BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0084.p (513 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774965.1| fumarate hydratase [Herbaspirillum seropedic... 1058 0.0 ref|YP_004754000.1| fumarate hydratase class I, aerobic [Collimo... 993 0.0 ref|YP_001352570.1| fumarate hydratase, class I [Janthinobacteri... 957 0.0 ref|YP_001099230.1| fumarase A [Herminiimonas arsenicoxydans] >g... 949 0.0 ref|YP_001020579.1| fumarase [Methylibium petroleiphilum PM1] >g... 911 0.0 ref|YP_001792090.1| tartrate/fumarate subfamily Fe-S type hydro-... 889 0.0 ref|YP_002552452.1| hydro-lyase, fe-s type, tartrate/fumarate su... 883 0.0 ref|YP_985367.1| fumarase [Acidovorax sp. JS42] >gi|120605551|gb... 883 0.0 ref|ZP_08401505.1| tartrate/fumarate subfamily Fe-S type hydro-l... 875 0.0 gb|EFV82941.1| fumarate hydratase class I anaerobic [Achromobact... 874 0.0 >ref|YP_003774965.1| fumarate hydratase [Herbaspirillum seropedicae SmR1] emb|CAM32536.1| Fumarate hydratase protein [Herbaspirillum seropedicae] gb|ADJ63057.1| fumarate hydratase protein [Herbaspirillum seropedicae SmR1] Length = 513 Score = 1058 bits (2737), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/513 (100%), Positives = 513/513 (100%) Query: 1 MTIIKQDDLIESVAAALQYISYYHPADYIQHLARAYETEQSPAAKDAIAQILTNSRMCAE 60 MTIIKQDDLIESVAAALQYISYYHPADYIQHLARAYETEQSPAAKDAIAQILTNSRMCAE Sbjct: 1 MTIIKQDDLIESVAAALQYISYYHPADYIQHLARAYETEQSPAAKDAIAQILTNSRMCAE 60 Query: 61 GKRPICQDTGIVNVFLKIGMGVRFEGFSGSIADAVNEGVRRGYSHPDNVLRASIVADPQF 120 GKRPICQDTGIVNVFLKIGMGVRFEGFSGSIADAVNEGVRRGYSHPDNVLRASIVADPQF Sbjct: 61 GKRPICQDTGIVNVFLKIGMGVRFEGFSGSIADAVNEGVRRGYSHPDNVLRASIVADPQF 120 Query: 121 ERKNTKDNTPAVIHMELVPGNTVDVQIAAKGGGSENKTKFVMLNPSDNLVDWVLKTVPTM 180 ERKNTKDNTPAVIHMELVPGNTVDVQIAAKGGGSENKTKFVMLNPSDNLVDWVLKTVPTM Sbjct: 121 ERKNTKDNTPAVIHMELVPGNTVDVQIAAKGGGSENKTKFVMLNPSDNLVDWVLKTVPTM 180 Query: 181 GAGWCPPGMLGIGIGGTAEKAMLMAKEVLMEDIDMYELLKRGPQNKTEELRIELYEKVNA 240 GAGWCPPGMLGIGIGGTAEKAMLMAKEVLMEDIDMYELLKRGPQNKTEELRIELYEKVNA Sbjct: 181 GAGWCPPGMLGIGIGGTAEKAMLMAKEVLMEDIDMYELLKRGPQNKTEELRIELYEKVNA 240 Query: 241 LGIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRHGHFVLDGSGPAYMEPPSL 300 LGIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRHGHFVLDGSGPAYMEPPSL Sbjct: 241 LGIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRHGHFVLDGSGPAYMEPPSL 300 Query: 301 SDWPEVHWVADTEKSKRVNLDTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQDMLAK 360 SDWPEVHWVADTEKSKRVNLDTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQDMLAK Sbjct: 301 SDWPEVHWVADTEKSKRVNLDTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQDMLAK 360 Query: 361 GEKLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTDMMLEQTGLISMIGKSER 420 GEKLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTDMMLEQTGLISMIGKSER Sbjct: 361 GEKLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTDMMLEQTGLISMIGKSER 420 Query: 421 