BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0101.p (229 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774980.1| metal ion ABC transporter permease [Herbaspi... 437 e-121 ref|YP_002355103.1| binding-protein-dependent transporters inner... 296 1e-78 gb|ADP99668.1| binding-protein-dependent transport systems inner... 289 3e-76 ref|YP_957545.1| binding-protein-dependent transport systems inn... 288 4e-76 ref|ZP_01895574.1| Binding-protein-dependent transport systems i... 288 5e-76 ref|ZP_01736472.1| Binding-protein-dependent transport systems i... 288 6e-76 ref|YP_004752201.1| methionine ABC transporter permease [Collimo... 281 4e-74 ref|YP_002769943.1| methionine ABC transporter permease [Breviba... 271 4e-71 ref|YP_004476369.1| binding-protein-dependent transport systems ... 269 3e-70 ref|ZP_08508538.1| D-methionine transport system permease protei... 263 1e-68 >ref|YP_003774980.1| metal ion ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ63072.1| ABC-type metal ion transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 229 Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust. Identities = 229/229 (100%), Positives = 229/229 (100%) Query: 1 MSALSSLFSQIDLSVIDWGEVGDATLETLAMTGGSLFFTVLLGLPLGILLFLTNRRQLLE 60 MSALSSLFSQIDLSVIDWGEVGDATLETLAMTGGSLFFTVLLGLPLGILLFLTNRRQLLE Sbjct: 1 MSALSSLFSQIDLSVIDWGEVGDATLETLAMTGGSLFFTVLLGLPLGILLFLTNRRQLLE 60 Query: 61 QRGLYLVLSLVVNVLRSVPFLILLIMLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLT 120 QRGLYLVLSLVVNVLRSVPFLILLIMLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLT Sbjct: 61 QRGLYLVLSLVVNVLRSVPFLILLIMLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLT 120 Query: 121 ESVLREIDRGILEACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIG 180 ESVLREIDRGILEACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIG Sbjct: 121 ESVLREIDRGILEACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIG 180 Query: 181 GGGLGDLAIRYGYQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 229 GGGLGDLAIRYGYQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK Sbjct: 181 GGGLGDLAIRYGYQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 229 >ref|YP_002355103.1| binding-protein-dependent transporters inner membrane component [Thauera sp. MZ1T] gb|ACK54207.1| binding-protein-dependent transport systems inner membrane component [Thauera sp. MZ1T] Length = 219 Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 173/219 (78%), Positives = 197/219 (89%) Query: 11 IDLSVIDWGEVGDATLETLAMTGGSLFFTVLLGLPLGILLFLTNRRQLLEQRGLYLVLSL 70 +DLSVIDW ++ AT ETL MTG SL FT+LLGLPLGILLF+T RRQLLEQ +Y VLS Sbjct: 1 MDLSVIDWSDIWIATWETLVMTGVSLLFTILLGLPLGILLFVTARRQLLEQGFVYTVLSF 60 Query: 71 VVNVLRSVPFLILLIMLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDRG 130 VVNVLRSVPFLILLI++IP T+ L+GTSLGV GAIPPLV+GTAPFFARL E+VLRE+DRG Sbjct: 61 VVNVLRSVPFLILLIVMIPVTVILIGTSLGVEGAIPPLVVGTAPFFARLVENVLREVDRG 120 Query: 131 ILEACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIGGGGLGDLAIR 190 ++EAC AMG R +IIFGALLPEALPGL+AAVT+TAITLMSYAAMSGVIGGGGLGDLAIR Sbjct: 121 