BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0063.p (1192 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774945.1| cation/multidrug efflux pump protein [Herbas... 2070 0.0 ref|YP_004751838.1| transmembrane drug efflux pump [Collimonas f... 1651 0.0 emb|CCA81820.1| multidrug efflux system, subunit C [blood diseas... 1415 0.0 ref|YP_003750182.1| multidrug efflux system, subunit c [Ralstoni... 1414 0.0 ref|NP_522760.1| drug efflux transmembrane protein [Ralstonia so... 1411 0.0 emb|CBJ40877.1| multidrug efflux system, subunit C [Ralstonia so... 1408 0.0 ref|YP_003748494.1| multidrug efflux system, subunit C [Ralstoni... 1403 0.0 gb|AEG71458.1| multidrug efflux system, subunit c [Ralstonia sol... 1400 0.0 ref|ZP_00942673.1| Transmembrane drug efflux pump [Ralstonia sol... 1398 0.0 emb|CCA86798.1| multidrug efflux system, subunit C [Ralstonia sy... 1396 0.0 >ref|YP_003774945.1| cation/multidrug efflux pump protein [Herbaspirillum seropedicae SmR1] gb|ADJ63037.1| cation/multidrug efflux pump protein [Herbaspirillum seropedicae SmR1] Length = 1078 Score = 2070 bits (5362), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1033/1074 (96%), Positives = 1054/1074 (98%), Gaps = 8/1074 (0%) Query: 1 MNISLPFIQRPIATTLLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMA 60 MNISLPFIQRPIATTLLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMA Sbjct: 1 MNISLPFIQRPIATTLLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMA 60 Query: 61 ATVATPLERAMGAIAGVTEMTSTSSQNSTRITLQFDLSRDIDGAARDVQAALNAARNLLP 120 ATVATPLERAMGAIAGVTEMTSTSSQNSTRITLQFDLSRDIDGAARDVQAALNAARNLLP Sbjct: 61 ATVATPLERAMGAIAGVTEMTSTSSQNSTRITLQFDLSRDIDGAARDVQAALNAARNLLP 120 Query: 121 TGMPSNPTYRKVNPADAPILILAMTSDTMTQGQMYDAADSIVAQKLSQVRGVGQVSVGGS 180 TGMPSNPTYRKVNPADAPILILAMTSDTMTQGQMYDAADSIVAQKLSQVRGVGQVSVGGS Sbjct: 121 TGMPSNPTYRKVNPADAPILILAMTSDTMTQGQMYDAADSIVAQKLSQVRGVGQVSVGGS 180 Query: 181 SQPAVRIELNPTALNKYGIGTADVRTAVAATNANRPKGLLEDQDRNWQIYANDQAKTAAE 240 SQPAVRIELNPTALNKYGIGTADVRTAVAATNANRPKGLLEDQDRNWQIYANDQAKTAAE Sbjct: 181 SQPAVRIELNPTALNKYGIGTADVRTAVAATNANRPKGLLEDQDRNWQIYANDQAKTAAE 240 Query: 241 YAPLIVSYRNGTPVRVQDVAEVRDSVADVRNAGSSNGKPSVLIIINRQPGANIIDTVDNV 300 YAPLIVSYRNGTPVRVQDVAEVRDSVADVRNAGSSNGKPSVLIIINRQPGANIIDTVDNV Sbjct: 241 YAPLIVSYRNGTPVRVQDVAEVRDSVADVRNAGSSNGKPSVLIIINRQPGANIIDTVDNV 300 Query: 301 RELLPQLQASIPSAIDMKVVLDRTPTIRASLKETEFTLILSVALVIMVVFLFLRNARATL 360 RELLPQLQASIPSAIDMKVVLDRTPTIRASLKETEFTLILSVALVIMVVFLFLRNARATL Sbjct: 301 RELLPQLQASIPSAIDMKVVLDRTPTIRASLKETEFTLILSVALVIMVVFLFLRNARATL 360 Query: 361 IPAVAVPVSLIGTFGVMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRHIESGMKP 420 IPAVAVPVSLIGTFGVMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRHIESGMKP Sbjct: 361 IPAVAVPVSLIGTFGVMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRHIESGMKP 420 Query: 421 YKAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAILVSLVVSLT 480 YKAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAILVSLVVSLT Sbjct: 421 YKAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAILVSLVVSLT 480 Query: 481 TTPMMCAQLLRHDPAADAARRQRRHPWLQKIADQSAAIFEDMLLAYQRTLAWALRAAPLM 540 TTPMMCAQLLRHDPAAD ARRQRRHPWLQKIADQSAAIFEDMLLAYQRTLAWALRAAPLM Sbjct: 481 TTPMMCAQLLRHDPAADEARRQRRHPWLQKIADQSAAIFEDMLLAYQRTLAWALRAAPLM 540 Query: 541 MLILLATIALNVYLYKAIPKGFFPQQDTGRLVGGIRGDQAISFQAMRTKLNEFIDIVRAD 600 MLILLATIALNVYLYKAIPKGFFPQQDTGRLVGGIRGDQAISFQAMRTKLNEFIDIVRAD Sbjct: 541 MLILLATIALNVYLYKAIPKGFFPQQDTGRLVGGIRGDQAISFQAMRTKLNEFIDIVRAD 600 Query: 601 PAVSDVVAFTGGQRRNGGFMYVTLKPLSERKDSADKVVARLRIKTAKVAGARVFLVPVQD 660 PAVSDVVAFTGGQRRNGGFMYVTLKPLSERKDSADKVVARLRIKTAKVAGARVFLVPVQD Sbjct: 601 PAVSDVVAFTGGQRRNGGFMYVTLKPLSERKDSADKVVARLRIKTAKVAGARVFLVPVQD 660 Query: 661 IRIGARQSDSQYEYSLKSDDVGLLRIWEPKIRLALSNLKELEDISTDQQDNGLQTTLTID 720 IRIGARQSDSQYEYSLKSDDVGLLRIWEPKIRLALSNLKELEDISTDQQDNGLQTTLTID Sbjct: 661 IRIGARQSDSQYEYSLKSDDVGLLRIWEPKIRLALSNLKELEDISTDQQDNGLQTTLTID 720 Query: 721 RESAMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQYHVVMEAAPQYWQSPETLRDTYVS 780 RE+AMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQYHVVMEAAPQYWQSPETLRDTYVS Sbjct: 721 RETAMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQYHVVMEAAPQYWQSPETLRDTYVS 780 Query: 781 LAGSSNLSPTTSSLSTPPALSASGKLNANTGLAQTISTAPSRQIPLAAFSRFEPTTTSLS 840 LAGSSNLSPTTSSLSTPPALSASGKLNANTGLAQTISTAPSRQIPLAAFSRFEPTTTSLS Sbjct: 781 LAGSSNLSPTTSSLSTPPALSASGKLNANTGLAQTISTAPSRQIPLAAFSRFEPTTTSLS 840 Query: 841 VSHEGQFVASTLSFNLAEGVSLSQATAAIDRAMAQLGVPTNVLGTFAGTANAFQSSTSSQ 900 VSHEGQFVASTLSFNLAEGVSLSQATAAIDRAMAQLGVPTNVLGTFAGTANAFQSSTSSQ Sbjct: 841 VSHEGQFVASTLSFNLAEGVSLSQATAAIDRAMAQLGVPTNVLGTFAGTANAFQSSTSSQ 900 Query: 901 PLLILTALLAVYIVLGILYESLIHPITIISTLPSAGVGALLALMVTGTDFSLIALIGVIL 960 PLLILTALLAVYIVLGILYESLIHPITIISTLPSAGVGALLALMVTGTDFSLIALIGVIL Sbjct: 901 PLLILTALLAVYIVLGILYESLIHPITIISTLPSAGVGALLALMVTGTDFSLIALIGVIL 960 Query: 961 LIGIVKKNAIMMIDFALEAERHEGKSPREAIYQACLLRFRPILMTTMAALLGALPLMLGT 1020 LIGIVKKNAIMM+DFA++AER+ G SPR+AI++AC LRFRPI+MTTMAALLGA+PL +G Sbjct: 961 LIGIVKKNAIMMVDFAIDAERNRGMSPRDAIFEACKLRFRPIMMTTMAALLGAIPLAIGH 1020 Query: 1021 GVGSELRQPLGITMVGGLLVSQVLTLFTTPVIYLGFDSL--------GRRLRAE 1066 G G+ELRQPLGI++VGGL+VSQ+LTL+TTPV+YL + L GR+ + E Sbjct: 1021 GDGAELRQPLGISIVGGLVVSQLLTLYTTPVVYLYMERLSSWSKRRFGRKNKTE 1074 Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 113/113 (100%), Positives = 113/113 (100%) Query: 1080 KKNAIMMVDFAIDAERNRGMSPRDAIFEACKLRFRPIMMTTMAALLGAIPLAIGHGDGAE 1139 KKNAIMMVDFAIDAERNRGMSPRDAIFEACKLRFRPIMMTTMAALLGAIPLAIGHGDGAE Sbjct: 966 KKNAIMMVDFAIDAERNRGMSPRDAIFEACKLRFRPIMMTTMAALLGAIPLAIGHGDGAE 1025 Query: 1140 LRQPLGISIVGGLVVSQLLTLYTTPVVYLYMERLSSWSKRRFGRKNKTETSAA 1192 LRQPLGISIVGGLVVSQLLTLYTTPVVYLYMERLSSWSKRRFGRKNKTETSAA Sbjct: 1026 LRQPLGISIVGGLVVSQLLTLYTTPVVYLYMERLSSWSKRRFGRKNKTETSAA 1078 >ref|YP_004751838.1| transmembrane drug efflux pump [Collimonas fungivorans