BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0081.p (112 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774962.1| transcription regulator protein [Herbaspiril... 219 8e-56 ref|XP_002339010.1| predicted protein [Populus trichocarpa] >gi|... 178 2e-43 ref|YP_004488972.1| HxlR family transcriptional regulator [Delft... 178 3e-43 ref|YP_001564123.1| HxlR family transcriptional regulator [Delft... 177 5e-43 ref|YP_777060.1| HxlR family transcriptional regulator [Burkhold... 176 8e-43 ref|ZP_03544317.1| transcriptional regulator, HxlR family [Comam... 169 2e-40 ref|YP_728614.1| ArsR family transcriptional regulator [Ralstoni... 167 7e-40 ref|YP_004474842.1| HxlR family transcriptional regulator [Pseud... 157 4e-37 ref|ZP_06640226.1| MarR family transcriptional regulator [Serrat... 154 3e-36 ref|YP_624622.1| HxlR family transcriptional regulator [Burkhold... 154 4e-36 >ref|YP_003774962.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ63054.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 112 Score = 219 bits (559), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 110/112 (98%), Positives = 110/112 (98%) Query: 1 MKENMSGCSVEESMRLLGGRWRLLLVSYLLEGPKRFNDLRRDVPGISQRMLTLDLRALEN 60 MKENMSGCSVEESMRLLGGRWRLLLVSYLLEGPKRFNDLRRDVPGISQRMLTLDLRALEN Sbjct: 1 MKENMSGCSVEESMRLLGGRWRLLLVSYLLEGPKRFNDLRRDVPGISQRMLTLDLRALEN 60 Query: 61 AGLVKRTVYPTSPVRVEYEVTEDGKRLEPVVKVMKEFGLWLKERDAVRVGND 112 AGLVKRTVYPTSPVRVEYEVTEDGKRLEPVVKVMKEFGLWLKERD VRV ND Sbjct: 61 AGLVKRTVYPTSPVRVEYEVTEDGKRLEPVVKVMKEFGLWLKERDPVRVAND 112 >ref|XP_002339010.1| predicted protein [Populus trichocarpa] gb|EEF11333.1| predicted protein [Populus trichocarpa] Length = 107 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 82/102 (80%), Positives = 98/102 (96%) Query: 1 MKENMSGCSVEESMRLLGGRWRLLLVSYLLEGPKRFNDLRRDVPGISQRMLTLDLRALEN 60 MK N+SGCSVEE+MRLLGGRWRLL+ SYL++GP+RFNDLRRD+PGISQR LTLDLRALE Sbjct: 1 MKSNISGCSVEEAMRLLGGRWRLLIASYLIDGPRRFNDLRRDMPGISQRSLTLDLRALEE 60 Query: 61 AGLVKRTVYPTSPVRVEYEVTEDGKRLEPVVKVMKEFGLWLK 102 AGLVKRTVYPT+P++VEYE+T+DG+RL+PVV+VMKEFGLW+K Sbjct: 61 AGLVKRTVYPTAPIKVEYELTQDGERLKPVVEVMKEFGLWVK 102 >ref|YP_004488972.1| HxlR family transcriptional regulator [Delftia sp. Cs1-4] gb|AEF90617.1| transcriptional regulator, HxlR family [Delftia sp. Cs1-4] Length = 107 Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 82/102 (80%), Positives = 97/102 (95%) Query: 1 MKENMSGCSVEESMRLLGGRWRLLLVSYLLEGPKRFNDLRRDVPGISQRMLTLDLRALEN 60 MK N+SGCSVEE+MRLLGGRWRLL+ SYL++GP+RFNDLRRD+PGISQR LTLDLRALE Sbjct: 1 