BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0061.p (516 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774943.1| RND family efflux transporter MFP subunit [H... 912 0.0 ref|YP_004751840.1| putative resistance transmembrane protein [C... 488 e-136 ref|YP_001892710.1| efflux transporter, RND family, MFP subunit ... 426 e-117 ref|YP_003750180.1| multidrug efflux system, subunit a [Ralstoni... 425 e-116 ref|ZP_07673605.1| multidrug RND efflux transporter, membrane fu... 423 e-116 ref|ZP_00942675.1| Acriflavin resistance periplasmic protein [Ra... 419 e-115 gb|AEG71461.1| multidrug efflux system, subunit a [Ralstonia sol... 418 e-114 emb|CBJ40875.1| multidrug efflux system, subunit A [Ralstonia so... 418 e-114 ref|NP_522758.1| putative resistance transmembrane protein [Rals... 417 e-114 ref|YP_003748492.1| multidrug efflux system, subunit A [Ralstoni... 416 e-114 >ref|YP_003774943.1| RND family efflux transporter MFP subunit [Herbaspirillum seropedicae SmR1] gb|ADJ63035.1| efflux transporter, RND family, MFP subunit protein [Herbaspirillum seropedicae SmR1] Length = 466 Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust. Identities = 458/461 (99%), Positives = 458/461 (99%) Query: 53 MAAMGGPGGRPGPGAAGARRPGGPGAFGSQTMPVGVAKARLQDVNVFLNGLGAVTPTATA 112 MAAMGGPGGRPGPGAAGARRPGGPGAFG QTMPVGVAKARLQDVNVFLNGLGAVTPTATA Sbjct: 1 MAAMGGPGGRPGPGAAGARRPGGPGAFGPQTMPVGVAKARLQDVNVFLNGLGAVTPTATA 60 Query: 113 TVRARVDGQLMKLHYKEGQVVKAGDLLAEIDPRSLQAALTQAEGQLARDRALLASARLDL 172 TVRARVDGQLMKLHYKEGQVVKAGDLLAEIDPRSLQAALTQAEGQLARDRALLASARLDL Sbjct: 61 TVRARVDGQLMKLHYKEGQVVKAGDLLAEIDPRSLQAALTQAEGQLARDRALLASARLDL 120 Query: 173 KRYQTLLAQDSIASQQVDTQAALVKQYEGTVKADEGNVASARLQLSFTRVTAPISGRLGL 232 KRYQTLLAQDSIASQQVDTQ ALVKQYEGTVKADEGNVASARLQLSFTRVTAPISGRLGL Sbjct: 121 KRYQTLLAQDSIASQQVDTQVALVKQYEGTVKADEGNVASARLQLSFTRVTAPISGRLGL 180 Query: 233 RQADVGNNVTTSDTNGLVIITQLQPITAIFSIPEDNIPKVLQQLQSGRKLPAQAWDREQK 292 RQADVGNNVTTSDTNGLVIITQLQPITAIFSIPEDNIPKVLQQLQSGRKLPAQAWDREQK Sbjct: 181 RQADVGNNVTTSDTNGLVIITQLQPITAIFSIPEDNIPKVLQQLQSGRKLPAQAWDREQK 240 Query: 293 NKLADGVLLTIDNVVDATTGTVKLKAQFPNTDYALFPSQFVNIRLQLNTEQGATVIPTAA 352 NKLADGVLLTIDNVVDATTGTVKLKAQFPNTDYALFPSQFVNIRLQLNTEQGATVIPTAA Sbjct: 241 NKLADGVLLTIDNVVDATTGTVKLKAQFPNTDYALFPSQFVNIRLQLNTEQGATVIPTAA 