKNSSSRLRV 158 Query: 180 GATLSRDDMLHIALMSSENRAASALGRNYPGGLPAFVAAMNAKARSLGMMDTRYVDSTGL 239 G+ LSR +MLHIALMSSENRAASALGRNYPGGLPAFV AMNAKA+SLGM DTRYVDSTGL Sbjct: 159 GSILSRSNMLHIALMSSENRAASALGRNYPGGLPAFVGAMNAKAKSLGMNDTRYVDSTGL 218 Query: 240 SSQNVASARDLAKLVVAAYNYPIIRQYSTDPKYMVEPSGHALQYNSSNRLTSNKEWDIGL 299 SS NVASA+DLAKLV+AA + II QYSTD KY+V+P ALQY++SN L N WDI L Sbjct: 219 SSHNVASAQDLAKLVIAARQHQIIGQYSTDTKYVVKPGSGALQYSNSNHLVGNPAWDIDL 278 Query: 300 QKTGFINEAGHCLVMYTRIEGRPIVMVFLDSKGRLSHVGDAARMRKWLVDDQPSNLT 356 QKTG+INEAG C+VM T IEGRPIVMVFLDSKG+ S DA R+RKW+ +P NLT Sbjct: 279 QKTGYINEAGRCMVMLTNIEGRPIVMVFLDSKGKQSRTADAGRIRKWIEALKPENLT 335 >gb|ABW82972.1| endopeptidase [uncultured bacterium pEAF66] Length = 368 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 204/357 (57%), Positives = 253/357 (70%), Gaps = 6/357 (1%) Query: 1 MIKSALAVLTSLLFIHAGLAPAAAQTVNNTAKKPVKKAVAKRAAQPVSR--TVAKGSLNN 58 M K AL V SL+ + PA A + K K A R A+ S Sbjct: 1 MYKLALGVFVSLM---VAITPATAARTDGNVKVSKTKKAAVAKKTRFKRRDVAARASSPP 57 Query: 59 REKLVRKVTVVKGKRQVSYQRVSAAPSVPVVPPVMTAGDMAGLNLTPDPLALRSNVALVI 118 R ++R+ VV GKR+ YQRV A PV P + GD AGLNLT DPL L S+VALV+ Sbjct: 58 RANVIRRTIVVNGKRKTVYQRVMLA-RAPVAAPRPSFGDRAGLNLTRDPLDLASSVALVL 116 Query: 119 DQANSQVLFEKNSGVALPIASVTKLMTALVVVEARQNMEEVLTVTDDDVDREKHSSSRLR 178 DQ +++VLFEKNS +ALPIAS+TKLMT LVVVEA Q+M E+LTVT+DDVD EK +SSRLR Sbjct: 117 DQNSAEVLFEKNSKIALPIASITKLMTGLVVVEANQDMNEILTVTEDDVDHEKWTSSRLR 176 Query: 179 VGATLSRDDMLHIALMSSENRAASALGRNYPGGLPAFVAAMNAKARSLGMMDTRYVDSTG 238 VG+ LSR +LHIALMSSENRAA+ALGRNYPGG+ FV AMNAKAR+LGM DTR+VDS+G Sbjct: 177 VGSQLSRASLLHIALMSSENRAAAALGRNYPGGVAGFVEAMNAKARALGMYDTRFVDSSG 236 Query: 239 LSSQNVASARDLAKLVVAAYNYPIIRQYSTDPKYMVEPSGHALQYNSSNRLTSNKEWDIG 298 LSS+N++SA DLAKL AY+ P++RQ+STDPK +V SG L Y+++N L ++ +WDIG Sbjct: 237 LSSKNISSAHDLAKLAAFAYHQPLLRQFSTDPKSVVAASGRTLNYHNTNYLVASPDWDIG 296 Query: 299 LQKTGFINEAGHCLVMYTRIEGRPIVMVFLDSKGRLSHVGDAARMRKWLVDDQPSNL 355 LQKTGFINEAG CLVM I GR ++MVFLDSKG+ S DA R+++WL +P+ L Sbjct: 297 LQKTGFINEAGRCLVMQAMISGRAVIMVFLDSKGKQSRTADAGRVKRWLEALRPAPL 353 >ref|ZP_04578200.1| D-alanyl-D-alanine-endopeptidase [Oxalobacter formigenes