BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0124.p (278 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775009.1| hypothetical protein Hsero_1588 [Herbaspiril... 474 e-132 ref|YP_001889688.1| hypothetical protein Bphyt_5984 [Burkholderi... 223 3e-56 ref|YP_001857442.1| hypothetical protein Bphy_1212 [Burkholderia... 222 5e-56 ref|ZP_03270217.1| hypothetical protein BH160DRAFT_6496 [Burkhol... 221 8e-56 ref|YP_003606960.1| hypothetical protein BC1002_3415 [Burkholder... 220 2e-55 ref|ZP_06844095.1| conserved hypothetical protein [Burkholderia ... 213 2e-53 ref|YP_553117.1| hypothetical protein Bxe_B2219 [Burkholderia xe... 183 3e-44 ref|YP_004754041.1| integral membrane protein [Collimonas fungiv... 153 3e-35 ref|YP_003093553.1| hypothetical protein Phep_3297 [Pedobacter h... 147 3e-33 ref|ZP_03698033.1| conserved hypothetical protein [Lutiella nitr... 132 6e-29 >ref|YP_003775009.1| hypothetical protein Hsero_1588 [Herbaspirillum seropedicae SmR1] gb|ADJ63101.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 240 Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust. Identities = 237/240 (98%), Positives = 237/240 (98%) Query: 39 MNHEQFPDPESLDSFAERLYPERHQSSAARALACLIASISWFAFVAQTDITIGRLLARGG 98 MNHEQFPDPESLDSFAERLYPER QSSAARALACLIASISWFAFVAQTDITI RLLARGG Sbjct: 1 MNHEQFPDPESLDSFAERLYPERRQSSAARALACLIASISWFAFVAQTDITISRLLARGG 60 Query: 99 GVLDGLDRLTMYLTNLTILMSALCFTSLALSLKTPLSRFFRQPAVITAVVTYLAFVGIAY 158 GVLDGLDRLTMYLTNLTILMSALCFTSLALSLKTPLSRFFRQPAVITAVVTYLAFVGIAY Sbjct: 61 GVLDGLDRLTMYLTNLTILMSALCFTSLALSLKTPLSRFFRQPAVITAVVTYLAFVGIAY 120 Query: 159 NLLLRQLWTPTGFRALVNESLHTVVPLLAIVYWIFFVPVFQASWRKALLWLAYPLGYLFI 218 NLLLRQLWTPTGFRALVNESLHTVVPLLAIVYWIFFVPVFQASWRKALLWLAYPLGYLFI Sbjct: 121 NLLLRQLWTPTGFRALVNESLHTVVPLLAIVYWIFFVPVFQASWRKALLWLAYPLGYLFI 180 Query: 219 TLWRGALSGFYPYPFIDVNALGYLRVAVNASLLLVGFLGLMGLFIAVNRSGKPVLLRKQD 278 TLWRGALSGFYPYPFIDVNALGYLRVAVNASLLLVGFLGLM LFIAVNRSGKPVLLRKQD Sbjct: 181 TLWRGALSGFYPYPFIDVNALGYLRVAVNASLLLVGFLGLMALFIAVNRSGKPVLLRKQD 240 >ref|YP_001889688.1| hypothetical protein Bphyt_5984 [Burkholderia phytofirmans PsJN] gb|ACD20317.1| hypothetical protein Bphyt_5984 [Burkholderia phytofirmans PsJN] Length = 227 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 113/186 (60%), Positives = 136/186 (73%), Gaps = 3/186 (1%) Query: 83 VAQTDITIGRLLARGGGVLDGLDRLTMYLTNLTILMSALCFTSLAL--SLKTPLSRFFRQ 140 VAQ ++TI R LARG VLDGL R++ YLTNLT L A+CFT +AL TP +RFFRQ Sbjct: 38 VAQAEVTIDRTLARGLSVLDGLARMSSYLTNLTALACAICFTCVALRRHRSTP-ARFFRQ 96 Query: 141 PAVITAVVTYLAFVGIAYNLLLRQLWTPTGFRALVNESLHTVVPLLAIVYWIFFVPVFQA 200 P V+TAVV Y+AFVGIAYNLLLR WTPT FR L+NESLH+V+P+L+ +YW+ FVP F Sbjct: 97 PTVVTAVVVYMAFVGIAYNLLLRGYWTPTAFRMLLNESLHSVLPMLSALYWVLFVPRFHL 