BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0071.p         (519 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774952.1| dipeptide ABC transporter periplasmic protei...   987   0.0  
ref|YP_002943976.1| family 5 extracellular solute-binding protei...   494   e-137
ref|YP_004156404.1| family 5 extracellular solute-binding protei...   477   e-132
ref|ZP_08521185.1| extracellular solute-binding protein family 5...   466   e-129
ref|YP_001907330.1| Extracellular solute-binding protein, family...   465   e-129
ref|YP_002648485.1| Extracellular solute-binding protein, family...   465   e-128
gb|ADP12914.1| Extracellular solute-binding protein, family 5 [E...   464   e-128
ref|YP_546494.1| extracellular solute-binding protein [Methyloba...   461   e-127
ref|YP_003531530.1| ABC transporter substrate-binding protein [E...   457   e-126
emb|CBX81046.1| putative ABC transport system, periplasmic compo...   456   e-126

>ref|YP_003774952.1| dipeptide ABC transporter periplasmic protein [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ63044.1| ABC-type dipeptide transport system, periplasmic component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 542

 Score =  987 bits (2552), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/527 (97%), Positives = 516/527 (97%), Gaps = 8/527 (1%)

Query: 1   LLFTPLAATLIASPWHAALAHGDEAGHAHGDIAHAGKDMLTVVGPWELTGLDPTRSGYMF 60
           LLFTPLAATL ASPWHAALAHGDEAGHAHGDIAHAGKDMLTVVGPWELTGLDPTRSGYMF
Sbjct: 16  LLFTPLAATLSASPWHAALAHGDEAGHAHGDIAHAGKDMLTVVGPWELTGLDPTRSGYMF 75

Query: 61  ARMEVLETLLEVDDAGQLQPSLASAWSVSADGLQWRFVLRSGLRYHDGSALTPASILACL 120
           ARMEVLETLLEVDDAGQLQPS+ASAWSVSADGLQWRFVLRSGLRYHDGSALTPASILACL
Sbjct: 76  ARMEVLETLLEVDDAGQLQPSVASAWSVSADGLQWRFVLRSGLRYHDGSALTPASILACL 135

Query: 121 QRAQARPGVLRLADIAALRVEGQTLVVVLRRPFGPLPYLLTHYTTQILAPASFDAQGNVV 180
           QRAQARPGVLRLADIAALRVEGQTLVVVLRRPFGPLPYLLTHYTTQILAPASFDAQGNVV
Sbjct: 136 QRAQARPGVLRLADIAALRVEGQTLVVVLRRPFGPLPYLLTHYTTQILAPASFDAQGNVV 195

Query: 181 AINGSGPFRIRSIALPQQFEVERVAGS--------DVGKVVQRARYISVSRAETRTLLVQ 232
           AI GSGPFRIRSIALPQQFEVERVAGS        DVGKVVQRARYISVSRAETRTLLVQ
Sbjct: 196 AIIGSGPFRIRSIALPQQFEVERVAGSVSGSGAGSDVGKVVQRARYISVSRAETRTLLVQ 255

Query: 233 SGQADLAFSLDPPSIRALQDSPRASLLSAMLPRTTLLKLNAGHPLLADVRVRRAISLCIE 292
           SGQADLAFSLDPPSIRALQDSPRASLLSAMLPRTTLLKLNAGHPLLADVRVRRAISLCIE
Sbjct: 256 SGQADLAFSLDPPSIRALQDSPRASLLSAMLPRTTLLKLNAGHPLLADVRVRRAISLCIE 315

Query: 293 REGIARALLRDPDLGATQLFPPSLARWHDAALAPLRTNLQQACSLLDQAGWRPGSDGVRR 352
           REGIARALLRDPDLGATQLFPPSLARWHDAALAPLRTNLQQA SLLDQAGWRPGSDGVRR
Sbjct: 316 REGIARALLRDPDLGATQLFPPSLARWHDAALAPLRTNLQQARSLLDQAGWRPGSDGVRR 375

Query: 353 RDGQRMALNLTTFVDRPELPLIATALQEEMRQIGMAVRVVIGNSSDIPAGHRSGQLQMAL 412
           RDGQRMALNLTTFVDRPELPLIATALQEEMRQIGMAVRVVIGNSSDIPAGHRSGQLQMAL
Sbjct: 376 RDGQRMALNLTTFVDRPELPLIATALQEEMRQIGMAVRVVIGNSSDIPAGHRSGQLQMAL 435

Query: 413 AARNYGNLPDPVASLLQDFGPQGGDWGAMGWDNQEVPALLARLAATPADAAAKGNAERAR 472
           AARNYGNLPDPVASLLQDFGPQGGDWGAMGWDNQEVPALLARLAATPADAAAKGNAERAR
Sbjct: 436 AARNYGNLPDPVASLLQDFGPQGGDWGAMGWDNQEVPALLARLAATPADAAAKGNAERAR 495

Query: 473 IVALLQEQLPVIPVVWYRQTCAVSRRVRGASIDPFERSYRISSLQWT 519
           IVALLQEQLPVIPVVWYRQTCAVSRRVRGASIDPFERSYRISSLQWT
Sbjct: 496 IVALLQEQLPVIPVVWYRQTCAVSRRVRGASIDPFERSYRISSLQWT 542


