BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0110.p (528 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774989.1| dipeptide ABC transporter periplasmic protei... 1076 0.0 ref|YP_995615.1| extracellular solute-binding protein [Vermineph... 910 0.0 ref|YP_002981718.1| family 5 extracellular solute-binding protei... 848 0.0 ref|YP_004685431.1| dipeptide transport system permease DppA [Cu... 840 0.0 ref|YP_001899653.1| family 5 extracellular solute-binding protei... 839 0.0 ref|ZP_07677131.1| peptide ABC transporter, periplasmic peptide-... 838 0.0 ref|YP_004126024.1| extracellular solute-binding protein family ... 837 0.0 ref|YP_004389397.1| ABC transporter periplasmic subunit [Alicycl... 837 0.0 emb|CCA83316.1| dipeptide transport protein [blood disease bacte... 831 0.0 ref|YP_003752155.1| dipeptide transport protein [Ralstonia solan... 830 0.0 >ref|YP_003774989.1| dipeptide ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ63081.1| ABC-type dipeptide transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 528 Score = 1076 bits (2782), Expect = 0.0, Method: Compositional matrix adjust. Identities = 528/528 (100%), Positives = 528/528 (100%) Query: 1 MKKTLLTRLLAIALTGAALAAAADAAHAQNLNIAFADPLSSLDPQLNNHAGDRSVDLHFW 60 MKKTLLTRLLAIALTGAALAAAADAAHAQNLNIAFADPLSSLDPQLNNHAGDRSVDLHFW Sbjct: 1 MKKTLLTRLLAIALTGAALAAAADAAHAQNLNIAFADPLSSLDPQLNNHAGDRSVDLHFW 60 Query: 61 DLLVQNDYNKLVPGLAVSWKNIDPKTWEFKLRPNVKWQDGKPFTADDVIFSYQRARAVPG 120 DLLVQNDYNKLVPGLAVSWKNIDPKTWEFKLRPNVKWQDGKPFTADDVIFSYQRARAVPG Sbjct: 61 DLLVQNDYNKLVPGLAVSWKNIDPKTWEFKLRPNVKWQDGKPFTADDVIFSYQRARAVPG 120 Query: 121 SVATFAGYLRTVESVTAKDPLTLVIKTNIPNPDLPLNLASVHIVSKHIGEKSTTENYNSG 180 SVATFAGYLRTVESVTAKDPLTLVIKTNIPNPDLPLNLASVHIVSKHIGEKSTTENYNSG Sbjct: 121 SVATFAGYLRTVESVTAKDPLTLVIKTNIPNPDLPLNLASVHIVSKHIGEKSTTENYNSG 180 Query: 181 AAVIGTGPYKFVSYTPGDRVVMQRNDDYWNGKPLWEKVNYRYINNGAARTAALLSGDVDV 240 AAVIGTGPYKFVSYTPGDRVVMQRNDDYWNGKPLWEKVNYRYINNGAARTAALLSGDVDV Sbjct: 181 AAVIGTGPYKFVSYTPGDRVVMQRNDDYWNGKPLWEKVNYRYINNGAARTAALLSGDVDV 240 Query: 241 IDKVSVSDLAKLKQSPNVKVYPYNGLRVLLIQPSFHQGPSPFITDNNGKQLDKNPLLDVR 300 IDKVSVSDLAKLKQSPNVKVYPYNGLRVLLIQPSFHQGPSPFITDNNGKQLDKNPLLDVR Sbjct: 241 IDKVSVSDLAKLKQSPNVKVYPYNGLRVLLIQPSFHQGPSPFITDNNGKQLDKNPLLDVR 300 Query: 301 VRRAMSLAINRKALIDRILQGAATEANQWMPADTFGYNPEIKNIPFDAAQAKKLLADAGF 360 VRRAMSLAINRKALIDRILQGAATEANQWMPADTFGYNPEIKNIPFDAAQAKKLLADAGF Sbjct: 301 VRRAMSLAINRKALIDRILQGAATEANQWMPADTFGYNPEIKNIPFDAAQAKKLLADAGF 360 Query: 361 PDGFKLTIHVPNDRYPQAPETMQAVAQFWTRIGIKTQVEVLPWAAYSSRANKNEFAVSVL 420 PDGFKLTIHVPNDRYPQAPETMQAVAQFWTRIGIKTQVEVLPWAAYSSRANKNEFAVSVL Sbjct: 361 PDGFKLTIHVPNDRYPQAPETMQAVAQFWTRIGIKTQVEVLPWAAYSSRANKNEFAVSVL 420 Query: 421 AWGNGTGEASYALVNVLGSVDPKKGIGASNWNHYSSPAVDKALADSTAEFDAAKREAILR 480 AWGNGTGEASYALVNVLGSVDPKKGIGASNWNHYSSPAVDKALADSTAEFDAAKREAILR Sbjct: 421 AWGNGTGEASYALVNVLGSVDPKKGIGASNWNHYSSPAVDKALADSTAEFDAAKREAILR 480 Query: 481 GAAKTVSEEVGVIPLYHYQNIWAAKKGLKVTPISSDRTTAMMVTEDKK 528 GAAKTVSEEVGVIPLYHYQNIWAAKKGLKVTPISSDRTTAMMVTEDKK Sbjct: 481 GAAKTVSEEVGVIPLYHYQNIWAAKKGLKVTPISSDRTTAMMVTEDKK 528 >ref|YP_995615.