Ter331] gb|AEK61015.1| Transmembrane drug efflux pump [Collimonas fungivorans Ter331] Length = 1072 Score = 1651 bits (4275), Expect = 0.0, Method: Compositional matrix adjust. Identities = 816/1073 (76%), Positives = 946/1073 (88%), Gaps = 11/1073 (1%) Query: 1 MNISLPFIQRPIATTLLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMA 60 MNIS PFIQRPIATTLLTIGIALAG+VAFRLLPVSPLPQVD+PTISISAS+PGASPETMA Sbjct: 1 MNISRPFIQRPIATTLLTIGIALAGMVAFRLLPVSPLPQVDFPTISISASLPGASPETMA 60 Query: 61 ATVATPLERAMGAIAGVTEMTSTSSQNSTRITLQFDLSRDIDGAARDVQAALNAARNLLP 120 ATVATPLERA+G+IAG+TEMTS+SS +STRITLQFDLSRDIDGAARDVQAALNAARNLLP Sbjct: 61 ATVATPLERALGSIAGITEMTSSSSLSSTRITLQFDLSRDIDGAARDVQAALNAARNLLP 120 Query: 121 TGMPSNPTYRKVNPADAPILILAMTSDTMTQGQMYDAADSIVAQKLSQVRGVGQVSVGGS 180 TG+PSNP+YRKVNPADAP++ILA+TSD+MTQGQMYDAAD+I+AQKLSQV+G+GQVSVGGS Sbjct: 121 TGLPSNPSYRKVNPADAPVMILALTSDSMTQGQMYDAADTILAQKLSQVKGIGQVSVGGS 180 Query: 181 SQPAVRIELNPTALNKYGIGTADVRTAVAATNANRPKGLLEDQDRNWQIYANDQAKTAAE 240 SQPAVR+ELNPTALNKYGIGTADVRTA+AATNANRPKG+LED D+NWQIYANDQAKTAAE Sbjct: 181 SQPAVRVELNPTALNKYGIGTADVRTAIAATNANRPKGMLEDGDKNWQIYANDQAKTAAE 240 Query: 241 YAPLIVSYRNGTPVRVQDVAEVRDSVADVRNAGSSNGKPSVLIIINRQPGANIIDTVDNV 300 Y PLIVSYRNG PVRV DVA V DSV+++RNAGS+NGKPSVL+I+NRQPGANII+TVD V Sbjct: 241 YMPLIVSYRNGAPVRVSDVATVVDSVSNLRNAGSANGKPSVLVILNRQPGANIIETVDEV 300 Query: 301 RELLPQLQASIPSAIDMKVVLDRTPTIRASLKETEFTLILSVALVIMVVFLFLRNARATL 360 R LLPQL+ASIP+AI++ V LDRTPTIRASL ETE TL++S+ALVIMVVFLFLRN RATL Sbjct: 301 RALLPQLRASIPAAINLDVALDRTPTIRASLHETESTLLMSIALVIMVVFLFLRNGRATL 360 Query: 361 IPAVAVPVSLIGTFGVMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRHIESGMKP 420 IPAVAVP+SLIGTFGVMYL G+SLDNLSLMALTIATGFVVDDAIVVLEN+SRHIE GMKP Sbjct: 361 IPAVAVPISLIGTFGVMYLLGYSLDNLSLMALTIATGFVVDDAIVVLENVSRHIEEGMKP 420 Query: 421 YKAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAILVSLVVSLT 480 + AAL G +EVGFTVLSMSISLIAVFIPIL+M GIVGRLFREFA+TLSVAILVSLVVSLT Sbjct: 421 FAAALKGTKEVGFTVLSMSISLIAVFIPILLMGGIVGRLFREFAVTLSVAILVSLVVSLT 480 Query: 481 TTPMMCAQLLRHDPAADAARRQRRHPWLQKIADQSAAIFEDMLLAYQRTLAWALRAAPLM 540 TTPMMCA+LL+HDP R+Q R + + F+ ML Y+R+LAWALR APLM Sbjct: 481 TTPMMCARLLKHDP----ERKQGR------FFNATERAFDAMLRGYERSLAWALRFAPLM 530 Query: 541 MLILLATIALNVYLYKAIPKGFFPQQDTGRLVGGIRGDQAISFQAMRTKLNEFIDIVRAD 600 MLILL TI LNVYLY AIPKG FPQQDTG ++GGI+GDQ+ISFQ+MR KL++F+DIVR D Sbjct: 531 MLILLGTIVLNVYLYTAIPKGLFPQQDTGLVIGGIQGDQSISFQSMRVKLDQFVDIVRKD 590 Query: 601 PAVSDVVAFTGGQRRNGGFMYVTLKPLSERKDSADKVVARLRIKTAKVAGARVFLVPVQD 660 P V V+AFTGG + N G M++TL+PL++RK +AD+V+ARLR K + +AGA +F+ VQD Sbjct: 591 PDVKSVIAFTGGGQSNRGQMFITLQPLTQRKLTADQVIARLRGKLSHIAGANLFMQSVQD 650 Query: 661 IRIGARQSDSQYEYSLKSDDVGLLRIWEPKIRLALSNLKELEDISTDQQDNGLQTTLTID 720 IR+G R SD QY+Y+L+SDD+ LR WEPKIR A S L +L D+STDQQD GLQTTLTID Sbjct: 651 IRVGGRSSDGQYQYTLQSDDLNELRTWEPKIREAFSALPQLADVSTDQQDKGLQTTLTID 710 Query: 721 RESAMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQYHVVMEAAPQYWQSPETLRDTYVS 780 RE+A+R+GVTPQLIDSTL+DLFGQRQ+STIYSGMNQYHVVMEAAPQYWQSP+ L DTYVS Sbjct: 711 RETAIRSGVTPQLIDSTLNDLFGQRQVSTIYSGMNQYHVVMEAAPQYWQSPQVLHDTYVS 770 Query: 781 LAGSS-NLSPTTSSLSTPPALSASGKLNANTGLAQTISTAPSRQIPLAAFSRFEPTTTSL 839 + S+ NLSPTTS+L TPPAL+A GKL +N+ LA T+ST +Q+PLAAFS F+PT TSL Sbjct: 771 IPSSTANLSPTTSALGTPPALTAGGKLASNSSLALTLSTTAEQQMPLAAFSSFQPTNTSL 830 Query: 840 SVSHEGQFVASTLSFNLAEGVSLSQATAAIDRAMAQLGVPTNVLGTFAGTANAFQSSTSS 899 V+H+ QF+AST+SFNL G SLS AT AI+ AMA++GVPT+V G+F G+AN FQSS SS Sbjct: 831 GVNHQSQFIASTISFNLPVGGSLSDATLAINDAMARIGVPTSVHGSFQGSANLFQSSLSS 890 Query: 900 QPLLILTALLAVYIVLGILYESLIHPITIISTLPSAGVGALLALMVTGTDFSLIALIGVI 959 QP+LILTALLAVYIVLG+LYES +HPITI+STLPSAGVGALLAL+ TGT+FSLIALIGVI Sbjct: 891 QPMLILTALLAVYIVLGVLYESYVHPITILSTLPSAGVGALLALLATGTEFSLIALIGVI 950 Query: 960 LLIGIVKKNAIMMIDFALEAERHEGKSPREAIYQACLLRFRPILMTTMAALLGALPLMLG 1019 LLIGIVKKNAIMMIDFAL+ ER G SPR++I++AC LRFRPI+MTTMAA+LGA+PL LG Sbjct: 951 LLIGIVKKNAIMMIDFALDVERTRGLSPRDSIFEACKLRFRPIMMTTMAAMLGAVPLALG 1010 Query: 1020 TGVGSELRQPLGITMVGGLLVSQVLTLFTTPVIYLGFDSLGRRLRAERHHDGG 1072 G G+ELR+PLGI +VGGL++SQ+LTL+TTPV+YL D + + GG Sbjct: 1011 QGDGAELRRPLGIAIVGGLIMSQLLTLYTTPVVYLYMDRFRLWSKDKWERRGG 1063 Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 82/105 (78%), Positives = 97/105 (92%) Query: 1080 KKNAIMMVDFAIDAERNRGMSPRDAIFEACKLRFRPIMMTTMAALLGAIPLAIGHGDGAE 1139 KKNAIMM+DFA+D ER RG+SPRD+IFEACKLRFRPIMMTTMAA+LGA+PLA+G GDGAE Sbjct: 957 KKNAIMMIDFALDVERTRGLSPRDSIFEACKLRFRPIMMTTMAAMLGAVPLALGQGDGAE 1016 Query: 1140 LRQPLGISIVGGLVVSQLLTLYTTPVVYLYMERLSSWSKRRFGRK 1184 LR+PLGI+IVGGL++SQLLTLYTTPVVYLYM+R WSK ++ R+ Sbjct: 1017 LRRPLGIAIVGGLIMSQLLTLYTTPVVYLYMDRFRLWSKDKWERR 1061 >emb|CCA81820.1| multidrug efflux system, subunit C [blood disease bacterium R229] Length = 1033 Score = 1415 bits (3664), Expect = 0.0, Method: Compositional matrix adjust. Identities = 715/1057 (67%), Positives = 860/1057 (81%), Gaps = 47/1057 (4%) Query: 1 MNISLPFIQRPIATTLLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMA 60 MN+S FI RP+AT LLTIG+ALAGI AF LLPVSPLPQVD+PTIS++AS+PGASPETMA Sbjct: 1 MNLSATFIARPVATALLTIGVALAGIAAFNLLPVSPLPQVDFPTISVNASLPGASPETMA 60 Query: 61 ATVATPLERAMGAIAGVTEMTSTSSQNSTRITLQFDLSRDIDGAARDVQAALNAARNLLP 120 ATVATPLER++G IAG+TEMTS S+ STR+TLQFDLSRDIDGAARDVQAA+NA+R+LLP Sbjct: 61 ATVATPLERSLGRIAGITEMTSQSALGSTRVTLQFDLSRDIDGAARDVQAAINASRSLLP 120 Query: 121 TGMPSNPTYRKVNPADAPILILAMTSDTMTQGQMYDAADSIVAQKLSQVRGVGQVSVGGS 180 +G+PSNPTYRKVNPADAPI+IL +TSDT ++G++YDAA +I+AQKLSQ+ GVGQV++GG+ Sbjct: 121 SGLPSNPTYRKVNPADAPIMILGLTSDTKSRGELYDAASTILAQKLSQISGVGQVNIGGA 180 Query: 181 SQPAVRIELNPTALNKYGIGTADVRTAVAATNANRPKGLLEDQDRNWQIYANDQAKTAAE 240 S PAVR+ELNPTALNKY I VRT + ATNAN+PKG+LE DR W IYANDQA+ A E Sbjct: 181 SLPAVRVELNPTALNKYAISAETVRTVITATNANKPKGMLEAGDRVWTIYANDQARHAEE 240 Query: 241 YAPLIVSYRNGTPVRVQDVAEVRDSVADVRNAGSSNGKPSVLIIINRQPGANIIDTVDNV 300 Y PLI++YRNG PVR+ DVAEV DSV D+RN