BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0166.p (316 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775061.1| deacetylase [Herbaspirillum seropedicae SmR1... 645 0.0 ref|YP_004753691.1| Deacetylase [Collimonas fungivorans Ter331] ... 434 e-119 ref|YP_003745518.1| histone deacetylase [Ralstonia solanacearum ... 409 e-112 ref|YP_002981569.1| histone deacetylase superfamily [Ralstonia p... 407 e-111 ref|YP_001899508.1| histone deacetylase superfamily protein [Ral... 406 e-111 ref|YP_002005325.1| histone deacetylase [Cupriavidus taiwanensis... 404 e-111 gb|AEG68982.1| Deacetylase [Ralstonia solanacearum Po82] 402 e-110 ref|YP_725886.1| histone deacetylase family deacetylase [Ralston... 402 e-110 ref|ZP_00942919.1| Deacetylase [Ralstonia solanacearum UW551] >g... 401 e-110 ref|YP_004685237.1| deacetylase histone deacetylase family [Cupr... 400 e-109 >ref|YP_003775061.1| deacetylase [Herbaspirillum seropedicae SmR1] gb|ADJ63153.1| deacetylase protein [Herbaspirillum seropedicae SmR1] Length = 331 Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust. Identities = 315/316 (99%), Positives = 315/316 (99%) Query: 1 VKAYYSDHFVLPLPPGHRFPMVKYRMIREGAARTVPGLEFHEAMPASDGELALAHHPDYI 60 VKAYYSDHFVLPLPPGHRFPMVKYRMIREGAARTVPGLEFHEAMPASDGELALAHHPDYI Sbjct: 16 VKAYYSDHFVLPLPPGHRFPMVKYRMIREGAARTVPGLEFHEAMPASDGELALAHHPDYI 75 Query: 61 GRASRGELTATEQREIGFPWSPEMVERSRRSSGATIAACRAAFSEGVAVNLAGGTHHAYG 120 GRASRGELTA EQREIGFPWSPEMVERSRRSSGATIAACRAAFSEGVAVNLAGGTHHAYG Sbjct: 76 GRASRGELTAAEQREIGFPWSPEMVERSRRSSGATIAACRAAFSEGVAVNLAGGTHHAYG 135 Query: 121 DHGAGFCVFNDAAIAARLMQAERRAARVAIVDLDVHQGNGTAAILARDDSVFTLSLHGQN 180 DHGAGFCVFNDAAIAARLMQAERRAARVAIVDLDVHQGNGTAAILARDDSVFTLSLHGQN Sbjct: 136 DHGAGFCVFNDAAIAARLMQAERRAARVAIVDLDVHQGNGTAAILARDDSVFTLSLHGQN 195 Query: 181 NYPFEKEQSDLDVALPDGVGDEDYLCALQQALATLQQRFAPQLLIYLAGADPHEGDRLGK 240 NYPFEKEQSDLDVALPDGVGDEDYLCALQQALATLQQRFAPQLLIYLAGADPHEGDRLGK Sbjct: 196 NYPFEKEQSDLDVALPDGVGDEDYLCALQQALATLQQRFAPQLLIYLAGADPHEGDRLGK 255 Query: 241 MKLSLAGLAARDQAVFSYAREHEIPVAVTMAGGYGREIEQTVAVHLQTIRLASLHAARWS 