300 Query: 353 IQRGSKGLFVYVVKDDSSVTVRPVKTGPVQDDLTVITDGVSAGETVVIDGIDRLREGAKV 412 IQRGSKGLFVYVVKDDSSVTVRPVKTGPVQDDLTVITDGVSAGETVVIDGIDRLREGAKV Sbjct: 301 IQRGSKGLFVYVVKDDSSVTVRPVKTGPVQDDLTVITDGVSAGETVVIDGIDRLREGAKV 360 Query: 413 EAVARGGADDPANKLTIENPERRHGKRGQGNPGAQAGAGGDAGQGAQGGMSPEERQKRWA 472 EAVARGGADDPANKLT ENPERRHGKRGQGNPGAQAGAGGDAGQGAQGGMSPEERQKRWA Sbjct: 361 EAVARGGADDPANKLTTENPERRHGKRGQGNPGAQAGAGGDAGQGAQGGMSPEERQKRWA 420 Query: 473 ELNKRIDAGEFGEEIKKLPEDQRRQKMMELRRQREAAGNGN 513 ELNKRIDAGEFGEEIKKLPEDQRRQKMMELRRQREAAGNGN Sbjct: 421 ELNKRIDAGEFGEEIKKLPEDQRRQKMMELRRQREAAGNGN 461 >ref|YP_004751840.1| putative resistance transmembrane protein [Collimonas fungivorans Ter331] gb|AEK61017.1| putative resistance transmembrane protein [Collimonas fungivorans Ter331] Length = 488 Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust. Identities = 252/393 (64%), Positives = 306/393 (77%), Gaps = 27/393 (6%) Query: 40 YKMWSKKKAEQEQMAAMGGPGGRPGPGA---------------AGARRPGGPGAFGSQTM 84 Y +W + + Q AA G PG PG A AGA GGP + Sbjct: 45 YLIWGR--SHQSGDAAGGQPGAMPGQAANGGGKGGKGGRRGAFAGA---GGP-------L 92 Query: 85 PVGVAKARLQDVNVFLNGLGAVTPTATATVRARVDGQLMKLHYKEGQVVKAGDLLAEIDP 144 PVGVA A+ D+ ++L+GLG+VTP ATATV++RV+GQLMKLH+KEGQVVKAGDLLAE+DP Sbjct: 93 PVGVAVAKTGDIRIYLSGLGSVTPEATATVKSRVNGQLMKLHFKEGQVVKAGDLLAELDP 152 Query: 145 RSLQAALTQAEGQLARDRALLASARLDLKRYQTLLAQDSIASQQVDTQAALVKQYEGTVK 204 R Q A+TQAEGQL RD ALL +A++DL+RY+TLLAQDSIASQQVDTQAALVKQYEGTV+ Sbjct: 153 RPYQVAVTQAEGQLIRDTALLKAAQIDLQRYRTLLAQDSIASQQVDTQAALVKQYEGTVR 212 Query: 205 ADEGNVASARLQLSFTRVTAPISGRLGLRQADVGNNVTTSDTNGLVIITQLQPITAIFSI 264 +D+G + SARLQL+++RVTAPI GR+GLRQ D+GN V +SDTNG+ IITQLQPIT++FSI Sbjct: 213 SDQGALDSARLQLTYSRVTAPIGGRIGLRQVDLGNIVQSSDTNGIAIITQLQPITSVFSI 272 Query: 265 PEDNIPKVLQQLQSGRKLPAQAWDREQKNKLADGVLLTIDNVVDATTGTVKLKAQFPNTD 324 PEDNIP V++Q+Q+G+KL WDR+QKNKL G LLTIDN VD+TTGTVKLKA+FPN Sbjct: 273 PEDNIPSVMKQIQAGKKLATDVWDRDQKNKLDSGTLLTIDNQVDSTTGTVKLKAEFPNAG 332 Query: 325 YALFPSQFVNIRLQLNTEQGATVIPTAAIQRGSKGLFVYVVKDDSSVTVRPVKTGPVQDD 384 YALFPSQFVN+R+ L+T + ATVIP AAIQRGS G FVYVVK D +VT+R V GPV+ + Sbjct: 333 YALFPSQFVNVRMLLDTRRDATVIPNAAIQRGSSGNFVYVVKPDHTVTIRLVTAGPVEGE 392 Query: 385 LTVITDGVSAGETVVIDGIDRLREGAKVEAVAR 417 T I G++ GETVVIDGID+L+EGAKVE V R Sbjct: 393 STAIDKGIAVGETVVIDGIDKLKEGAKVEPVTR 425 >ref|YP_001892710.1| efflux transporter, RND family, MFP subunit [Ralstonia pickettii 12J] ref|YP_002984211.1| RND family efflux transporter MFP subunit [Ralstonia pickettii 12D] gb|ACD29283.1| efflux transporter, RND family, MFP subunit [Ralstonia pickettii 12J] gb|ACS65539.1| efflux transporter, RND family, MFP subunit [Ralstonia pickettii 12D] Length = 462 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 222/412 (53%), Positives = 287/412 (69%), Gaps = 14/412 (3%) Query: 4 TPNPHPPSPSNASARGSILRRWWFWVLVAALAAGGGYKMWSKKKAEQEQMAAMGGPGGRP 63 TPN P+ G RRW WV++ L G Y ++ K + Sbjct: 25 TPNEVSPTLLPPPREGGKRRRWGIWVVITLLVLIG-YAVYHAKYRDAGGPGGR------- 76 Query: 64 GPGAAGARRPGGPGAFGSQTMPVGVAKARLQDVNVFLNGLGAVTPTATATVRARVDGQLM 123 G A + MPV V A D+NV L+ LG VTP TV+ RVDGQL+ Sbjct: 77 ------GGAGGRGAAMAGKPMPVMVGTAIKGDINVVLSALGNVTPVNNVTVKTRVDGQLV 130 Query: 124 KLHYKEGQVVKAGDLLAEIDPRSLQAALTQAEGQLARDRALLASARLDLKRYQTLLAQDS 183 +L + EGQ VKAGDLLAE+DPR+ QA L QAEGQLARD+ALL +A+LDL+RYQTLL+QDS Sbjct: 131 RLAFTEGQTVKAGDLLAEVDPRTYQAQLAQAEGQLARDQALLHNAKLDLQRYQTLLSQDS 190 Query: 184 IASQQVDTQAALVKQYEGTVKADEGNVASARLQLSFTRVTAPISGRLGLRQADVGNNVTT 243 I+ QQVDTQAALV+QY+GTVK D+GNV +AR+QLS+TR+TAP+SGR+GLRQ D GN V Sbjct: 191 ISKQQVDTQAALVRQYDGTVKLDQGNVDNARVQLSYTRITAPVSGRVGLRQVDPGNIVHA 250 Query: 244 SDTNGLVIITQLQPITAIFSIPEDNIPKVLQQLQSGRKLPAQAWDREQKNKLADGVLLTI 303 SDTNG+V+ITQ+ PIT I+SIPEDN+PKV+ +LQSG KLP +AWDR Q +LA GVL+T+ Sbjct: 251 SDTNGIVVITQIDPITVIYSIPEDNLPKVMPRLQSGDKLPVEAWDRGQTTQLARGVLMTV 310 Query: 304 DNVVDATTGTVKLKAQFPNTDYALFPSQFVNIRLQLNTEQGATVIPTAAIQRGSKGLFVY 363 DN +D TTGTVKL+AQFPN + LFP+QFVN+R++++T + ++P AAIQRG++G FVY Sbjct: 311 DNTIDNTTGTVKLRAQFPNQNAMLFPNQFVNVRMRVDTLRDVVIVPGAAIQRGTQGTFVY 370 Query: 364 VVKDDSSVTVRPVKTGPVQDDLTVITDGVSAGETVVIDGIDRLREGAKVEAV 415 VV D++ V +R VK G + D + G+ GE VVIDG D+LR+G+ VE + Sbjct: 371 VVGDNNKVALRLVKLGVTEGDRVSVAQGLQPGERVVIDGADKLRDGSPVEVI 422 >ref|YP_003750180.1| multidrug efflux system, subunit a [Ralstonia solanacearum PSI07] emb|CBJ35558.1| multidrug efflux system, subunit A [Ralstonia solanacearum PSI07] Length = 450 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 218/377 (57%), Positives = 278/377 (73%), Gaps = 15/377 (3%) Query: 