OXCC13] gb|EEO29173.1| D-alanyl-D-alanine-endopeptidase [Oxalobacter formigenes OXCC13] Length = 397 Score = 362 bits (929), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 192/341 (56%), Positives = 242/341 (70%), Gaps = 14/341 (4%) Query: 20 APAAAQTVNNTAKKPV--KKAVAKRAAQPVSRTVAKGSLNNREKLVRKVTVVKGKR---- 73 AP A Q T +K V +KA K A S+ + K+V K V+ +R Sbjct: 52 APVAKQ---KTGQKAVSKQKANVKEARNSKSKKIVTA---RSGKIVSKKLVMHDRRGSHG 105 Query: 74 QVSYQRVSAAPSVPVVPPVMTAGDMAGLNLTPDPLALRSNVALVIDQANSQVLFEKNSGV 133 + +RVS P+ P++ +AGD+AGL TPDPL+LRSN AL++D++ ++LFEKN+ + Sbjct: 106 KAYIRRVSLRPAPPIITR-FSAGDLAGLKNTPDPLSLRSNAALIVDESKLEILFEKNANI 164 Query: 134 ALPIASVTKLMTALVVVEARQNMEEVLTVTDDDVDREKHSSSRLRVGATLSRDDMLHIAL 193 ALP+ASVTKLMTALVVVE+ Q+M E+L +T DDVD KH+ SRL+VG +SR ++LH+AL Sbjct: 165 ALPMASVTKLMTALVVVESMQDMNEILEITQDDVDMLKHTGSRLKVGTRMSRGNLLHLAL 224 Query: 194 MSSENRAASALGRNYPGGLPAFVAAMNAKARSLGMMDTRYVDSTGLSSQNVASARDLAKL 253 MSSENRAA+ALGRNYPGGL FV+AMN KA+ LGM D+ YVDS+GLSS NVASARDLAKL Sbjct: 225 MSSENRAAAALGRNYPGGLKGFVSAMNIKAQVLGMSDSNYVDSSGLSSGNVASARDLAKL 284 Query: 254 VVAAYNYPIIRQYSTDPKYMVEPSGHALQYNSSNRLTSNKEWDIGLQKTGFINEAGHCLV 313 V+AA YPI+R+YSTD Y V+ H LQY S+N L N W I LQKTG+I+EAG CLV Sbjct: 285 VMAASQYPILRKYSTDTHYSVDDGLHQLQYGSTNALVHNPNWQIQLQKTGYISEAGQCLV 344 Query: 314 MYTRIEGRPIVMVFLDSKGRLSHVGDAARMRKWLV-DDQPS 353 M I+GRPIVMVFLDSKG+ S + DA R+R WL QPS Sbjct: 345 MKAIIDGRPIVMVFLDSKGKGSRIADAQRIRNWLTRQQQPS 385 >ref|ZP_07677315.1| D-alanyl-D-alanine carboxypeptidase family protein [Ralstonia sp. 5_7_47FAA] gb|EFP64357.1| D-alanyl-D-alanine carboxypeptidase family protein [Ralstonia sp. 5_7_47FAA] Length = 396 Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 178/286 (62%), Positives = 213/286 (74%), Gaps = 1/286 (0%) Query: 63 VRKVTVVKGKRQVSYQRVSAAP-SVPVVPPVMTAGDMAGLNLTPDPLALRSNVALVIDQA 121 VRKV VKGKR+V A P VP T G+ GL TPD LALRS+VALV+DQ Sbjct: 75 VRKVVTVKGKRRVIMVERGARPVRAAFVPASPTLGEAMGLRATPDALALRSSVALVMDQN 134 Query: 122 NSQVLFEKNSGVALPIASVTKLMTALVVVEARQNMEEVLTVTDDDVDREKHSSSRLRVGA 181 N +VLF+KNS LPIAS+TKLMTALVV +A Q M+E+L +TD+D D E+++ SRLR G Sbjct: 135 NGEVLFQKNSSAVLPIASITKLMTALVVTDAHQPMDELLEITDEDRDYERNTGSRLRFGT 