BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0151.p (85 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775047.1| ferredoxin protein [Herbaspirillum seropedic... 174 4e-42 ref|YP_001099122.1| 7-Fe ferredoxin [Herminiimonas arsenicoxydan... 165 2e-39 ref|YP_727042.1| ferredoxin [Ralstonia eutropha H16] >gi|1135273... 162 1e-38 ref|YP_296493.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralston... 162 1e-38 ref|YP_584597.1| Ferredoxin [Cupriavidus metallidurans CH34] >gi... 162 2e-38 ref|YP_002006093.1| ferredoxin [Cupriavidus taiwanensis LMG 1942... 161 2e-38 ref|YP_001352409.1| ferredoxin [Janthinobacterium sp. Marseille]... 154 4e-36 ref|YP_004028426.1| Ferredoxin [Burkholderia rhizoxinica HKI 454... 150 9e-35 ref|YP_003752901.1| ferredoxin (fdxA) [Ralstonia solanacearum PS... 149 1e-34 ref|YP_559948.1| putative ferredoxin [Burkholderia xenovorans LB... 149 1e-34 >ref|YP_003775047.1| ferredoxin protein [Herbaspirillum seropedicae SmR1] gb|ADJ63139.1| ferredoxin protein [Herbaspirillum seropedicae SmR1] Length = 107 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 85/85 (100%), Positives = 85/85 (100%) Query: 1 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNAELSRSWPSI 60 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNAELSRSWPSI Sbjct: 23 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNAELSRSWPSI 82 Query: 61 TKTKAPLPEAEEWKDKTDKLQYLQR 85 TKTKAPLPEAEEWKDKTDKLQYLQR Sbjct: 83 TKTKAPLPEAEEWKDKTDKLQYLQR 107 >ref|YP_001099122.1| 7-Fe ferredoxin [Herminiimonas arsenicoxydans] emb|CAL60995.1| Ferredoxin-1 (Ferredoxin I) (FdI) [Herminiimonas arsenicoxydans] Length = 107 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 78/85 (91%), Positives = 82/85 (96%) Query: 1 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNAELSRSWPSI 60 VDCFREGPNFL+IDPDECIDCAVCVAECPVNAIYAEEDVPADQQ YI LN ELSR+WPSI Sbjct: 23 VDCFREGPNFLSIDPDECIDCAVCVAECPVNAIYAEEDVPADQQHYIKLNVELSRNWPSI 82 Query: 61 TKTKAPLPEAEEWKDKTDKLQYLQR 85 TKTKAPLPEAEEWKDKTDKLQ+L+R Sbjct: 83 TKTKAPLPEAEEWKDKTDKLQFLKR 107 >ref|YP_727042.1| ferredoxin [Ralstonia eutropha H16] emb|CAJ93674.1| Ferredoxin [Ralstonia eutropha H16] Length = 107 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 78/85 (91%), Positives = 81/85 (95%) Query: 1 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNAELSRSWPSI 60 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVP DQQQ+I LNAEL+R+WPSI Sbjct: 23 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPGDQQQFINLNAELARNWPSI 82 Query: 61 TKTKAPLPEAEEWKDKTDKLQYLQR 85 TKTKAPL EAEEWKD TDKLQYLQR Sbjct: 83 TKTKAPLAEAEEWKDATDKLQYLQR 107 >ref|YP_296493.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] ref|YP_004686274.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Cupriavidus necator N-1] gb|AAZ61649.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Ralstonia eutropha JMP134] gb|AEI77793.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Cupriavidus necator N-1] Length = 107 Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 78/85 (91%), Positives = 81/85 (95%) Query: 1 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNAELSRSWPSI 60 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVP DQQQ+I LNAEL+R+WPSI Sbjct: 23 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPGDQQQFIDLNAELARNWPSI 82 Query: 61 TKTKAPLPEAEEWKDKTDKLQYLQR 85 TKTKAPL EAEEWKD TDKLQYLQR Sbjct: 83 TKTKAPLAEAEEWKDATDKLQYLQR 107 >ref|YP_584597.1| Ferredoxin [Cupriavidus metallidurans CH34] gb|ABF09328.1| Ferredoxin [Cupriavidus metallidurans CH34] Length = 107 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 