VIEACQAMGIRTHRIIFGALLPEALPGLIAAVTVTAITLMSYAAMSGVIGGGGLGDLAIR 180 Query: 191 YGYQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 229 +GYQRFQTEVMV+TVA+LVVLVQ++Q+ GDRLVL FTRK Sbjct: 181 FGYQRFQTEVMVITVALLVVLVQIIQYSGDRLVLYFTRK 219 >gb|ADP99668.1| binding-protein-dependent transport systems inner membrane component [Marinobacter adhaerens HP15] Length = 221 Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 157/217 (72%), Positives = 187/217 (86%) Query: 13 LSVIDWGEVGDATLETLAMTGGSLFFTVLLGLPLGILLFLTNRRQLLEQRGLYLVLSLVV 72 LS +DW E+G A+ +TL M G SL F+VL+GLP+G+LLFL +RQLLEQ Y VLS VV Sbjct: 5 LSNVDWTEIGWASWDTLVMVGMSLLFSVLIGLPIGVLLFLFGKRQLLEQPVAYAVLSFVV 64 Query: 73 NVLRSVPFLILLIMLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDRGIL 132 NVLRSVPF+ILLI++IPFT+ L+GTSLGV GAIPPLV G APFFARL E+ LRE+DRGI+ Sbjct: 65 NVLRSVPFIILLIVMIPFTVMLIGTSLGVAGAIPPLVAGGAPFFARLVETSLREVDRGII 124 Query: 133 EACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIGGGGLGDLAIRYG 192 EA AMGA +QIIFGALLPEALPG++A +T+TAITL+SYAAMSGVIGGGGLGDLAIR+G Sbjct: 125 EATQAMGASVKQIIFGALLPEALPGIIAGITVTAITLVSYAAMSGVIGGGGLGDLAIRFG 184 Query: 193 YQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 229 YQRFQT+VMV+TVA+LV+ VQ+LQ GDRLVL F+RK Sbjct: 185 YQRFQTDVMVITVALLVIFVQVLQMVGDRLVLYFSRK 221 >ref|YP_957545.1| binding-protein-dependent transport systems inner membrane component [Marinobacter aquaeolei VT8] gb|ABM17358.1| binding-protein-dependent transport systems inner membrane component [Marinobacter aquaeolei VT8] Length = 225 Score = 288 bits (737), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 154/214 (71%), Positives = 186/214 (86%) Query: 16 IDWGEVGDATLETLAMTGGSLFFTVLLGLPLGILLFLTNRRQLLEQRGLYLVLSLVVNVL 75 +DW E+G A+ +TL M G SL F+VL+GLP+G+LLFLT +RQLLEQ Y +LS +VNVL Sbjct: 12 VDWAEIGWASWDTLVMVGMSLLFSVLIGLPIGVLLFLTGKRQLLEQPVAYAILSFIVNVL 71 Query: 76 RSVPFLILLIMLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDRGILEAC 135 RSVPF+ILLI++IPFT+ L+GTSLGV GAIPPLV G APFFARL E+ LRE++RGI+EA Sbjct: 72 RSVPFIILLIVMIPFTVMLIGTSLGVAGAIPPLVAGGAPFFARLVETSLREVERGIIEAT 131 Query: 136 TAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIGGGGLGDLAIRYGYQR 195 AMGA RQIIFGALLPEALPG++A +T+TAITL+SYAAMSGVIGGGGLGDLAIR+GYQR Sbjct: 132 QAMGANVRQIIFGALLPEALPGIIAGITVTAITLVSYAAMSGVIGGGGLGDLAIRFGYQR 191 Query: 196 FQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 229 FQT+VMV+TVA+LV+ VQ+LQ GDRLVL F+RK Sbjct: 192 FQTDVMVITVALLVIFVQVLQMAGDRLVLYFSRK 225 >ref|ZP_01895574.1| Binding-protein-dependent transport systems inner membrane component [Marinobacter algicola DG893] gb|EDM46338.1| Binding-protein-dependent transport systems inner membrane component [Marinobacter algicola DG893] Length = 225 Score = 288 bits (736), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 156/217 (71%), Positives = 187/217 (86%) Query: 13 LSVIDWGEVGDATLETLAMTGGSLFFTVLLGLPLGILLFLTNRRQLLEQRGLYLVLSLVV 72 LS +DW E+G A+ +TL M G SL F+VL+GLP+G+LLFL +RQLLEQ Y VLS VV Sbjct: 9 LSNVDWTEIGWASWDTLVMVGMSLLFSVLIGLPVGVLLFLFGKRQLLEQPIAYAVLSFVV 68 Query: 73 NVLRSVPFLILLIMLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDRGIL 132 NVLRSVPF+ILLI++IPFT+ L+GTSLGV GAIPPLV G APFFARL E+ LRE+DRGI+ Sbjct: 69 NVLRSVPFIILLIVMIPFTVMLIGTSLGVAGAIPPLVAGGAPFFARLVETSLREVDRGII 128 Query: 133 EACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIGGGGLGDLAIRYG 192 EA AMGA +QI+FGALLPEALPG++A +T+TAITL+SYAAMSGV+GGGGLGDLAIR+G Sbjct: 129 EATQAMGATVKQIVFGALLPEALPGIIAGITVTAITLVSYAAMSGVVGGGGLGDLAIRFG 188 Query: 193 YQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 229 YQRFQT+VMV+TVA+LV+ VQLLQ GDRLVL F+RK Sbjct: 189 YQRFQTDVMVITVALLVIFVQLLQMAGDRLVLYFSRK 225 >ref|ZP_01736472.1| Binding-protein-dependent transport systems inner membrane component [Marinobacter sp. ELB17] gb|EBA00734.1| Binding-protein-dependent transport systems inner membrane component [Marinobacter sp. ELB17] Length = 225 Score = 288 bits (736), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 155/217 (71%), Positives = 186/217 (85%) Query: 13 LSVIDWGEVGDATLETLAMTGGSLFFTVLLGLPLGILLFLTNRRQLLEQRGLYLVLSLVV 72 LS +DW E+G A+ +TL M SL F+V++GLP+G+LLFL +RQLLEQ Y VLS VV Sbjct: 9 LSNVDWVEIGIASWDTLIMVAMSLLFSVVIGLPIGVLLFLFGKRQLLEQPLAYAVLSFVV 68 Query: 73 NVLRSVPFLILLIMLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDRGIL 132 NVLRSVPF+ILLI++IPFT+ ++GTSLGV GAIPPLV G APFFARL E+ LRE+DRGI+ Sbjct: 69 NVLRSVPFIILLIVMIPFTVMMIGTSLGVAGAIPPLVAGGAPFFARLVETSLREVDRGII 128 Query: 133 EACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIGGGGLGDLAIRYG 192 EA AMGA RQI+FGALLPEALPG++A VT+TAITL+SYAAMSGVIGGGGLGDLAIR+G Sbjct: 129 EATQAMGANVRQIVFGALLPEALPGIIAGVTVTAITLVSYAAMSGVIGGGGLGDLAIRFG 188 Query: 193 YQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 229 YQRFQT+VMV+TVA+LV+ VQLLQ GDRLV+ F+RK Sbjct: 189 YQRFQTDVMVITVALLVIFVQLLQMLGDRLVIHFSRK 225 >ref|YP_004752201.1| methionine ABC transporter permease [Collimonas fungivorans Ter331] gb|AEK61378.1| Methionine ABC transporter permease protein [Collimonas fungivorans Ter331] Length = 219 Score = 281 bits (720), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 177/219 (80%), Positives = 197/219 (89%) Query: 11 IDLSVIDWGEVGDATLETLAMTGGSLFFTVLLGLPLGILLFLTNRRQLLEQRGLYLVLSL 70 +D S+IDWG++ AT ETLAMTG SL FT+LLGLPLGILLF+T +RQLLEQRG+Y LSL Sbjct: 1 MDFSLIDWGDIWQATWETLAMTGFSLLFTILLGLPLGILLFITGKRQLLEQRGIYRALSL 60 Query: 71 VVNVLRSVPFLILLIMLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDRG 130 VVNVLRSVPFLILLI++IP T+ LVGTSLGV GAIPPLV+GTAPFFARL E+VLREIDRG Sbjct: 61 VVNVLRSVPFLILLIVMIPVTVILVGTSLGVQGAIPPLVLGTAPFFARLVENVLREIDRG 120 Query: 131 ILEACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIGGGGLGDLAIR 190 ++EAC AMGA +RQIIFGALLPEALPGL+AA T+TAI LMSYAAMSGVIGGGGLGDLAIR Sbjct: 121 VVEACQAMGANKRQIIFGALLPEALPGLIAATTVTAIALMSYAAMSGVIGGGGLGDLAIR 180 Query: 191 YGYQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 229 +GYQRFQTEVMV TVA+LVVLVQ LQF GDRLV FTRK Sbjct: 181 FGYQRFQTEVMVTTVAVLVVLVQALQFSGDRLVQHFTRK 219 >ref|YP_002769943.1| methionine ABC transporter permease [Brevibacillus brevis NBRC 100599] dbj|BAH41439.1| methionine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 221 Score = 271 bits (694), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 