194 Query: 182 TLSRDDMLHIALMSSENRAASALGRNYPGGLPAFVAAMNAKARSLGMMDTRYVDSTGLSS 241 L+R+D+L +ALMSSENRAASALGRNYPGG PAFVAAMN KAR LGM DT YVDS GLSS Sbjct: 195 MLTREDLLLLALMSSENRAASALGRNYPGGRPAFVAAMNRKARELGMNDTHYVDSNGLSS 254 Query: 242 QNVASARDLAKLVVAAYNYPIIRQYSTDPKYMVEPSGHALQYNSSNRLTSNKEWDIGLQK 301 NV+SA+DLAK+V+AAY P+IRQ++T P++ V +G L Y ++NRL EWDIGLQK Sbjct: 255 SNVSSAQDLAKIVMAAYKVPLIRQFTTTPEHTVSANGRTLHYVNTNRLVRGGEWDIGLQK 314 Query: 302 TGFINEAGHCLVMYTRIEGRPIVMVFLDSKGRLSHVGDAARMRKWL 347 TGFINEAG CLVM + GR +VMVFLDS G L+ DA R+R WL Sbjct: 315 TGFINEAGRCLVMQANVHGRNVVMVFLDSAGNLTRFADATRVRNWL 360 >ref|ZP_04576002.1| murein-dd-endopeptidase, serine peptidase, merops family s11 [Oxalobacter formigenes HOxBLS] gb|EEO26964.1| murein-dd-endopeptidase, serine peptidase, merops family s11 [Oxalobacter formigenes HOxBLS] Length = 431 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 187/337 (55%), Positives = 243/337 (72%), Gaps = 8/337 (2%) Query: 23 AAQTVNNTAKKPVKKAVAKRAAQPVSRTVAKGSLNNREKLVRKVTVVKGKR------QVS 76 AA+TV + KK VA++ A P R A+ K K V +R + + Sbjct: 91 AAKTVP-SGKKGKSTPVARQKAVPSKRKNARIVSTRHAKKPSKRVVTLDRRTSHNRSRAA 149 Query: 77 YQRVSAAPSVPVVPPVMTAGDMAGLNLTPDPLALRSNVALVIDQANSQVLFEKNSGVALP 136 Y++VS SVPVVP + GD+AGL T DPL+L+SN ALV+D++N ++LFEKNS +ALP Sbjct: 150 YRKVSLRRSVPVVPR-YSFGDLAGLKNTYDPLSLKSNAALVLDESNLEILFEKNSDIALP 208 Query: 137 IASVTKLMTALVVVEARQNMEEVLTVTDDDVDREKHSSSRLRVGATLSRDDMLHIALMSS 196 +AS+TKLMTALVVVE+ Q+M E+L +T++DVD +KH+SSRLRVG ++R ++LH+ALMSS Sbjct: 209 MASITKLMTALVVVESMQDMNEILEITEEDVDVQKHTSSRLRVGTKMTRANLLHLALMSS 268 Query: 197 ENRAASALGRNYPGGLPAFVAAMNAKARSLGMMDTRYVDSTGLSSQNVASARDLAKLVVA 256 ENRAA+ALGRNYPGG+ AFV AMN KA+ LGM D+RYVDS+GLSS N+ASARDLAKLV+A Sbjct: 269 ENRAAAALGRNYPGGISAFVNAMNIKAQVLGMSDSRYVDSSGLSSGNIASARDLAKLVMA 328 Query: 257 AYNYPIIRQYSTDPKYMVEPSGHALQYNSSNRLTSNKEWDIGLQKTGFINEAGHCLVMYT 316 A YPI+R+YSTD Y ++ + Y ++N L N EW I LQKTG+I+EAG CLVM Sbjct: 329 AAQYPILRKYSTDTYYSIDDGLREMHYGNTNGLVHNPEWHIRLQKTGYISEAGQCLVMQA 388 Query: 317 RIEGRPIVMVFLDSKGRLSHVGDAARMRKWLVDDQPS 353 I GRPIVMVFLDSKG+ + + DA R+R WL + S Sbjct: 389 VINGRPIVMVFLDSKGKGARLADAQRIRSWLTQSETS 425