>ref|YP_002943976.1| family 5 extracellular solute-binding protein [Variovorax paradoxus
           S110]
 gb|ACS18710.1| extracellular solute-binding protein family 5 [Variovorax paradoxus
           S110]
          Length = 518

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 258/502 (51%), Positives = 340/502 (67%), Gaps = 3/502 (0%)

Query: 20  AHGDEAGHAHGDIAHAGKDMLTVVGPWELTGLDPTRSGYMFARMEVLETLLEVDDAGQLQ 79
           A G     + G +A      L +VGPWEL GL P  SGY+F RM++ ETL+E  + G   
Sbjct: 17  AVGPAVAASAGLLAQPALSPLQIVGPWELGGLAPANSGYIFTRMQIAETLMEAREDGTPL 76

Query: 80  PSLASAWSVSADGLQWRFVLRSGLRYHDGSALTPASILACLQRAQARPGVLRLADIAALR 139
           P LA  W VSADGL WRF LR+  R+HDG+ +T A+++ CLQ A+  P +L LA I +L 
Sbjct: 77  PGLAERWGVSADGLAWRFTLRATARFHDGTPVTAAAVVRCLQAARVAPALLSLAPIKSLD 136

Query: 140 VEGQTLVVV-LRRPFGPLPYLLTHYTTQILAPASFDAQGNVVAINGSGPFRIRSIALPQQ 198
            EG  +V++ L  P+G LP LL H +T +LAPAS+   G V  I GSGP+R+ S+A PQ 
Sbjct: 137 AEGAGVVLIRLASPYGGLPALLAHSSTMVLAPASYGPDGRVRTIVGSGPYRVVSLAPPQH 196

Query: 199 FEVERVAGSDVGK-VVQRARYISVSRAETRTLLVQSGQADLAFSLDPPSIRALQDSPRAS 257
            E     G D  +  V+R RY++  RAETR L+ + GQADLA+ LDP S+  L+   +  
Sbjct: 197 VEAAAFDGYDGARPAVERVRYLAAGRAETRALMAEGGQADLAYGLDPASLVRLRKRGQVR 256

Query: 258 LLSAMLPRTTLLKLNAGHPLLADVRVRRAISLCIEREGIARALLRDPDLGATQLFPPSLA 317
           + +  LPRT +LK+NAG P L D+RVR+A+SLCI+R GIA+ALLRDP+L ATQLFPP+L 
Sbjct: 257 VDTVTLPRTVILKVNAGLPALKDLRVRQALSLCIDRAGIAKALLRDPELAATQLFPPTLK 316

Query: 318 RWHDAALAPLRTNLQQACSLLDQAGWRPGSDGVRRRDGQRMALNLTTFVDRPELPLIATA 377
            WHD ALAPL  +   A  LL +AGWR  +DG+R   GQ + L+L TF DRPELP+IA+A
Sbjct: 317 AWHDPALAPLTHDPAAAARLLAEAGWRRAADGLRDASGQPLRLSLRTFPDRPELPVIASA 376

Query: 378 LQEEMRQIGMAVRVVIGNSSDIPAGHRSGQLQMALAARNYGNLPDPVASLLQDFGPQGGD 437
           LQE+ RQ G+AV+V +GNS DIP GHR G LQ+ LAARNY  +PDP  +L+QDFG  GGD
Sbjct: 377 LQEQWRQAGIAVQVGVGNSGDIPLGHRDGSLQLGLAARNYATVPDPTGTLMQDFGASGGD 436

Query: 438 WGAMGWDNQEVPALLARLAATPADAAAKGNAERARIVALLQEQLPVIPVVWYRQTCAVSR 497
           WGAMGW +  +   L+ L+  P+ A       RA++ A+LQ +LPVIP+ WYRQ  AVS+
Sbjct: 437 WGAMGWTSDALVKALSELSLGPSSAERTARL-RAQVAAVLQAELPVIPIAWYRQQVAVSQ 495

Query: 498 RVRGASIDPFERSYRISSLQWT 519
           RV G S+DP ERSYR+++++W 
Sbjct: 496 RVAGVSLDPLERSYRLTAMRWN 517


>ref|YP_004156404.1| family 5 extracellular solute-binding protein [Variovorax paradoxus
           EPS]
 gb|ADU38293.1| extracellular solute-binding protein family 5 [Variovorax paradoxus
           EPS]
          Length = 520

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 247/481 (51%), Positives = 330/481 (68%), Gaps = 3/481 (0%)

Query: 40  LTVVGPWELTGLDPTRSGYMFARMEVLETLLEVDDAGQLQPSLASAWSVSADGLQWRFVL 99
           L +VGPWE+ GL P  SG++F RM++ ETL+   D G   P LA  W VS DGL W F L
Sbjct: 39  LQIVGPWEIAGLSPASSGHVFTRMQITETLMNASDDGLPLPGLAERWRVSGDGLAWHFTL 98