156 Query: 201 SWRKALLWLAYPLGYLFITLWRGALSGFYPYPFIDVNALGYLRVAVNASLLLVGFLGLMG 260 R L WL YPL YL +T WRG LS FYPYPFI+V LG+ VN++LL GFL LM Sbjct: 157 KLRHCLWWLVYPLTYLGVTFWRGRLSDFYPYPFINVERLGFTHAMVNSALLFGGFLMLMA 216 Query: 261 LFIAVN 266 LF+ +N Sbjct: 217 LFVGIN 222 >ref|YP_001857442.1| hypothetical protein Bphy_1212 [Burkholderia phymatum STM815] gb|ACC70396.1| hypothetical protein Bphy_1212 [Burkholderia phymatum STM815] Length = 255 Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 113/191 (59%), Positives = 138/191 (72%), Gaps = 2/191 (1%) Query: 59 PERHQSSAARALACLIASISWFAFVAQTDITIGRLLARGGGVLDGLDRLTMYLTNLTILM 118 P R A+ LA IA ++W AF AQTDIT+ R+L+RG GVL G++RLT YLTNLTI Sbjct: 22 PLRAPDLASVTLAMSIALVAWLAFAAQTDITVLRMLSRGYGVLGGIERLTSYLTNLTIFT 81 Query: 119 SALCFTSLAL--SLKTPLSRFFRQPAVITAVVTYLAFVGIAYNLLLRQLWTPTGFRALVN 176 A+CFT + K P+ RFFRQP V+TAV Y+ FVG AYNLLLR LWTP+G+R ++N Sbjct: 82 CAVCFTCVGFFARGKMPIVRFFRQPTVVTAVTCYIVFVGFAYNLLLRHLWTPSGWRMVLN 141 Query: 177 ESLHTVVPLLAIVYWIFFVPVFQASWRKALLWLAYPLGYLFITLWRGALSGFYPYPFIDV 236 ESLHT+VPLL +YW+ FVP F + R L WL YPLGYL +T+ RGA+S FYPYPFIDV Sbjct: 142 ESLHTLVPLLDALYWLLFVPRFHLTLRHLLWWLVYPLGYLALTMARGAVSDFYPYPFIDV 201 Query: 237 NALGYLRVAVN 247 LGY RV +N Sbjct: 202 GELGYGRVFIN 212 >ref|ZP_03270217.1| hypothetical protein BH160DRAFT_6496 [Burkholderia sp. H160] gb|EDZ98196.1| hypothetical protein BH160DRAFT_6496 [Burkholderia sp. H160] Length = 227 Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 116/213 (54%), Positives = 148/213 (69%), Gaps = 1/213 (0%) Query: 55 ERLYPERHQSSAARALACLIASISWFAFVAQTDITIGRLLARGGGVLDGLDRLTMYLTNL 114 E P S ++ LA +IA I+W A AQ D+TI R LARG V DGL R++ YLT+L Sbjct: 10 ESELPLHTPSVSSLTLAAVIAVIAWMAIFAQADLTIDRTLARGLTVFDGLARMSSYLTHL 69 Query: 115 TILMSALCFTSLAL-SLKTPLSRFFRQPAVITAVVTYLAFVGIAYNLLLRQLWTPTGFRA 173 T+L A CFTS+AL ++PL RFFRQP +TAVV Y+ FVGIAYNLLLR LW + +R Sbjct: 70 TVLACAFCFTSIALWKHRSPLVRFFRQPTAVTAVVAYMVFVGIAYNLLLRGLWPLSPYRR 129 Query: 174 LVNESLHTVVPLLAIVYWIFFVPVFQASWRKALLWLAYPLGYLFITLWRGALSGFYPYPF 233 L+NESLH+V+P+LA +YW+ FVP F R LLWL YPL YL IT RG LS FYPYPF Sbjct: 130 LLNESLHSVLPMLATLYWVLFVPRFHLRLRDCLLWLVYPLVYLGITFGRGTLSDFYPYPF 189 Query: 234 IDVNALGYLRVAVNASLLLVGFLGLMGLFIAVN 266 I+V+ LG +V VN++LL FL ++ +F+ +N Sbjct: 190 INVDTLGLRQVLVNSALLFGSFLMVLAVFVGIN 222 >ref|YP_003606960.1| hypothetical protein BC1002_3415 [Burkholderia sp. CCGE1002] gb|ADG17449.1| conserved hypothetical protein [Burkholderia sp. CCGE1002] Length = 227 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 120/213 (56%), Positives = 150/213 (70%), Gaps = 1/213 (0%) Query: 55 ERLYPERHQSSAARALACLIASISWFAFVAQTDITIGRLLARGGGVLDGLDRLTMYLTNL 114 E P S ++ LA +IA I+W A +AQ D+TI R LARG V D L R++ YLTNL Sbjct: 10 