145/214 (67%), Positives = 177/214 (82%) Query: 16 IDWGEVGDATLETLAMTGGSLFFTVLLGLPLGILLFLTNRRQLLEQRGLYLVLSLVVNVL 75 +DW E+G+ T++TL M G S FTVL+GLPLGI+LFLT+R QLL+ R Y + S VVNVL Sbjct: 8 VDWAEIGEGTMDTLTMLGFSTLFTVLIGLPLGIILFLTSRGQLLQNRTFYTIASFVVNVL 67 Query: 76 RSVPFLILLIMLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDRGILEAC 135 RSVPF+IL+I+LIP T +VGTSLGV GAIPPLV G APFFARL E+ LREID+G++EA Sbjct: 68 RSVPFIILMILLIPVTKMIVGTSLGVLGAIPPLVFGAAPFFARLVETSLREIDKGVIEAA 127 Query: 136 TAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIGGGGLGDLAIRYGYQR 195 +MGA QI++ LLPE+ GL+A +TIT +TL+SY AMSGVIGGGGLGDLAIRYGYQR Sbjct: 128 QSMGASNWQIVWNVLLPESRSGLIAGITITTVTLVSYTAMSGVIGGGGLGDLAIRYGYQR 187 Query: 196 FQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 229 FQT+VMVVTV IL+V+VQ+LQ GDRLVL+F+RK Sbjct: 188 FQTDVMVVTVVILLVMVQILQSLGDRLVLKFSRK 221 >ref|YP_004476369.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas fulva 12-X] gb|AEF24275.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas fulva 12-X] Length = 221 Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 154/217 (70%), Positives = 185/217 (85%) Query: 13 LSVIDWGEVGDATLETLAMTGGSLFFTVLLGLPLGILLFLTNRRQLLEQRGLYLVLSLVV 72 L +DW E+ A+++TL M GGS+ FTVL GLPLG+LLFLT RQ+ EQ+GLY V+SLVV Sbjct: 5 LPNVDWLEIWQASIDTLNMLGGSMLFTVLFGLPLGVLLFLTGPRQMFEQKGLYAVISLVV 64 Query: 73 NVLRSVPFLILLIMLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDRGIL 132 NVLRSVPF+ILLI+LIP T+ + GTSLGV GAIPPLV+G PFFARL E+ LRE+DRGI+ Sbjct: 65 NVLRSVPFVILLILLIPVTVVITGTSLGVAGAIPPLVVGATPFFARLVETALREVDRGII 124 Query: 133 EACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIGGGGLGDLAIRYG 192 EA +MGA RQIIF ALLPEALPG+LAA+T+TAITL+SY AMSG+IGGGGLGDLA+RYG Sbjct: 125 EATQSMGASTRQIIFNALLPEALPGILAAITVTAITLVSYTAMSGLIGGGGLGDLAVRYG 184 Query: 193 YQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 229 YQR+Q +VM VTVA+LVVLVQ+LQ GDRLV+ F+RK Sbjct: 185 YQRYQPDVMFVTVALLVVLVQILQTIGDRLVVHFSRK 221 >ref|ZP_08508538.1| D-methionine transport system permease protein MetI [Paenibacillus sp. HGF7] gb|EGL18852.1| D-methionine transport system permease protein MetI [Paenibacillus sp. HGF7] Length = 219 Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 141/219 (64%), Positives = 173/219 (78%) Query: 11 IDLSVIDWGEVGDATLETLAMTGGSLFFTVLLGLPLGILLFLTNRRQLLEQRGLYLVLSL 70 +D S IDW E+G AT +T+ M G S FT ++GLP+G+LL+LT++ LLE R +V+S Sbjct: 1 MDWSKIDWSEIGTATNDTMMMLGLSALFTFVIGLPIGVLLYLTSKGSLLENRTFNIVISF 60 Query: 71 VVNVLRSVPFLILLIMLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDRG 130 +VNVLRS PF+IL+I IP T LVGTS+GV G IPPLVI APFFARL E+ LRE+DRG Sbjct: 61 IVNVLRSFPFIILMIAAIPLTKLLVGTSIGVKGTIPPLVIAAAPFFARLVETALREVDRG 120 Query: 131 ILEACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIGGGGLGDLAIR 190 I+EA +MGA R QI+ LLPEALPGL+A +TIT +TL+SY AMSG++GGGGLGDLAIR Sbjct: 121 IIEAAQSMGAGRFQIVRRVLLPEALPGLIAGITITTVTLVSYTAMSGMVGGGGLGDLAIR 180 Query: 191 YGYQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 229 YGYQRFQTEVM+ TV IL++LVQ+LQ GDR VL FTRK Sbjct: 181 YGYQRFQTEVMIATVVILLILVQILQMIGDRFVLYFTRK 219