MKSNISGCSVEEAMRLLGGRWRLLIASYLIDGPRRFNDLRRDMPGISQRSLTLDLRALEE 60 Query: 61 AGLVKRTVYPTSPVRVEYEVTEDGKRLEPVVKVMKEFGLWLK 102 AGLVKRTVYPT+P++VEYE+T+DG+RL+PVV VMKEFGLW+K Sbjct: 61 AGLVKRTVYPTAPIKVEYELTQDGERLKPVVGVMKEFGLWVK 102 >ref|YP_001564123.1| HxlR family transcriptional regulator [Delftia acidovorans SPH-1] gb|ABX35738.1| transcriptional regulator, HxlR family [Delftia acidovorans SPH-1] Length = 107 Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 82/102 (80%), Positives = 97/102 (95%) Query: 1 MKENMSGCSVEESMRLLGGRWRLLLVSYLLEGPKRFNDLRRDVPGISQRMLTLDLRALEN 60 MK N+SGCSVEE+MRLLGGRWRLL+ SYL++GP+RFNDLRRD+PGISQR LTLDLRALE Sbjct: 1 MKSNISGCSVEEAMRLLGGRWRLLIASYLIDGPRRFNDLRRDMPGISQRSLTLDLRALEE 60 Query: 61 AGLVKRTVYPTSPVRVEYEVTEDGKRLEPVVKVMKEFGLWLK 102 AGLVKRTVYPT+P++VEYE+T DG+RL+PVV+VMKEFGLW+K Sbjct: 61 AGLVKRTVYPTAPIKVEYELTPDGERLKPVVEVMKEFGLWVK 102 >ref|YP_777060.1| HxlR family transcriptional regulator [Burkholderia ambifaria AMMD] gb|ABI90726.1| transcriptional regulator, HxlR family [Burkholderia ambifaria AMMD] Length = 118 Score = 176 bits (447), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 82/106 (77%), Positives = 97/106 (91%) Query: 1 MKENMSGCSVEESMRLLGGRWRLLLVSYLLEGPKRFNDLRRDVPGISQRMLTLDLRALEN 60 MK + +GCSVEE+MR+LGGRWRLL+VSYLL+GP+RF+DLRRD+PGISQRMLTLDLRALE+ Sbjct: 1 MKTSATGCSVEEAMRMLGGRWRLLIVSYLLDGPRRFSDLRRDMPGISQRMLTLDLRALED 60 Query: 61 AGLVKRTVYPTSPVRVEYEVTEDGKRLEPVVKVMKEFGLWLKERDA 106 AG V+RTVYP PVRVEY++T DG RL PVV+VM+EFGLWLK RDA Sbjct: 61 AGFVRRTVYPEVPVRVEYDLTADGDRLRPVVEVMREFGLWLKARDA 106 >ref|ZP_03544317.1| transcriptional regulator, HxlR family [Comamonas testosteroni KF-1] gb|EED68603.1| transcriptional regulator, HxlR family [Comamonas testosteroni KF-1] Length = 105 Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 78/105 (74%), Positives = 96/105 (91%) Query: 1 MKENMSGCSVEESMRLLGGRWRLLLVSYLLEGPKRFNDLRRDVPGISQRMLTLDLRALEN 60 MK N+SGCSVEE+MRLLGGRWRLL+VSYL++GPKR N+L RD+ GISQR LTLDLRALE Sbjct: 1 MKVNVSGCSVEEAMRLLGGRWRLLIVSYLVDGPKRLNELHRDITGISQRSLTLDLRALEK 60 Query: 61 AGLVKRTVYPTSPVRVEYEVTEDGKRLEPVVKVMKEFGLWLKERD 105 +GLVKRTV+P++PVRV+YE+T DGKRL+PV+ VMKEFG+WLK++ Sbjct: 61 SGLVKRTVWPSAPVRVDYELTLDGKRLKPVINVMKEFGMWLKQKS 105 >ref|YP_728614.1| ArsR family transcriptional regulator [Ralstonia eutropha H16] emb|CAJ95249.1| transcriptional regulator, ArsR-family [Ralstonia eutropha H16] Length = 127 Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 78/104 (75%), Positives = 92/104 (88%) Query: 1 MKENMSGCSVEESMRLLGGRWRLLLVSYLLEGPKRFNDLRRDVPGISQRMLTLDLRALEN 60 MK +SGCSVEE+MRLLGGRWRLL+ SYLLEGPKRFN+LRR++P