300 MKLSLAGLAARDQAVFSYAREHEIPVAVTMAGGYGREIEQTVAVHLQTIRLASLHAARWS Sbjct: 256 MKLSLAGLAARDQAVFSYAREHEIPVAVTMAGGYGREIEQTVAVHLQTIRLASLHAARWS 315 Query: 301 SRQAEPGPAPMMENKK 316 SRQAEPGPAPMMENKK Sbjct: 316 SRQAEPGPAPMMENKK 331 >ref|YP_004753691.1| Deacetylase [Collimonas fungivorans Ter331] gb|AEK62868.1| Deacetylase [Collimonas fungivorans Ter331] Length = 311 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 212/310 (68%), Positives = 246/310 (79%), Gaps = 2/310 (0%) Query: 1 VKAYYSDHFVLPLPPGHRFPMVKYRMIREGAARTVPGLEFHEAMPASDGELALAHHPDYI 60 +KA+YSDHFVLPLP GHRFPM KYR+I E A RT+ ++FHEA SDG LALAHHP YI Sbjct: 1 MKAFYSDHFVLPLPAGHRFPMQKYRLIHEAALRTISDIDFHEAPTTSDGVLALAHHPHYI 60 Query: 61 GRASRGELTATEQREIGFPWSPEMVERSRRSSGATIAACRAAFSEG--VAVNLAGGTHHA 118 S G L + Q+ IGFPW+P+MVERSRRS+GATIAACRAA ++ +AVNLAGGTHHA Sbjct: 61 SAVSAGTLPESVQKAIGFPWTPQMVERSRRSAGATIAACRAALTDPGRIAVNLAGGTHHA 120 Query: 119 YGDHGAGFCVFNDAAIAARLMQAERRAARVAIVDLDVHQGNGTAAILARDDSVFTLSLHG 178 + D GAGFCVFNDAAIAARLMQAERR RVAIVDLDVHQGNGTA+ILA DDSVFTLSLHG Sbjct: 121 FADQGAGFCVFNDAAIAARLMQAERRVQRVAIVDLDVHQGNGTASILANDDSVFTLSLHG 180 Query: 179 QNNYPFEKEQSDLDVALPDGVGDEDYLCALQQALATLQQRFAPQLLIYLAGADPHEGDRL 238 + NYPF+KE+SDLDVAL DG GD+ YL ALQ ALA + +RF+PQL+I+LAGADPHEGDRL Sbjct: 181 ERNYPFDKERSDLDVALADGTGDQAYLSALQDALAAMLERFSPQLIIFLAGADPHEGDRL 240 Query: 239 GKMKLSLAGLAARDQAVFSYAREHEIPVAVTMAGGYGREIEQTVAVHLQTIRLASLHAAR 298 G++KLS GLA RD + A IPVA+ MAGGYG+ I+ TVA+HLQTI LA+ A + Sbjct: 241 GRLKLSFDGLARRDAMLLETAGRRAIPVAIAMAGGYGKNIQDTVAIHLQTISLAAYFARQ 300 Query: 299 WSSRQAEPGP 308 Q P P Sbjct: 301 QGVAQLLPQP 310 >ref|YP_003745518.1| histone deacetylase [Ralstonia solanacearum CFBP2957] emb|CBJ42903.1| Histone deacetylase [Ralstonia solanacearum CFBP2957] Length = 324 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 207/314 (65%), Positives = 235/314 (74%), Gaps = 8/314 (2%) Query: 1 VKAYYSDHFVLPLPPGHRFPMVKYRMIREGAARTVPGLEFHEAMPASDGELALAHHPDYI 60 ++A+Y+DHFVLPLPPGHRFPM KY ++RE A VPGL HEA A D L LAH PDY+ Sbjct: 3 MQAFYTDHFVLPLPPGHRFPMRKYSLLRERIAAEVPGLVLHEAPRAGDDALLLAHAPDYV 