GPAAIEAIKKHKSAYLMAVGGSAYLVSKAIKSAKVLGFADLGMEAIYEFDVKDMPVTVAV 480 GPAAIEAIKKHKSAYLMAVGGSAYLVSKAIKSAKVLGFADLGMEAIYEFDVKDMPVTVAV Sbjct: 421 GPAAIEAIKKHKSAYLMAVGGSAYLVSKAIKSAKVLGFADLGMEAIYEFDVKDMPVTVAV 480 Query: 481 DANGVSVHNTGPAEWKEKIAQSVSLSKIPVTTA 513 DANGVSVHNTGPAEWKEKIAQSVSLSKIPVTTA Sbjct: 481 DANGVSVHNTGPAEWKEKIAQSVSLSKIPVTTA 513 >ref|YP_004754000.1| fumarate hydratase class I, aerobic [Collimonas fungivorans Ter331] gb|AEK63177.1| Fumarate hydratase class I, aerobic [Collimonas fungivorans Ter331] Length = 518 Score = 993 bits (2568), Expect = 0.0, Method: Compositional matrix adjust. Identities = 474/511 (92%), Positives = 499/511 (97%), Gaps = 1/511 (0%) Query: 1 MTIIKQDDLIESVAAALQYISYYHPADYIQHLARAYETEQSPAAKDAIAQILTNSRMCAE 60 +T IKQ+DLIESVAAALQYISYYHP DYIQHLARAYE EQSPAAKDAIAQILTNSRMCAE Sbjct: 7 LTTIKQEDLIESVAAALQYISYYHPVDYIQHLARAYEQEQSPAAKDAIAQILTNSRMCAE 66 Query: 61 GKRPICQDTGIVNVFLKIGMGVRFEGFSGSIADAVNEGVRRGYSHPDNVLRASIVADPQF 120 GKRPICQDTGIVNVFLKIGM VRFEGF GSI DAVNEGVRRGY +PDN+LRASIVADPQF Sbjct: 67 GKRPICQDTGIVNVFLKIGMDVRFEGFKGSITDAVNEGVRRGYLNPDNMLRASIVADPQF 126 Query: 121 ERKNTKDNTPAVIHMELVPGNTVDVQIAAKGGGSENKTKFVMLNPSDNLVDWVLKTVPTM 180 ERKNTKDNTPAV+HMELVPGNTVDVQIAAKGGGSENKTKFVMLNPSD+LVDWV+KTVPTM Sbjct: 127 ERKNTKDNTPAVVHMELVPGNTVDVQIAAKGGGSENKTKFVMLNPSDSLVDWVMKTVPTM 186 Query: 181 GAGWCPPGMLGIGIGGTAEKAMLMAKEVLMEDIDMYELLKRGPQNKTEELRIELYEKVNA 240 GAGWCPPGMLGIGIGGTAE+AMLMAK+VLMEDIDMY+LLKRGPQNKTEELRIEL++KVNA Sbjct: 187 GAGWCPPGMLGIGIGGTAERAMLMAKQVLMEDIDMYDLLKRGPQNKTEELRIELFQKVNA 246 Query: 241 LGIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRHGHFVLDGSGPAYMEPPSL 300 LGIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRHGHFVLDGSGPAYMEPPSL Sbjct: 247 LGIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRHGHFVLDGSGPAYMEPPSL 306 Query: 301 SDWPEVHWVADTEKSKRVNLDTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQDMLAK 360 S+WPEVHWV DTEKSKRV+L+TLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQ+MLAK Sbjct: 307 SEWPEVHWVPDTEKSKRVDLNTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQEMLAK 366 Query: 361 GEKLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTDMMLEQTGLISMIGKSER 420 GEKLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTDMMLEQTGLISMIGKSER Sbjct: 367 GEKLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTDMMLEQTGLISMIGKSER 426 Query: 421 GPAAIEAIKKHKSAYLMAVGGSAYLVSKAIKSAKVLGFADLGMEAIYEFDVKDMPVTVAV 480 GP AIE+IK+HKSAYLMAVGG+AYLVSKAIKSA+VLGFADLGMEAIYEFDVKDMPVTVAV Sbjct: 427 GPVAIESIKQHKSAYLMAVGGAAYLVSKAIKSAQVLGFADLGMEAIYEFDVKDMPVTVAV 486 Query: 481 DANGVSVHNTGPAEWKEKIAQSVSLSKIPVT 511 D+NG+SVHNTGP EW+EKIA + +LSKIPVT Sbjct: 487 DSNGISVHNTGPKEWQEKIAHA-ALSKIPVT 516 >ref|YP_001352570.1| fumarate hydratase, class I [Janthinobacterium sp. Marseille] gb|ABR89454.1| fumarate hydratase, class I [Janthinobacterium sp. Marseille] Length = 512 Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust. Identities = 451/511 (88%), Positives = 487/511 (95%), Gaps = 1/511 (0%) Query: 1 MTIIKQDDLIESVAAALQYISYYHPADYIQHLARAYETEQSPAAKDAIAQILTNSRMCAE 60 MTIIKQDDLIESVAAALQYISYYHP DYIQHLARAYE EQSPAAKDAIAQILTNSRMCAE Sbjct: 1 MTIIKQDDLIESVAAALQYISYYHPQDYIQHLARAYEAEQSPAAKDAIAQILTNSRMCAE 60 Query: 61 GKRPICQDTGIVNVFLKIGMGVRFEGFSGSIADAVNEGVRRGYSHPDNVLRASIVADPQF 120 GKRP+CQDTGIVNVFLK+GMGVRFEGFSGS+ DAVNEGVR+ Y+HPDN LRASIVADP F Sbjct: 61 GKRPLCQDTGIVNVFLKVGMGVRFEGFSGSVTDAVNEGVRQAYNHPDNTLRASIVADPHF 120 Query: 121 ERKNTKDNTPAVIHMELVPGNTVDVQIAAKGGGSENKTKFVMLNPSDNLVDWVLKTVPTM 180 ERKNTKDNTPAV+H+ELVPGNTVDVQ+AAKGGGSENKTKFVMLNPSD+LVDWV++TVP M Sbjct: 121 ERKNTKDNTPAVVHVELVPGNTVDVQVAAKGGGSENKTKFVMLNPSDSLVDWVMQTVPLM 180 Query: 181 GAGWCPPGMLGIGIGGTAEKAMLMAKEVLMEDIDMYELLKRGPQNKTEELRIELYEKVNA 240 GAGWCPPGMLGIGIGGTAE+AMLMAK+VLMEDIDMYEL KRGPQNKTEELRIEL +K+N+ Sbjct: 181 GAGWCPPGMLGIGIGGTAERAMLMAKQVLMEDIDMYELKKRGPQNKTEELRIELCDKINS 240 Query: 241 LGIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRHGHFVLDGSGPAYMEPPSL 300 LGIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRH HFVLDGSGP Y++PP+L Sbjct: 241 LGIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRHAHFVLDGSGPVYLDPPAL 300 Query: 301 SDWPEVHWVADTEKSKRVNLDTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQDMLAK 360 SDWP+V+W+ DTE+SKRV+L+TLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQDMLAK Sbjct: 301 SDWPKVNWMPDTEQSKRVDLNTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQDMLAK 360 Query: 361 GEKLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTDMMLEQTGLISMIGKSER 420 GEKLPVDFTNR+IYYVGPVDPVRDEVVGPAGPTTATRMDKFT+MML QTGLISM+GK+ER Sbjct: 361 GEKLPVDFTNRIIYYVGPVDPVRDEVVGPAGPTTATRMDKFTEMMLAQTGLISMVGKAER 420 Query: 421 GPAAIEAIKKHKSAYLMAVGGSAYLVSKAIKSAKVLGFADLGMEAIYEFDVKDMPVTVAV 480 GP AIEAIKKHKSAYLMAVGG+AYLVSKAIK AKVLGF DLGMEAIYEFDV+DMPVTVAV Sbjct: 421 GPTAIEAIKKHKSAYLMAVGGAAYLVSKAIKKAKVLGFEDLGMEAIYEFDVQDMPVTVAV 480 Query: 481 DANGVSVHNTGPAEWKEKIAQSVSLSKIPVT 511 D+ G SVH TGP EWKEKI + + L+ IPV+ Sbjct: 481 DSTGTSVHTTGPKEWKEKI-EKIRLNDIPVS 510 >ref|YP_001099230.1| fumarase A [Herminiimonas arsenicoxydans] emb|CAL61103.1| putative fumarate hydratase class I, aerobic (Fumarase) (FumA-like) [Herminiimonas arsenicoxydans] Length = 512 Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/510 (87%), Positives = 485/510 (95%), Gaps = 1/510 (0%) Query: 1 MTIIKQDDLIESVAAALQYISYYHPADYIQHLARAYETEQSPAAKDAIAQILTNSRMCAE 60 MTIIKQDDLIESVAAALQYISYYHP DYIQHLARAYE EQSPAAKDAIAQILTNSRMCAE Sbjct: 1 MTIIKQDDLIESVAAALQYISYYHPQDYIQHLARAYEAEQSPAAKDAIAQILTNSRMCAE 60 Query: 61 GKRPICQDTGIVNVFLKIGMGVRFEGFSGSIADAVNEGVRRGYSHPDNVLRASIVADPQF 120 GKRPICQDTGIVNVFLKIGM V+ EGF+GSIADAVNEGVR+ Y+HPDN LRASIVADP F Sbjct: 61 GKRPICQDTGIVNVFLKIGMSVKLEGFTGSIADAVNEGVRQAYNHPDNKLRASIVADPHF 120 Query: 121 ERKNTKDNTPAVIHMELVPGNTVDVQIAAKGGGSENKTKFVMLNPSDNLVDWVLKTVPTM 180 ERKNTKDNTPAV+HMELVPGNT+DVQ+AAKGGGSENK+KFVMLNPSD+LVDWV++TVP M