39 GYKMWSKKKAEQEQMAAMGGPGGRPGPGAAGARRPGGPGAFGSQTMPVGVAKARLQDVNV 98 GY ++ ++ A+ GGPGGR GAA + +P MPV VA A D+NV Sbjct: 48 GYVIF--HTVQRSTGASKGGPGGR---GAAMSGKP----------MPVMVATAAKGDINV 92 Query: 99 FLNGLGAVTPTATATVRARVDGQLMKLHYKEGQVVKAGDLLAEIDPRSLQAALTQAEGQL 158 L LG VTP TV+ RVDGQL++L + EGQ VKAGDLLAEIDPR+ QA L QAEGQL Sbjct: 93 VLTALGNVTPVNNVTVKTRVDGQLVRLAFTEGQTVKAGDLLAEIDPRAYQAQLAQAEGQL 152 Query: 159 ARDRALLASARLDLKRYQTLLAQDSIASQQVDTQAALVKQYEGTVKADEGNVASARLQLS 218 ARD ALL +ARLDL+RYQTL+AQDSIA QQVDTQA+LV+QYEGTVK D+GN +AR+QLS Sbjct: 153 ARDTALLQNARLDLQRYQTLMAQDSIAKQQVDTQASLVRQYEGTVKLDQGNADNARVQLS 212 Query: 219 FTRVTAPISGRLGLRQADVGNNVTTSDTNGLVIITQLQPITAIFSIPEDNIPKVLQQLQS 278 +TR+TAP+SGR+GLRQ D GN V SDT G+V+ITQ+ PIT I+++PED +PKV+ +LQ+ Sbjct: 213 YTRITAPVSGRVGLRQVDPGNIVHASDTTGIVVITQIDPITVIYTLPEDTLPKVMPRLQA 272 Query: 279 GRKLPAQAWDREQKNKLADGVLLTIDNVVDATTGTVKLKAQFPNTDYALFPSQFVNIRLQ 338 G KLP +AWDR Q N LA G L+T+DN +D TTGTVKL+AQFPN + ALFP+QFVN+R++ Sbjct: 273 GDKLPVEAWDRGQTNLLAHGTLMTVDNTIDNTTGTVKLRAQFPNQNAALFPNQFVNVRMR 332 Query: 339 LNTEQGATVIPTAAIQRGSKGLFVYVVKDDSSVTVRPVKTGPVQDDLTVITDGVSAGETV 398 ++T ++P AAIQRG++G F YVV D +V +R VK G + D I G++ GE V Sbjct: 333 VDTLHDQVILPGAAIQRGTQGTFAYVVGADGNVALRTVKLGVTEGDRVSIAQGLNPGERV 392 Query: 399 VIDGIDRLREGAKVEAV 415 VIDG D+LR+G+ VE + Sbjct: 393 VIDGADKLRDGSPVEVI 409 >ref|ZP_07673605.1| multidrug RND efflux transporter, membrane fusion protein MdtA [Ralstonia sp. 5_7_47FAA] gb|EFP67984.1| multidrug RND efflux transporter, membrane fusion protein MdtA [Ralstonia sp. 5_7_47FAA] Length = 462 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 224/411 (54%), Positives = 292/411 (71%), Gaps = 16/411 (3%) Query: 7 PHPPSPSNASA--RGSILRRWWFWVLVAALAAGGGYKMWSKKKAEQEQMAAMGGPGGRPG 64 PH SP+ G RRW W+++ L ++ A+ G GG G Sbjct: 26 PHEVSPTLLPPPREGGKRRRWGIWLVIVLLV----LICYAVYHAKYRNAGGPGSSGGPGG 81 Query: 65 PGAAGARRPGGPGAFGSQTMPVGVAKARLQDVNVFLNGLGAVTPTATATVRARVDGQLMK 124 GA+ A +P MPV V A D+NV L+ LG VTP TV+ RVDGQL++ Sbjct: 82 RGASMANKP----------MPVMVGTAVKGDINVVLSALGNVTPVNNVTVKTRVDGQLVR 131 Query: 125 LHYKEGQVVKAGDLLAEIDPRSLQAALTQAEGQLARDRALLASARLDLKRYQTLLAQDSI 184 L + EGQ VKAGDLLAE+DPR+ QA L QAEGQLARD+ALL +A+LDL+RYQTLL+QDSI Sbjct: 132 LAFTEGQTVKAGDLLAEVDPRTYQAQLAQAEGQLARDQALLQNAKLDLQRYQTLLSQDSI 