Query: 100 RSGLRYHDGSALTPASILACLQRAQARPGVLRLADIAALRVEGQTLVVV-LRRPFGPLPY 158
           R+  R+HDG+A+T A+++ CLQ A+  P +L  A I ++  EG  +VV+ L +P+G LP 
Sbjct: 99  RAAARFHDGAAVTAAAVVRCLQAARVAPALLSQAPIRSVETEGVGMVVIRLTQPYGALPA 158

Query: 159 LLTHYTTQILAPASFDAQGNVVAINGSGPFRIRSIALPQQFEVERVAGSDVGK-VVQRAR 217
           LL H +T +LAPAS+ A G V +I GSGP+R+ S+A PQ  E     G D  +  ++R R
Sbjct: 159 LLAHSSTMLLAPASYAADGAVRSIVGSGPYRVVSMAPPQHVEAAVFDGYDGPRPAIERVR 218

Query: 218 YISVSRAETRTLLVQSGQADLAFSLDPPSIRALQDSPRASLLSAMLPRTTLLKLNAGHPL 277
           Y++  R+ETR L+ + GQADLA+ LDP S+  L+   +  + +  LPRT +LK+NAG P 
Sbjct: 219 YLAAGRSETRALMAEGGQADLAYGLDPASLVRLRKRGQVRVDTVTLPRTVILKVNAGLPA 278

Query: 278 LADVRVRRAISLCIEREGIARALLRDPDLGATQLFPPSLARWHDAALAPLRTNLQQACSL 337
           L DVRVR+A+SL I+R GIA+ALLRDP+L ATQLFPP++A WH+ AL  L+ +   A  L
Sbjct: 279 LNDVRVRQALSLAIDRAGIAKALLRDPELAATQLFPPTMAAWHNNALPALKQDPDAAARL 338

Query: 338 LDQAGWRPGSDGVRRRDGQRMALNLTTFVDRPELPLIATALQEEMRQIGMAVRVVIGNSS 397
           L +AGWR   DG+R   GQ + L+L TF DRPELPLIA+ALQE+ RQ G+AV+V IGNS 
Sbjct: 339 LAEAGWRRAPDGLRDASGQPLRLSLRTFPDRPELPLIASALQEQWRQAGIAVQVSIGNSG 398

Query: 398 DIPAGHRSGQLQMALAARNYGNLPDPVASLLQDFGPQGGDWGAMGWDNQEVPALLARLAA 457
           DIP GHR G LQ+ LAARNY  +PDP  +L+QDFG  GGDWGAMGW +  V   LA L+ 
Sbjct: 399 DIPLGHRDGSLQLGLAARNYATVPDPTGTLMQDFGTSGGDWGAMGWRSDAVARALAELSR 458

Query: 458 TPADAAAKGNAERARIVALLQEQLPVIPVVWYRQTCAVSRRVRGASIDPFERSYRISSLQ 517
               +A +  A R ++ A+L  +LPVIP+ WYRQ  AV RR+ G S+DP ERSYR+++++
Sbjct: 459 G-TSSAERAAALRTQVTAVLHAELPVIPITWYRQQVAVGRRLEGVSLDPLERSYRLTAMR 517

Query: 518 W 518
           W
Sbjct: 518 W 518


>ref|ZP_08521185.1| extracellular solute-binding protein family 5 [Aeromonas caviae
           Ae398]
          Length = 508

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 242/491 (49%), Positives = 320/491 (65%), Gaps = 3/491 (0%)

Query: 30  GDIAHAGKDMLTVVGPWELTGLDPTRSGYMFARMEVLETLLEVDDAGQLQPSLASAWSVS 89
           G  A  GK  L +VGPWE+  +DP  +G  F RM+V+ETL++VD  G LQP LAS WS S
Sbjct: 18  GTTAADGKP-LAMVGPWEIHSVDPASNGVFFTRMQVVETLVDVDRKGNLQPGLASEWSRS 76

Query: 90  ADGLQWRFVLRSGLRYHDGSALTPASILACLQRAQARPGVLRLADIAALRVEGQTLVVVL 149
            DGLQWRF LR G R+HDGS ++       LQ+A  +PGV+  A IA++      L V L
Sbjct: 77  DDGLQWRFTLRPGARFHDGSEVSAEHAAFALQQAWRKPGVMTSAPIASIGSGDGVLKVTL 136

Query: 150 RRPFGPLPYLLTHYTTQILAPASFDAQGNVVAINGSGPFRIRSIALPQQFEVERVAGSDV 209
             PF  LP +L H +TQILA A++DA+G V  + GSGP+RI  +  PQ+ E  R  G   
Sbjct: 137 SEPFASLPAVLAHPSTQILAKAAYDAKGEVTQVIGSGPYRITRLQQPQRIETVRFDGWQG 196

Query: 210 GK-VVQRARYISVSRAETRTLLVQSGQADLAFSLDPPSIRALQDSPRASLLSAMLPRTTL 268
            +  ++   Y++V RAE+RTL+ +SGQAD+A+ LDP SIR LQ + R S+ S  LPRT  
Sbjct: 197 ARPAIEEVSYLTVGRAESRTLMAESGQADIAWGLDPVSIRRLQQASRVSIASVTLPRTIQ 256