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gb|ABM56597.1| extracellular solute-binding protein, family 5 [Verminephrobacter eiseniae EF01-2] Length = 549 Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust. Identities = 440/528 (83%), Positives = 483/528 (91%), Gaps = 6/528 (1%) Query: 1 MKKTLLTRLLAIALTGAALAAAADAAHAQNLNIAFADPLSSLDPQLNNHAGDRSVDLHFW 60 MKKTLL+ L+A A A A AQ LNIAFADPLSSLDPQLNNHAGDRSV+LHFW Sbjct: 28 MKKTLLSSLMAAA------LLGAACAGAQTLNIAFADPLSSLDPQLNNHAGDRSVNLHFW 81 Query: 61 DLLVQNDYNKLVPGLAVSWKNIDPKTWEFKLRPNVKWQDGKPFTADDVIFSYQRARAVPG 120 DLLV+N+YN+L PGLAVSW+NID KTWEFKLRP VKWQDGKPF A+DVIFSYQRAR VPG Sbjct: 82 DLLVENNYNRLQPGLAVSWENIDAKTWEFKLRPGVKWQDGKPFAAEDVIFSYQRARNVPG 141 Query: 121 SVATFAGYLRTVESVTAKDPLTLVIKTNIPNPDLPLNLASVHIVSKHIGEKSTTENYNSG 180 SVATFAGYLRTVESVTAKDPLTL+IKTNI NPDLPLNLASVHI+SKH+GEKS TENYNSG Sbjct: 142 SVATFAGYLRTVESVTAKDPLTLIIKTNIANPDLPLNLASVHIISKHVGEKSQTENYNSG 201 Query: 181 AAVIGTGPYKFVSYTPGDRVVMQRNDDYWNGKPLWEKVNYRYINNGAARTAALLSGDVDV 240 AA++G+GPYK++SYTPGDR+VM+R+ DYW K +WEKVNYRYINN AARTAALLSGDVDV Sbjct: 202 AAMVGSGPYKYISYTPGDRIVMERSHDYWGPKQIWEKVNYRYINNAAARTAALLSGDVDV 261 Query: 241 IDKVSVSDLAKLKQSPNVKVYPYNGLRVLLIQPSFHQGPSPFITDNNGKQLDKNPLLDVR 300 IDKVS SDLA+LKQSPNVKV+ YNGLRV+L+QP+FH+GPSP+ITDNNGKQLD NPLLDVR Sbjct: 262 IDKVSASDLARLKQSPNVKVFQYNGLRVMLLQPTFHEGPSPYITDNNGKQLDNNPLLDVR 321 Query: 301 VRRAMSLAINRKALIDRILQGAATEANQWMPADTFGYNPEIKNIPFDAAQAKKLLADAGF 360 VRRA+SLAINRKALIDRILQGAATEANQWMPADTFGYNPEIKNIP D QAK LLA AG+ Sbjct: 322 VRRALSLAINRKALIDRILQGAATEANQWMPADTFGYNPEIKNIPNDVNQAKTLLAQAGY 381 Query: 361 PDGFKLTIHVPNDRYPQAPETMQAVAQFWTRIGIKTQVEVLPWAAYSSRANKNEFAVSVL 420 P GFKLTIHVPNDRYPQAPE MQAVAQFWTRIG+KTQVEVLPWA+YS+RA KNEFAVSVL Sbjct: 382 PQGFKLTIHVPNDRYPQAPEIMQAVAQFWTRIGVKTQVEVLPWASYSARAKKNEFAVSVL 441 Query: 421 AWGNGTGEASYALVNVLGSVDPKKGIGASNWNHYSSPAVDKALADSTAEFDAAKREAILR 480 AWGNGTGEASYALVNVL +VD KKG+GASNWN+YS+PA+DKALADSTAEFD A+REAILR Sbjct: 442 AWGNGTGEASYALVNVLATVDAKKGLGASNWNYYSNPAIDKALADSTAEFDVARREAILR 501 Query: 481 GAAKTVSEEVGVIPLYHYQNIWAAKKGLKVTPISSDRTTAMMVTEDKK 528 AA VS++VGVIPLYHYQNIWAA+KGLKVTP SSDRTTAMMVT+DK+ Sbjct: 502 NAANIVSDDVGVIPLYHYQNIWAARKGLKVTPASSDRTTAMMVTQDKQ 549 >ref|YP_002981718.1| family 5 extracellular solute-binding protein [Ralstonia pickettii 12D] gb|ACS63046.1| extracellular solute-binding protein family 5 [Ralstonia pickettii 12D] Length = 526 Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/525 (77%), Positives = 464/525 (88%), Gaps = 1/525 (0%) Query: 4 TLLTRLLAIALTGAALAAAADAAHAQNLNIAFADPLSSLDPQLNNHAGDRSVDLHFWDLL 63 T + RLLA +L AL A A A AQ LNIAFADPLSSLDPQLNNHAGDRSVD+HFWDLL Sbjct: 3 THVKRLLASSL-AVALFATAGAVSAQTLNIAFADPLSSLDPQLNNHAGDRSVDVHFWDLL 61 Query: 64 VQNDYNKLVPGLAVSWKNIDPKTWEFKLRPNVKWQDGKPFTADDVIFSYQRARAVPGSVA 123 V+N +NKL PGLA+SWK +DPKTWEFKLRPNVKW DG+PFTADDVIFSYQRAR+VPGSVA Sbjct: 62 VENKWNKLQPGLALSWKTLDPKTWEFKLRPNVKWHDGQPFTADDVIFSYQRARSVPGSVA 121 Query: 124 TFAGYLRTVESVTAKDPLTLVIKTNIPNPDLPLNLASVHIVSKHIGEKSTTENYNSGAAV 183 TFAGYLRTVESVTAKDPLTL+IKT IP+PDLPLNLASVHIVSKH+GEKS+TE+YN+G AV Sbjct: 122 TFAGYLRTVESVTAKDPLTLIIKTTIPSPDLPLNLASVHIVSKHVGEKSSTEDYNAGRAV 181 Query: 184 IGTGPYKFVSYTPGDRVVMQRNDDYWNGKPLWEKVNYRYINNGAARTAALLSGDVDVIDK 243 +GTGPYKFVSY PGDRVVM RND+YW K LWEKVNYRYINN AARTA LLSG+VDVIDK Sbjct: 182 VGTGPYKFVSYVPGDRVVMARNDNYWGDKQLWEKVNYRYINNAAARTANLLSGEVDVIDK 241 Query: 244 VSVSDLAKLKQSPNVKVYPYNGLRVLLIQPSFHQGPSPFITDNNGKQLDKNPLLDVRVRR 303 VSVSDLA+L+QSPNVKV+ Y GLRV+L+QPSF +GP+ +IT N+GK L NPLLDVRVRR Sbjct: 242 VSVSDLARLRQSPNVKVFAYPGLRVMLLQPSFRKGPNDYITGNDGKPLPNNPLLDVRVRR 301 Query: 304 AMSLAINRKALIDRILQGAATEANQWMPADTFGYNPEIKNIPFDAAQAKKLLADAGFPDG 363 A+SLAI+RKA++DRILQGAAT ANQWMP+DT+GYNP++K+I +D QAKKLLA+AGFP G Sbjct: 302 ALSLAIDRKAIVDRILQGAATVANQWMPSDTYGYNPDVKDIAYDPVQAKKLLAEAGFPQG 361 Query: 364 FKLTIHVPNDRYPQAPETMQAVAQFWTRIGIKTQVEVLPWAAYSSRANKNEFAVSVLAWG 423 F L IHVPNDRYPQ PET QAVAQFWTRIG+K++VEV+PW+ YS RANKNE+A+S+LAWG Sbjct: 362 FNLVIHVPNDRYPQGPETAQAVAQFWTRIGVKSRVEVVPWSVYSGRANKNEYAMSMLAWG 421 Query: 424 NGTGEASYALVNVLGSVDPKKGIGASNWNHYSSPAVDKALADSTAEFDAAKREAILRGAA 483 NGTGEASYALVNVL +VD KKG+GASNW HYS+ AVD AL ST EF+ KR AILR + Sbjct: 422 NGTGEASYALVNVLATVDTKKGLGASNWGHYSNAAVDNALNASTEEFNVEKRAAILRHSV 481 Query: 484 KTVSEEVGVIPLYHYQNIWAAKKGLKVTPISSDRTTAMMVTEDKK 528 K VS++VGV+PLYHYQN+WAAKKGLKVTP++SDRT A MVT+D K Sbjct: 482 KLVSDDVGVMPLYHYQNVWAAKKGLKVTPMTSDRTAAQMVTKDGK 526 >ref|YP_004685431.1| dipeptide transport system permease DppA [Cupriavidus necator N-1] gb|AEI76950.1| dipeptide transport system permease protein DppA [Cupriavidus necator N-1] Length = 526 Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/500 (78%), Positives = 449/500 (89%) Query: 29 QNLNIAFADPLSSLDPQLNNHAGDRSVDLHFWDLLVQNDYNKLVPGLAVSWKNIDPKTWE 88 Q+L I FADPLSSLDPQLNNHAGDRSVDLHFWDLL++N NKL PGLA+SWK +D KTWE Sbjct: 27 QSLTIGFADPLSSLDPQLNNHAGDRSVDLHFWDLLIENKDNKLQPGLALSWKALDDKTWE 86 Query: 89 FKLRPNVKWQDGKPFTADDVIFSYQRARAVPGSVATFAGYLRTVESVTAKDPLTLVIKTN 148 FKLR +VKWQDGKPFTA+DV+FSYQRAR VPGSVA+F+GYLRT+ES TAKDP TL++KTN Sbjct: 87 FKLRRDVKWQDGKPFTAEDVVFSYQRARNVPGSVASFSGYLRTIESATAKDPYTLLVKTN 146 Query: 149 IPNPDLPLNLASVHIVSKHIGEKSTTENYNSGAAVIGTGPYKFVSYTPGDRVVMQRNDDY 208 I NPDLPLNLASVHIVSKH+G+K+ T++YN+G AV+GTGPYKF+SYTPGDRV+M RND Y Sbjct: 147 IANPDLPLNLASVHIVSKHVGDKANTDDYNAGRAVVGTGPYKFISYTPGDRVIMARNDGY 206 Query: 209 WNGKPLWEKVNYRYINNGAARTAALLSGDVDVIDKVSVSDLAKLKQSPNVKVYPYNGLRV 268 W K +W++VNYRYINNG ARTAALLSGDVDVIDKVSVSDLAKLKQSP V V+PYNGLRV Sbjct: 207 WGAKAIWQQVNYRYINNGPARTAALLSGDVDVIDKVSVSDLAKLKQSPTVSVFPYNGLRV 266 Query: 269 LLIQPSFHQGPSPFITDNNGKQLDKNPLLDVRVRRAMSLAINRKALIDRILQGAATEANQ 328 +L+QPSF GP+P+ITDN GK LDKNPLLDVRVRRA+SLAINR+A++ RILQ AT ANQ Sbjct: 267 MLLQPSFKPGPNPYITDNAGKPLDKNPLLDVRVRRALSLAINREAVVGRILQNTATVANQ 326 Query: 329 WMPADTFGYNPEIKNIPFDAAQAKKLLADAGFPDGFKLTIHVPNDRYPQAPETMQAVAQF 388 WMP TFGYNPE+K+I +D AQAKKLLA+AGFPDGF+LTIH PNDRYPQ PET QAVAQF Sbjct: 327 WMPKGTFGYNPEVKDIAYDPAQAKKLLAEAGFPDGFRLTIHAPNDRYPQGPETAQAVAQF 386 Query: 389 WTRIGIKTQVEVLPWAAYSSRANKNEFAVSVLAWGNGTGEASYALVNVLGSVDPKKGIGA 448 WTR+G+KTQVEV+PW+ YS RANKNE+AVS+LAWGNGTGEASYALVNVL +VD KKG+GA Sbjct: 387 WTRVGVKTQVEVVPWSVYSGRANKNEYAVSMLAWGNGTGEASYALVNVLATVDAKKGLGA 446 Query: 449 SNWNHYSSPAVDKALADSTAEFDAAKREAILRGAAKTVSEEVGVIPLYHYQNIWAAKKGL 508 SNW HYS+PAVD+AL +STAEFDAAKRE ILR + K VS++VGV+PLYHYQNIWAAKKGL Sbjct: 447 SNWGHYSNPAVDRALEESTAEFDAAKRETILRRSVKLVSDDVGVVPLYHYQNIWAAKKGL 506 Query: 509 KVTPISSDRTTAMMVTEDKK 528 KVTP++SDRT AMMVT K Sbjct: 507 KVTPMTSDRTAAMMVTRTGK 526 >ref|YP_001899653.1| family 5 extracellular solute-binding protein [Ralstonia pickettii 12J] gb|ACD27221.1| extracellular solute-binding protein family 5 [Ralstonia pickettii 12J] Length = 522 Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/500 (78%), Positives = 452/500 (90%) Query: 29 QNLNIAFADPLSSLDPQLNNHAGDRSVDLHFWDLLVQNDYNKLVPGLAVSWKNIDPKTWE 88 Q LNIAFADPLSSLDPQLNNHAGDRSVD+HFWDLLV+N +N+L PGLA+SW+ +DPKTWE Sbjct: 23 QTLNIAFADPLSSLDPQLNNHAGDRSVDVHFWDLLVENKWNQLQPGLALSWRTLDPKTWE 82 Query: 89 FKLRPNVKWQDGKPFTADDVIFSYQRARAVPGSVATFAGYLRTVESVTAKDPLTLVIKTN 148 FKLRPNVKW DG+PFTADDVIFSYQRAR+VPGSVATFAGYLRTVESVTAKDPLTL+IKTN Sbjct: 83 FKLRPNVKWHDGQPFTADDVIFSYQRARSVPGSVATFAGYLRTVESVTAKDPLTLIIKTN 142 Query: 149 IPNPDLPLNLASVHIVSKHIGEKSTTENYNSGAAVIGTGPYKFVSYTPGDRVVMQRNDDY 208 IPNPDLPLNLASVHIVSKH+GEKS+TE+YN+G AV+GTGPYKFVSY PGDRVVM RND+Y Sbjct: 143 IPNPDLPLNLASVHIVSKHVGEKSSTEDYNAGRAVVGTGPYKFVSYVPGDRVVMARNDNY 202 Query: 209 WNGKPLWEKVNYRYINNGAARTAALLSGDVDVIDKVSVSDLAKLKQSPNVKVYPYNGLRV 268 W GK LWEKVNYRYINN AARTA LLSG+VDVIDKVSVSDLA+L+QSPNVKV+ Y GLRV Sbjct: 203 WGGKQLWEKVNYRYINNAAARTANLLSGEVDVIDKVSVSDLARLRQSPNVKVFSYPGLRV 262 Query: 269 LLIQPSFHQGPSPFITDNNGKQLDKNPLLDVRVRRAMSLAINRKALIDRILQGAATEANQ 328 +L+QPSF +GP+ ++T N+GK L NPLLDVRVRRA+SLAI+RKA++DRILQGAAT ANQ Sbjct: 263 MLLQPSFRKGPNDYVTGNDGKPLPNNPLLDVRVRRALSLAIDRKAIVDRILQGAATVANQ 322 Query: 329 WMPADTFGYNPEIKNIPFDAAQAKKLLADAGFPDGFKLTIHVPNDRYPQAPETMQAVAQF 388 WMP++T+GYNP++K+I +D AQAKKLLADAGFP