62 Query: 61 GRASRGELTATEQREIGFPWSPEMVERSRRSSGATIAACRAAFSEGVAVNLAGGTHHAYG 120 G+L QREIGFPWS MVERSRRS+GAT+AAC AA ++G AVNLAGGTHHAY Sbjct: 63 HAVGAGKLDPARQREIGFPWSSAMVERSRRSAGATMAACEAAMADGTAVNLAGGTHHAYA 122 Query: 121 DHGAGFCVFNDAAIAARLMQAERRAAR------VAIVDLDVHQGNGTAAILARDDSVFTL 174 D G GFCVFNDAAIA+R MQ RR R VAIVDLDVHQGNGTA+IL D SVFTL Sbjct: 123 DKGGGFCVFNDAAIASRWMQ--RRPGRAPEDFPVAIVDLDVHQGNGTASILRDDASVFTL 180 Query: 175 SLHGQNNYPFEKEQSDLDVALPDGVGDEDYLCALQQALATLQQRFAPQLLIYLAGADPHE 234 SLHG+ NYPF KE SDLDV LPDG GD YL AL AL TL RFAP+L+IYLAGADPHE Sbjct: 181 SLHGEKNYPFRKEVSDLDVGLPDGCGDAAYLEALAGALDTLAARFAPRLIIYLAGADPHE 240 Query: 235 GDRLGKMKLSLAGLAARDQAVFSYAREHEIPVAVTMAGGYGREIEQTVAVHLQTIRLASL 294 GDRLG++KL++ GLA RDQ VF +A IP+A+TMAGGYG I+ TVAVH QTI LA+ Sbjct: 241 GDRLGRLKLTMDGLARRDQQVFDFAFLQRIPIAITMAGGYGNNIDDTVAVHAQTIALAAR 300 Query: 295 HAARWSSRQAEPGP 308 HA RW++R P Sbjct: 301 HAVRWAARTGAAAP 314 >ref|YP_002981569.1| histone deacetylase superfamily [Ralstonia pickettii 12D] gb|ACS62897.1| histone deacetylase superfamily [Ralstonia pickettii 12D] Length = 335 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 206/313 (65%), Positives = 235/313 (75%), Gaps = 8/313 (2%) Query: 1 VKAYYSDHFVLPLPPGHRFPMVKYRMIREGAARTVPGLEFHEAMPASDGELALAHHPDYI 60 ++A+Y+DHFVLPLPPGHRFPM KY +R VPGL HEA A D L LAH +Y+ Sbjct: 16 MRAFYTDHFVLPLPPGHRFPMRKYSDLRARVLEDVPGLSMHEAPRADDDALLLAHTTEYV 75 Query: 61 GRASRGELTATEQREIGFPWSPEMVERSRRSSGATIAACRAAFSEGVAVNLAGGTHHAYG 120 S G L QREIGFPWSPEMVERSRRS+GAT+AAC AA ++G+AVNLAGGTHHAY Sbjct: 76 CAVSAGRLDPARQREIGFPWSPEMVERSRRSAGATMAACDAALADGIAVNLAGGTHHAYA 135 Query: 121 DHGAGFCVFNDAAIAARLMQAERRAAR------VAIVDLDVHQGNGTAAILARDDSVFTL 174 D G GFCVFNDAAIA+R +Q R++ R VAIVDLDVHQGNGTA+IL D +VFTL Sbjct: 136 DKGGGFCVFNDAAIASRWIQ--RQSGRTPGDFPVAIVDLDVHQGNGTASILRDDATVFTL 193 Query: 175 SLHGQNNYPFEKEQSDLDVALPDGVGDEDYLCALQQALATLQQRFAPQLLIYLAGADPHE 234 SLHG+ NYPF KE SDLDV L DG GDEDYL AL AL L RF PQL+IYLAGADPHE Sbjct: 194 SLHGEKNYPFRKEASDLDVGLHDGCGDEDYLQALTGALDILAGRFKPQLIIYLAGADPHE 253 Query: 235 