Query: 269 LKLNAGHPLLADVRVRRAISLCIEREGIARALLRDPDLGATQLFPPSLARWHDAALAPLR 328
           LKLN   P L+D  VRRA+SL I+R G+A ALLRDP++ ATQLFPP+L  WH   L PL 
Sbjct: 257 LKLNGADPRLSDPVVRRALSLAIDRRGMAAALLRDPEMAATQLFPPTLGEWHQLGLTPLA 316

Query: 329 TNLQQACSLLDQAGWRPGSDGVRRRDGQRMALNLTTFVDRPELPLIATALQEEMRQIGMA 388
            +++ A +    AGW+PG DGV R+  +R AL L TF DRPELPL+ATALQ + + +G+ 
Sbjct: 317 YDVKAARAAFAAAGWQPGEDGVLRKGEERFALTLRTFPDRPELPLLATALQAQWKAVGVD 376

Query: 389 VRVVIGNSSDIPAGHRSGQLQMALAARNYGNLPDPVASLLQDFGPQGGDWGAMGWDNQEV 448
           ++V +GNSS+IPAGH+ G LQ+ L ARNY  +PDP+ +LL D  P G DWG M W +  +
Sbjct: 377 LKVAVGNSSEIPAGHQDGSLQLGLYARNYALVPDPLVTLLGDLAPAGADWGVMNWHSPAM 436

Query: 449 PALLARLAATPADAAAKGNAERARIVALLQEQLPVIPVVWYRQTCAVSRRVRGASIDPFE 508
              L RL AT A +     A R  I   LQ++LP++P+ WYRQ+ AVSR + G  +DP E
Sbjct: 437 TQTLTRL-ATQALSPTNAAAARREIATTLQQELPLLPIAWYRQSAAVSRGLEGFELDPQE 495

Query: 509 RSYRISSLQWT 519
           RSY +  L W+
Sbjct: 496 RSYGLDKLTWS 506


>ref|YP_001907330.1| Extracellular solute-binding protein, family 5 [Erwinia
           tasmaniensis Et1/99]
 emb|CAO96437.1| Extracellular solute-binding protein, family 5 [Erwinia
           tasmaniensis Et1/99]
          Length = 525

 Score =  465 bits (1197), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/495 (48%), Positives = 335/495 (67%), Gaps = 12/495 (2%)

Query: 29  HGDIAHAGKDMLTVVGPWELTGLDPTRSGYMFARMEVLETLLEVDDAGQLQPSLASAWSV 88
           +G  + A + +  +V P+E+ G DPT SG +F +M ++ETL+  D AGQ  P LAS+WSV
Sbjct: 36  NGPASAAPERIAALVAPFEIKGSDPTLSGDIFLKMSIVETLVNADSAGQPLPGLASSWSV 95

Query: 89  SADGLQWRFVLRSGLRYHDGSALTPASILACLQRAQARPGVLRLADIAALRVEGQTLVVV 148
           SADGL WRF LRSG+ YHDGS LT  S++  L  A+++PG+L  A IAA+R E Q +++ 
Sbjct: 96  SADGLLWRFNLRSGVMYHDGSPLTAQSVVNALDVARSKPGLLDKAPIAAIRAENQQVLIE 155

Query: 149 LRRPFGPLPYLLTHYTTQILAPASFDAQGNVVAINGSGPFRIRSIALPQQFEVERVA--- 205
           L++PF PL  +L     QILAPAS+D    VV + G+GP+R+ S   PQ+  V R     
Sbjct: 156 LKQPFTPLLSMLAENRAQILAPASYDDAHKVVQVIGTGPYRLTSFQPPQKLTVARFHDYW 215

Query: 206 GSDVGKVVQRARYISVSRAETRTLLVQSGQADLAFSLDPPSIRALQDSPRASLLSAMLPR 265
           GS     +++A Y++V RAETR LL +SG ADL  +LDP S   L+ + +  LL+  +PR
Sbjct: 216 GS--APSIEQASYMAVGRAETRALLAESGDADLVLNLDPASRSRLKKNAKVQLLAIAIPR 273

Query: 266 TTLLKLNAGHPLLADVRVRRAISLCIEREGIARALLRDPDLGATQLFPPSLARWHDAALA 325
           T LLK+NAG+PLL DVR R+A+S+ ++REGIARA+LR     A +LFPPS+A+WH+ +L 
Sbjct: 274 TVLLKVNAGYPLLNDVRARQALSMALDREGIARAILRY-QAAADRLFPPSVAQWHNPSLT 332

Query: 326 PLRTNLQQACSLLDQAGWRPGSDGVRRRDGQRMALNLTTFVDRPELPLIATALQEEMRQI 385
           PL  N+ QA +LL + GW+PG+DG  +R+GQ  +L LTT+ DRPELPLIA A+Q+++R I
Sbjct: 333 PLGHNVPQAQALLAELGWKPGADGTLQRNGQPFSLTLTTYPDRPELPLIAAAIQQQLRDI 392