Sbjct: 121 ERKNTKDNTPAVVHMELVPGNTIDVQVAAKGGGSENKSKFVMLNPSDSLVDWVMQTVPQM 180 Query: 181 GAGWCPPGMLGIGIGGTAEKAMLMAKEVLMEDIDMYELLKRGPQNKTEELRIELYEKVNA 240 GAGWCPPGMLGIGIGGTAE+AMLMAK+VLMEDIDMYEL KRGPQNKTEELRIEL +K+NA Sbjct: 181 GAGWCPPGMLGIGIGGTAERAMLMAKQVLMEDIDMYELKKRGPQNKTEELRIELCDKINA 240 Query: 241 LGIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRHGHFVLDGSGPAYMEPPSL 300 LGIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRH HFVLDGSGP Y++PPSL Sbjct: 241 LGIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRHAHFVLDGSGPVYLDPPSL 300 Query: 301 SDWPEVHWVADTEKSKRVNLDTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQDMLAK 360 SDWP+V+W +TE SKRV+L+TLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQDMLAK Sbjct: 301 SDWPDVNWAPNTELSKRVDLNTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQDMLAK 360 Query: 361 GEKLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTDMMLEQTGLISMIGKSER 420 GEKLPVDFTNR+IYYVGPVDPVRDEVVGPAGPTTATRMDKFT+MML QTGLISM+GK+ER Sbjct: 361 GEKLPVDFTNRIIYYVGPVDPVRDEVVGPAGPTTATRMDKFTEMMLAQTGLISMVGKAER 420 Query: 421 GPAAIEAIKKHKSAYLMAVGGSAYLVSKAIKSAKVLGFADLGMEAIYEFDVKDMPVTVAV 480 GP AIE+IKKH+SAYLMAVGG+AYLVSKAIK+AKV+GFADLGMEAIYEFDV DMPVTVAV Sbjct: 421 GPTAIESIKKHQSAYLMAVGGAAYLVSKAIKTAKVVGFADLGMEAIYEFDVTDMPVTVAV 480 Query: 481 DANGVSVHNTGPAEWKEKIAQSVSLSKIPV 510 D+ G SVHN GP EWK+KI + + L++IPV Sbjct: 481 DSTGTSVHNIGPKEWKDKI-EKIRLNEIPV 509 >ref|YP_001020579.1| fumarase [Methylibium petroleiphilum PM1] gb|ABM94344.1| fumarase [Methylibium petroleiphilum PM1] Length = 507 Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/513 (85%), Positives = 467/513 (91%), Gaps = 6/513 (1%) Query: 1 MTIIKQDDLIESVAAALQYISYYHPADYIQHLARAYETEQSPAAKDAIAQILTNSRMCAE 60 MT I+ DL++S+AAALQYISYYHPADYI HLARAYE EQSPAAKDAIAQILTNS+MCAE Sbjct: 1 MTTIRHADLVDSIAAALQYISYYHPADYITHLARAYEQEQSPAAKDAIAQILTNSKMCAE 60 Query: 61 GKRPICQDTGIVNVFLKIGMGVRFEGFSGSIADAVNEGVRRGYSHPDNVLRASIVADPQF 120 G+RPICQDTGIVNVFLKIGM VRFEGF+GSI DAVNEGVRRGY +P+N LRASIVADP F Sbjct: 61 GRRPICQDTGIVNVFLKIGMDVRFEGFAGSIEDAVNEGVRRGYLNPENTLRASIVADPHF 120 Query: 121 ERKNTKDNTPAVIHMELVPGNTVDVQIAAKGGGSENKTKFVMLNPSDNLVDWVLKTVPTM 180 ERKNTKDNTPAV+HM +VPGNTVDVQ+AAKGGGSENK+KFVMLNPSD+LVDWVLKTVPTM Sbjct: 121 ERKNTKDNTPAVVHMTVVPGNTVDVQVAAKGGGSENKSKFVMLNPSDSLVDWVLKTVPTM 180 Query: 181 GAGWCPPGMLGIGIGGTAEKAMLMAKEVLMEDIDMYELLKRGPQNKTEELRIELYEKVNA 240 GAGWCPPGMLGIGIGG+AEKAMLMAKE LM DIDMYEL +RGPQNK EELRIEL +K+NA Sbjct: 181 GAGWCPPGMLGIGIGGSAEKAMLMAKESLMGDIDMYELKQRGPQNKLEELRIELCDKINA 240 Query: 241 LGIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRHGHFVLDGSGPAYMEPPSL 300 LGIGAQGLGGLTTVLDVKI PTHAASKPVAMIPNCAATRH HFVLDGSGP+Y+EPPSL Sbjct: 241 LGIGAQGLGGLTTVLDVKISTFPTHAASKPVAMIPNCAATRHAHFVLDGSGPSYLEPPSL 300 Query: 301 SDWPEVHWVADTEKSKRVNLDTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQDMLAK 360 WP+V W D KSK VNLDTLT+EEVASWKPG TLLLNGKMLTGRDAAHKRIQDMLAK Sbjct: 301 