GS+NGKPSVL+IINRQPGANIIDTVD + Sbjct: 241 YKPLIIAYRNGAPVRLSDVAEVTDSVQDIRNYGSANGKPSVLLIINRQPGANIIDTVDRI 300 Query: 301 RELLPQLQASIPSAIDMKVVLDRTPTIRASLKETEFTLILSVALVIMVVFLFLRNARATL 360 +LP L+ +IP+ I++ V++DRTPTIRASL++ E TLILS+ LVIMVV+LFLRN RATL Sbjct: 301 NAILPYLRNTIPAQINLDVMMDRTPTIRASLRDVERTLILSIGLVIMVVYLFLRNLRATL 360 Query: 361 IPAVAVPVSLIGTFGVMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRHIESGMKP 420 IP+VAVPVSLIGTFGVMYL G+SLDNLSLMALT+ATGFVVDDAIVVLEN+SRHIE+GM+P Sbjct: 361 IPSVAVPVSLIGTFGVMYLCGYSLDNLSLMALTVATGFVVDDAIVVLENVSRHIENGMRP 420 Query: 421 YKAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAILVSLVVSLT 480 +AAL GAREVGFTV+SMS SLIAVFIP+LMM GIVGRLFREFA+TLSVAILVSL +SLT Sbjct: 421 MQAALKGAREVGFTVVSMSFSLIAVFIPLLMMGGIVGRLFREFAVTLSVAILVSLAISLT 480 Query: 481 TTPMMCAQLLRHDPAADAARRQRRHPWLQKIADQSAAIFEDMLLAYQRTLAWALRAAPLM 540 TTPMMCA+LL+ PA+ + W + ++ + F +L Y+ +LAWALR + L Sbjct: 481 TTPMMCARLLK--PAS-----EEEPGWFHR---KTESFFTLLLDGYRHSLAWALRHSWLT 530 Query: 541 MLILLATIALNVYLYKAIPKGFFPQQDTGRLVGGIRGDQAISFQAMRTKLNEFIDIVRAD 600 +LILLAT+ LNVYLY +PKGFFPQQD GRL+G I+ DQ+ISFQAMRTKL +FI IV+ D Sbjct: 531 LLILLATVCLNVYLYVVVPKGFFPQQDVGRLMGFIQADQSISFQAMRTKLVDFIHIVQQD 590 Query: 601 PAVSDVVAFTGGQRRNGGFMYVTLKPLSERKDSADKVVARLRIKTAKVAGARVFLVPVQD 660 PAV +VV FTGG + N G M++ LKPLSERK SAD+V+ RLR K A+ GA +FL VQD Sbjct: 591 PAVENVVGFTGGSQINSGQMFIQLKPLSERKLSADQVINRLRGKLAREPGANLFLQAVQD 650 Query: 661 IRIGARQSDSQYEYSLKSDDVGLLRIWEPKIRLALSNLKELEDISTDQQDNGLQTTLTID 720 IRIG R S++QY+Y+L++D++ LR WEPKIR AL +K L D++TD QD GLQT+L D Sbjct: 651 IRIGGRPSNAQYQYTLQADNLEELRAWEPKIRQALMQIKSLLDVNTDAQDKGLQTSLVFD 710 Query: 721 RESAMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQYHVVMEAAPQYWQSPETLRDTYVS 780 R+ AM G+TP+ ID+ L++ FGQRQ+STIY+ +NQY VVMEAAPQYWQ+PE LRD Y+ Sbjct: 711 RDKAMALGITPKDIDNALNNAFGQRQVSTIYNPLNQYRVVMEAAPQYWQNPEGLRDIYL- 769 Query: 781 LAGSSNLSPTTSSLSTPPALSASGKLNANTGLAQTISTAPSRQIPLAAFSRFEPTTTSLS 840 ++ASG Q+PL+ FS +EPT T L+ Sbjct: 770 -------------------ITASGA-----------------QVPLSTFSHYEPTNTPLA 793 Query: 841 VSHEGQFVASTLSFNLAEGVSLSQATAAIDRAMAQLGVPTNVLGTFAGTANAFQSSTSSQ 900 V+H+GQF ASTLSFNLA G SLS AT I AM ++GVPT V G+F GTA AFQ S SSQ Sbjct: 794 VNHQGQFAASTLSFNLAPGASLSTATQQIQDAMNRIGVPTTVHGSFQGTARAFQDSLSSQ 853 Query: 901 PLLILTALLAVYIVLGILYESLIHPITIISTLPSAGVGALLALMVTGTDFSLIALIGVIL 960 P+LIL AL+ +YIVLG+LYES +HPITI+STLPSAGVGALLAL++T TDFS+IALIGVIL Sbjct: 854 PVLILFALITIYIVLGVLYESYVHPITILSTLPSAGVGALLALILTDTDFSIIALIGVIL 913 Query: 961 LIGIVKKNAIMMIDFALEAERHEGKSPREAIYQACLLRFRPILMTTMAALLGALPLMLGT 1020 LIGIVKKNAIMMIDFALEAER G SP +AI+ AC+LRFRPI+MTTMAALLGALPL LG Sbjct: 914 LIGIVKKNAIMMIDFALEAERSRGMSPADAIFHACVLRFRPIMMTTMAALLGALPLALGH 973 Query: 1021 GVGSELRQPLGITMVGGLLVSQVLTLFTTPVIYLGFD 1057 G G+ELRQPLGI++VGGLLVSQ+LTL+TTPV+YL D Sbjct: 974 GDGAELRQPLGISIVGGLLVSQILTLYTTPVVYLALD 1010 Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 78/92 (84%), Positives = 88/92 (95%) Query: 1080 KKNAIMMVDFAIDAERNRGMSPRDAIFEACKLRFRPIMMTTMAALLGAIPLAIGHGDGAE 1139 KKNAIMM+DFA++AER+RGMSP DAIF AC LRFRPIMMTTMAALLGA+PLA+GHGDGAE Sbjct: 919 KKNAIMMIDFALEAERSRGMSPADAIFHACVLRFRPIMMTTMAALLGALPLALGHGDGAE 978 Query: 1140 LRQPLGISIVGGLVVSQLLTLYTTPVVYLYME 1171 LRQPLGISIVGGL+VSQ+LTLYTTPVVYL ++ Sbjct: 979 LRQPLGISIVGGLLVSQILTLYTTPVVYLALD 1010 >ref|YP_003750182.1| multidrug efflux system, subunit c [Ralstonia solanacearum PSI07] emb|CBJ35560.1| multidrug efflux system, subunit C [Ralstonia solanacearum PSI07] Length = 1033 Score = 1414 bits (3660), Expect = 0.0, Method: Compositional matrix adjust. Identities = 714/1057 (67%), Positives = 860/1057 (81%), Gaps = 47/1057 (4%) Query: 1 MNISLPFIQRPIATTLLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMA 60 MN+S FI RP+AT LLTIG+ALAGI AF LLPVSPLPQVD+PTIS++AS+PGASPETMA Sbjct: 1 MNLSATFIARPVATALLTIGVALAGIAAFNLLPVSPLPQVDFPTISVNASLPGASPETMA 60 Query: 61 ATVATPLERAMGAIAGVTEMTSTSSQNSTRITLQFDLSRDIDGAARDVQAALNAARNLLP 120 ATVATPLER++G IAG+TEMTS S+ STR+TLQFDLSRDIDGAARDVQAA+NA+R+LLP Sbjct: 61 ATVATPLERSLGRIAGITEMTSQSALGSTRVTLQFDLSRDIDGAARDVQAAINASRSLLP 120 Query: 121 TGMPSNPTYRKVNPADAPILILAMTSDTMTQGQMYDAADSIVAQKLSQVRGVGQVSVGGS 180 +G+PSNPTYRKVNPADAPI+IL +TSDT ++G++YDAA +I+AQKLSQ+ GVGQV++GG+ Sbjct: 121 SGLPSNPTYRKVNPADAPIMILGLTSDTKSRGELYDAASTILAQKLSQISGVGQVNIGGA 180 Query: 181 SQPAVRIELNPTALNKYGIGTADVRTAVAATNANRPKGLLEDQDRNWQIYANDQAKTAAE 240 S PAVR+ELNPTALNKY I VRT + ATNAN+PKG+LE DR W IYANDQA+ A E Sbjct: 181 SLPAVRVELNPTALNKYAISAETVRTVITATNANKPKGMLEAGDRVWTIYANDQARHAEE 240 Query: 241 YAPLIVSYRNGTPVRVQDVAEVRDSVADVRNAGSSNGKPSVLIIINRQPGANIIDTVDNV 300 Y PLI++YRNG PVR+ DVAEV DSV D+RN GS+NGKPSVL+IINRQPGANIIDTVD + Sbjct: 241 YKPLIIAYRNGAPVRLSDVAEVTDSVQDIRNYGSANGKPSVLLIINRQPGANIIDTVDRI 300 Query: 301 RELLPQLQASIPSAIDMKVVLDRTPTIRASLKETEFTLILSVALVIMVVFLFLRNARATL 360 +LP L+ +IP+ I++ V++DRTPTIRASL++ E TL+LS+ LVIMVV+LFLRN RATL Sbjct: 301 NAILPYLRNTIPAQINLDVMMDRTPTIRASLRDVERTLMLSIGLVIMVVYLFLRNLRATL 360 Query: 361 IPAVAVPVSLIGTFGVMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRHIESGMKP 420 IP+VAVPVSLIGTFGVMYL G+SLDNLSLMALT+ATGFVVDDAIVVLEN+SRHIE+GM+P Sbjct: 361 IPSVAVPVSLIGTFGVMYLCGYSLDNLSLMALTVATGFVVDDAIVVLENVSRHIENGMRP 420 Query: 421 YKAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAILVSLVVSLT 480 +AAL GAREVGFTV+SMS SLIAVFIP+LMM GIVGRLFREFA+TLSVAILVSL +SLT Sbjct: 421 MQAALKGAREVGFTVVSMSFSLIAVFIPLLMMGGIVGRLFREFAVTLSVAILVSLAISLT 480 Query: 481 TTPMMCAQLLRHDPAADAARRQRRHPWLQKIADQSAAIFEDMLLAYQRTLAWALRAAPLM 540 TTPMMCA+LL+ PA+ + W + ++ + F +L Y+ +LAWALR + L Sbjct: 481 TTPMMCARLLK--PAS-----EEEPGWFHR---KTESFFTLLLDGYRHSLAWALRHSWLT 530 Query: 541 MLILLATIALNVYLYKAIPKGFFPQQDTGRLVGGIRGDQAISFQAMRTKLNEFIDIVRAD 600 +LILLAT+ LNVYLY +PKGFFPQQD GRL+G I+ DQ+ISFQAMRTKL +FI IV+ D Sbjct: 531 LLILLATVCLNVYLYVVVPKGFFPQQDVGRLMGFIQADQSISFQAMRTKLVDFIHIVQQD 590 Query: 601 PAVSDVVAFTGGQRRNGGFMYVTLKPLSERKDSADKVVARLRIKTAKVAGARVFLVPVQD 660 PAV +VV