Query: 386 GMAVRVVIGNSSDIPAGHRSGQLQMALAARNYGNLPDPVASLLQDFGPQGGDWGAMGWDN 445
           G+ V +   NS +I A H  G L++AL ARN+   PDP+ +LLQD+ PQGGDWGAM W +
Sbjct: 393 GVKVAINSTNSGEIAAKHHDGSLELALVARNFALTPDPLGTLLQDYAPQGGDWGAMNWSD 452

Query: 446 QEVPALLARL--AATPADAAAKGNAERARIVALLQEQLPVIPVVWYRQTCAVSRRVRGAS 503
                 LA L   + PAD    G  +R ++  +LQ +LP IPV WY+Q+ AVS R+ GA 
Sbjct: 453 ATFNQTLAGLVTGSDPAD----GQKQREQLTRILQSELPTIPVAWYQQSAAVSHRLSGAV 508

Query: 504 IDPFERSYRISSLQW 518
           +DPFERS+ +  ++W
Sbjct: 509 LDPFERSFGLEKMRW 523


>ref|YP_002648485.1| Extracellular solute-binding protein, family 5 [Erwinia pyrifoliae
           Ep1/96]
 emb|CAX55251.1| Extracellular solute-binding protein, family 5 [Erwinia pyrifoliae
           Ep1/96]
 emb|CAY73963.1| putative ABC transport system, periplasmic component [Erwinia
           pyrifoliae DSM 12163]
          Length = 507

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 232/478 (48%), Positives = 326/478 (68%), Gaps = 4/478 (0%)

Query: 42  VVGPWELTGLDPTRSGYMFARMEVLETLLEVDDAGQLQPSLASAWSVSADGLQWRFVLRS 101
           +V P+E+ G DPT SG +F +M ++ETL+  D  GQ  P LAS+WSV+ +GL WRF LRS
Sbjct: 31  LVAPFEIKGSDPTLSGDIFLKMSIVETLVNADSHGQPLPGLASSWSVTENGLVWRFTLRS 90

Query: 102 GLRYHDGSALTPASILACLQRAQARPGVLRLADIAALRVEGQTLVVVLRRPFGPLPYLLT 161
           G+++HDGS LT  +++  L  A+++PG+L  A IA +R EGQ +++ L +PF PL  +L 
Sbjct: 91  GVKFHDGSTLTAQNVVNALNVARSKPGLLDKAPIADIRAEGQQVLIALTQPFTPLLSMLA 150

Query: 162 HYTTQILAPASFDAQGNVVAINGSGPFRIRSIALPQQFEVERVAGS-DVGKVVQRARYIS 220
               QILA AS++    VV + G+GP+R+ S+  PQ+  V R          +++A Y++
Sbjct: 151 ENRAQILAAASYNDAHKVVQVIGTGPYRLTSLQPPQKLTVARFHDYWGAAPSIEQASYMA 210

Query: 221 VSRAETRTLLVQSGQADLAFSLDPPSIRALQDSPRASLLSAMLPRTTLLKLNAGHPLLAD 280
           V RAETR LL +SG ADL  +LDP S   L  + +  LLS  +PR+ LLK+NAGHPLLAD
Sbjct: 211 VGRAETRALLAESGNADLVLNLDPASRSRLNKNAKVQLLSMAIPRSVLLKVNAGHPLLAD 270

Query: 281 VRVRRAISLCIEREGIARALLRDPDLGATQLFPPSLARWHDAALAPLRTNLQQACSLLDQ 340
           VR R+A+S+ ++R+GIARA+LR P   A QLFPPS+A+WH+A+LAPL  NL QA +LL +
Sbjct: 271 VRARQALSMALDRDGIARAILRYPA-AADQLFPPSVAQWHNASLAPLSHNLPQARALLAE 329

Query: 341 AGWRPGSDGVRRRDGQRMALNLTTFVDRPELPLIATALQEEMRQIGMAVRVVIGNSSDIP 400
            GW+PG++G  +R+GQ  +L LTT+ DRPELPLIA A+Q+++R IG+ V +   NS +I 
Sbjct: 330 LGWKPGAEGTLQRNGQLFSLTLTTYPDRPELPLIAAAIQQQLRDIGVQVAINTTNSGEIA 389

Query: 401 AGHRSGQLQMALAARNYGNLPDPVASLLQDFGPQGGDWGAMGWDNQEVPALLARLAATPA 460
           A H  G L++AL ARN+   P+P+ +LLQD+ P+GGDWGAM W N      LARL     
Sbjct: 390 AMHHDGTLELALVARNFALTPEPLGTLLQDYAPRGGDWGAMNWSNATFDQTLARLET--G 447

Query: 461 DAAAKGNAERARIVALLQEQLPVIPVVWYRQTCAVSRRVRGASIDPFERSYRISSLQW 518
             AA    +R  +  +LQ +LP IPVVWY+Q+ AVS R+ GA +DPFERS+ +  ++W
Sbjct: 448 SNAADSQQQRELLTRILQSELPTIPVVWYQQSAAVSPRLSGAVLDPFERSFGLEKMRW 505


>gb|ADP12914.1| Extracellular solute-binding protein, family 5 [Erwinia sp. Ejp617]
          Length = 507

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/478 (48%), Positives = 327/478 (68%), Gaps = 4/478 (0%)