DLWPDVKWAPDYNKSKSVNLDTLTREEVASWKPGDTLLLNGKMLTGRDAAHKRIQDMLAK 360 Query: 361 GEKLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTDMMLEQTGLISMIGKSER 420 GEKLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFT+MML QTGLI MIGK+ER Sbjct: 361 GEKLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTEMMLAQTGLIGMIGKAER 420 Query: 421 GPAAIEAIKKHKSAYLMAVGGSAYLVSKAIKSAKVLGFADLGMEAIYEFDVKDMPVTVAV 480 GPA IEAI+KHKSAYLMAVGG+AYLV+KAIK AKVLGFADLGMEAIYEFDVKDMPVTVAV Sbjct: 421 GPAGIEAIRKHKSAYLMAVGGAAYLVAKAIKQAKVLGFADLGMEAIYEFDVKDMPVTVAV 480 Query: 481 DANGVSVHNTGPAEWKEKIAQSVSLSKIPVTTA 513 D+ G SVH TGPAEW+ KI KIPV A Sbjct: 481 DSTGSSVHQTGPAEWQAKIG------KIPVAIA 507 >ref|YP_001792090.1| tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha [Leptothrix cholodnii SP-6] gb|ACB35325.1| hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit [Leptothrix cholodnii SP-6] Length = 508 Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/512 (84%), Positives = 462/512 (90%), Gaps = 6/512 (1%) Query: 2 TIIKQDDLIESVAAALQYISYYHPADYIQHLARAYETEQSPAAKDAIAQILTNSRMCAEG 61 T I+Q DLIESVAAALQYISYYHPADYI HLARAYE E SPAAKDAIAQILTNS+MCAEG Sbjct: 3 TTIRQADLIESVAAALQYISYYHPADYIAHLARAYEREASPAAKDAIAQILTNSKMCAEG 62 Query: 62 KRPICQDTGIVNVFLKIGMGVRFEGFSGSIADAVNEGVRRGYSHPDNVLRASIVADPQFE 121 RPICQDTGIVNVFLKIGM V++EGF+GSIADAVN GVR+GY +PDNVLRAS++ DP F Sbjct: 63 HRPICQDTGIVNVFLKIGMDVKWEGFTGSIADAVNAGVRQGYLNPDNVLRASVLDDPIFA 122 Query: 122 RKNTKDNTPAVIHMELVPGNTVDVQIAAKGGGSENKTKFVMLNPSDNLVDWVLKTVPTMG 181 RKNTKDNTPAVIHMELVPGNTVDV +AAKGGGSENK+K MLNPSDN+VDWVLKTVPTMG Sbjct: 123 RKNTKDNTPAVIHMELVPGNTVDVIVAAKGGGSENKSKMYMLNPSDNIVDWVLKTVPTMG 182 Query: 182 AGWCPPGMLGIGIGGTAEKAMLMAKEVLMEDIDMYELLKRGPQNKTEELRIELYEKVNAL 241 AGWCPPGMLGIG+GGTAEKA++MAKE LMEDIDMYELL+RGPQNK EELRIELYEKVNAL Sbjct: 183 AGWCPPGMLGIGVGGTAEKAVMMAKEALMEDIDMYELLERGPQNKLEELRIELYEKVNAL 242 Query: 242 GIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRHGHFVLDGSGPAYMEPPSLS 301 GIGAQGLGGLTTVLDVKI THAASKP+AMIPNCAATRHGHFVLDGSGPAYMEPPSL Sbjct: 243 GIGAQGLGGLTTVLDVKIKTFATHAASKPIAMIPNCAATRHGHFVLDGSGPAYMEPPSLD 302 Query: 302 DWPEVHWVADTEKSKRVNLDTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQDMLAKG 361 WP V W D KSKRV+L+TLTK EVASWKPG TLLLNGKMLTGRDAAHKRI DMLAKG Sbjct: 303 LWPNVAWAPDYNKSKRVDLNTLTKAEVASWKPGDTLLLNGKMLTGRDAAHKRINDMLAKG 362 Query: 362 EKLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTDMMLEQTGLISMIGKSERG 421 E LPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMD FT MMLE+TGLISM+GK+ERG Sbjct: 363 EPLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDGFTRMMLEKTGLISMVGKAERG 422 Query: 422 PAAIEAIKKHKSAYLMAVGGSAYLVSKAIKSAKVLGFADLGMEAIYEFDVKDMPVTVAVD 481 P AI+AIK ++SAYLMAVGG+AYLV+KAIK AKV+GFADLGMEAIYEFDVKDMPVTVAVD Sbjct: 423 PVAIQAIKDNQSAYLMAVGGAAYLVAKAIKGAKVVGFADLGMEAIYEFDVKDMPVTVAVD 482 Query: 482 ANGVSVHNTGPAEWKEKIAQSVSLSKIPVTTA 513 A+G SVHNTGP EW+ +I KIPV A Sbjct: 483 ASGTSVHNTGPKEWQARIG------KIPVVEA 508 >ref|YP_002552452.1| hydro-lyase, fe-s type, tartrate/fumarate subfamily subunit alpha [Acidovorax ebreus TPSY] gb|ACM32452.1| hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit [Acidovorax ebreus TPSY] Length = 519 Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/505 (83%), Positives = 465/505 (92%), Gaps = 6/505 (1%) Query: 2 TIIKQDDLIESVAAALQYISYYHPADYIQHLARAYETEQSPAAKDAIAQILTNSRMCAEG 61 T I+ +DL+ESVAAALQYISYYHPADYIQHLARAYE EQSPAAKDA+AQILTNS+M A G Sbjct: 3 TTIRYNDLVESVAAALQYISYYHPADYIQHLARAYEREQSPAAKDAMAQILTNSKMSATG 62 Query: 62 KRPICQDTGIVNVFLKIGMGVRFEGFSG--SIADAVNEGVRRGYSHPDNVLRASIVADPQ 119 RPICQDTGIVNVFLK+GMGVRFEGF+ S+ DA+NEGVRRGY+HPDN LRAS+VADPQ Sbjct: 63 HRPICQDTGIVNVFLKVGMGVRFEGFAADQSLEDAINEGVRRGYNHPDNTLRASVVADPQ 122 Query: 120 FERKNTKDNTPAVIHMELVPGNTVDVQIAAKGGGSENKTKFVMLNPSDNLVDWVLKTVPT 179 F RKNTKDNTPAVI +++VPG+T+DV +AAKGGGSENK+K VM+NPSDNLVDWVLKTVPT Sbjct: 123 FARKNTKDNTPAVISVQIVPGDTLDVTVAAKGGGSENKSKMVMMNPSDNLVDWVLKTVPT 182 Query: 180 MGAGWCPPGMLGIGIGGTAEKAMLMAKEVLMEDIDMYELL---KRGPQ-NKTEELRIELY 235 MGAGWCPPGMLGIGIGGTAEKA+L+AKE LMED+DMYELL +RG + ++ EELR+ELY Sbjct: 183 MGAGWCPPGMLGIGIGGTAEKAVLLAKESLMEDLDMYELLAKSQRGEKLDQVEELRLELY 242 Query: 236 EKVNALGIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRHGHFVLDGSGPAYM 295 EKVNALGIGAQGLGGL TVLDVKI M+PTHAASKPVAMIPNCAATRH HFV+DGSGP YM Sbjct: 243 EKVNALGIGAQGLGGLATVLDVKIKMYPTHAASKPVAMIPNCAATRHAHFVMDGSGPVYM 302 Query: 296 EPPSLSDWPEVHWVADTEKSKRVNLDTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQ 355 +PPSL WP+V W +TE SKRV+L+TLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQ Sbjct: 303 DPPSLDLWPKVDWAPNTETSKRVDLNTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQ 362 Query: 356 DMLAKGEKLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTDMMLEQTGLISMI 415 DMLAKGEKLPVDFTNRVIYYVGPVDPV+DE VGPAGPTTATRMDKFTDMMLEQTGLI+MI Sbjct: 363 DMLAKGEKLPVDFTNRVIYYVGPVDPVKDEAVGPAGPTTATRMDKFTDMMLEQTGLIAMI 422 Query: 416 GKSERGPAAIEAIKKHKSAYLMAVGGSAYLVSKAIKSAKVLGFADLGMEAIYEFDVKDMP 475 GK+ERGP AIE+IK HKSAYLMAVGG+AYLVSKAIK+AKV+GFADLGMEAIYEFDV DMP Sbjct: 423 GKAERGPVAIESIKNHKSAYLMAVGGAAYLVSKAIKNAKVVGFADLGMEAIYEFDVVDMP 482 Query: 476 VTVAVDANGVSVHNTGPAEWKEKIA 500 VTVAVDA G S H TGPAEW++KIA Sbjct: 483 VTVAVDAGGTSAHITGPAEWQKKIA 507 >ref|YP_985367.1| fumarase [Acidovorax sp. JS42] gb|ABM41291.1| fumarase [Acidovorax sp. JS42] Length = 546 Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/505 (83%), Positives = 466/505 (92%), Gaps = 6/505 (1%) Query: 2 TIIKQDDLIESVAAALQYISYYHPADYIQHLARAYETEQSPAAKDAIAQILTNSRMCAEG 61 T I+ +DL+ESVAAALQYISYYHPADYIQHLARAYE EQSPAAKDA+AQILTNS+M A G Sbjct: 30 TTIRYNDLVESVAAALQYISYYHPADYIQHLARAYEREQSPAAKDAMAQILTNSKMSATG 89 Query: 62 KRPICQDTGIVNVFLKIGMGVRFEGFSG--SIADAVNEGVRRGYSHPDNVLRASIVADPQ 119 RPICQDTGIVNVFLK+GMGVRFEGF+ S+ DA+NEGVRRGY+HPDN LRAS+VADPQ Sbjct: 90 HRPICQDTGIVNVFLKVGMGVRFEGFAADQSLEDAINEGVRRGYNHPDNTLRASVVADPQ 149 Query: 120 