GDRLGKMKLSLAGLAARDQAVFSYAREHEIPVAVTMAGGYGREIEQTVAVHLQTIRLASL 294 GDRLG++KL+L GLA RDQ VF +A + IPVAVTMAGGYG I+ TVAVH QTI LA+ Sbjct: 254 GDRLGRLKLTLQGLARRDQEVFDFAYQRRIPVAVTMAGGYGNNIDDTVAVHAQTIALAAR 313 Query: 295 HAARWSSRQAEPG 307 HA RW++R G Sbjct: 314 HAQRWAARDEGAG 326 >ref|YP_001899508.1| histone deacetylase superfamily protein [Ralstonia pickettii 12J] gb|ACD27076.1| histone deacetylase superfamily [Ralstonia pickettii 12J] Length = 334 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 204/309 (66%), Positives = 233/309 (75%), Gaps = 8/309 (2%) Query: 1 VKAYYSDHFVLPLPPGHRFPMVKYRMIREGAARTVPGLEFHEAMPASDGELALAHHPDYI 60 ++A+Y+DHFVLPLPPGHRFPM KY +R VPGL HEA A D L LAH +Y+ Sbjct: 16 MRAFYTDHFVLPLPPGHRFPMRKYSDLRARVLADVPGLSMHEAPRADDDALLLAHTSEYV 75 Query: 61 GRASRGELTATEQREIGFPWSPEMVERSRRSSGATIAACRAAFSEGVAVNLAGGTHHAYG 120 S G L QREIGFPWSPEMVERSRRS+GAT+AAC AA ++G+AVNLAGGTHHAY Sbjct: 76 EAVSAGRLDPARQREIGFPWSPEMVERSRRSAGATMAACEAALADGIAVNLAGGTHHAYA 135 Query: 121 DHGAGFCVFNDAAIAARLMQAERRAAR------VAIVDLDVHQGNGTAAILARDDSVFTL 174 D G GFCVFNDAAIA+R +Q RR R VAIVDLDVHQGNGTA+IL D +VFTL Sbjct: 136 DKGGGFCVFNDAAIASRWIQ--RRPGRTPANFPVAIVDLDVHQGNGTASILRDDAAVFTL 193 Query: 175 SLHGQNNYPFEKEQSDLDVALPDGVGDEDYLCALQQALATLQQRFAPQLLIYLAGADPHE 234 SLHG+ NYPF KE SDLD+ L DG GDEDYL AL AL L RF PQL+IYLAGADPHE Sbjct: 194 SLHGEKNYPFRKEASDLDIGLHDGCGDEDYLQALTGALDILAGRFKPQLIIYLAGADPHE 253 Query: 235 GDRLGKMKLSLAGLAARDQAVFSYAREHEIPVAVTMAGGYGREIEQTVAVHLQTIRLASL 294 GDRLG++KL+L GLA RDQ VF +A + IP+AVTMAGGYG I+ TVAVH QTI LA+ Sbjct: 254 GDRLGRLKLTLQGLARRDQEVFDFAYQRRIPIAVTMAGGYGNNIDDTVAVHAQTIALAAR 313 Query: 295 HAARWSSRQ 303 HA RW++R Sbjct: 314 HAQRWAARD 322 >ref|YP_002005325.1| histone deacetylase [Cupriavidus taiwanensis LMG 19424] emb|CAQ69258.1| Histone deacetylase [Cupriavidus taiwanensis LMG 19424] Length = 314 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 202/305 (66%), Positives = 232/305 (76%) Query: 3 AYYSDHFVLPLPPGHRFPMVKYRMIREGAARTVPGLEFHEAMPASDGELALAHHPDYIGR 62 A+Y+DHFVLPLPPGHRFPM KY M+R+ + VPGL EA A D L LAH +Y+ Sbjct: 3 AFYADHFVLPLPPGHRFPMRKYSMLRDAVSAQVPGLRLSEAPRAGDDALLLAHTAEYVEA 