Query: 42  VVGPWELTGLDPTRSGYMFARMEVLETLLEVDDAGQLQPSLASAWSVSADGLQWRFVLRS 101
           +V P+E+ G DPT SG +F +M ++ETL+  D  GQ  P LAS+WSV+ +GL WRF LRS
Sbjct: 31  LVAPFEIKGSDPTLSGDIFLKMSIVETLVNADSHGQPLPGLASSWSVAENGLVWRFTLRS 90

Query: 102 GLRYHDGSALTPASILACLQRAQARPGVLRLADIAALRVEGQTLVVVLRRPFGPLPYLLT 161
           G+++HDGS LT  +++  L  A+++PG+L  A IA +R EGQ +++ L +PF PL  +L 
Sbjct: 91  GVKFHDGSTLTAQNVVNALNVARSKPGLLDKAPIADIRAEGQQVLIALTQPFTPLLSMLA 150

Query: 162 HYTTQILAPASFDAQGNVVAINGSGPFRIRSIALPQQFEVERVAGS-DVGKVVQRARYIS 220
               QILA AS++    VV + G+GP+R+ S+  PQ+  V R          +++A Y++
Sbjct: 151 ENRAQILAAASYNDAHKVVQVIGTGPYRLTSLQPPQKLTVARFHDYWGAAPSIEQASYMA 210

Query: 221 VSRAETRTLLVQSGQADLAFSLDPPSIRALQDSPRASLLSAMLPRTTLLKLNAGHPLLAD 280
           V RAETR LL +SG ADL  +LDP S   L  + +  LL+  +PR+ LLK+NAGHPLLAD
Sbjct: 211 VGRAETRALLAESGNADLVLNLDPASRSRLNKNAKVQLLAMAIPRSVLLKVNAGHPLLAD 270

Query: 281 VRVRRAISLCIEREGIARALLRDPDLGATQLFPPSLARWHDAALAPLRTNLQQACSLLDQ 340
           VR R+A+S+ ++R+GIARA+LR P   A QLFPPS+A+WH+A+LAPL  NL QA +LL +
Sbjct: 271 VRARQALSMALDRDGIARAILRYPA-AADQLFPPSVAQWHNASLAPLSHNLPQARALLAE 329

Query: 341 AGWRPGSDGVRRRDGQRMALNLTTFVDRPELPLIATALQEEMRQIGMAVRVVIGNSSDIP 400
            GW+PG++G  +R+GQ  +L LTT+ DRPELPLIA A+Q+++R IG+ V +   NS +I 
Sbjct: 330 LGWKPGAEGTLQRNGQLFSLTLTTYPDRPELPLIAAAIQQQLRDIGVQVAINTTNSGEIA 389

Query: 401 AGHRSGQLQMALAARNYGNLPDPVASLLQDFGPQGGDWGAMGWDNQEVPALLARLAATPA 460
           A H  G L++AL ARN+   P+P+ +LLQD+ P+GGDWGAM W N      LARL     
Sbjct: 390 AMHHDGTLELALVARNFALTPEPLGTLLQDYAPRGGDWGAMNWSNATFDQTLARLET--G 447

Query: 461 DAAAKGNAERARIVALLQEQLPVIPVVWYRQTCAVSRRVRGASIDPFERSYRISSLQW 518
             AA    +R  +  +LQ +LP IPVVWY+Q+ AVS R+ GA++DPFERS+ +  ++W
Sbjct: 448 SNAADSQQQRELLTRILQSELPTIPVVWYQQSAAVSPRLSGAALDPFERSFGLEKMRW 505


>ref|YP_546494.1| extracellular solute-binding protein [Methylobacillus flagellatus
           KT]
 gb|ABE50653.1| extracellular solute-binding protein, family 5 [Methylobacillus
           flagellatus KT]
          Length = 522

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 236/490 (48%), Positives = 329/490 (67%), Gaps = 10/490 (2%)

Query: 36  GKDMLTVVGPWELTGLDPTRSGYMFARMEVLETLLEVDDAGQLQPSLASAWSVSADGLQW 95
            K  L++VGPWE++ L+P+R+GYMF RM+V E L+  D  G+  P LA  W +S DGLQW
Sbjct: 35  AKTSLSIVGPWEISTLEPSRAGYMFLRMQVAEALVSTDLEGKAAPGLAERWEISTDGLQW 94

Query: 96  RFVLRSGLRYHDGSALTPASILACLQRAQARPGVLRLADIAALR--VEGQTLVVVLRRPF 153
           RF LR   R+HDGS +T  S++  LQRA ++PGVL +A IA +   V G+ + + L +P+
Sbjct: 95  RFFLRPDARFHDGSPVTTESVVMNLQRALSQPGVLAMAPIADISAAVPGE-IKITLSKPY 153

Query: 154 GPLPYLLTHYTTQILAPASFDAQGNVVAINGSGPFRIRSIALPQQFEVERVAGSDVGK-- 211
             LP LL H +  ILAPA+++ +G V  + GSGP+++    LPQQFE+  ++    G+  
Sbjct: 154 AMLPMLLAHSSAIILAPAAYNEKGQVRRMLGSGPYQLVRQTLPQQFELA-LSPHWQGRPP 212