ISQRMLTLDL+AL+ Sbjct: 1 MKTAVSGCSVEEAMRLLGGRWRLLIASYLLEGPKRFNELRREMPDISQRMLTLDLKALQE 60 Query: 61 AGLVKRTVYPTSPVRVEYEVTEDGKRLEPVVKVMKEFGLWLKER 104 GLVKRT +PT PV V+YE+TEDG RL PVV+VM+EFGLW+K R Sbjct: 61 VGLVKRTAFPTVPVTVQYELTEDGARLAPVVEVMREFGLWVKSR 104 >ref|YP_004474842.1| HxlR family transcriptional regulator [Pseudomonas fulva 12-X] gb|AEF22748.1| transcriptional regulator, HxlR family [Pseudomonas fulva 12-X] Length = 120 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 75/104 (72%), Positives = 92/104 (88%) Query: 1 MKENMSGCSVEESMRLLGGRWRLLLVSYLLEGPKRFNDLRRDVPGISQRMLTLDLRALEN 60 MK+N+SGCS+EE+MRL+GGRWRLLLVSYLL+G KRFN LRRD+P ISQR+LTL+LRALE Sbjct: 1 MKKNISGCSIEEAMRLIGGRWRLLLVSYLLDGSKRFNQLRRDMPQISQRVLTLELRALEQ 60 Query: 61 AGLVKRTVYPTSPVRVEYEVTEDGKRLEPVVKVMKEFGLWLKER 104 AGL++RTVYP P RVEY ++ +G+RL PVV+V+K FGLWLK R Sbjct: 61 AGLIQRTVYPEIPPRVEYCLSVEGERLRPVVEVVKTFGLWLKAR 104 >ref|ZP_06640226.1| MarR family transcriptional regulator [Serratia odorifera DSM 4582] gb|EFE94691.1| MarR family transcriptional regulator [Serratia odorifera DSM 4582] Length = 114 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 73/106 (68%), Positives = 89/106 (83%) Query: 1 MKENMSGCSVEESMRLLGGRWRLLLVSYLLEGPKRFNDLRRDVPGISQRMLTLDLRALEN 60 MK+ +SGCS+EE+M L+GGRWRLL+VSYL E PKRF++LRRD+P ISQRMLT+DLRALE+ Sbjct: 1 MKQVISGCSIEEAMNLIGGRWRLLIVSYLFERPKRFSELRRDIPSISQRMLTMDLRALES 60 Query: 61 AGLVKRTVYPTSPVRVEYEVTEDGKRLEPVVKVMKEFGLWLKERDA 106 AG+V RTVYP PVRV Y +T +G+RLE VV +KE GLWLK R A Sbjct: 61 AGIVLRTVYPEVPVRVVYSLTLEGRRLEKVVDAVKELGLWLKARPA 106 >ref|YP_624622.1| HxlR family transcriptional regulator [Burkholderia cenocepacia AU 1054] ref|YP_837029.1| HxlR family transcriptional regulator [Burkholderia cenocepacia HI2424] ref|YP_001777760.1| HxlR family transcriptional regulator [Burkholderia cenocepacia MC0-3] gb|ABF79649.1| transcriptional regulator, HxlR family [Burkholderia cenocepacia AU 1054] gb|ABK10136.1| transcriptional regulator, HxlR family [Burkholderia cenocepacia HI2424] gb|ACA93270.1| transcriptional regulator, HxlR family [Burkholderia cenocepacia MC0-3] Length = 126 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 85/106 (80%), Positives = 97/106 (91%) Query: 1 MKENMSGCSVEESMRLLGGRWRLLLVSYLLEGPKRFNDLRRDVPGISQRMLTLDLRALEN 60 MK + +GCSVEE+MRLLGGRWRLLLVSYLL+GP+RF+DLRRD+PGISQRMLTLDLRALE+ Sbjct: 1 MKTSATGCSVEEAMRLLGGRWRLLLVSYLLDGPRRFSDLRRDMPGISQRMLTLDLRALED 60 Query: 61 AGLVKRTVYPTSPVRVEYEVTEDGKRLEPVVKVMKEFGLWLKERDA 106 AGLV+RTVYP PVRVEY++T DG RL PVV VM+EFGLWLK RDA Sbjct: 61 AGLVRRTVYPEVPVRVEYDLTADGDRLRPVVDVMREFGLWLKARDA 106