78/85 (91%), Positives = 80/85 (94%) Query: 1 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNAELSRSWPSI 60 VDCFREGPNFL+IDPDECIDCAVCVAECPVNAIYAEEDVP DQQQ+I LNAELSR WPSI Sbjct: 23 VDCFREGPNFLSIDPDECIDCAVCVAECPVNAIYAEEDVPGDQQQFIELNAELSRIWPSI 82 Query: 61 TKTKAPLPEAEEWKDKTDKLQYLQR 85 TKTKAPL EAEEWKD TDKLQYLQR Sbjct: 83 TKTKAPLAEAEEWKDATDKLQYLQR 107 >ref|YP_002006093.1| ferredoxin [Cupriavidus taiwanensis LMG 19424] emb|CAQ70030.1| putative FERREDOXIN PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 107 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 77/85 (90%), Positives = 81/85 (95%) Query: 1 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNAELSRSWPSI 60 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVP DQQQ+I LNAEL+R+WPSI Sbjct: 23 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPGDQQQFIELNAELARAWPSI 82 Query: 61 TKTKAPLPEAEEWKDKTDKLQYLQR 85 TKTKAPL EAEEWKD TDKLQYL+R Sbjct: 83 TKTKAPLAEAEEWKDATDKLQYLER 107 >ref|YP_001352409.1| ferredoxin [Janthinobacterium sp. Marseille] gb|ABR91150.1| ferredoxin [Janthinobacterium sp. Marseille] Length = 107 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 73/85 (85%), Positives = 78/85 (91%) Query: 1 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNAELSRSWPSI 60 VDCFREGPNFL+IDPDECIDCAVCVAECPVNAI+AEEDVPADQQ +I LN +LSR WPSI Sbjct: 23 VDCFREGPNFLSIDPDECIDCAVCVAECPVNAIFAEEDVPADQQVFIKLNVDLSREWPSI 82 Query: 61 TKTKAPLPEAEEWKDKTDKLQYLQR 85 TKTK P+ EAEEWKDKTDKLQYL R Sbjct: 83 TKTKPPMAEAEEWKDKTDKLQYLAR 107 >ref|YP_004028426.1| Ferredoxin [Burkholderia rhizoxinica HKI 454] emb|CBW74282.1| Ferredoxin [Burkholderia rhizoxinica HKI 454] Length = 131 Score = 150 bits (378), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 70/85 (82%), Positives = 77/85 (90%) Query: 1 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNAELSRSWPSI 60 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVP DQQQ+I LNAEL++ WPSI Sbjct: 47 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPGDQQQFIQLNAELAKDWPSI 106 Query: 61 TKTKAPLPEAEEWKDKTDKLQYLQR 85 T+TK PLP+A EWKD DKL+ L+R Sbjct: 107 TRTKPPLPDAVEWKDVKDKLKLLER 131 >ref|YP_003752901.1| ferredoxin (fdxA) [Ralstonia solanacearum PSI07] emb|CBJ51626.1| Ferredoxin (fdxA) [Ralstonia solanacearum PSI07] emb|CCA79287.1| ferredoxin (fdxA) [blood disease bacterium R229] emb|CCA86046.1| ferredoxin (fdxA) [Ralstonia syzygii R24] Length = 108 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 73/86 (84%), Positives = 81/86 (94%), Gaps = 1/86 (1%) Query: 1 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNAELSRS-WPS 59 VDCFREGPNFL IDPDECIDCAVCVAECPVNAIYAEEDVPADQQ++IA+NAEL++S WPS Sbjct: 23 VDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEEDVPADQQKWIAINAELAQSGWPS 82 Query: 60 ITKTKAPLPEAEEWKDKTDKLQYLQR 85 ITKTK+PLP+AEEWKD DK QYL+R Sbjct: 83 ITKTKSPLPDAEEWKDVKDKEQYLER 108 >ref|YP_559948.1| putative ferredoxin [Burkholderia xenovorans LB400] ref|ZP_06841100.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. Ch1-1] gb|ABE31896.1| Putative ferredoxin [Burkholderia xenovorans LB400] gb|EFG71390.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. Ch1-1] Length = 107 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 71/85 (83%), Positives = 78/85 (91%) Query: 1 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNAELSRSWPSI 60 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVP DQQ +I LNA+L++SWPSI Sbjct: 23 VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPGDQQNFIELNADLAKSWPSI 82 Query: 61 TKTKAPLPEAEEWKDKTDKLQYLQR 85 TKTKAPLPEA+E+KD DKL+ L R Sbjct: 83 TKTKAPLPEADEFKDVKDKLELLVR 107