62 Query: 63 ASRGELTATEQREIGFPWSPEMVERSRRSSGATIAACRAAFSEGVAVNLAGGTHHAYGDH 122 AS G L A QREIGFPWS MVERSRRS+GATI ACR+A EG+AVNLAGGTHHAY D Sbjct: 63 ASAGTLDAARQREIGFPWSEAMVERSRRSAGATIEACRSALREGIAVNLAGGTHHAYADK 122 Query: 123 GAGFCVFNDAAIAARLMQAERRAARVAIVDLDVHQGNGTAAILARDDSVFTLSLHGQNNY 182 G GFCVFNDAAIAAR++Q + RVA++DLDVHQGNGTA+IL D SVFTLSLHG+ NY Sbjct: 123 GGGFCVFNDAAIAARVLQRDGAVRRVAVIDLDVHQGNGTASILHGDPSVFTLSLHGEKNY 182 Query: 183 PFEKEQSDLDVALPDGVGDEDYLCALQQALATLQQRFAPQLLIYLAGADPHEGDRLGKMK 242 PF KE SDLDV LPDG DE Y ALQ AL TL RF P LLIYLAGADPHEGDRLG++K Sbjct: 183 PFRKEASDLDVGLPDGCDDETYAQALQAALDTLFSRFEPDLLIYLAGADPHEGDRLGRLK 242 Query: 243 LSLAGLAARDQAVFSYAREHEIPVAVTMAGGYGREIEQTVAVHLQTIRLASLHAARWSSR 302 L++AGLA RD VF A+ +PVAVTMAGGYG +IE TVAVH QT+RLA+ + A++ + Sbjct: 243 LTMAGLARRDGLVFDAAQARRLPVAVTMAGGYGNQIEDTVAVHAQTVRLAAQYHAQYHAL 302 Query: 303 QAEPG 307 A G Sbjct: 303 YARVG 307 >gb|AEG68982.1| Deacetylase [Ralstonia solanacearum Po82] Length = 324 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 208/314 (66%), Positives = 235/314 (74%), Gaps = 8/314 (2%) Query: 1 VKAYYSDHFVLPLPPGHRFPMVKYRMIREGAARTVPGLEFHEAMPASDGELALAHHPDYI 60 ++A+Y+DHFVLPLPPGHRFPM KY ++RE A VPGL HEA A D L LAH PDYI Sbjct: 3 MQAFYTDHFVLPLPPGHRFPMRKYSLLRERIAAEVPGLVLHEAPRAGDDALLLAHAPDYI 62 Query: 61 GRASRGELTATEQREIGFPWSPEMVERSRRSSGATIAACRAAFSEGVAVNLAGGTHHAYG 120 G+L QREIGFPWSP MVERSRRS+GAT+AAC AA ++G+AVNLAGGTHHAY Sbjct: 63 DAVGAGKLDPARQREIGFPWSPAMVERSRRSAGATMAACEAAMADGIAVNLAGGTHHAYA 122 Query: 121 DHGAGFCVFNDAAIAARLMQAERRAAR------VAIVDLDVHQGNGTAAILARDDSVFTL 174 D G GFCVFNDAAIAAR MQ RR R VAIVDLDVHQGNGTA+IL D SVFTL Sbjct: 123 DKGGGFCVFNDAAIAARWMQ--RRPGRAPEDFPVAIVDLDVHQGNGTASILRDDASVFTL 180 Query: 175 SLHGQNNYPFEKEQSDLDVALPDGVGDEDYLCALQQALATLQQRFAPQLLIYLAGADPHE 234 S+HG+ NYPF KE SDLDV LPDG GD YL AL AL L RFAP L+IYLAGADPHE Sbjct: 181 SVHGEKNYPFRKEASDLDVGLPDGCGDAAYLEALAGALDALAARFAPCLIIYLAGADPHE 240 Query: 235 GDRLGKMKLSLAGLAARDQAVFSYAREHEIPVAVTMAGGYGREIEQTVAVHLQTIRLASL 294 GDRLG++KL++ GLA RDQ VF +A IP+A+TMAGGYG I+ TVAVH QTI