191 Query: 185 ASQQVDTQAALVKQYEGTVKADEGNVASARLQLSFTRVTAPISGRLGLRQADVGNNVTTS 244 + QQVDTQAALV+QY+GTVK D+GNV +AR+QLS+TR+TAP+SGR+GLRQ D GN V S Sbjct: 192 SKQQVDTQAALVRQYDGTVKLDQGNVDNARVQLSYTRITAPVSGRVGLRQVDPGNIVHAS 251 Query: 245 DTNGLVIITQLQPITAIFSIPEDNIPKVLQQLQSGRKLPAQAWDREQKNKLADGVLLTID 304 DTNG+V+ITQ+ PIT I+SIPEDN+PKV+ +LQSG KLP +AWDR Q +LA GVL+T+D Sbjct: 252 DTNGIVVITQIDPITVIYSIPEDNLPKVMPRLQSGDKLPVEAWDRGQTTQLARGVLMTVD 311 Query: 305 NVVDATTGTVKLKAQFPNTDYALFPSQFVNIRLQLNTEQGATVIPTAAIQRGSKGLFVYV 364 N +D TTGTVKL+AQFPN + LFP+QFVN+R++++T + ++P AAIQRG++G FVYV Sbjct: 312 NTIDNTTGTVKLRAQFPNQNAMLFPNQFVNVRMRVDTLRDVVIVPGAAIQRGTQGTFVYV 371 Query: 365 VKDDSSVTVRPVKTGPVQDDLTVITDGVSAGETVVIDGIDRLREGAKVEAV 415 V +D+ V +R VK G + + + G+ GE VVIDG D+LR+G+ VE + Sbjct: 372 VGEDNKVALRLVKLGVTEGERVSVAQGLQPGERVVIDGADKLRDGSPVEVI 422 >ref|ZP_00942675.1| Acriflavin resistance periplasmic protein [Ralstonia solanacearum UW551] ref|YP_002257917.1| membrane fusion protein [Ralstonia solanacearum IPO1609] gb|EAP74814.1| Acriflavin resistance periplasmic protein [Ralstonia solanacearum UW551] emb|CAQ37049.1| membrane fusion protein [Ralstonia solanacearum MolK2] emb|CAQ59810.1| membrane fusion protein [Ralstonia solanacearum IPO1609] Length = 445 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 221/405 (54%), Positives = 281/405 (69%), Gaps = 16/405 (3%) Query: 11 SPSNASARGSILRRWWFWVLVAALAAGGGYKMWSKKKAEQEQMAAMGGPGGRPGPGAAGA 70 SP+ R RRW WV + LA G + +++ GG G Sbjct: 20 SPTLLPPRAGQPRRWILWVALVVLALIGYAVFHTVQRSTGAGKGGPGGRGA--------- 70 Query: 71 RRPGGPGAFGSQTMPVGVAKARLQDVNVFLNGLGAVTPTATATVRARVDGQLMKLHYKEG 130 A + MPV VA A D+NV L LG VTP TV+ RVDGQL++L + EG Sbjct: 71 -------AMAGKPMPVMVATAAKGDINVVLTALGNVTPVNNVTVKTRVDGQLVRLAFTEG 123 Query: 131 QVVKAGDLLAEIDPRSLQAALTQAEGQLARDRALLASARLDLKRYQTLLAQDSIASQQVD 190 Q VKAGDLLAEIDPR+ QA L QAEGQLARD ALL +ARLDL+RYQTL+AQDSIA QQVD Sbjct: 124 QTVKAGDLLAEIDPRAYQAQLAQAEGQLARDTALLQNARLDLQRYQTLMAQDSIAKQQVD 183 Query: 191 TQAALVKQYEGTVKADEGNVASARLQLSFTRVTAPISGRLGLRQADVGNNVTTSDTNGLV 250 TQA+LV+QYEGTVK D+GN +AR+QLS+TR+TAP+SGR+GLRQ D GN V SDT G+V Sbjct: 184 TQASLVRQYEGTVKLDQGNADNARVQLSYTRITAPVSGRVGLRQVDPGNIVHASDTTGIV 243 Query: 251 IITQLQPITAIFSIPEDNIPKVLQQLQSGRKLPAQAWDREQKNKLADGVLLTIDNVVDAT 310 +ITQ+ PIT I+++PED +PKV+ +LQ+G KLP +AWDR Q N LA G L+T+DN +D T Sbjct: 244 VITQIDPITVIYTLPEDTLPKVMPRLQAGDKLPVEAWDRGQTNLLAHGTLMTVDNTIDNT 303 Query: 311 TGTVKLKAQFPNTDYALFPSQFVNIRLQLNTEQGATVIPTAAIQRGSKGLFVYVVKDDSS 370 TGTVKL+AQFPN + ALFP+QFVN+R++++T ++P AAIQRG++G FVY V D + Sbjct: 304 TGTVKLRAQFPNQNAALFPNQFVNVRMRVDTLHDQVILPGAAIQRGTQGTFVYAVGADGN 363 Query: 371 VTVRPVKTGPVQDDLTVITDGVSAGETVVIDGIDRLREGAKVEAV 415 V +R VK G + D IT G++ GE VVIDG D+LR+G+ VE + Sbjct: 364 VALRTVKLGVTEGDRVSITQGLNPGERVVIDGADKLRDGSPVEVI 408 >gb|AEG71461.1| multidrug efflux system, subunit a [Ralstonia solanacearum Po82] Length = 445 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 228/432 (52%), Positives = 289/432 (66%), Gaps = 21/432 (4%) Query: 11 SPSNASARGSILRRWWFWVLVAALAAGGGYKMWSKKKAEQEQMAAMGGPGGRPGPGAAGA 70 SP+ R RRW WV + LA G + +++ GG G Sbjct: 20 SPTLLPPRAGKPRRWILWVALVVLALIGYAVFHAVQRSTGAGKGGPGGRGA--------- 70 Query: 71 RRPGGPGAFGSQTMPVGVAKARLQDVNVFLNGLGAVTPTATATVRARVDGQLMKLHYKEG 130 A + MPV VA A D+NV L LG VTP TV+ RVDGQL++L + EG Sbjct: 71 -------AMAGKPMPVMVATAAKGDINVVLTALGNVTPVNNVTVKTRVDGQLVRLAFTEG 123 Query: 131 QVVKAGDLLAEIDPRSLQAALTQAEGQLARDRALLASARLDLKRYQTLLAQDSIASQQVD 190 Q VKAGDLLAEIDPR+ QA L QAEGQLARD ALL +ARLDL+RYQTL+AQDSIA QQVD Sbjct: 124 QTVKAGDLLAEIDPRAYQAQLAQAEGQLARDSALLQNARLDLQRYQTLMAQDSIAKQQVD 183 Query: 191 TQAALVKQYEGTVKADEGNVASARLQLSFTRVTAPISGRLGLRQADVGNNVTTSDTNGLV 250 TQA+LV+QYEGTVK D+GN +AR+QLS+TR+TAP+SGR+GLRQ D GN V SDT G+V Sbjct: 184 TQASLVRQYEGTVKLDQGNADNARVQLSYTRITAPVSGRVGLRQVDPGNIVHASDTTGIV 243 Query: 251 IITQLQPITAIFSIPEDNIPKVLQQLQSGRKLPAQAWDREQKNKLADGVLLTIDNVVDAT 310 +ITQ+ PIT I+++PED +PKV+ +LQ+G KLP +AWDR Q N LA G L+T+DN +D T Sbjct: 244 VITQIDPITVIYTLPEDTLPKVMPRLQAGDKLPVEAWDRGQTNLLAHGTLMTVDNTIDNT 303 Query: 311 TGTVKLKAQFPNTDYALFPSQFVNIRLQLNTEQGATVIPTAAIQRGSKGLFVYVVKDDSS 370 TGTVKL+AQFPN + ALFP+QFVN+R++++T ++P AAIQRG++G FVY V D + Sbjct: 304 TGTVKLRAQFPNQNAALFPNQFVNVRMRVDTLHDQVILPGAAIQRGTQGTFVYAVGADGN 363 Query: 371 VTVRPVKTGPVQDDLTVITDGVSAGETVVIDGIDRLREGAKVEAVA--RGGADDPAN--- 425 V +R VK G + D I G++ GE VVIDG D+LR+G+ VE + G A PA Sbjct: 364 VALRIVKLGATEGDRVSIAQGLNPGERVVIDGADKLRDGSPVEVIQPDAGPASAPATAQG 423 Query: 426 KLTIENPERRHG 437 + RRHG Sbjct: 424 SHGAQGGHRRHG 435 >emb|CBJ40875.1| multidrug efflux system, subunit A [Ralstonia solanacearum CMR15] Length = 449 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 207/335 (61%), Positives = 260/335 (77%) Query: 84 MPVGVAKARLQDVNVFLNGLGAVTPTATATVRARVDGQLMKLHYKEGQVVKAGDLLAEID 143 MPV VA + D+NV L LG VTP TV+ RVDGQL++L + EGQ VKAGDLLAEID Sbjct: 79 MPVMVATSGKGDINVVLTALGNVTPVNNVTVKTRVDGQLVRLAFTEGQTVKAGDLLAEID 138 Query: 144 PRSLQAALTQAEGQLARDRALLASARLDLKRYQTLLAQDSIASQQVDTQAALVKQYEGTV 203 PR+ QA L QAEGQLARD ALL +ARLDL+RYQTL+AQDSIA QQVDTQA+LV+QYEGTV Sbjct: 139 PRAYQAQLAQAEGQLARDTALLQNARLDLQRYQTLMAQDSIAKQQVDTQASLVRQYEGTV 198 Query: 204 KADEGNVASARLQLSFTRVTAPISGRLGLRQADVGNNVTTSDTNGLVIITQLQPITAIFS 263 K D+GN +AR+QLS+TR+TAP+SGR+GLRQ D GN V TSDT GLV+ITQ+ PIT I++ Sbjct: 199 KLDQGNADNARVQLSYTRITAPVSGRVGLRQVDPGNIVHTSDTTGLVVITQIDPITVIYT 258 Query: 264 IPEDNIPKVLQQLQSGRKLPAQAWDREQKNKLADGVLLTIDNVVDATTGTVKLKAQFPNT 323 +PED +PKV+ +LQ+G KLP +AWDR Q N LA G L+T+DN +D TTGTVKL+AQFPN Sbjct: 259 LPEDTLPKVMPRLQAGDKLPVEAWDRGQTNLLAHGTLMTVDNTIDNTTGTVKLRAQFPNQ 318 Query: 324 DYALFPSQFVNIRLQLNTEQGATVIPTAAIQRGSKGLFVYVVKDDSSVTVRPVKTGPVQD 383 + ALFP+QFVN+R++++T ++P AAIQRG++G FVYVV D +V +R V G + Sbjct: 319 NAALFPNQFVNVRMRIDTLHDQVILPGAAIQRGTQGTFVYVVGADGNVALRTVTLGVTEG 378 Query: 384 DLTVITDGVSAGETVVIDGIDRLREGAKVEAVARG 418 D I G++ GE VVIDG D+LR+G+ VE + G Sbjct: 379 DRVSIARGLNPGERVVIDGADKLRDGSPVEVIQPG 413 >ref|NP_522758.1| putative resistance transmembrane protein [Ralstonia solanacearum GMI1000] emb|CAD18348.1| putative membrane fusion protein [Ralstonia solanacearum GMI1000] Length = 449 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 206/335 (61%), Positives = 260/335 (77%) Query: 84 MPVGVAKARLQDVNVFLNGLGAVTPTATATVRARVDGQLMKLHYKEGQVVKAGDLLAEID 143 MPV VA + D+NV L LG VTP TV+ RVDGQL++L + EGQ VKAGDLLAEID Sbjct: 79 MPVMVATSGKGDINVVLTALGNVTPVNNVTVKTRVDGQLVRLAFTEGQTVKAGDLLAEID 138 Query: 144 PRSLQAALTQAEGQLARDRALLASARLDLKRYQTLLAQDSIASQQVDTQAALVKQYEGTV 203 PR+ QA L QAEGQLARD ALL +ARLDL+RYQTL+AQDSIA QQVDTQA+LV+QYEGTV Sbjct: 139 PRAYQAQLAQAEGQLARDTALLQNARLDLQRYQTLMAQDSIAKQQVDTQASLVRQYEGTV 198 Query: 204 KADEGNVASARLQLSFTRVTAPISGRLGLRQADVGNNVTTSDTNGLVIITQLQPITAIFS 263 K D+GN +AR+QLS+TR+TAP+SGR+GLRQ D GN V TSDT G+V+ITQ+ PIT I++ Sbjct: 199 KLDQGNADNARVQLSYTRITAPVSGRVGLRQVDPGNIVHTSDTTGIVVITQIDPITVIYT 258 Query: 