GF L +HVPNDRYPQ PET QAVAQF Sbjct: 323 WMPSNTYGYNPDVKDIAYDPAQAKKLLADAGFPQGFNLVMHVPNDRYPQGPETAQAVAQF 382 Query: 389 WTRIGIKTQVEVLPWAAYSSRANKNEFAVSVLAWGNGTGEASYALVNVLGSVDPKKGIGA 448 WTRIG+K +VEV+PW+ YS RANKNE+A+S+LAWGNGTGEASYALVNVL +VD KKG+GA Sbjct: 383 WTRIGVKARVEVVPWSVYSGRANKNEYAMSMLAWGNGTGEASYALVNVLATVDTKKGLGA 442 Query: 449 SNWNHYSSPAVDKALADSTAEFDAAKREAILRGAAKTVSEEVGVIPLYHYQNIWAAKKGL 508 SNW HYS+ AVD AL ST EF+ KR AILR + K VS++VGV+PLYHYQN+WAAKKGL Sbjct: 443 SNWGHYSNAAVDNALNASTEEFNVEKRAAILRHSVKLVSDDVGVMPLYHYQNVWAAKKGL 502 Query: 509 KVTPISSDRTTAMMVTEDKK 528 KVTP++SDRT A MVT+D K Sbjct: 503 KVTPMTSDRTAAQMVTKDGK 522 >ref|ZP_07677131.1| peptide ABC transporter, periplasmic peptide-binding protein [Ralstonia sp. 5_7_47FAA] gb|EFP64417.1| peptide ABC transporter, periplasmic peptide-binding protein [Ralstonia sp. 5_7_47FAA] Length = 522 Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/501 (79%), Positives = 451/501 (90%) Query: 28 AQNLNIAFADPLSSLDPQLNNHAGDRSVDLHFWDLLVQNDYNKLVPGLAVSWKNIDPKTW 87 AQ LNIAFADPLSSLDPQLNNHAGDRSVD+HFWDLLV+N +NKL PGLA+SW+ +DPKTW Sbjct: 22 AQTLNIAFADPLSSLDPQLNNHAGDRSVDVHFWDLLVENKWNKLQPGLALSWRTLDPKTW 81 Query: 88 EFKLRPNVKWQDGKPFTADDVIFSYQRARAVPGSVATFAGYLRTVESVTAKDPLTLVIKT 147 EFKLRPNVKW DG+PFTADDVIFSYQRAR+VPGSVATFAGYLRTVESVTAKDPLTL+IKT Sbjct: 82 EFKLRPNVKWHDGQPFTADDVIFSYQRARSVPGSVATFAGYLRTVESVTAKDPLTLIIKT 141 Query: 148 NIPNPDLPLNLASVHIVSKHIGEKSTTENYNSGAAVIGTGPYKFVSYTPGDRVVMQRNDD 207 IP+PDLPLNLASVHIVSKH+GEKS+TE+YN+G AV+GTGPYKFVSY PGDRVVM RND+ Sbjct: 142 TIPSPDLPLNLASVHIVSKHVGEKSSTEDYNAGRAVVGTGPYKFVSYVPGDRVVMARNDN 201 Query: 208 YWNGKPLWEKVNYRYINNGAARTAALLSGDVDVIDKVSVSDLAKLKQSPNVKVYPYNGLR 267 YW K LWEKVNYRYINN AARTA LLSG+VDVIDKVSVSDLA+L+QSPNVKV+ Y GLR Sbjct: 202 YWGDKQLWEKVNYRYINNAAARTANLLSGEVDVIDKVSVSDLARLRQSPNVKVFAYPGLR 261 Query: 268 VLLIQPSFHQGPSPFITDNNGKQLDKNPLLDVRVRRAMSLAINRKALIDRILQGAATEAN 327 V+L+QPSF +GP+ +IT N+GK L NPLLDVRVRRA+SLAI+RKA++DRILQGAAT AN Sbjct: 262 VMLLQPSFRKGPNDYITGNDGKPLPNNPLLDVRVRRALSLAIDRKAIVDRILQGAATVAN 321 Query: 328 QWMPADTFGYNPEIKNIPFDAAQAKKLLADAGFPDGFKLTIHVPNDRYPQAPETMQAVAQ 387 QWMP+DT+GYNP++K+I +D AQAKKLLADAGFP GF L IHVPNDRYPQ PET QAVAQ Sbjct: 322 QWMPSDTYGYNPDVKDIAYDPAQAKKLLADAGFPQGFNLVIHVPNDRYPQGPETAQAVAQ 381 Query: 388 FWTRIGIKTQVEVLPWAAYSSRANKNEFAVSVLAWGNGTGEASYALVNVLGSVDPKKGIG 447 FWTRIG+K +VEV+PW+ YS RANKNE+A+S+LAWGNGTGEASYALVNVL +VD KKG+G Sbjct: 382 FWTRIGVKARVEVVPWSVYSGRANKNEYAMSMLAWGNGTGEASYALVNVLATVDTKKGLG 441 Query: 448 ASNWNHYSSPAVDKALADSTAEFDAAKREAILRGAAKTVSEEVGVIPLYHYQNIWAAKKG 507 ASNW HYS+ AVD AL ST EF+ KR AILR + K VS++VGV+PLYHYQN+WAAKKG Sbjct: 442 ASNWGHYSNAAVDNALNASTEEFNVEKRAAILRHSVKLVSDDVGVMPLYHYQNVWAAKKG 501 Query: 508 LKVTPISSDRTTAMMVTEDKK 528 LKVTP++SDRT A MVT+D K Sbjct: 502 LKVTPMTSDRTAAQMVTKDGK 522 >ref|YP_004126024.1| extracellular solute-binding protein family 5 [Alicycliphilus denitrificans BC] gb|ADU99136.1| extracellular solute-binding protein family 5 [Alicycliphilus denitrificans BC] Length = 522 Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/500 (80%), Positives = 453/500 (90%) Query: 29 QNLNIAFADPLSSLDPQLNNHAGDRSVDLHFWDLLVQNDYNKLVPGLAVSWKNIDPKTWE 88 Q L+I FADPLSSLDPQLNNHAGDRSVDLHFWDLLV+N N+L PGLA SWKN+DP+TWE Sbjct: 23 QTLSIGFADPLSSLDPQLNNHAGDRSVDLHFWDLLVENKANRLQPGLAESWKNLDPRTWE 82 Query: 89 FKLRPNVKWQDGKPFTADDVIFSYQRARAVPGSVATFAGYLRTVESVTAKDPLTLVIKTN 148 FKLR +VKW DGKPFTADDVIFSYQRAR VPGSVATFAGYLRTVESVTAKDP TLVIKTN Sbjct: 83 FKLRKDVKWHDGKPFTADDVIFSYQRARNVPGSVATFAGYLRTVESVTAKDPHTLVIKTN 142 Query: 149 IPNPDLPLNLASVHIVSKHIGEKSTTENYNSGAAVIGTGPYKFVSYTPGDRVVMQRNDDY 208 IPNPDLPLNLASVHIVSKH+GEK+ T++YN+G AVIGTGPYKFVSYTPGDRVVM RND Y Sbjct: 143 IPNPDLPLNLASVHIVSKHVGEKAATDDYNAGRAVIGTGPYKFVSYTPGDRVVMTRNDAY 202 Query: 209 WNGKPLWEKVNYRYINNGAARTAALLSGDVDVIDKVSVSDLAKLKQSPNVKVYPYNGLRV 268 W+GKP WEKVNYRYINN AARTAALL+GDVDVIDKVSVSDLA+LKQS N+ V+PY+GLRV Sbjct: 203 WDGKPYWEKVNYRYINNAAARTAALLAGDVDVIDKVSVSDLARLKQSSNITVFPYDGLRV 262 Query: 269 LLIQPSFHQGPSPFITDNNGKQLDKNPLLDVRVRRAMSLAINRKALIDRILQGAATEANQ 328 +L+QPSF+ SP++TDN G L KNPLLD RVR+A+S+AINRKA+ DRILQ ATEANQ Sbjct: 263 MLLQPSFNPAQSPYLTDNAGNPLPKNPLLDQRVRQALSIAINRKAITDRILQDTATEANQ 322 Query: 329 WMPADTFGYNPEIKNIPFDAAQAKKLLADAGFPDGFKLTIHVPNDRYPQAPETMQAVAQF 388 WMP T+GYNPEIKNI FDAAQAKKLLADAGFP+GFKLT+HVPNDRYPQ PET QAVAQF Sbjct: 323 WMPKGTYGYNPEIKNIAFDAAQAKKLLADAGFPEGFKLTMHVPNDRYPQGPETAQAVAQF 382 Query: 389 WTRIGIKTQVEVLPWAAYSSRANKNEFAVSVLAWGNGTGEASYALVNVLGSVDPKKGIGA 448 WTRIG+KTQVEV+PW+ YS RANKNE+A+S+LAWGNGTGEASYALVNVL +VD KG+GA Sbjct: 383 WTRIGVKTQVEVVPWSVYSGRANKNEYAMSMLAWGNGTGEASYALVNVLATVDKAKGLGA 442 Query: 449 SNWNHYSSPAVDKALADSTAEFDAAKREAILRGAAKTVSEEVGVIPLYHYQNIWAAKKGL 508 SNW HYS+PAVDKALA+STAEFD A+REAILR +AK VS++ G+IPL+HY+N+WAAKKGL Sbjct: 443 SNWGHYSNPAVDKALAESTAEFDTARREAILRASAKVVSDDAGIIPLFHYRNVWAAKKGL 502 Query: 509 KVTPISSDRTTAMMVTEDKK 528 KVTP++SDRT AMMVT D K Sbjct: 503 KVTPMTSDRTAAMMVTRDGK 522 >ref|YP_004389397.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gb|AEB85881.1| ABC-type transporter, periplasmic subunit [Alicycliphilus denitrificans K601] Length = 522 Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/500 (80%), Positives = 453/500 (90%) Query: 29 QNLNIAFADPLSSLDPQLNNHAGDRSVDLHFWDLLVQNDYNKLVPGLAVSWKNIDPKTWE 88 Q L+I FADPLSSLDPQLNNHAGDRSVDLHFWDLLV+N N+L PGLA SWKN+DP+TWE Sbjct: 23 QTLSIGFADPLSSLDPQLNNHAGDRSVDLHFWDLLVENKANRLQPGLAESWKNLDPRTWE 82 Query: 89 FKLRPNVKWQDGKPFTADDVIFSYQRARAVPGSVATFAGYLRTVESVTAKDPLTLVIKTN 148 FKLR +VKW DGKPFTADDVIFSYQRAR VPGSVATFAGYLRTVESVTAKDP TLVIKTN Sbjct: 83 