BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0059.p (179 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774942.1| hypothetical protein Hsero_1519 [Herbaspiril... 363 6e-99 ref|YP_003523113.1| hypothetical protein Slit_0485 [Sideroxydans... 98 6e-19 emb|CBA30556.1| hypothetical protein Csp_C24140 [Curvibacter put... 86 2e-15 ref|YP_284605.1| hypothetical protein Daro_1386 [Dechloromonas a... 83 2e-14 ref|YP_521304.1| hypothetical protein Rfer_0011 [Rhodoferax ferr... 81 5e-14 ref|YP_980264.1| hypothetical protein Pnap_0017 [Polaromonas nap... 80 1e-13 ref|ZP_04579845.1| conserved hypothetical protein [Oxalobacter f... 79 4e-13 ref|YP_004152349.1| hypothetical protein Varpa_0015 [Variovorax ... 78 5e-13 ref|ZP_04577687.1| predicted protein [Oxalobacter formigenes HOx... 77 1e-12 ref|YP_002941944.1| hypothetical protein Vapar_0015 [Variovorax ... 77 1e-12 >ref|YP_003774942.1| hypothetical protein Hsero_1519 [Herbaspirillum seropedicae SmR1] gb|ADJ63034.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 179 Score = 363 bits (932), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 177/179 (98%), Positives = 178/179 (99%) Query: 1 MLTIKNRILSGIAAVSISAVTLSAFAQIPPGGPQGHPPSPEQVAKFEQMRAKHQAELHDK 60 MLTIKNRILSGIAAVSISAVTLSAFAQ+PPGGPQGHPPSPEQVAKFEQMRAKHQAELHDK Sbjct: 1 MLTIKNRILSGIAAVSISAVTLSAFAQMPPGGPQGHPPSPEQVAKFEQMRAKHQAELHDK 60 Query: 61 LKITASQEAAWKLFLDKTKPAPFDQASRPNKDEWAKLSTPERLDKQLDMMRKREAFAEQR 120 LKITASQEAAWKLFLDKTKPAPFDQA RPNKDEWAKLSTPERLDKQLDMMRKREAFAEQR Sbjct: 61 LKITASQEAAWKLFLDKTKPAPFDQAGRPNKDEWAKLSTPERLDKQLDMMRKREAFAEQR 120 Query: 121 IAATKDFYATLSPQQQKIFDAEHAKMERHRWEKMEHMRRGDRKGPPHDGNPAPVAPPAN 179 IAATKDFYATLSPQQQKIFDAEHAKMERHRWEKMEHMRRGDRKGPPHDGNPAPVAPPAN Sbjct: 121 IAATKDFYATLSPQQQKIFDAEHAKMERHRWEKMEHMRRGDRKGPPHDGNPAPVAPPAN 179 >ref|YP_003523113.1| hypothetical protein Slit_0485 [Sideroxydans lithotrophicus ES-1] gb|ADE10726.1| protein of unknown function DUF1520 [Sideroxydans lithotrophicus ES-1] Length = 154 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 88/157 (56%), Gaps = 14/157 (8%) Query: 3 TIKNRILSGIAAVSISAVTLSAFA------QIPPGGPQGHPPSPEQVAKFEQMRAKHQAE 56 T+ + +A V+I A++ SAFA + G G P + EQ R +H + Sbjct: 4 TVNKSVSMLLAGVAIVAMSASAFARGGEDCEYREHGRMGMNPE-----RMEQYREQHLTK 58 Query: 57 LHDKLKITASQEAAWKLFLDKTKPAPFDQASRPNKDEWAKLSTPERLDKQLDMMRKREAF 116 LHDKLK+T QE AWK + + D++ RP+ DE AKL+ P+RL+K L+ MR EA Sbjct: 59 LHDKLKLTPQQETAWKKY--AAQQPVLDKSMRPDPDEMAKLNAPQRLEKGLERMRAMEAR 116 Query: 117 AEQRIAATKDFYATLSPQQQKIFDAEHAKMERHRWEK 153 +AA K+FYA L+P+QQK FD + + RWE+ Sbjct: 117 MSDHLAALKEFYAVLTPEQQKTFDDQMPRFG-ARWER 152 >emb|CBA30556.1| hypothetical protein Csp_C24140 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 141 