264 IPEDNIPKVLQQLQSGRKLPAQAWDREQKNKLADGVLLTIDNVVDATTGTVKLKAQFPNT 323 +PED +PKV+ +LQ+G KLP +AWDR Q N LA G L+T+DN +D TTGTVKL+AQFPN Sbjct: 259 LPEDTLPKVMPRLQAGDKLPVEAWDRGQTNLLAHGTLMTVDNTIDNTTGTVKLRAQFPNQ 318 Query: 324 DYALFPSQFVNIRLQLNTEQGATVIPTAAIQRGSKGLFVYVVKDDSSVTVRPVKTGPVQD 383 + ALFP+QFVN+R++++T ++P AAIQRG++G FVYVV D +V +R V G + Sbjct: 319 NAALFPNQFVNVRMRVDTLHDQVILPGAAIQRGTQGTFVYVVGADGNVALRTVTLGVTEG 378 Query: 384 DLTVITDGVSAGETVVIDGIDRLREGAKVEAVARG 418 D I G++ GE VVIDG D+LR+G+ VE + G Sbjct: 379 DRVSIARGLNPGERVVIDGADKLRDGSPVEVIQPG 413 >ref|YP_003748492.1| multidrug efflux system, subunit A [Ralstonia solanacearum CFBP2957] emb|CBJ54106.1| multidrug efflux system, subunit A [Ralstonia solanacearum CFBP2957] Length = 445 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 223/408 (54%), Positives = 283/408 (69%), Gaps = 16/408 (3%) Query: 11 SPSNASARGSILRRWWFWVLVAALAAGGGYKMWSKKKAEQEQMAAMGGPGGRPGPGAAGA 70 SP+ R RRW WV + LA G + +++ GG G AA A Sbjct: 20 SPTLLPPRAGKPRRWILWVALVVLALIGYAVFHAVQRSTGAGKGGPGGRG------AAMA 73 Query: 71 RRPGGPGAFGSQTMPVGVAKARLQDVNVFLNGLGAVTPTATATVRARVDGQLMKLHYKEG 130 +P MPV VA A D+NV L LG VTP TV+ RVDGQL++L + EG Sbjct: 74 GKP----------MPVMVATAAKGDINVVLTALGNVTPVNNVTVKTRVDGQLVRLAFTEG 123 Query: 131 QVVKAGDLLAEIDPRSLQAALTQAEGQLARDRALLASARLDLKRYQTLLAQDSIASQQVD 190 Q VKAGDLLAEIDPR+ QA L QAEGQLARD ALL +ARLDL+RYQTL+AQDSIA QQVD Sbjct: 124 QTVKAGDLLAEIDPRAYQAQLAQAEGQLARDTALLQNARLDLQRYQTLMAQDSIAKQQVD 183 Query: 191 TQAALVKQYEGTVKADEGNVASARLQLSFTRVTAPISGRLGLRQADVGNNVTTSDTNGLV 250 TQA+LV+QYEGTVK D+GN +AR+QLS+TR+TAP+SGR+GLRQ D GN V SDT G+V Sbjct: 184 TQASLVRQYEGTVKLDQGNADNARVQLSYTRITAPVSGRVGLRQVDPGNIVHASDTTGIV 243 Query: 251 IITQLQPITAIFSIPEDNIPKVLQQLQSGRKLPAQAWDREQKNKLADGVLLTIDNVVDAT 310 +ITQ+ PIT I+++PED +P V+ +LQ+G KLP +AWDR Q N LA G L+T+DN +D T Sbjct: 244 VITQIDPITVIYTLPEDTLPNVMPRLQAGDKLPVEAWDRGQTNLLAHGTLMTVDNTIDNT 303 Query: 311 TGTVKLKAQFPNTDYALFPSQFVNIRLQLNTEQGATVIPTAAIQRGSKGLFVYVVKDDSS 370 TGTVKL+AQFPN + ALFP+QFVN+R++++T ++P AAIQRG++G FVY V D + Sbjct: 304 TGTVKLRAQFPNQNAALFPNQFVNVRMRVDTLHDQVILPGAAIQRGTQGTFVYAVGADGN 363 Query: 371 VTVRPVKTGPVQDDLTVITDGVSAGETVVIDGIDRLREGAKVEAVARG 418 V +R VK G + D I G++ GE VVIDG D+LR+G+ VE + G Sbjct: 364 VALRTVKLGVTEGDRVSIAQGLNPGERVVIDGADKLRDGSPVEVIQPG 411