ESELPLHTPSVSSLMLAAVIALIAWMAILAQADLTIDRTLARGLTVFDALARMSSYLTNL 69 Query: 115 TILMSALCFTSLAL-SLKTPLSRFFRQPAVITAVVTYLAFVGIAYNLLLRQLWTPTGFRA 173 T+L SA CFT +AL +PL RFFRQP V+TAVV Y+ FVGIAYN+LLR LW + +R Sbjct: 70 TVLASAFCFTCVALWKHSSPLVRFFRQPTVVTAVVAYMVFVGIAYNVLLRGLWPLSPYRL 129 Query: 174 LVNESLHTVVPLLAIVYWIFFVPVFQASWRKALLWLAYPLGYLFITLWRGALSGFYPYPF 233 L+NESLH+V+P+LA +YW+ FVP F R LLWL YPL YL IT WRG+LS FYPYPF Sbjct: 130 LLNESLHSVLPMLAALYWVLFVPRFHLRLRHCLLWLVYPLAYLGITFWRGSLSDFYPYPF 189 Query: 234 IDVNALGYLRVAVNASLLLVGFLGLMGLFIAVN 266 IDV LG +V VN++LL GFL L+ +F+ +N Sbjct: 190 IDVETLGLRQVLVNSALLFGGFLMLLAVFVGIN 222 >ref|ZP_06844095.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] gb|EFG68255.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] Length = 227 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 114/209 (54%), Positives = 147/209 (70%), Gaps = 1/209 (0%) Query: 59 PERHQSSAARALACLIASISWFAFVAQTDITIGRLLARGGGVLDGLDRLTMYLTNLTILM 118 P S ++ LA ++A I+W + VAQ D+TI R LARG V DG R++ YLTNLT+L Sbjct: 14 PLHTPSVSSVTLAAIVAVIAWISIVAQADVTIDRTLARGLTVFDGFARMSSYLTNLTVLA 73 Query: 119 SALCFTSLAL-SLKTPLSRFFRQPAVITAVVTYLAFVGIAYNLLLRQLWTPTGFRALVNE 177 A+CFT +AL S ++ +RFFRQP V+TAVV Y+ FVGIAYNLLLR LW+P FR L+NE Sbjct: 74 CAICFTCVALRSHRSAPARFFRQPTVVTAVVVYMVFVGIAYNLLLRGLWSPAAFRLLLNE 133 Query: 178 SLHTVVPLLAIVYWIFFVPVFQASWRKALLWLAYPLGYLFITLWRGALSGFYPYPFIDVN 237 SLH+ +P+LA +Y + FVP F R LLWL YPL YL +T WR +LS FYPYPFI+V Sbjct: 134 SLHSALPMLAALYRVLFVPRFHLKLRHCLLWLVYPLAYLGVTFWRASLSDFYPYPFINVE 193 Query: 238 ALGYLRVAVNASLLLVGFLGLMGLFIAVN 266 LG V VN++LL GF+ LM +F+ +N Sbjct: 194 MLGLRHVVVNSALLFGGFIMLMAVFVGIN 222 >ref|YP_553117.1| hypothetical protein Bxe_B2219 [Burkholderia xenovorans LB400] gb|ABE33767.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 173 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 96/168 (57%), Positives = 124/168 (73%), Gaps = 1/168 (0%) Query: 100 VLDGLDRLTMYLTNLTILMSALCFTSLAL-SLKTPLSRFFRQPAVITAVVTYLAFVGIAY 158 + DG R++ YLTNLT+L A+CFT +AL + ++ +RFFRQP V+TAVV Y+ FVGIAY Sbjct: 1 MFDGFARMSSYLTNLTVLACAICFTCVALRAQRSAPARFFRQPTVVTAVVVYMVFVGIAY 60 Query: 159 NLLLRQLWTPTGFRALVNESLHTVVPLLAIVYWIFFVPVFQASWRKALLWLAYPLGYLFI 218 NLLLR LW+P FR L+NESLH+V+P+LA +YW+ FVP F R LLWL YPL YL + Sbjct: 61 NLLLRGLWSPAAFRLLLNESLHSVLPMLAALYWVLFVPRFHLKLRHCLLWLVYPLAYLGV 120 Query: 219 TLWRGALSGFYPYPFIDVNALGYLRVAVNASLLLVGFLGLMGLFIAVN 266 T WR +LS FYPYPFI+V LG V +N++LL GFL LM +F+ +N Sbjct: 121 TFWRASLSDFYPYPFINVEMLGLRHVVLNSALLFGGFLMLMAVFVGIN 168 >ref|YP_004754041.1| integral membrane protein [Collimonas fungivorans Ter331] gb|AEK63218.1| Integral membrane protein [Collimonas fungivorans Ter331] Length = 216 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 92/217 (42%), Positives = 129/217 (59%), Gaps = 6/217 (2%) Query: 62 HQSSAARALACLIASISWFAFVAQTDITIGRLLARGGGVLDGLDRLTMYLTNLTILMSAL 121 ++ A + L LI ++WF+ AQ I+I LLA+G + + R+ YLT LT ++ A+ Sbjct: 2 KKAIAPQLLLLLITLVAWFSIAAQFSISIPILLAKGMTYGEAVWRMFGYLTILTNVLLAV 61 Query: 122 CFTSLALSLKTPLSRFFRQPAVITAVVTYLAFVGIAYNLLLRQLWTPTGFRALVNESLHT 181 C T L L + RFF +P V+TA+ Y+ VG+ YNLLLR TG L +E LHT Sbjct: 62 CCTLLLLKPDSTPGRFFSRPGVLTAMTLYIIIVGLGYNLLLRNHAPFTGLHRLSDEGLHT 121 Query: 182 VVPLLAIVYWIFFVPVFQASWRKALLWLAYPLGYLFITLWRGALSGFYPYPFIDVNALGY 241 VVPLL ++YW+ F + +LLWL YPL Y + + RG LSGFYPYPF++V LGY Sbjct: 122 VVPLLFVLYWLLFSAKSGLQAKDSLLWLIYPLAYFAMAMVRGGLSGFYPYPFLNVIQLGY 181 Query: 242 LRVAVNASLLLVGFLGLMGLFIAVNRSGKPVLLRKQD 278 RV NA++LL+GF + +A+ R R+QD Sbjct: 182 PRVMANAAMLLMGFFLIAMALVAIARY------RRQD 212 >ref|YP_003093553.1| hypothetical protein Phep_3297 [Pedobacter heparinus DSM 2366] gb|ACU05491.1| conserved hypothetical protein [Pedobacter heparinus DSM 2366] Length = 220 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 120/219 (54%), Gaps = 6/219 (2%) Query: 60 ERHQSSAARALACLIASISWFAFVAQTDITIGRLLARGGGVLDGLDRLTMYLTNLTILMS 119 E A++ + WFA +AQ + I + +++ + R + T LT +++ Sbjct: 2 EGKHLKASKVFLITGVLLGWFALLAQLYLII---VNNAIPLMESVVRYFSFFTILTNIIA 58 Query: 120 ALCFTSLALSLKTPLSRFFRQPAVITAVVTYLAFVGIAYNLLLRQLWTPTGFRALVNESL 179 ALC + L LS F +P + AV Y++ VGI YNL+LR W P G + V+E L Sbjct: 59 ALCLSKLLLSFNKEGHGFLTRPDTLAAVTVYISVVGIVYNLILRFTWQPQGLQFFVDELL 118 Query: 180 HTVVPLLAIVYWIFFVPVFQASWRKALLWLAYPLGYLFITLWRGALSGFYPYPFIDVNAL 239 H V+P+L I YW+ FVP +W +LLWL YP YL L GA SGFYPYPFIDV+ L Sbjct: 119 HAVIPILFIAYWLLFVPKNTLNWSASLLWLIYPFLYLLFILLHGAYSGFYPYPFIDVSKL 178 Query: 240 GYLRVAVNASLLLVGFLGLMGLFIAVNRSGKPVLLRKQD 278 GY +V +N+ LL+ FL L L I SGK + K+ Sbjct: 179 GYNKVLLNSFYLLIVFLTLSLLLIG---SGKLIQNHKKK 214 >ref|ZP_03698033.1| conserved hypothetical protein [Lutiella nitroferrum 2002] gb|EEG08775.1| conserved hypothetical protein [Lutiella nitroferrum 2002] Length = 221 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 112/212 (52%) Query: 62 HQSSAARALACLIASISWFAFVAQTDITIGRLLARGGGVLDGLDRLTMYLTNLTILMSAL 121 + L+ S+ WFA Q + I L RG + Y T LT L A Sbjct: 2 QNEKTRQVFELLLLSLGWFALGLQLYLGIVAELHRGVAWQWTVFNYFSYFTILTNLFLAA 61 Query: 122 CFTSLALSLKTPLSRFFRQPAVITAVVTYLAFVGIAYNLLLRQLWTPTGFRALVNESLHT 181 T L + F R+P V +A + Y+ VG+ Y +LLR LW PTG+R L + LH Sbjct: 62 GLTVPRLRPHSRFGDFLRRPTVRSASLVYITIVGLVYAILLRHLWNPTGWRWLGDVLLHD 121 Query: 182 VVPLLAIVYWIFFVPVFQASWRKALLWLAYPLGYLFITLWRGALSGFYPYPFIDVNALGY 241 V+P+ V+W+ FVP + WR ALLWLAYP GYL TL RG G YPYPF++V LGY Sbjct: 122 VIPIGYFVHWVLFVPPARLRWRDALLWLAYPGGYLAYTLLRGVFVGLYPYPFLNVLRLGY 181 Query: 242 LRVAVNASLLLVGFLGLMGLFIAVNRSGKPVL 273 V VN++ L + F+ + L + ++R K +L Sbjct: 182 QGVLVNSAFLALAFVAMGWLVVVLDRHVKGLL 213