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/115 (46%), Positives = 66/115 (57%), Gaps = 4/115 (3%) Query: 44 AKFEQMRAKHQAELHDKLKITASQEAAWKLFLDKTKPAPFDQASRPNKDEWAKLSTPERL 103 AK E+M AK AEL KLKITA+QEA W F + KP ++ E AKL TPERL Sbjct: 24 AKMEEMHAKRSAELKAKLKITAAQEANWTAFSNSMKPPAPQTKPATDRAELAKLPTPERL 83 Query: 104 DK----QLDMMRKREAFAEQRIAATKDFYATLSPQQQKIFDAEHAKMERHRWEKM 154 DK + + M R A EQR A K FY TL+ +Q+K+FD E A M+ H M Sbjct: 84 DKIKALRTEHMAARTAQMEQRDQAVKTFYGTLTAEQKKVFDTEFANMKGHHGGGM 138 >ref|YP_284605.1| hypothetical protein Daro_1386 [Dechloromonas aromatica RCB] gb|AAZ46135.1| hypothetical protein Daro_1386 [Dechloromonas aromatica RCB] Length = 267 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/97 (45%), Positives = 62/97 (63%), Gaps = 2/97 (2%) Query: 48 QMRAKHQAELHDKLKITASQEAAWKLFLDKTKPAPFDQASRPNKDEWAKLSTPERLDKQL 107 +M +H +LH+ LK+TA QE AWK +D +P Q P +D WAKL+ PER +K L Sbjct: 149 KMMEQHHTQLHEALKLTAEQEPAWKKLMDSEQPRTAAQGG-PAED-WAKLNAPERAEKML 206 Query: 108 DMMRKREAFAEQRIAATKDFYATLSPQQQKIFDAEHA 144 ++ + R+A +AA K FYA L+P+QQKIF+ HA Sbjct: 207 ELSKARQAQMTDHVAALKAFYAALTPEQQKIFEDFHA 243 >ref|YP_521304.1| hypothetical protein Rfer_0011 [Rhodoferax ferrireducens T118] gb|ABD67773.1| conserved hypothetical protein [Rhodoferax ferrireducens T118] Length = 181 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 65/179 (36%), Positives = 89/179 (49%), Gaps = 25/179 (13%) Query: 12 IAAVSISAVTLSAFAQIPPGG-----PQGHPPSP---EQVAKFE--QMRAK---HQAELH 58 + A ++ +AF+Q+P G QG E++ KF+ +M+A+ A L Sbjct: 9 LIASLLATAGFAAFSQVPAAGQDCMMGQGAMYGGMHHERMGKFDPAKMQARMDQRSAALK 68 Query: 59 DKLKITASQEAAWKLFLDKTKPAPFDQASRPNKDEWAKLSTPERLDKQLDMMRKR----E 114 +LK+T +QE AW F KP A+RP+ E KL TPER+DK + +R Sbjct: 69 AQLKLTPAQETAWTTFTAAMKPPAAMMANRPDYAELIKLPTPERIDKMKALHTQRMADMT 128 Query: 115 AFAEQRIAATKDFYATLSPQQQKIFDAEHAKMERHRWEKMEHMRRGDRKGPPHDGNPAP 173 A EQR ATK FYA L+P+QQK+FDA A+ K HM H G PAP Sbjct: 129 AAMEQRGEATKAFYAVLTPEQQKVFDAGTARHFGSVGRKGGHMG--------HMGVPAP 179 >ref|YP_980264.1| hypothetical protein Pnap_0017 [Polaromonas naphthalenivorans CJ2] gb|ABM35343.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2] Length = 189 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/112 (48%), Positives = 63/112 (56%), Gaps = 7/112 (6%) Query: 44 AKFEQMRAKHQAELHDKLKITASQEAAWKLFLDKTKPAPFDQASRPN---KDEWAKLSTP 100 A+ + AKHQAEL KLKIT +QE AW F +P RP + E+ KL+TP Sbjct: 62 AQMQARMAKHQAELKAKLKITPAQEGAWTAFTAAMQPPARMMGQRPTPEQRAEFDKLTTP 121 Query: 101 ERLDKQ--LDMMRKREAFAE--QRIAATKDFYATLSPQQQKIFDAEHAKMER 148 ER+DK L R E AE +R ATK YA LS QQK FDAEH KM R Sbjct: 122 ERIDKMRALRTQRMTEMNAEMDKRGEATKALYAALSLDQQKTFDAEHKKMGR 173 >ref|ZP_04579845.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gb|EEO30818.