FKLRKDVKWHDGKPFTADDVIFSYQRARNVPGSVATFAGYLRTVESVTAKDPHTLVIKTN 142 Query: 149 IPNPDLPLNLASVHIVSKHIGEKSTTENYNSGAAVIGTGPYKFVSYTPGDRVVMQRNDDY 208 IPNPDLPLNLASVHIVSKH+GEK+ T++YN+G AVIGTGPYKFVSYTPGDRVVM RND Y Sbjct: 143 IPNPDLPLNLASVHIVSKHVGEKAATDDYNAGRAVIGTGPYKFVSYTPGDRVVMTRNDAY 202 Query: 209 WNGKPLWEKVNYRYINNGAARTAALLSGDVDVIDKVSVSDLAKLKQSPNVKVYPYNGLRV 268 W+GKP WEKVNYRYINN AARTAALL+GDVDVIDKVSVSDLA+LKQS N+ V+PY+GLRV Sbjct: 203 WDGKPYWEKVNYRYINNAAARTAALLAGDVDVIDKVSVSDLARLKQSSNITVFPYDGLRV 262 Query: 269 LLIQPSFHQGPSPFITDNNGKQLDKNPLLDVRVRRAMSLAINRKALIDRILQGAATEANQ 328 +L+QPSF+ SP++TDN G L KNPLLD RVR+A+S+AINRKA+ DRILQ ATEANQ Sbjct: 263 MLLQPSFNPAQSPYLTDNAGNPLPKNPLLDQRVRQALSIAINRKAITDRILQDTATEANQ 322 Query: 329 WMPADTFGYNPEIKNIPFDAAQAKKLLADAGFPDGFKLTIHVPNDRYPQAPETMQAVAQF 388 WMP T+GYNPEIKNI FDAAQAKKLLADAGFP+GFKLT+HVPNDRYPQ PET QAVAQF Sbjct: 323 WMPKGTYGYNPEIKNIAFDAAQAKKLLADAGFPEGFKLTMHVPNDRYPQGPETAQAVAQF 382 Query: 389 WTRIGIKTQVEVLPWAAYSSRANKNEFAVSVLAWGNGTGEASYALVNVLGSVDPKKGIGA 448 WTRIG+KTQVEV+PW+ YS RANKNE+A+S+LAWGNGTGEASYALVNVL +VD KG+GA Sbjct: 383 WTRIGVKTQVEVVPWSVYSGRANKNEYAMSMLAWGNGTGEASYALVNVLATVDKAKGLGA 442 Query: 449 SNWNHYSSPAVDKALADSTAEFDAAKREAILRGAAKTVSEEVGVIPLYHYQNIWAAKKGL 508 SNW HYS+PAVDKALA+STAEFD A+REAILR +AK VS++ G+IPL+HY+N+WAAKKGL Sbjct: 443 SNWGHYSNPAVDKALAESTAEFDTARREAILRASAKVVSDDAGIIPLFHYRNVWAAKKGL 502 Query: 509 KVTPISSDRTTAMMVTEDKK 528 KVTP++SDRT AMMVT D K Sbjct: 503 KVTPMTSDRTAAMMVTRDGK 522 >emb|CCA83316.1| dipeptide transport protein [blood disease bacterium R229] Length = 525 Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/506 (78%), Positives = 450/506 (88%) Query: 23 ADAAHAQNLNIAFADPLSSLDPQLNNHAGDRSVDLHFWDLLVQNDYNKLVPGLAVSWKNI 82 ++ A AQ L+I FADPLSSLDPQLNNHAGDRSVD+HFWDLLV+N +NKL PGLA+SWK + Sbjct: 20 SNPAGAQALSIGFADPLSSLDPQLNNHAGDRSVDVHFWDLLVENKWNKLQPGLALSWKPL 79 Query: 83 DPKTWEFKLRPNVKWQDGKPFTADDVIFSYQRARAVPGSVATFAGYLRTVESVTAKDPLT 142 DPKTWEFKLRP VKW DGKPFTADDVIFSYQRAR+VPGSVATFAGYLRTVESVTAKDPLT Sbjct: 80 DPKTWEFKLRPGVKWHDGKPFTADDVIFSYQRARSVPGSVATFAGYLRTVESVTAKDPLT 139 Query: 143 LVIKTNIPNPDLPLNLASVHIVSKHIGEKSTTENYNSGAAVIGTGPYKFVSYTPGDRVVM 202 L+IKT IPNPDLPLNLASVHIVSKH+GEKS TE+YN+G AV GTGP+KFVSYTPGDRVVM Sbjct: 140 LIIKTTIPNPDLPLNLASVHIVSKHVGEKSNTEDYNAGRAVDGTGPFKFVSYTPGDRVVM 199 Query: 203 QRNDDYWNGKPLWEKVNYRYINNGAARTAALLSGDVDVIDKVSVSDLAKLKQSPNVKVYP 262 RND YW GK WEKVNYRYINN AARTA LLSG+VDVIDKVSV+DLA+L+QSPNVKVY Sbjct: 200 ARNDAYWGGKSPWEKVNYRYINNAAARTANLLSGEVDVIDKVSVADLARLRQSPNVKVYA 259 Query: 263 YNGLRVLLIQPSFHQGPSPFITDNNGKQLDKNPLLDVRVRRAMSLAINRKALIDRILQGA 322 Y GLRV+L+QPSF QGP+ ++T N+GK L NPLLDV VRRA+SLAI+RKA++DRILQ A Sbjct: 260 YPGLRVMLLQPSFRQGPNEYLTGNDGKPLPNNPLLDVHVRRALSLAIDRKAIVDRILQSA 319 Query: 323 ATEANQWMPADTFGYNPEIKNIPFDAAQAKKLLADAGFPDGFKLTIHVPNDRYPQAPETM 382 AT