FTGG + N G M++ LKPLSERK SAD+V+ RLR K A+ GA +FL VQD Sbjct: 591 PAVENVVGFTGGSQINSGQMFIQLKPLSERKLSADQVINRLRGKLAREPGANLFLQAVQD 650 Query: 661 IRIGARQSDSQYEYSLKSDDVGLLRIWEPKIRLALSNLKELEDISTDQQDNGLQTTLTID 720 IRIG R S++QY+Y+L++D++ LR WEPKIR AL +K L D++TD QD GLQT+L D Sbjct: 651 IRIGGRPSNAQYQYTLQADNLEELRAWEPKIRQALMQIKSLLDVNTDAQDKGLQTSLVFD 710 Query: 721 RESAMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQYHVVMEAAPQYWQSPETLRDTYVS 780 R+ AM G+TP+ ID+ L++ FGQRQ+STIY+ +NQY VVMEAAPQYWQ+PE LRD Y+ Sbjct: 711 RDKAMALGITPKDIDNALNNAFGQRQVSTIYNPLNQYRVVMEAAPQYWQNPEGLRDIYL- 769 Query: 781 LAGSSNLSPTTSSLSTPPALSASGKLNANTGLAQTISTAPSRQIPLAAFSRFEPTTTSLS 840 ++ASG Q+PL+ FS +EPT T L+ Sbjct: 770 -------------------ITASGA-----------------QVPLSTFSHYEPTNTPLA 793 Query: 841 VSHEGQFVASTLSFNLAEGVSLSQATAAIDRAMAQLGVPTNVLGTFAGTANAFQSSTSSQ 900 V+H+GQF ASTLSFNLA G SLS AT I AM ++GVPT V G+F GTA AFQ S SSQ Sbjct: 794 VNHQGQFAASTLSFNLAPGASLSTATQQIQDAMNRIGVPTTVHGSFQGTARAFQDSLSSQ 853 Query: 901 PLLILTALLAVYIVLGILYESLIHPITIISTLPSAGVGALLALMVTGTDFSLIALIGVIL 960 P+LIL AL+ +YIVLG+LYES +HPITI+STLPSAGVGALLAL++T TDFS+IALIGVIL Sbjct: 854 PVLILFALITIYIVLGVLYESYVHPITILSTLPSAGVGALLALILTDTDFSIIALIGVIL 913 Query: 961 LIGIVKKNAIMMIDFALEAERHEGKSPREAIYQACLLRFRPILMTTMAALLGALPLMLGT 1020 LIGIVKKNAIMMIDFALEAER G SP +AI+ AC+LRFRPI+MTTMAALLGALPL LG Sbjct: 914 LIGIVKKNAIMMIDFALEAERSRGMSPADAIFHACVLRFRPIMMTTMAALLGALPLALGH 973 Query: 1021 GVGSELRQPLGITMVGGLLVSQVLTLFTTPVIYLGFD 1057 G G+ELRQPLGI++VGGLLVSQ+LTL+TTPV+YL D Sbjct: 974 GDGAELRQPLGISIVGGLLVSQILTLYTTPVVYLALD 1010 Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 78/92 (84%), Positives = 88/92 (95%) Query: 1080 KKNAIMMVDFAIDAERNRGMSPRDAIFEACKLRFRPIMMTTMAALLGAIPLAIGHGDGAE 1139 KKNAIMM+DFA++AER+RGMSP DAIF AC LRFRPIMMTTMAALLGA+PLA+GHGDGAE Sbjct: 919 KKNAIMMIDFALEAERSRGMSPADAIFHACVLRFRPIMMTTMAALLGALPLALGHGDGAE 978 Query: 1140 LRQPLGISIVGGLVVSQLLTLYTTPVVYLYME 1171 LRQPLGISIVGGL+VSQ+LTLYTTPVVYL ++ Sbjct: 979 LRQPLGISIVGGLLVSQILTLYTTPVVYLALD 1010 >ref|NP_522760.1| drug efflux transmembrane protein [Ralstonia solanacearum GMI1000] emb|CAD18350.1| probable drug efflux transmembrane protein [Ralstonia solanacearum GMI1000] Length = 1033 Score = 1411 bits (3652), Expect = 0.0, Method: Compositional matrix adjust. Identities = 713/1057 (67%), Positives = 859/1057 (81%), Gaps = 47/1057 (4%) Query: 1 MNISLPFIQRPIATTLLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMA 60 MN+S FI RP+AT LLTIG+ALAGI AF LLPVSPLPQVD+PTIS++AS+PGASPETMA Sbjct: 1 MNLSATFIARPVATALLTIGVALAGIAAFNLLPVSPLPQVDFPTISVNASLPGASPETMA 60 Query: 61 ATVATPLERAMGAIAGVTEMTSTSSQNSTRITLQFDLSRDIDGAARDVQAALNAARNLLP 120 ATVATPLER++G IAG+TEMTS S+ STR+TLQFDLSRDIDGAARDVQAA+NA+R+LLP Sbjct: 61 ATVATPLERSLGRIAGITEMTSQSALGSTRVTLQFDLSRDIDGAARDVQAAINASRSLLP 120 Query: 121 TGMPSNPTYRKVNPADAPILILAMTSDTMTQGQMYDAADSIVAQKLSQVRGVGQVSVGGS 180 +G+PSNPTYRKVNPADAPI+IL +TSDT ++G++YDAA +I+AQKLSQ+ GVGQV++GG+ Sbjct: 121 SGLPSNPTYRKVNPADAPIMILGLTSDTKSRGELYDAASTILAQKLSQITGVGQVNIGGA 180 Query: 181 SQPAVRIELNPTALNKYGIGTADVRTAVAATNANRPKGLLEDQDRNWQIYANDQAKTAAE 240 S PAVR+ELNPTALNKYGI T VRT + ATNAN+PKG+LE +R W +YANDQA+ A E Sbjct: 181 SLPAVRVELNPTALNKYGISTETVRTVITATNANKPKGMLEAGNRVWTLYANDQARHAEE 240 Query: 241 YAPLIVSYRNGTPVRVQDVAEVRDSVADVRNAGSSNGKPSVLIIINRQPGANIIDTVDNV 300 Y PLI++YRNG PVR+ DVAEV DSV D+RN GS+NGKPSVL+IINRQPGANIIDTVD + Sbjct: 241 YKPLIIAYRNGAPVRLSDVAEVTDSVQDIRNYGSANGKPSVLLIINRQPGANIIDTVDRI 300 Query: 301 RELLPQLQASIPSAIDMKVVLDRTPTIRASLKETEFTLILSVALVIMVVFLFLRNARATL 360 +LP L+ +IP+ I++ V++DRTPTIRASL++ E TL+LS+ LVIMVV+LFLRN RATL Sbjct: 301 NAILPYLRNTIPAQINLDVMMDRTPTIRASLRDVERTLMLSIGLVIMVVYLFLRNLRATL 360 Query: 361 IPAVAVPVSLIGTFGVMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRHIESGMKP 420 IP+VAVPVSLIGTFGVMYL G+SLDNLSLMALT+ATGFVVDDAIVVLEN+SRHIE+GM+P Sbjct: 361 IPSVAVPVSLIGTFGVMYLCGYSLDNLSLMALTVATGFVVDDAIVVLENVSRHIENGMRP 420 Query: 421 YKAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAILVSLVVSLT 480 +AAL GAREVGFTV+SMS SLIAVFIP+LMM GIVGRLFREFA+TLSVAILVSL +SLT Sbjct: 421 MQAALKGAREVGFTVVSMSFSLIAVFIPLLMMGGIVGRLFREFAVTLSVAILVSLAISLT 480 Query: 481 TTPMMCAQLLRHDPAADAARRQRRHPWLQKIADQSAAIFEDMLLAYQRTLAWALRAAPLM 540 TTPMMCA+LL+ PA+ + W + ++ F +L Y+ +LAWALR + L Sbjct: 481 TTPMMCARLLK--PAS-----EEEPGWFHR---KTEGFFNLLLDGYRHSLAWALRHSWLT 530 Query: 541 MLILLATIALNVYLYKAIPKGFFPQQDTGRLVGGIRGDQAISFQAMRTKLNEFIDIVRAD 600 +LILLAT+ LN YLY +PKGFFPQQD GRL+G I+ DQAISFQAMRTKL +FI IV+ D Sbjct: 531 LLILLATVCLNGYLYVVVPKGFFPQQDVGRLMGFIQADQAISFQAMRTKLVDFIHIVQQD 590 Query: 601 PAVSDVVAFTGGQRRNGGFMYVTLKPLSERKDSADKVVARLRIKTAKVAGARVFLVPVQD 660 PAV +VV FTGG + N G M++ LKPL+ERK SAD+V+ RLR K A+ GA +FL VQD Sbjct: 591 PAVENVVGFTGGSQINSGQMFIQLKPLAERKLSADQVINRLRGKLAREPGANLFLQAVQD 650 Query: 661 IRIGARQSDSQYEYSLKSDDVGLLRIWEPKIRLALSNLKELEDISTDQQDNGLQTTLTID 720 IRIG R S++QY+Y+L++D++ LR WEPKIR AL+ +K L D++TD QD G QT L D Sbjct: 651 IRIGGRPSNAQYQYTLQADNLEELRAWEPKIRQALTQIKSLVDVNTDAQDKGQQTALVFD 710 Query: 721 RESAMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQYHVVMEAAPQYWQSPETLRDTYVS 780 R+ AM G+TP+ ID+ L++ FGQRQ+STIY+ +NQY VVMEAAPQYWQ+PE LRD Y+ Sbjct: 711 RDKAMALGITPKDIDNALNNAFGQRQVSTIYNPLNQYRVVMEAAPQYWQNPEGLRDIYL- 769 Query: 781 LAGSSNLSPTTSSLSTPPALSASGKLNANTGLAQTISTAPSRQIPLAAFSRFEPTTTSLS 840 ++ASG Q+PL+ FS + PT T L+ Sbjct: 770 -------------------ITASGA-----------------QVPLSTFSHYGPTNTPLA 793 Query: 841 VSHEGQFVASTLSFNLAEGVSLSQATAAIDRAMAQLGVPTNVLGTFAGTANAFQSSTSSQ 900 V+H+GQF ASTLSFNLA G SLS AT I AM ++GVPT V G+F GTA AFQ S SSQ Sbjct: 794 VNHQGQFAASTLSFNLAPGASLSAATQQIQDAMNRIGVPTTVHGSFQGTARAFQDSLSSQ 853 Query: 901 PLLILTALLAVYIVLGILYESLIHPITIISTLPSAGVGALLALMVTGTDFSLIALIGVIL 960 P+LIL AL+ +YIVLG+LYES +HPITI+STLPSAGVGALLAL+VT TDFS+IALIGVIL Sbjct: 854 PVLILFALITIYIVLGVLYESYVHPITILSTLPSAGVGALLALIVTDTDFSVIALIGVIL 913 Query: 961 LIGIVKKNAIMMIDFALEAERHEGKSPREAIYQACLLRFRPILMTTMAALLGALPLMLGT 1020 