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 181 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 19/160 (11%) Query: 1 MLTIKNRILSGIAAVSISAVTL--SAFAQIPPGGPQGHP-----PSPEQVAKFEQMRAKH 53 M + +++GIAA+ +S L SA A G G P P P + R H Sbjct: 1 MKILNKCLIAGIAAIGLSGAILGTSAIAAPADSGYDGCPMNMGGPGPGNCYVDQDNRGYH 60 Query: 54 -----------QAELHDKLKITASQEAAWKLFLDKTKPAPFDQASRPNKDEWAKLSTPER 102 Q LHD+LK+ A QE AWK +L A ++ ++ + K++ P+R Sbjct: 61 MERWHHYRQQRQTALHDQLKLNADQEKAWKNYL-AVVDANYNSWKPISRADIEKMTAPQR 119 Query: 103 LDKQLDMMRKREAFAEQRIAATKDFYATLSPQQQKIFDAE 142 + LD M++RE ++AA K FY L+P+QQK FD E Sbjct: 120 MQTMLDRMKEREGKMANQLAALKTFYNKLTPEQQKTFDNE 159 >ref|YP_004152349.1| hypothetical protein Varpa_0015 [Variovorax paradoxus EPS] gb|ADU34238.1| hypothetical protein Varpa_0015 [Variovorax paradoxus EPS] Length = 192 Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 43/102 (42%), Positives = 64/102 (62%) Query: 41 EQVAKFEQMRAKHQAELHDKLKITASQEAAWKLFLDKTKPAPFDQASRPNKDEWAKLSTP 100 +++ + ++ RAK A L DKLK+TA+QE+AW + +P + R ++ E+AKL+TP Sbjct: 62 QRMERMKEHRAKRLAALKDKLKLTAAQESAWTTYTTANQPPAGARPQRMDRAEFAKLTTP 121 Query: 101 ERLDKQLDMMRKREAFAEQRIAATKDFYATLSPQQQKIFDAE 142 ERL++ +R A +R ATK FYA LS Q+K FDAE Sbjct: 122 ERLERMQTRQAERSAMFAKRAEATKTFYAALSADQKKTFDAE 163 >ref|ZP_04577687.1| predicted protein [Oxalobacter formigenes HOxBLS] gb|EEO28649.1| predicted protein [Oxalobacter formigenes HOxBLS] Length = 174 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 79/178 (44%), Gaps = 38/178 (21%) Query: 1 MLTIKNRILSGIAAVSISAVTLSAFAQIPPGGPQGHPPSPEQVA---------------- 44 M + +++G+AA+ SAV S A P G G+ P + Sbjct: 1 MKKLNKYLVAGVAALGFSAVCFSTNALAQPAG-DGYAGCPMYMMGGGPGNCYADHDGSYR 59 Query: 45 ----KFEQMRAKHQAELHDKLKITASQEAAWKLFLDKTKPAPFDQASRPNKDEWA----- 95 ++++ + +A L DKLK+ A QE AW +L S N D W Sbjct: 60 SHHERWKEYHHQRRAALQDKLKLNAEQEKAWTAYL---------AISDKNIDSWKPLYRA 110 Query: 96 ---KLSTPERLDKQLDMMRKREAFAEQRIAATKDFYATLSPQQQKIFDAEHAKMERHR 150 K++ PERL +D M RE ++AA K FYA L+P+QQKIFD+E R R Sbjct: 111 NLEKMTAPERLQAMIDHMNTREKEMSAQLAALKTFYAKLTPEQQKIFDSESMYSPRFR 168 >ref|YP_002941944.1| hypothetical protein Vapar_0015 [Variovorax paradoxus S110] gb|ACS16678.1| protein of unknown function DUF1520 [Variovorax paradoxus S110] Length = 192 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/102 (42%), Positives = 64/102 (62%), Gaps = 2/102 (1%) Query: 41 EQVAKFEQMRAKHQAELHDKLKITASQEAAWKLFLDKTKPAPFDQASRPNKDEWAKLSTP 100 +++ + ++ R K A L +KLK+ A QE+AW F ++P Q R ++ E+AKL+TP Sbjct: 64 QRMERMQEHRTKRLAALKEKLKLNAGQESAWTTFAAASQPPARTQ--RMDRAEFAKLTTP 121 Query: 101 ERLDKQLDMMRKREAFAEQRIAATKDFYATLSPQQQKIFDAE 142 ERL++ +R A +R ATK FYA L+P+QQK FDAE Sbjct: 122 ERLERMQARQAERSARFAKRTEATKAFYAALTPEQQKTFDAE 163