LA+ Sbjct: 241 GDRLGRLKLTMDGLARRDQQVFDFAFLQRIPIAITMAGGYGNNIDDTVAVHAQTIALAAR 300 Query: 295 HAARWSSRQAEPGP 308 HA RW++R P Sbjct: 301 HAVRWAARTGAAAP 314 >ref|YP_725886.1| histone deacetylase family deacetylase [Ralstonia eutropha H16] emb|CAJ92518.1| Deacetylase, histone deacetylase family [Ralstonia eutropha H16] Length = 369 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 200/296 (67%), Positives = 227/296 (76%) Query: 3 AYYSDHFVLPLPPGHRFPMVKYRMIREGAARTVPGLEFHEAMPASDGELALAHHPDYIGR 62 A+Y+DHFVLPLPPGHRFPM KY M+R+ A VPGL EA A D L LAH P Y+ Sbjct: 66 AFYADHFVLPLPPGHRFPMRKYSMLRDAVAAQVPGLRLVEAPRAGDDALLLAHTPGYVQA 125 Query: 63 ASRGELTATEQREIGFPWSPEMVERSRRSSGATIAACRAAFSEGVAVNLAGGTHHAYGDH 122 AS G L A QREIGFPWS MVERSRRS+GATI ACR A EG+AVNLAGGTHHAY D Sbjct: 126 ASAGTLDAARQREIGFPWSEAMVERSRRSAGATIEACRTALREGIAVNLAGGTHHAYADK 185 Query: 123 GAGFCVFNDAAIAARLMQAERRAARVAIVDLDVHQGNGTAAILARDDSVFTLSLHGQNNY 182 G GFCVFNDAAIAAR++Q + RVA+VDLDVHQGNGTA+IL D SVFTLSLHG+ NY Sbjct: 186 GGGFCVFNDAAIAARVLQRDGAVRRVAVVDLDVHQGNGTASILQGDPSVFTLSLHGEKNY 245 Query: 183 PFEKEQSDLDVALPDGVGDEDYLCALQQALATLQQRFAPQLLIYLAGADPHEGDRLGKMK 242 PF KE SDLDV LPDG D+ Y ALQ AL TL RF P+L+IYLAGADPHEGDRLG+++ Sbjct: 246 PFRKEASDLDVGLPDGCDDDTYAQALQAALDTLFSRFDPELIIYLAGADPHEGDRLGRLR 305 Query: 243 LSLAGLAARDQAVFSYAREHEIPVAVTMAGGYGREIEQTVAVHLQTIRLASLHAAR 298 L+LAGLA RD+ VF A ++PVAV MAGGYG +IE TVAVH QT+ LA+ + AR Sbjct: 306 LTLAGLARRDRLVFDAAHARQLPVAVAMAGGYGNQIEDTVAVHAQTVSLAAQYHAR 361 >ref|ZP_00942919.1| Deacetylase [Ralstonia solanacearum UW551] gb|EAP74673.1| Deacetylase [Ralstonia solanacearum UW551] Length = 324 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/314 (65%), Positives = 235/314 (74%), Gaps = 8/314 (2%) Query: 1 VKAYYSDHFVLPLPPGHRFPMVKYRMIREGAARTVPGLEFHEAMPASDGELALAHHPDYI 60 ++A+Y+DHFVLPLPPGHRFPM KY ++RE VPGL HEA A D L LAH PDYI Sbjct: 3 MQAFYTDHFVLPLPPGHRFPMRKYSLLRERIEAEVPGLVLHEAPRAGDDALLLAHAPDYI 62 Query: 61 GRASRGELTATEQREIGFPWSPEMVERSRRSSGATIAACRAAFSEGVAVNLAGGTHHAYG 120 G+L QREIGFPWSP MVERSRRS+GAT+AAC AA ++G+AVNLAGGTHHAY Sbjct: 63 