LIGIVKKNAIMMIDFALEAER +G SP +AI+ AC+LRFRPILMTTMAALLGALPL LG Sbjct: 914 LIGIVKKNAIMMIDFALEAERSQGMSPADAIFHACVLRFRPILMTTMAALLGALPLALGH 973 Query: 1021 GVGSELRQPLGITMVGGLLVSQVLTLFTTPVIYLGFD 1057 G G+ELRQPLGI++VGGLLVSQ+LTL+TTPV+YL D Sbjct: 974 GDGAELRQPLGISIVGGLLVSQILTLYTTPVVYLALD 1010 Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 76/92 (82%), Positives = 88/92 (95%) Query: 1080 KKNAIMMVDFAIDAERNRGMSPRDAIFEACKLRFRPIMMTTMAALLGAIPLAIGHGDGAE 1139 KKNAIMM+DFA++AER++GMSP DAIF AC LRFRPI+MTTMAALLGA+PLA+GHGDGAE Sbjct: 919 KKNAIMMIDFALEAERSQGMSPADAIFHACVLRFRPILMTTMAALLGALPLALGHGDGAE 978 Query: 1140 LRQPLGISIVGGLVVSQLLTLYTTPVVYLYME 1171 LRQPLGISIVGGL+VSQ+LTLYTTPVVYL ++ Sbjct: 979 LRQPLGISIVGGLLVSQILTLYTTPVVYLALD 1010 >emb|CBJ40877.1| multidrug efflux system, subunit C [Ralstonia solanacearum CMR15] Length = 1033 Score = 1408 bits (3645), Expect = 0.0, Method: Compositional matrix adjust. Identities = 711/1057 (67%), Positives = 858/1057 (81%), Gaps = 47/1057 (4%) Query: 1 MNISLPFIQRPIATTLLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMA 60 MN+S FI RP+AT LLTIG+ALAG+ AF LLPVSPLPQVD+PTIS++AS+PGASPETMA Sbjct: 1 MNLSATFIARPVATALLTIGVALAGMAAFNLLPVSPLPQVDFPTISVNASLPGASPETMA 60 Query: 61 ATVATPLERAMGAIAGVTEMTSTSSQNSTRITLQFDLSRDIDGAARDVQAALNAARNLLP 120 ATVATPLER++G IAG+TEMTS S+ STR+TLQFDLSRDIDGAARDVQAA+NA+R+LLP Sbjct: 61 ATVATPLERSLGRIAGITEMTSQSALGSTRVTLQFDLSRDIDGAARDVQAAINASRSLLP 120 Query: 121 TGMPSNPTYRKVNPADAPILILAMTSDTMTQGQMYDAADSIVAQKLSQVRGVGQVSVGGS 180 +G+PSNPTYRKVNPADAPI+IL +TSDT ++G++YDAA +I+AQKLSQ+ GVGQV++GG+ Sbjct: 121 SGLPSNPTYRKVNPADAPIMILGLTSDTKSRGELYDAASTILAQKLSQITGVGQVNIGGA 180 Query: 181 SQPAVRIELNPTALNKYGIGTADVRTAVAATNANRPKGLLEDQDRNWQIYANDQAKTAAE 240 S PAVR+ELNPTALNKYGI T VRT + ATNAN+PKG+LE +R W +YANDQA+ A E Sbjct: 181 SLPAVRVELNPTALNKYGISTETVRTVITATNANKPKGMLEAGNRVWTLYANDQARHAEE 240 Query: 241 YAPLIVSYRNGTPVRVQDVAEVRDSVADVRNAGSSNGKPSVLIIINRQPGANIIDTVDNV 300 Y PLI++YRNG PVR+ DVAEV DSV D+RN GS+NGKPSVL+IINRQPGANIIDTVD + Sbjct: 241 YKPLIIAYRNGAPVRLSDVAEVTDSVQDIRNYGSANGKPSVLLIINRQPGANIIDTVDRI 300 Query: 301 RELLPQLQASIPSAIDMKVVLDRTPTIRASLKETEFTLILSVALVIMVVFLFLRNARATL 360 +LP L+ +IP+ I++ V++DRTPTIRASL++ E TL+LS+ LVIMVV+LFLRN RATL Sbjct: 301 NAILPYLRNTIPAQINLDVMMDRTPTIRASLRDVERTLMLSIGLVIMVVYLFLRNLRATL 360 Query: 361 IPAVAVPVSLIGTFGVMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRHIESGMKP 420 IP+VAVPVSLIGTFGVMYL G+SLDNLSLMALT+ATGFVVDDAIVVLEN+SRHIE+GM+P Sbjct: 361 IPSVAVPVSLIGTFGVMYLCGYSLDNLSLMALTVATGFVVDDAIVVLENVSRHIENGMRP 420 Query: 421 YKAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAILVSLVVSLT 480 +AAL GAREVGFTV+SMS SLIAVFIP+LMM GIVGRLFREFA+TLSVAILVSLVVSLT Sbjct: 421 MQAALKGAREVGFTVVSMSFSLIAVFIPLLMMGGIVGRLFREFAVTLSVAILVSLVVSLT 480 Query: 481 TTPMMCAQLLRHDPAADAARRQRRHPWLQKIADQSAAIFEDMLLAYQRTLAWALRAAPLM 540 TPMMCA+LL+ PA+ + W + ++ F +L Y+ +LAWALR + L Sbjct: 481 ATPMMCARLLK--PAS-----EEEPSWFHR---KTEGFFNLLLDGYRHSLAWALRHSWLT 530 Query: 541 MLILLATIALNVYLYKAIPKGFFPQQDTGRLVGGIRGDQAISFQAMRTKLNEFIDIVRAD 600 +LILLAT+ LNVYLY +PKGFFPQQD GRL+G I+ DQ+ISFQAMRTKL +FI IV+ D Sbjct: 531 LLILLATVCLNVYLYIVVPKGFFPQQDVGRLIGFIQADQSISFQAMRTKLVDFIHIVQQD 590 Query: 601 PAVSDVVAFTGGQRRNGGFMYVTLKPLSERKDSADKVVARLRIKTAKVAGARVFLVPVQD 660 PAV +VV FTGG + N G M++ LKPL+ERK SAD+V+ RLR K A+ GA +FL VQD Sbjct: 591 PAVENVVGFTGGSQINSGQMFIQLKPLAERKLSADQVINRLRGKLAREPGANLFLQAVQD 650 Query: 661 IRIGARQSDSQYEYSLKSDDVGLLRIWEPKIRLALSNLKELEDISTDQQDNGLQTTLTID 720 IRIG R S++QY+Y+L++D++ LR WEPKIR AL +K L D++TD QD G QT L D Sbjct: 651 IRIGGRPSNAQYQYTLQADNLEELRAWEPKIRQALMQIKSLVDVNTDSQDKGQQTALVFD 710 Query: 721 RESAMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQYHVVMEAAPQYWQSPETLRDTYVS 780 R+ AM G+TP+ ID+ L++ FGQRQ+STIY+ +NQY VVMEAAPQYWQ+PE LRD Y+ Sbjct: 711 RDKAMAMGITPKDIDNALNNAFGQRQVSTIYNPLNQYRVVMEAAPQYWQNPEGLRDIYL- 769 Query: 781 LAGSSNLSPTTSSLSTPPALSASGKLNANTGLAQTISTAPSRQIPLAAFSRFEPTTTSLS 840 ++ASG Q+PL+ FS + PT T L+ Sbjct: 770 -------------------ITASGA-----------------QVPLSTFSHYGPTNTPLA 793 Query: 841 VSHEGQFVASTLSFNLAEGVSLSQATAAIDRAMAQLGVPTNVLGTFAGTANAFQSSTSSQ 900 V+H+GQF ASTLSFNLA G SLS AT I AM ++GVP V G+F GTA AFQ S SSQ Sbjct: 794 VNHQGQFAASTLSFNLAPGASLSVATQQIQDAMNRIGVPITVHGSFQGTARAFQDSLSSQ 853 Query: 901 PLLILTALLAVYIVLGILYESLIHPITIISTLPSAGVGALLALMVTGTDFSLIALIGVIL 960 P+L+L AL+ +YIVLG+LYES +HPITI+STLPSAGVGALLAL+VT TDFS+IALIGVIL Sbjct: 854 PVLVLFALITIYIVLGVLYESYVHPITILSTLPSAGVGALLALIVTDTDFSVIALIGVIL 913 Query: 961 LIGIVKKNAIMMIDFALEAERHEGKSPREAIYQACLLRFRPILMTTMAALLGALPLMLGT 1020 LIGIVKKNAIMMIDFALEAER +G SP +AI+ AC+LRFRPILMTTMAALLGALPL LG Sbjct: 914 LIGIVKKNAIMMIDFALEAERSQGMSPADAIFHACVLRFRPILMTTMAALLGALPLALGH 973 Query: 1021 GVGSELRQPLGITMVGGLLVSQVLTLFTTPVIYLGFD 1057 G G+ELRQPLGI++VGGLLVSQ+LTL+TTPV+YL D Sbjct: 974 GDGAELRQPLGISIVGGLLVSQILTLYTTPVVYLALD 1010 Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 76/92 (82%), Positives = 88/92 (95%) Query: 1080 KKNAIMMVDFAIDAERNRGMSPRDAIFEACKLRFRPIMMTTMAALLGAIPLAIGHGDGAE 1139 KKNAIMM+DFA++AER++GMSP DAIF AC LRFRPI+MTTMAALLGA+PLA+GHGDGAE Sbjct: 919 KKNAIMMIDFALEAERSQGMSPADAIFHACVLRFRPILMTTMAALLGALPLALGHGDGAE 978 Query: 1140 LRQPLGISIVGGLVVSQLLTLYTTPVVYLYME 1171 LRQPLGISIVGGL+VSQ+LTLYTTPVVYL ++ Sbjct: 979 LRQPLGISIVGGLLVSQILTLYTTPVVYLALD 1010 >ref|YP_003748494.1| multidrug efflux system, subunit C [Ralstonia solanacearum CFBP2957] emb|CBJ54108.1| multidrug efflux system, subunit C [Ralstonia solanacearum CFBP2957] Length = 1033 Score = 1403 bits (3631), Expect = 0.0, Method: Compositional matrix adjust. Identities = 709/1053 (67%), Positives = 857/1053 (81%), Gaps = 47/1053 (4%) Query: 1 MNISLPFIQRPIATTLLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMA 60 MN+S FI RP+AT LLTIG+ALAGI AF LLPVSPLPQVD+PTIS++AS+PGASPETMA Sbjct: 1 MNLSATFIARPVATALLTIGVALAGIAAFNLLPVSPLPQVDFPTISVNASLPGASPETMA 60 Query: 61 ATVATPLERAMGAIAGVTEMTSTSSQNSTRITLQFDLSRDIDGAARDVQAALNAARNLLP 