Query: 212 VVQRARYISVSRAETRTLLVQSGQADLAFSLDPPSIRALQDSPRASLLSAMLPRTTLLKL 271
            ++   Y+SVSR ETR L+ +S QADL F  DP S + L+ +PR  L    L RT +LKL
Sbjct: 213 AIRHIHYLSVSRPETRALMAESHQADLVFGFDPASTQRLRRNPRVVLQEVDLARTVMLKL 272

Query: 272 NAGHPLLADVRVRRAISLCIEREGIARALLRDPDLGATQLFPPSLARWH--DAALAPLRT 329
           N+GH  L  V  R+A+SL I+R GIA+ +LR P+L A QL PPS+  WH  D     LRT
Sbjct: 273 NSGHRFLNTVETRQALSLAIDRAGIAKGILRTPELAADQLLPPSITHWHQADPEFPRLRT 332

Query: 330 NLQQACSLLDQAGWRPGSDGVRRRDGQRMALNLTTFVDRPELPLIATALQEEMRQIGMAV 389
           +L QA +LL   GW+PG+DG+ RR+G+R +L LTTF DRPELP+IATALQ++ R++G+ +
Sbjct: 333 DLAQAKALLSAQGWQPGADGILRRNGERFSLQLTTFPDRPELPIIATALQDQFRKLGIEL 392

Query: 390 RVVIGNSSDIPAGHRSGQLQMALAARNYGNLPDPVASLLQDFGPQGGDWGAMGWDNQEVP 449
           +V++ NSS+IP GHR+G+L+M L  RN+  +PDP  +L QDF   GGDWGAM W N  VP
Sbjct: 393 KVIVTNSSEIPLGHRTGKLEMGLVPRNFALVPDPFVTLNQDFKHGGGDWGAMNWQNGTVP 452

Query: 450 ALLARLAATPADAAAKGNAERARIVALLQEQLPVIPVVWYRQTCAVSRRVRGASIDPFER 509
           ALL ++ AT  + A++ +  R  I+  LQ+ LPVIPV WYR   AV  ++RG  +DP E+
Sbjct: 453 ALLEKI-ATETEPASQAHY-RHDIMLTLQQGLPVIPVTWYRLPVAVHPQLRGVKVDPLEQ 510

Query: 510 SYRISSLQWT 519
           SY IS + W+
Sbjct: 511 SYYISDMAWS 520


>ref|YP_003531530.1| ABC transporter substrate-binding protein [Erwinia amylovora
           CFBP1430]
 ref|YP_003539177.1| ABC transporter substrate-binding protein [Erwinia amylovora ATCC
           49946]
 emb|CBJ46775.1| ABC transporter, substrate-binding protein [Erwinia amylovora ATCC
           49946]
 emb|CBA21197.1| putative ABC transport system, periplasmic component [Erwinia
           amylovora CFBP1430]
          Length = 507

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/478 (48%), Positives = 321/478 (67%), Gaps = 4/478 (0%)

Query: 42  VVGPWELTGLDPTRSGYMFARMEVLETLLEVDDAGQLQPSLASAWSVSADGLQWRFVLRS 101
           +V P+E+ G DPT SG +F +M ++ETL+  D  GQ  P LAS+WSV+  GL WRFVLRS
Sbjct: 31  LVAPFEIKGSDPTLSGDIFLKMSIVETLVNADSHGQPLPGLASSWSVTNKGLLWRFVLRS 90

Query: 102 GLRYHDGSALTPASILACLQRAQARPGVLRLADIAALRVEGQTLVVVLRRPFGPLPYLLT 161
           G+++HDGSALT  S++  L  A+++PG+L  A I  +R EGQ +++ L +PF PL  +L 
Sbjct: 91  GVKFHDGSALTAKSVVNALNVARSKPGLLDKAPITDIRAEGQQVLIALSQPFTPLLSMLA 150

Query: 162 HYTTQILAPASFDAQGNVVAINGSGPFRIRSIALPQQFEVERVAGS-DVGKVVQRARYIS 220
               QILA AS++    VV + G+GP+R+ S+  PQ+  V R          +++A Y++
Sbjct: 151 ENRAQILAAASYNDAHKVVQVIGTGPYRLTSLQPPQKLTVARFHDYWGAAPSIEQASYMA 210

Query: 221 VSRAETRTLLVQSGQADLAFSLDPPSIRALQDSPRASLLSAMLPRTTLLKLNAGHPLLAD 280
           V RAETR LL +SG ADL  +LD  S   L  +    LL+  +PR+ LLK+NAGHPLLAD
Sbjct: 211 VGRAETRALLAESGNADLVLNLDAASRSRLNKNASVRLLAMSVPRSVLLKVNAGHPLLAD 270

Query: 281 VRVRRAISLCIEREGIARALLRDPDLGATQLFPPSLARWHDAALAPLRTNLQQACSLLDQ 340
           VRVR+A+S+ ++REGIARA+LR P   A QLFPPS+ +WH+A+L PL  NL QA +LL +
Sbjct: 271 VRVRQALSMALDREGIARAILRYPA-AADQLFPPSVVQWHNASLVPLSHNLPQARALLAE 329