A+QWMP DTFGYNPE+K+IP+D AQA+KLLADAGFP GF L +HVPNDRYPQ PET Sbjct: 320 ATVASQWMPTDTFGYNPEVKDIPYDPAQARKLLADAGFPQGFNLVMHVPNDRYPQGPETA 379 Query: 383 QAVAQFWTRIGIKTQVEVLPWAAYSSRANKNEFAVSVLAWGNGTGEASYALVNVLGSVDP 442 QAVAQFWTRIG+KT+VEV+PW+ Y+ RANKN++A+S+LAWGNGTGEASYALVNVL +VD Sbjct: 380 QAVAQFWTRIGVKTKVEVVPWSVYAGRANKNDYAMSMLAWGNGTGEASYALVNVLATVDT 439 Query: 443 KKGIGASNWNHYSSPAVDKALADSTAEFDAAKREAILRGAAKTVSEEVGVIPLYHYQNIW 502 KKG+GASNW HYS+ AVD AL ST EF+ KR AILR + K VS++VGV+PLYHYQN+W Sbjct: 440 KKGLGASNWGHYSNQAVDHALDASTEEFNTEKRAAILRHSVKLVSDDVGVLPLYHYQNVW 499 Query: 503 AAKKGLKVTPISSDRTTAMMVTEDKK 528 AAKKGLKVTP++SDRT AMMVT+D K Sbjct: 500 AAKKGLKVTPMTSDRTAAMMVTQDGK 525 >ref|YP_003752155.1| dipeptide transport protein [Ralstonia solanacearum PSI07] emb|CBJ50867.1| dipeptide transport protein [Ralstonia solanacearum PSI07] Length = 525 Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/506 (77%), Positives = 449/506 (88%) Query: 23 ADAAHAQNLNIAFADPLSSLDPQLNNHAGDRSVDLHFWDLLVQNDYNKLVPGLAVSWKNI 82 ++ A AQ L+I FADPLSSLDPQLNNHAGDRSVD+HFWDLLV+N +NKL PGLA+SWK + Sbjct: 20 SNPAGAQTLSIGFADPLSSLDPQLNNHAGDRSVDVHFWDLLVENKWNKLQPGLALSWKPL 79 Query: 83 DPKTWEFKLRPNVKWQDGKPFTADDVIFSYQRARAVPGSVATFAGYLRTVESVTAKDPLT 142 DPKTWEFKLRP VKW DGKPFTADDVIFSYQRAR+VPGSVATFAGYLRTVESVTAKDPLT Sbjct: 80 DPKTWEFKLRPGVKWHDGKPFTADDVIFSYQRARSVPGSVATFAGYLRTVESVTAKDPLT 139 Query: 143 LVIKTNIPNPDLPLNLASVHIVSKHIGEKSTTENYNSGAAVIGTGPYKFVSYTPGDRVVM 202 L+IKT IPNPDLPLNLASVHIVSKH+GEKS TE+YN+G AV GTGP+KFVSYTPGDRVVM Sbjct: 140 LIIKTTIPNPDLPLNLASVHIVSKHVGEKSNTEDYNAGRAVDGTGPFKFVSYTPGDRVVM 199 Query: 203 QRNDDYWNGKPLWEKVNYRYINNGAARTAALLSGDVDVIDKVSVSDLAKLKQSPNVKVYP 262 RND YW GK WEKVNYRYINN AARTA LLSG+VDVIDKVSV+DLA+L+QSPNVKVY Sbjct: 200 ARNDAYWGGKSPWEKVNYRYINNAAARTANLLSGEVDVIDKVSVADLARLRQSPNVKVYA 259 Query: 263 YNGLRVLLIQPSFHQGPSPFITDNNGKQLDKNPLLDVRVRRAMSLAINRKALIDRILQGA 322 Y GLRV+L+QPSF QGP+ ++T N+GK L NPLLDV VRRA+SLAI+RKA++DRILQ A Sbjct: 260 YPGLRVMLLQPSFRQGPNEYLTGNDGKPLPNNPLLDVHVRRALSLAIDRKAIVDRILQSA 319 Query: 323 ATEANQWMPADTFGYNPEIKNIPFDAAQAKKLLADAGFPDGFKLTIHVPNDRYPQAPETM 382 AT A+QWMP DTFGYNPE+K+IP+D AQA+KLLADAGFP GF L +HVPNDRYPQ PET Sbjct: 320 ATVASQWMPTDTFGYNPEVKDIPYDPAQARKLLADAGFPQGFNLVMHVPNDRYPQGPETA 379 Query: 383 QAVAQFWTRIGIKTQVEVLPWAAYSSRANKNEFAVSVLAWGNGTGEASYALVNVLGSVDP 442 QAVAQFWTRIG+KT+VEV+PW+ Y+ RANKN++A+S+LAWGNGTGEASYALVNVL +VD Sbjct: 380 QAVAQFWTRIGVKTKVEVVPWSVYAGRANKNDYAMSMLAWGNGTGEASYALVNVLATVDT 439 Query: 443 KKGIGASNWNHYSSPAVDKALADSTAEFDAAKREAILRGAAKTVSEEVGVIPLYHYQNIW 502 K G+GASNW HYS+ AVD AL ST EF+ KR AILR + K VS++VGV+PLYHYQN+W Sbjct: 440 KNGLGASNWGHYSNQAVDHALDASTEEFNTEKRAAILRHSVKLVSDDVGVLPLYHYQNVW 499 Query: 503 AAKKGLKVTPISSDRTTAMMVTEDKK 528 AAKKGLKVTP++SDRT AMMVT+D K Sbjct: 500 AAKKGLKVTPMTSDRTAAMMVTQDGK 525