120 ATVATPLER++G IAG+TEMTS SS STR+TLQFDLSRDIDGAARDVQAA+NA+R+LLP Sbjct: 61 ATVATPLERSLGRIAGITEMTSQSSLGSTRVTLQFDLSRDIDGAARDVQAAINASRSLLP 120 Query: 121 TGMPSNPTYRKVNPADAPILILAMTSDTMTQGQMYDAADSIVAQKLSQVRGVGQVSVGGS 180 +G+PSNPTYRKVNPADAPI+IL +TSDT ++G++YDAA +I+AQKLSQ+ GVGQV++GG+ Sbjct: 121 SGLPSNPTYRKVNPADAPIMILGLTSDTKSRGELYDAASTILAQKLSQISGVGQVNIGGA 180 Query: 181 SQPAVRIELNPTALNKYGIGTADVRTAVAATNANRPKGLLEDQDRNWQIYANDQAKTAAE 240 S PAVR+ELNPTALNKY I T VRT + ATNAN+PKG+LE DR W IYANDQA+ A E Sbjct: 181 SLPAVRVELNPTALNKYAISTETVRTVITATNANKPKGMLEAGDRVWSIYANDQARKAEE 240 Query: 241 YAPLIVSYRNGTPVRVQDVAEVRDSVADVRNAGSSNGKPSVLIIINRQPGANIIDTVDNV 300 Y PLI++YRNG PVR+ DVAEV DSV D+RN GS+NGKPSVL+IINRQPGANIIDTVD + Sbjct: 241 YKPLIIAYRNGAPVRLSDVAEVTDSVQDIRNYGSANGKPSVLLIINRQPGANIIDTVDRI 300 Query: 301 RELLPQLQASIPSAIDMKVVLDRTPTIRASLKETEFTLILSVALVIMVVFLFLRNARATL 360 +LP L+ +IP+ I++ V++DRTPTIRASL++ E TL+LS+ LVIMVV+LFLRN RATL Sbjct: 301 NAILPYLRNTIPAQINLDVMMDRTPTIRASLRDVERTLMLSIGLVIMVVYLFLRNLRATL 360 Query: 361 IPAVAVPVSLIGTFGVMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRHIESGMKP 420 IP+VAVPVSLIGTFGVMYL G+SLDNLSLMALT+ATGFVVDDAIVVLEN+SRHIE+GM+P Sbjct: 361 IPSVAVPVSLIGTFGVMYLCGYSLDNLSLMALTVATGFVVDDAIVVLENVSRHIENGMRP 420 Query: 421 YKAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAILVSLVVSLT 480 +AAL GAREVGFTV+SMS SLIAVFIP+LMM GIVGRLFREFA+TLSVAILVSLV+SLT Sbjct: 421 MQAALKGAREVGFTVVSMSFSLIAVFIPLLMMGGIVGRLFREFAVTLSVAILVSLVISLT 480 Query: 481 TTPMMCAQLLRHDPAADAARRQRRHPWLQKIADQSAAIFEDMLLAYQRTLAWALRAAPLM 540 TTPMMCA+LL+ PA+ + W + ++ F +L Y+ +LAWALR + L Sbjct: 481 TTPMMCARLLK--PAS-----EEEPGWFHR---KTERFFTLLLDGYRHSLAWALRHSWLT 530 Query: 541 MLILLATIALNVYLYKAIPKGFFPQQDTGRLVGGIRGDQAISFQAMRTKLNEFIDIVRAD 600 +LILLAT+ LNVYLY +PKGFFPQQD GRL+G I+ DQ+ISFQAMRTKL +FI IV+ D Sbjct: 531 LLILLATVCLNVYLYIVVPKGFFPQQDVGRLMGFIQADQSISFQAMRTKLVDFIHIVQQD 590 Query: 601 PAVSDVVAFTGGQRRNGGFMYVTLKPLSERKDSADKVVARLRIKTAKVAGARVFLVPVQD 660 PAV +VV FTGG + N G M++ LKPL+ERK SAD+V+ RLR K A+ GA +FL VQD Sbjct: 591 PAVENVVGFTGGSQINSGQMFIQLKPLAERKLSADQVINRLRGKLAREPGANLFLQAVQD 650 Query: 661 IRIGARQSDSQYEYSLKSDDVGLLRIWEPKIRLALSNLKELEDISTDQQDNGLQTTLTID 720 IRIG R S++QY+Y+L++D++ LR WEPKIR AL +K L D++TD QD GLQT L D Sbjct: 651 IRIGGRPSNAQYQYTLQADNLEELRAWEPKIRQALMQIKSLLDVNTDAQDKGLQTALVFD 710 Query: 721 RESAMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQYHVVMEAAPQYWQSPETLRDTYVS 780 R+ AM G++P+ ID+ L++ FGQRQ+STIY+ +NQY VVMEAAPQYWQ+P L+D Y+ Sbjct: 711 RDKAMALGISPKDIDNALNNAFGQRQVSTIYNPLNQYRVVMEAAPQYWQNPAGLQDIYL- 769 Query: 781 LAGSSNLSPTTSSLSTPPALSASGKLNANTGLAQTISTAPSRQIPLAAFSRFEPTTTSLS 840 +++SG Q+PL+ FS + P+ T L+ Sbjct: 770 -------------------ITSSGA-----------------QVPLSTFSHYGPSNTPLA 793 Query: 841 VSHEGQFVASTLSFNLAEGVSLSQATAAIDRAMAQLGVPTNVLGTFAGTANAFQSSTSSQ 900 V+H+GQF ASTLSFNLA G SLS AT I AM ++GVPT V G+F GTA AFQ S SSQ Sbjct: 794 VNHQGQFAASTLSFNLAPGASLSTATQQIQDAMNRIGVPTTVHGSFQGTARAFQDSLSSQ 853 Query: 901 PLLILTALLAVYIVLGILYESLIHPITIISTLPSAGVGALLALMVTGTDFSLIALIGVIL 960 P+LIL AL+ +YIVLG+LYES +HPITI+STLPSAGVGALLAL++T TDFS+IALIGVIL Sbjct: 854 PVLILFALITIYIVLGVLYESYMHPITILSTLPSAGVGALLALILTDTDFSIIALIGVIL 913 Query: 961 LIGIVKKNAIMMIDFALEAERHEGKSPREAIYQACLLRFRPILMTTMAALLGALPLMLGT 1020 LIGIVKKNAIMMIDFALEAER +G SP +AI+ AC+LRFRPILMTTMAALLGALPL LG Sbjct: 914 LIGIVKKNAIMMIDFALEAERSQGMSPADAIFHACVLRFRPILMTTMAALLGALPLALGH 973 Query: 1021 GVGSELRQPLGITMVGGLLVSQVLTLFTTPVIY 1053 G G+ELRQPLGI++VGGLLVSQ+LTL+TTPV+Y Sbjct: 974 GDGAELRQPLGISIVGGLLVSQILTLYTTPVVY 1006 Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 75/88 (85%), Positives = 85/88 (96%) Query: 1080 KKNAIMMVDFAIDAERNRGMSPRDAIFEACKLRFRPIMMTTMAALLGAIPLAIGHGDGAE 1139 KKNAIMM+DFA++AER++GMSP DAIF AC LRFRPI+MTTMAALLGA+PLA+GHGDGAE Sbjct: 919 KKNAIMMIDFALEAERSQGMSPADAIFHACVLRFRPILMTTMAALLGALPLALGHGDGAE 978 Query: 1140 LRQPLGISIVGGLVVSQLLTLYTTPVVY 1167 LRQPLGISIVGGL+VSQ+LTLYTTPVVY Sbjct: 979 LRQPLGISIVGGLLVSQILTLYTTPVVY 1006 >gb|AEG71458.1| multidrug efflux system, subunit c [Ralstonia solanacearum Po82] Length = 1033 Score = 1400 bits (3623), Expect = 0.0, Method: Compositional matrix adjust. Identities = 705/1053 (66%), Positives = 857/1053 (81%), Gaps = 47/1053 (4%) Query: 1 MNISLPFIQRPIATTLLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMA 60 MN+S FI RP+AT LLTIG+ALAGI AF LLPVSPLPQVD+PTIS++AS+PGASPETMA Sbjct: 1 MNLSATFIARPVATALLTIGVALAGIAAFNLLPVSPLPQVDFPTISVNASLPGASPETMA 60 Query: 61 ATVATPLERAMGAIAGVTEMTSTSSQNSTRITLQFDLSRDIDGAARDVQAALNAARNLLP 120 ATVATPLER++G IAG+TEMTS SS STR+TLQFDLSRDIDGAARDVQAA+NA+R+LLP Sbjct: 61 ATVATPLERSLGRIAGITEMTSQSSLGSTRVTLQFDLSRDIDGAARDVQAAINASRSLLP 120 Query: 121 TGMPSNPTYRKVNPADAPILILAMTSDTMTQGQMYDAADSIVAQKLSQVRGVGQVSVGGS 180 +G+PSNPTYRKVNPADAPI+IL +TSDT ++G++YDAA +I+AQKLSQ+ GVGQV++GG+ Sbjct: 121 SGLPSNPTYRKVNPADAPIMILGLTSDTKSRGELYDAASTILAQKLSQISGVGQVNIGGA 180 Query: 181 SQPAVRIELNPTALNKYGIGTADVRTAVAATNANRPKGLLEDQDRNWQIYANDQAKTAAE 240 S PAVR+ELNPTALNKY I T VRT + ATNAN+PKG+LE DR W IYANDQA+ A E Sbjct: 181 SLPAVRVELNPTALNKYAISTETVRTVITATNANKPKGMLEAGDRVWTIYANDQARKAEE 240 Query: 241 YAPLIVSYRNGTPVRVQDVAEVRDSVADVRNAGSSNGKPSVLIIINRQPGANIIDTVDNV 300 Y PLI++YRNG PVR+ DVAEV DSV D+RN GS+NGKPSVL+IINRQPGANIIDTVD + Sbjct: 241 YKPLIIAYRNGAPVRLSDVAEVTDSVQDIRNYGSANGKPSVLLIINRQPGANIIDTVDRI 300 Query: 301 RELLPQLQASIPSAIDMKVVLDRTPTIRASLKETEFTLILSVALVIMVVFLFLRNARATL 360 +LP L+ +IP+ I++ V++DRTPTIRASL++ E TL+LS+ LVIMVV+LFLRN RATL Sbjct: 301 NAILPYLRNTIPAQINLDVMMDRTPTIRASLRDVERTLMLSIGLVIMVVYLFLRNLRATL 360 Query: 361 IPAVAVPVSLIGTFGVMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRHIESGMKP 420 IP+VAVPVSLIGTFGVMYL G+SLDNLSLMALT+ATGFVVDDAIVVLEN+SRHIE+GM+P Sbjct: 361 IPSVAVPVSLIGTFGVMYLCGYSLDNLSLMALTVATGFVVDDAIVVLENVSRHIENGMRP 420 Query: 421 YKAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAILVSLVVSLT 480 +AAL GAREVGFTV+SMS SLIAVFIP+LMM GIVGRLFREFA+TLSVAILVSLV+SLT Sbjct: 