Query: 341 AGWRPGSDGVRRRDGQRMALNLTTFVDRPELPLIATALQEEMRQIGMAVRVVIGNSSDIP 400
            GW+PG+ G  +R G+  +L LTT+ DRPELPLIA A+Q+++R IG+ V +   NS +I 
Sbjct: 330 LGWKPGAGGTLQRHGRLFSLTLTTYPDRPELPLIAAAIQQQLRDIGVQVTINTTNSGEIA 389

Query: 401 AGHRSGQLQMALAARNYGNLPDPVASLLQDFGPQGGDWGAMGWDNQEVPALLARLAATPA 460
           A H  G L++AL ARN+   P+P+ +LLQD+ PQGGDWGAM W N      LARL     
Sbjct: 390 ARHHDGTLELALVARNFALTPEPLGTLLQDYAPQGGDWGAMNWSNATFNQSLARLETD-- 447

Query: 461 DAAAKGNAERARIVALLQEQLPVIPVVWYRQTCAVSRRVRGASIDPFERSYRISSLQW 518
             AA    +R ++  +LQ +LP IPV WY+Q+ AVS R+ GA +DPFERS+ +  ++W
Sbjct: 448 SNAADSQQQREQLTRILQSELPTIPVTWYQQSAAVSGRLSGAVLDPFERSFGLEKMRW 505


>emb|CBX81046.1| putative ABC transport system, periplasmic component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 507

 Score =  456 bits (1172), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 230/478 (48%), Positives = 320/478 (66%), Gaps = 4/478 (0%)

Query: 42  VVGPWELTGLDPTRSGYMFARMEVLETLLEVDDAGQLQPSLASAWSVSADGLQWRFVLRS 101
           +V P+E+ G DPT SG +F +M ++ETL+  D  GQ  P LAS+WSV+  GL WRFVLRS
Sbjct: 31  LVAPFEIKGSDPTLSGDIFLKMSIVETLVNADSHGQPLPGLASSWSVTNKGLLWRFVLRS 90

Query: 102 GLRYHDGSALTPASILACLQRAQARPGVLRLADIAALRVEGQTLVVVLRRPFGPLPYLLT 161
           G+++HDGS LT  S++  L  A+++PG+L  A I  +R EGQ +++ L +PF PL  +L 
Sbjct: 91  GVKFHDGSVLTAKSVVNALNVARSKPGLLDKAPITDIRAEGQQVLIALSQPFTPLLSMLA 150

Query: 162 HYTTQILAPASFDAQGNVVAINGSGPFRIRSIALPQQFEVERVAGS-DVGKVVQRARYIS 220
               QILA AS++    VV + G+GP+R+ S+  PQ+  V R          +++A Y++
Sbjct: 151 ENRAQILAAASYNDAHKVVQVIGTGPYRLTSLQPPQKLTVARFHDYWGAAPSIEQASYMA 210

Query: 221 VSRAETRTLLVQSGQADLAFSLDPPSIRALQDSPRASLLSAMLPRTTLLKLNAGHPLLAD 280
           V RAETR LL +SG ADL  +LD  S   L  +    LL+  +PR+ LLK+NAGHPLLAD
Sbjct: 211 VGRAETRALLAESGNADLVLNLDAASRSRLNKNASVRLLAMSVPRSVLLKVNAGHPLLAD 270

Query: 281 VRVRRAISLCIEREGIARALLRDPDLGATQLFPPSLARWHDAALAPLRTNLQQACSLLDQ 340
           VRVR+A+S+ ++REGIARA+LR P   A QLFPPS+ +WH+A+L PL  NL QA +LL +
Sbjct: 271 VRVRQALSMALDREGIARAILRYPA-AADQLFPPSVVQWHNASLVPLSHNLPQARALLAE 329

Query: 341 AGWRPGSDGVRRRDGQRMALNLTTFVDRPELPLIATALQEEMRQIGMAVRVVIGNSSDIP 400
            GW+PG+ G  +R G+  +L LTT+ DRPELPLIA A+Q+++R IG+ V +   NS +I 
Sbjct: 330 LGWKPGAGGTLQRHGRLFSLTLTTYPDRPELPLIAAAIQQQLRDIGVQVTINTTNSGEIA 389

Query: 401 AGHRSGQLQMALAARNYGNLPDPVASLLQDFGPQGGDWGAMGWDNQEVPALLARLAATPA 460
           A H  G L++AL ARN+   P+P+ +LLQD+ PQGGDWGAM W N      LARL     
Sbjct: 390 ARHHDGTLELALVARNFALTPEPLGTLLQDYAPQGGDWGAMNWSNATFNQSLARLETD-- 447

Query: 461 DAAAKGNAERARIVALLQEQLPVIPVVWYRQTCAVSRRVRGASIDPFERSYRISSLQW 518
             AA    +R ++  +LQ +LP IPV WY+Q+ AVS R+ GA +DPFERS+ +  ++W
Sbjct: 448 SNAADSQQQREQLTRILQSELPTIPVTWYQQSAAVSGRLSGAVLDPFERSFGLEKMRW 505