DAVGAGKLDPARQREIGFPWSPAMVERSRRSAGATMAACEAAMADGIAVNLAGGTHHAYA 122 Query: 121 DHGAGFCVFNDAAIAARLMQAERRAAR------VAIVDLDVHQGNGTAAILARDDSVFTL 174 D G GFCVFNDAAIAAR MQ RR R VAIVDLDVHQGNGTA+IL D SVFTL Sbjct: 123 DKGGGFCVFNDAAIAARWMQ--RRPGRAPGDFPVAIVDLDVHQGNGTASILRDDASVFTL 180 Query: 175 SLHGQNNYPFEKEQSDLDVALPDGVGDEDYLCALQQALATLQQRFAPQLLIYLAGADPHE 234 S+HG+ NYPF KE SDLDV LPDG GD YL AL AL L RFAP+L+IYLAGADPHE Sbjct: 181 SVHGEKNYPFRKEASDLDVGLPDGCGDAAYLEALAGALDALAARFAPRLIIYLAGADPHE 240 Query: 235 GDRLGKMKLSLAGLAARDQAVFSYAREHEIPVAVTMAGGYGREIEQTVAVHLQTIRLASL 294 GDRLG++KL++ GLA RDQ VF +A IP+A+TMAGGYG I+ TVAVH QTI LA+ Sbjct: 241 GDRLGRLKLTMDGLARRDQQVFDFAFLQRIPIAITMAGGYGNNIDDTVAVHAQTIALAAW 300 Query: 295 HAARWSSRQAEPGP 308 HA RW++R P Sbjct: 301 HAVRWAARTGAAAP 314 >ref|YP_004685237.1| deacetylase histone deacetylase family [Cupriavidus necator N-1] gb|AEI76756.1| deacetylase histone deacetylase family [Cupriavidus necator N-1] Length = 352 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 201/296 (67%), Positives = 227/296 (76%) Query: 3 AYYSDHFVLPLPPGHRFPMVKYRMIREGAARTVPGLEFHEAMPASDGELALAHHPDYIGR 62 A+Y+DHFVLPLPPGHRFPM KY M+R+ A VPGL EA A D L LAH P Y+ Sbjct: 49 AFYADHFVLPLPPGHRFPMRKYSMLRDAVAAQVPGLRLVEAPRAGDDALLLAHTPGYVQA 108 Query: 63 ASRGELTATEQREIGFPWSPEMVERSRRSSGATIAACRAAFSEGVAVNLAGGTHHAYGDH 122 AS G L A QREIGFPWS MVERSRRS+GATI ACR A EGVAVNLAGGTHHAY D Sbjct: 109 ASTGTLDAARQREIGFPWSEAMVERSRRSAGATIEACRTALREGVAVNLAGGTHHAYADK 168 Query: 123 GAGFCVFNDAAIAARLMQAERRAARVAIVDLDVHQGNGTAAILARDDSVFTLSLHGQNNY 182 G GFCVFNDAAIAAR++Q + RVA+VDLDVHQGNGTA+IL D SVFTLSLHG+ NY Sbjct: 169 GGGFCVFNDAAIAARVLQRDGAVRRVAVVDLDVHQGNGTASILQGDPSVFTLSLHGEKNY 228 Query: 183 PFEKEQSDLDVALPDGVGDEDYLCALQQALATLQQRFAPQLLIYLAGADPHEGDRLGKMK 242 PF KE S+LDV LPDG D+ Y ALQ AL TL RF P+LLIYLAGADPHEGDRLG+++ Sbjct: 229 PFRKEASNLDVGLPDGCDDDTYAQALQAALDTLFSRFDPELLIYLAGADPHEGDRLGRLR 288 Query: 243 LSLAGLAARDQAVFSYAREHEIPVAVTMAGGYGREIEQTVAVHLQTIRLASLHAAR 298 L+LAGLA RD+ VF A ++PVAV MAGGYG +IE TVAVH QT+ LA+ + AR Sbjct: 289 LTLAGLARRDRLVFDAAHARQLPVAVAMAGGYGNQIEDTVAVHAQTVSLAAQYHAR 344