421 MQAALKGAREVGFTVVSMSFSLIAVFIPLLMMGGIVGRLFREFAVTLSVAILVSLVISLT 480 Query: 481 TTPMMCAQLLRHDPAADAARRQRRHPWLQKIADQSAAIFEDMLLAYQRTLAWALRAAPLM 540 TTPMMCA+LL+ PA+ + W + ++ F +L Y+ +LAWALR + L Sbjct: 481 TTPMMCARLLK--PAS-----EEEPGWFHR---KTERFFTLLLDGYRHSLAWALRHSWLT 530 Query: 541 MLILLATIALNVYLYKAIPKGFFPQQDTGRLVGGIRGDQAISFQAMRTKLNEFIDIVRAD 600 ++ILLAT+ LNVYLY +PKGFFPQQD GRL+G ++ DQ+ISFQAMRTKL +FI IV+ D Sbjct: 531 LMILLATVCLNVYLYIVVPKGFFPQQDVGRLMGFVQADQSISFQAMRTKLADFIHIVQQD 590 Query: 601 PAVSDVVAFTGGQRRNGGFMYVTLKPLSERKDSADKVVARLRIKTAKVAGARVFLVPVQD 660 PAV VV FTGG + N G M++ LKPL++RK SAD+V+ RLR K A+ GA +FL VQD Sbjct: 591 PAVDSVVGFTGGSQINSGQMFIQLKPLADRKLSADQVINRLRGKLAREPGANLFLQAVQD 650 Query: 661 IRIGARQSDSQYEYSLKSDDVGLLRIWEPKIRLALSNLKELEDISTDQQDNGLQTTLTID 720 IRIG R S++QY+Y+L++D++ LR+WEPKIR AL +K L D+++D QD GLQT L D Sbjct: 651 IRIGGRPSNAQYQYTLQADNLEELRVWEPKIRQALMQIKSLLDVNSDAQDKGLQTALVFD 710 Query: 721 RESAMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQYHVVMEAAPQYWQSPETLRDTYVS 780 R+ AM G++P+ ID+ L++ FGQRQ+STIY+ +NQY VVMEAAPQYWQ+PE L+D Y+ Sbjct: 711 RDKAMALGISPKDIDNALNNAFGQRQVSTIYNPLNQYRVVMEAAPQYWQNPEGLQDIYL- 769 Query: 781 LAGSSNLSPTTSSLSTPPALSASGKLNANTGLAQTISTAPSRQIPLAAFSRFEPTTTSLS 840 +++SG Q+PL+ S + P+ T L+ Sbjct: 770 -------------------ITSSGA-----------------QVPLSTLSHYGPSNTPLA 793 Query: 841 VSHEGQFVASTLSFNLAEGVSLSQATAAIDRAMAQLGVPTNVLGTFAGTANAFQSSTSSQ 900 V+H+GQF ASTLSFNLA G SLS AT I AM ++GVPT V G+F GTA AFQ S SSQ Sbjct: 794 VNHQGQFAASTLSFNLAPGASLSTATQQIQDAMNRIGVPTTVHGSFQGTARAFQDSLSSQ 853 Query: 901 PLLILTALLAVYIVLGILYESLIHPITIISTLPSAGVGALLALMVTGTDFSLIALIGVIL 960 P+LIL AL+ +YIVLG+LYES +HPITI+STLPSAGVGALLAL++T TDFS+IALIGVIL Sbjct: 854 PVLILFALITIYIVLGVLYESYMHPITILSTLPSAGVGALLALILTDTDFSIIALIGVIL 913 Query: 961 LIGIVKKNAIMMIDFALEAERHEGKSPREAIYQACLLRFRPILMTTMAALLGALPLMLGT 1020 LIGIVKKNAIMMIDFALEAER +G SP +AI+ AC+LRFRPILMTTMAALLGALPL LG Sbjct: 914 LIGIVKKNAIMMIDFALEAERSQGMSPADAIFHACVLRFRPILMTTMAALLGALPLALGH 973 Query: 1021 GVGSELRQPLGITMVGGLLVSQVLTLFTTPVIY 1053 G G+ELRQPLGI++VGGLLVSQ+LTL+TTPV+Y Sbjct: 974 GDGAELRQPLGISIVGGLLVSQILTLYTTPVVY 1006 Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 75/88 (85%), Positives = 85/88 (96%) Query: 1080 KKNAIMMVDFAIDAERNRGMSPRDAIFEACKLRFRPIMMTTMAALLGAIPLAIGHGDGAE 1139 KKNAIMM+DFA++AER++GMSP DAIF AC LRFRPI+MTTMAALLGA+PLA+GHGDGAE Sbjct: 919 KKNAIMMIDFALEAERSQGMSPADAIFHACVLRFRPILMTTMAALLGALPLALGHGDGAE 978 Query: 1140 LRQPLGISIVGGLVVSQLLTLYTTPVVY 1167 LRQPLGISIVGGL+VSQ+LTLYTTPVVY Sbjct: 979 LRQPLGISIVGGLLVSQILTLYTTPVVY 1006 >ref|ZP_00942673.1| Transmembrane drug efflux pump [Ralstonia solanacearum UW551] ref|YP_002257920.1| drug efflux protein [Ralstonia solanacearum IPO1609] gb|EAP74812.1| Transmembrane drug efflux pump [Ralstonia solanacearum UW551] emb|CAQ59813.1| drug efflux protein [Ralstonia solanacearum IPO1609] Length = 1033 Score = 1398 bits (3618), Expect = 0.0, Method: Compositional matrix adjust. Identities = 706/1053 (67%), Positives = 855/1053 (81%), Gaps = 47/1053 (4%) Query: 1 MNISLPFIQRPIATTLLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMA 60 MN+S FI RP+AT LLTIG+ALAGI AF LLPVSPLPQVD+PTIS++AS+PGASPETMA Sbjct: 1 MNLSATFIARPVATALLTIGVALAGIAAFNLLPVSPLPQVDFPTISVNASLPGASPETMA 60 Query: 61 ATVATPLERAMGAIAGVTEMTSTSSQNSTRITLQFDLSRDIDGAARDVQAALNAARNLLP 120 ATVATPLER++G IAG+TEMTS SS STR+TLQFDLSRDIDGAARDVQAA+NA+R+LLP Sbjct: 61 ATVATPLERSLGRIAGITEMTSQSSLGSTRVTLQFDLSRDIDGAARDVQAAINASRSLLP 120 Query: 121 TGMPSNPTYRKVNPADAPILILAMTSDTMTQGQMYDAADSIVAQKLSQVRGVGQVSVGGS 180 +G+PSNPTYRKVNPADAPI+IL +TSDT ++G++YDAA +I+AQKLSQ+ GVGQV++GG+ Sbjct: 121 SGLPSNPTYRKVNPADAPIMILGLTSDTKSRGELYDAASTILAQKLSQISGVGQVNIGGA 180 Query: 181 SQPAVRIELNPTALNKYGIGTADVRTAVAATNANRPKGLLEDQDRNWQIYANDQAKTAAE 240 S PAVR+ELNPTALNKY I T VRT + ATNAN+PKG+LE DR W IYANDQA+ A E Sbjct: 181 SLPAVRVELNPTALNKYAISTETVRTVITATNANKPKGMLEAGDRVWTIYANDQARKAEE 240 Query: 241 YAPLIVSYRNGTPVRVQDVAEVRDSVADVRNAGSSNGKPSVLIIINRQPGANIIDTVDNV 300 Y PLI++YRNG PVR+ DVAEV DSV D+RN GS+NGKPSVL+IINRQPGANIIDTVD + Sbjct: 241 YKPLIIAYRNGAPVRLSDVAEVTDSVQDIRNYGSANGKPSVLLIINRQPGANIIDTVDRI 300 Query: 301 RELLPQLQASIPSAIDMKVVLDRTPTIRASLKETEFTLILSVALVIMVVFLFLRNARATL 360 +LP L+ +IP+ I++ V++DRTPTIRASL++ E TL+LS+ LVIMVV+LFLRN RAT Sbjct: 301 NAILPYLRNTIPAQINLDVMMDRTPTIRASLRDVERTLMLSIGLVIMVVYLFLRNLRATF 360 Query: 361 IPAVAVPVSLIGTFGVMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRHIESGMKP 420 IP+VAVPVSLIGTFGVMYL G+SLDNLSLMALT+ATGFVVDDAIVVLEN+SRHIE+GM+P Sbjct: 361 IPSVAVPVSLIGTFGVMYLCGYSLDNLSLMALTVATGFVVDDAIVVLENVSRHIENGMRP 420 Query: 421 YKAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAILVSLVVSLT 480 +AAL GAREVGFTV+SMS SLIAVFIP+LMM GIVGRLFREFA+TLSVAILVSLV+SLT Sbjct: 421 MQAALKGAREVGFTVVSMSFSLIAVFIPLLMMGGIVGRLFREFAVTLSVAILVSLVISLT 480 Query: 481 TTPMMCAQLLRHDPAADAARRQRRHPWLQKIADQSAAIFEDMLLAYQRTLAWALRAAPLM 540 TTPMMCA+LL+ PA+ + W + ++ F +L Y+ +LAWALR + L Sbjct: 481 TTPMMCARLLK--PAS-----EEEPGWFHR---KTERFFTLLLDGYRHSLAWALRHSWLT 530 Query: 541 MLILLATIALNVYLYKAIPKGFFPQQDTGRLVGGIRGDQAISFQAMRTKLNEFIDIVRAD 600 ++ILLAT+ LNVYLY +PKGFFPQQD GRL+G I+ DQ+ISFQAMRTKL +FI IV+ D Sbjct: 531 LMILLATVCLNVYLYIVVPKGFFPQQDVGRLMGFIQADQSISFQAMRTKLVDFIHIVQQD 590 Query: 601 PAVSDVVAFTGGQRRNGGFMYVTLKPLSERKDSADKVVARLRIKTAKVAGARVFLVPVQD 660 PAV VV FTGG + N G M++ LKPL++RK SAD+V+ RLR K A+ GA +FL VQD Sbjct: 591 PAVDSVVGFTGGSQINSGQMFIQLKPLADRKLSADQVINRLRGKLAREPGANLFLQAVQD 650 Query: 661 IRIGARQSDSQYEYSLKSDDVGLLRIWEPKIRLALSNLKELEDISTDQQDNGLQTTLTID 720 IRIG R S++QY+Y+L++D++ LR WEPKIR AL +K L D+++D QD GLQT L D Sbjct: 651 IRIGGRPSNAQYQYTLQADNLEELRAWEPKIRQALMQIKSLLDVNSDAQDKGLQTALVFD 710 Query: 721 RESAMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQYHVVMEAAPQYWQSPETLRDTYVS 780 R+ AM G++P+ ID+ L++ FGQRQ+STIY+ +NQY VVMEAAPQYWQ+PE L+D Y+ Sbjct: 711 RDKAMALGISPKDIDNALNNAFGQRQVSTIYNPLNQYRVVMEAAPQYWQNPEGLQDIYL- 769 Query: 781 