FERKNTKDNTPAVIHMELVPGNTVDVQIAAKGGGSENKTKFVMLNPSDNLVDWVLKTVPT 179 F RKNTKDNTPAVI++++VPG+T+DV +AAKGGGSENK+K VM+NPSDNLVDWVLKTVPT Sbjct: 150 FARKNTKDNTPAVINVQIVPGDTLDVTVAAKGGGSENKSKMVMMNPSDNLVDWVLKTVPT 209 Query: 180 MGAGWCPPGMLGIGIGGTAEKAMLMAKEVLMEDIDMYELL---KRGPQ-NKTEELRIELY 235 MGAGWCPPGMLGIGIGGTAEKA+L+AKE LMED+DMYELL +RG + ++ EELR+ELY Sbjct: 210 MGAGWCPPGMLGIGIGGTAEKAVLLAKESLMEDLDMYELLAKSQRGEKLDQVEELRLELY 269 Query: 236 EKVNALGIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRHGHFVLDGSGPAYM 295 EKVNALGIGAQGLGGL TVLDVKI M+PTHAASKPVAMIPNCAATRH HFV+DGSGP YM Sbjct: 270 EKVNALGIGAQGLGGLATVLDVKIKMYPTHAASKPVAMIPNCAATRHAHFVMDGSGPVYM 329 Query: 296 EPPSLSDWPEVHWVADTEKSKRVNLDTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQ 355 +PPSL WP+V W +TE SKRV+L+TLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQ Sbjct: 330 DPPSLDLWPKVDWAPNTETSKRVDLNTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQ 389 Query: 356 DMLAKGEKLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTDMMLEQTGLISMI 415 DMLAKGEKLPVDFTNRVIYYVGPVDPV+DE VGPAGPTTATRMDKFTDMMLEQTGLI+MI Sbjct: 390 DMLAKGEKLPVDFTNRVIYYVGPVDPVKDEAVGPAGPTTATRMDKFTDMMLEQTGLIAMI 449 Query: 416 GKSERGPAAIEAIKKHKSAYLMAVGGSAYLVSKAIKSAKVLGFADLGMEAIYEFDVKDMP 475 GK+ERGP AIE+IK HKSAYLMAVGG+AYLVSKAIK+AKV+GFADLGMEAIYEFDV DMP Sbjct: 450 GKAERGPVAIESIKNHKSAYLMAVGGAAYLVSKAIKNAKVVGFADLGMEAIYEFDVVDMP 509 Query: 476 VTVAVDANGVSVHNTGPAEWKEKIA 500 VTVAVDA G S H TGPAEW++KIA Sbjct: 510 VTVAVDAGGTSAHITGPAEWQKKIA 534 >ref|ZP_08401505.1| tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha [Rubrivivax benzoatilyticus JA2] gb|EGJ09838.1| tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha [Rubrivivax benzoatilyticus JA2] Length = 508 Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/512 (81%), Positives = 462/512 (90%), Gaps = 6/512 (1%) Query: 2 TIIKQDDLIESVAAALQYISYYHPADYIQHLARAYETEQSPAAKDAIAQILTNSRMCAEG 61 T I+Q DLIESVAAALQYISYYHPAD+I HLARAYE EQSPAAKDAIAQILTNSRMCAEG Sbjct: 3 TTIRQADLIESVAAALQYISYYHPADFIAHLARAYEREQSPAAKDAIAQILTNSRMCAEG 62 Query: 62 KRPICQDTGIVNVFLKIGMGVRFEGFSGSIADAVNEGVRRGYSHPDNVLRASIVADPQFE 121 KRPICQDTGIVNVFLKIGM V++EGF+GSI DAV+EGVRRGY+HPDN LRAS++ADP FE Sbjct: 63 KRPICQDTGIVNVFLKIGMDVKWEGFTGSIQDAVDEGVRRGYNHPDNKLRASVLADPIFE 122 Query: 122 RKNTKDNTPAVIHMELVPGNTVDVQIAAKGGGSENKTKFVMLNPSDNLVDWVLKTVPTMG 181 RKNT+DNTPAV+ ME+VPG+ VDV +AAKGGGSENK+K MLNPSD++VDWVLKTVPTMG Sbjct: 123 RKNTRDNTPAVVFMEVVPGDKVDVTVAAKGGGSENKSKVYMLNPSDSIVDWVLKTVPTMG 182 Query: 182 AGWCPPGMLGIGIGGTAEKAMLMAKEVLMEDIDMYELLKRGPQNKTEELRIELYEKVNAL 241 AGWCPPGMLGIG+GGTAEKA L+AKE LM+DIDM+ELL+RGP NK EELRIELYEKVNAL Sbjct: 183 AGWCPPGMLGIGVGGTAEKAALLAKESLMDDIDMHELLQRGPANKLEELRIELYEKVNAL 242 Query: 242 GIGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRHGHFVLDGSGPAYMEPPSLS 301 GIGAQGLGGLTTVLDVKI PTHAASKP+AMIPNCAATRH HFVLDGSGPA++EPPSL Sbjct: 243 GIGAQGLGGLTTVLDVKIKTWPTHAASKPIAMIPNCAATRHAHFVLDGSGPAFLEPPSLD 302 Query: 302 DWPEVHWVADTEKSKRVNLDTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQDMLAKG 361 WP+VHW D KS+RV+L+TLT +VASWKPGQTLLL+GKMLTGRDAAHKRIQDML +G Sbjct: 303 LWPDVHWAPDYNKSERVDLNTLTPAQVASWKPGQTLLLSGKMLTGRDAAHKRIQDMLERG 362 Query: 362 EKLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTDMMLEQTGLISMIGKSERG 421 E LPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFT MMLE+TGLI+M+GK+ERG Sbjct: 363 EPLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTRMMLEKTGLIAMVGKAERG 422 Query: 422 PAAIEAIKKHKSAYLMAVGGSAYLVSKAIKSAKVLGFADLGMEAIYEFDVKDMPVTVAVD 481 P AI+AIK ++SAYLMAVGG+AYLVSKAIK+AKV+GFADLGMEAIYEFDV DMPVTVAVD Sbjct: 423 PVAIQAIKDNQSAYLMAVGGAAYLVSKAIKAAKVVGFADLGMEAIYEFDVVDMPVTVAVD 482 Query: 482 ANGVSVHNTGPAEWKEKIAQSVSLSKIPVTTA 513 A G S H TGP EW+ KI KIPV A Sbjct: 483 AGGTSAHQTGPQEWQAKIG------KIPVVVA 508 >gb|EFV82941.1| fumarate hydratase class I anaerobic [Achromobacter xylosoxidans C54] Length = 507 Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/511 (81%), Positives = 461/511 (90%), Gaps = 7/511 (1%) Query: 3 IIKQDDLIESVAAALQYISYYHPADYIQHLARAYETEQSPAAKDAIAQILTNSRMCAEGK 62 +IK++D I+S+A +Q+ISYYHP DYI+HLARAYE E+SPAA+DA+AQILTNSRMCAEGK Sbjct: 4 LIKEEDFIQSIADGIQFISYYHPVDYIRHLARAYEREESPAARDAMAQILTNSRMCAEGK 63 Query: 63 RPICQDTGIVNVFLKIGMGVRFEGFSGSIADAVNEGVRRGYSHPDNVLRASIVADPQFER 122 RP+CQDTGIVNVFLK+GMGVRF+ ++ + +EGVRRGY +PDN LRAS++ DP F R Sbjct: 64 RPLCQDTGIVNVFLKVGMGVRFD-TKRTLQELCDEGVRRGYLNPDNPLRASVLDDPLFAR 122 Query: 123 KNTKDNTPAVIHMELVPGNTVDVQIAAKGGGSENKTKFVMLNPSDNLVDWVLKTVPTMGA 182 KNT+DNTP ++H+ELVPG+ VDVQ+A+KGGGSENK+KF MLNPSD+LVDWVLKTVPTMGA Sbjct: 123 KNTRDNTPCILHVELVPGDKVDVQLASKGGGSENKSKFAMLNPSDSLVDWVLKTVPTMGA 182 Query: 183 GWCPPGMLGIGIGGTAEKAMLMAKEVLMEDIDMYELLKRGPQNKTEELRIELYEKVNALG 242 GWCPPGMLGIG+GGTAEKAMLMAK+ LMEDIDMYELL RGPQNK EELRIELYEKVNALG Sbjct: 183 GWCPPGMLGIGVGGTAEKAMLMAKQSLMEDIDMYELLARGPQNKLEELRIELYEKVNALG 242 Query: 243 IGAQGLGGLTTVLDVKIMMHPTHAASKPVAMIPNCAATRHGHFVLDGSGPAYMEPPSLSD 302 IGAQGLGGLTTVLDVKI PTHAASKPVAMIPNCAATRH HF LDGSGPA ++PPSLS+ Sbjct: 243 IGAQGLGGLTTVLDVKINTFPTHAASKPVAMIPNCAATRHAHFELDGSGPARLDPPSLSE 302 Query: 303 WPEVHWVADTEKSKRVNLDTLTKEEVASWKPGQTLLLNGKMLTGRDAAHKRIQDMLAKGE 362 WPEVHW D KSK+V+L+TLTKEEVASWKPGQTLLL+GKMLTGRDAAHKRIQDMLAKGE Sbjct: 303 WPEVHWAPDYNKSKQVDLNTLTKEEVASWKPGQTLLLSGKMLTGRDAAHKRIQDMLAKGE 362 Query: 363 KLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTDMMLEQTGLISMIGKSERGP 422 LPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTDMMLEQTGLI+MIGKSERGP Sbjct: 363 PLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMDKFTDMMLEQTGLIAMIGKSERGP 422 Query: 423 AAIEAIKKHKSAYLMAVGGSAYLVSKAIKSAKVLGFADLGMEAIYEFDVKDMPVTVAVDA 482 AIE+IKKH SAYLMAVGG+AYLVSKAI+ AKVLGFADLGMEAIYEFDVKDMPVTVAVDA Sbjct: 423 VAIESIKKHGSAYLMAVGGAAYLVSKAIRGAKVLGFADLGMEAIYEFDVKDMPVTVAVDA 482 Query: 483 NGVSVHNTGPAEWKEKIAQSVSLSKIPVTTA 513 G SVH TGP EW+ +I KIPV TA Sbjct: 483 QGTSVHTTGPKEWQARIG------KIPVATA 507