LAGSSNLSPTTSSLSTPPALSASGKLNANTGLAQTISTAPSRQIPLAAFSRFEPTTTSLS 840 +++SG Q+PL+ FS + P+ T L+ Sbjct: 770 -------------------ITSSGA-----------------QVPLSTFSHYGPSNTPLA 793 Query: 841 VSHEGQFVASTLSFNLAEGVSLSQATAAIDRAMAQLGVPTNVLGTFAGTANAFQSSTSSQ 900 V+H+GQF ASTLSFNLA G SLS AT I AM +LGVPT V G+F GTA AFQ S SSQ Sbjct: 794 VNHQGQFAASTLSFNLAPGASLSTATQQIQDAMNRLGVPTTVHGSFQGTARAFQDSLSSQ 853 Query: 901 PLLILTALLAVYIVLGILYESLIHPITIISTLPSAGVGALLALMVTGTDFSLIALIGVIL 960 P+LIL AL+ +YIVLG+LYES +HPITI+STLPSAGVGALLAL++T TDFS+IALIGVIL Sbjct: 854 PVLILFALITIYIVLGVLYESYMHPITILSTLPSAGVGALLALILTDTDFSIIALIGVIL 913 Query: 961 LIGIVKKNAIMMIDFALEAERHEGKSPREAIYQACLLRFRPILMTTMAALLGALPLMLGT 1020 LIGIVKKNAIMMIDFAL AER +G SP +AI+ AC+LRFRPILMTTMAALLGALPL LG Sbjct: 914 LIGIVKKNAIMMIDFALAAERSQGMSPADAIFHACVLRFRPILMTTMAALLGALPLALGH 973 Query: 1021 GVGSELRQPLGITMVGGLLVSQVLTLFTTPVIY 1053 G G+ELRQPLGI++VGGLLVSQ+LTL+TTPV+Y Sbjct: 974 GDGAELRQPLGISIVGGLLVSQILTLYTTPVVY 1006 Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 75/88 (85%), Positives = 84/88 (95%) Query: 1080 KKNAIMMVDFAIDAERNRGMSPRDAIFEACKLRFRPIMMTTMAALLGAIPLAIGHGDGAE 1139 KKNAIMM+DFA+ AER++GMSP DAIF AC LRFRPI+MTTMAALLGA+PLA+GHGDGAE Sbjct: 919 KKNAIMMIDFALAAERSQGMSPADAIFHACVLRFRPILMTTMAALLGALPLALGHGDGAE 978 Query: 1140 LRQPLGISIVGGLVVSQLLTLYTTPVVY 1167 LRQPLGISIVGGL+VSQ+LTLYTTPVVY Sbjct: 979 LRQPLGISIVGGLLVSQILTLYTTPVVY 1006 >emb|CCA86798.1| multidrug efflux system, subunit C [Ralstonia syzygii R24] Length = 1033 Score = 1396 bits (3614), Expect = 0.0, Method: Compositional matrix adjust. Identities = 714/1057 (67%), Positives = 859/1057 (81%), Gaps = 47/1057 (4%) Query: 1 MNISLPFIQRPIATTLLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMA 60 MN+S FI RP+AT LLTIG ALAGI AF LLPVSPLPQVD+PTIS++AS+PGASPETMA Sbjct: 1 MNLSATFIARPVATALLTIGAALAGIAAFNLLPVSPLPQVDFPTISVNASLPGASPETMA 60 Query: 61 ATVATPLERAMGAIAGVTEMTSTSSQNSTRITLQFDLSRDIDGAARDVQAALNAARNLLP 120 ATVATPLER++G IAG+TEMTS S+ STR+TLQFDLSRDIDGAARDVQAA+NA+R+LLP Sbjct: 61 ATVATPLERSLGRIAGITEMTSQSALGSTRVTLQFDLSRDIDGAARDVQAAINASRSLLP 120 Query: 121 TGMPSNPTYRKVNPADAPILILAMTSDTMTQGQMYDAADSIVAQKLSQVRGVGQVSVGGS 180 +G+PSNPTYRKVNPADAPI+IL +TSDT ++G++YDAA +I+AQKLSQ+ GVGQV++GG+ Sbjct: 121 SGLPSNPTYRKVNPADAPIMILGLTSDTKSRGELYDAASTILAQKLSQISGVGQVNIGGA 180 Query: 181 SQPAVRIELNPTALNKYGIGTADVRTAVAATNANRPKGLLEDQDRNWQIYANDQAKTAAE 240 S PAVR+ELNPTALNKY I VRT + ATNAN+PKG+LE DR W IYANDQA+ A E Sbjct: 181 SLPAVRVELNPTALNKYAISAETVRTVITATNANKPKGMLEAGDRVWTIYANDQARHAEE 240 Query: 241 YAPLIVSYRNGTPVRVQDVAEVRDSVADVRNAGSSNGKPSVLIIINRQPGANIIDTVDNV 300 Y PLI++YRNG PVR+ DVAEV DSV D+RN GS+NGKPSVL+IINRQPGANIIDTVD + Sbjct: 241 YKPLIIAYRNGAPVRLSDVAEVTDSVQDIRNYGSANGKPSVLLIINRQPGANIIDTVDRI 300 Query: 301 RELLPQLQASIPSAIDMKVVLDRTPTIRASLKETEFTLILSVALVIMVVFLFLRNARATL 360 +LP L+ +IP+ I++ V++DRTPTIRASL++ E TLILS+ LVIMVV+LFLRN RATL Sbjct: 301 NTILPYLRNTIPAQINLDVMMDRTPTIRASLRDVERTLILSIGLVIMVVYLFLRNLRATL 360 Query: 361 IPAVAVPVSLIGTFGVMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRHIESGMKP 420 IP+VAVPVSLIGTFGVMYL G+SLDNLSLMALT+ATGFVVDDAIVVLEN+SRHIE+GM+P Sbjct: 361 IPSVAVPVSLIGTFGVMYLCGYSLDNLSLMALTVATGFVVDDAIVVLENVSRHIENGMRP 420 Query: 421 YKAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAILVSLVVSLT 480 +AAL GAREVGFTV+SMS SLIAVFIP+LMM GIVGRLFREFA+TLSVAILVSL +SLT Sbjct: 421 MQAALKGAREVGFTVVSMSFSLIAVFIPLLMMGGIVGRLFREFAVTLSVAILVSLAISLT 480 Query: 481 TTPMMCAQLLRHDPAADAARRQRRHPWLQKIADQSAAIFEDMLLAYQRTLAWALRAAPLM 540 TTPMMCA+LL+ PA+ + W + ++ + F +L Y+ +LAWALR + L Sbjct: 481 TTPMMCARLLK--PAS-----EEEPGWFHR---KTESFFTLLLDGYRHSLAWALRHSWLT 530 Query: 541 MLILLATIALNVYLYKAIPKGFFPQQDTGRLVGGIRGDQAISFQAMRTKLNEFIDIVRAD 600 +LILLAT+ LNVYLY +PKGFFPQQD GRL+G I+ DQ+ISFQAMRTKL +FI IV+ D Sbjct: 531 LLILLATVCLNVYLYVVVPKGFFPQQDVGRLMGFIQADQSISFQAMRTKLVDFIHIVQQD 590 Query: 601 PAVSDVVAFTGGQRRNGGFMYVTLKPLSERKDSADKVVARLRIKTAKVAGARVFLVPVQD 660 PAV +VV FTGG + N G M++ LKPLSERK SAD+V+ RLR K A+ GA +FL VQD Sbjct: 591 PAVENVVGFTGGSQINSGQMFIQLKPLSERKLSADQVINRLRGKLAREPGANLFLQAVQD 650 Query: 661 IRIGARQSDSQYEYSLKSDDVGLLRIWEPKIRLALSNLKELEDISTDQQDNGLQTTLTID 720 IRIG R S++QY+Y+L++D++ LR WEPKIR AL +K L D++TD QD GLQT+L D Sbjct: 651 IRIGGRPSNAQYQYTLQADNLEELRAWEPKIRQALMQIKSLVDVNTDAQDKGLQTSLVFD 710 Query: 721 RESAMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQYHVVMEAAPQYWQSPETLRDTYVS 780 R+ AM G+TP+ ID+ L++ FGQRQ+STIY+ +NQY VVMEAAPQYWQ+PE LRD Y+ Sbjct: 711 RDKAMALGITPKDIDNALNNAFGQRQVSTIYNPLNQYRVVMEAAPQYWQNPEGLRDIYL- 769 Query: 781 LAGSSNLSPTTSSLSTPPALSASGKLNANTGLAQTISTAPSRQIPLAAFSRFEPTTTSLS 840 ++ASG Q+PL+ FS +EPT T L+ Sbjct: 770 -------------------ITASGA-----------------QVPLSTFSHYEPTNTPLA 793 Query: 841 VSHEGQFVASTLSFNLAEGVSLSQATAAIDRAMAQLGVPTNVLGTFAGTANAFQSSTSSQ 900 V+H+GQF ASTLSFNLA G SLS AT I AM ++GVP+ V G+F GTA AFQ S SSQ Sbjct: 794 VNHQGQFAASTLSFNLAPGASLSAATQQIQDAMNRIGVPSTVHGSFQGTARAFQDSLSSQ 853 Query: 901 PLLILTALLAVYIVLGILYESLIHPITIISTLPSAGVGALLALMVTGTDFSLIALIGVIL 960 P+LIL AL+ +YIVLG+LYES +HPITI+STLPSAGVGALLAL++T TDFS+IALIGVIL Sbjct: 854 PVLILFALITIYIVLGVLYESYVHPITILSTLPSAGVGALLALILTDTDFSIIALIGVIL 913 Query: 961 LIGIVKKNAIMMIDFALEAERHEGKSPREAIYQACLLRFRPILMTTMAALLGALPLMLGT 1020 LIGIVKKNAIMMIDFALEAER G SP +AI+ AC+LRFRPI+MTTMAALLGALPL LG Sbjct: 914 LIGIVKKNAIMMIDFALEAERSRGMSPADAIFHACVLRFRPIMMTTMAALLGALPLALGH 973 Query: 1021 GVGSELRQPLGITMVGGLLVSQVLTLFTTPVIYLGFD 1057 G G+ELRQPLGI++VGGLLVSQ+LTL+TTPV+YL D Sbjct: 974 GDGAELRQPLGISIVGGLLVSQILTLYTTPVVYLALD 1010 Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 78/92 (84%), Positives = 88/92 (95%) Query: 1080 KKNAIMMVDFAIDAERNRGMSPRDAIFEACKLRFRPIMMTTMAALLGAIPLAIGHGDGAE 1139 KKNAIMM+DFA++AER+RGMSP DAIF AC LRFRPIMMTTMAALLGA+PLA+GHGDGAE Sbjct: 919 KKNAIMMIDFALEAERSRGMSPADAIFHACVLRFRPIMMTTMAALLGALPLALGHGDGAE 978 Query: 1140 LRQPLGISIVGGLVVSQLLTLYTTPVVYLYME 1171 LRQPLGISIVGGL+VSQ+LTLYTTPVVYL ++ Sbjct: 979 LRQPLGISIVGGLLVSQILTLYTTPVVYLALD 1010