BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0044.p (140 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774928.1| transmembrane protein [Herbaspirillum serope... 278 2e-73 ref|ZP_08273042.1| putative transmembrane protein [Oxalobacterac... 155 3e-36 ref|YP_004751821.1| hypothetical protein CFU_1166 [Collimonas fu... 144 6e-33 ref|YP_001098948.1| hypothetical protein HEAR0622 [Herminiimonas... 132 1e-29 ref|YP_001352280.1| hypothetical protein mma_0590 [Janthinobacte... 128 3e-28 ref|YP_001101062.1| putative transmembrane protein [Herminiimona... 120 5e-26 ref|YP_001354763.1| hypothetical protein mma_3073 [Janthinobacte... 118 4e-25 ref|ZP_04946225.1| Na+/serine symporter [Burkholderia dolosa AUO... 100 9e-20 ref|ZP_03574321.1| conserved hypothetical protein [Burkholderia ... 100 1e-19 gb|EGD02219.1| hypothetical protein B1M_22617 [Burkholderia sp. ... 99 2e-19 >ref|YP_003774928.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ63020.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 140 Score = 278 bits (711), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 139/140 (99%), Positives = 140/140 (100%) Query: 1 MPPASRHKNKTLTTFLATTLGSIGLHRFYLYGARDRFGWLHILAIPLSLGLMAAQPQAPR 60 MPP+SRHKNKTLTTFLATTLGSIGLHRFYLYGARDRFGWLHILAIPLSLGLMAAQPQAPR Sbjct: 1 MPPSSRHKNKTLTTFLATTLGSIGLHRFYLYGARDRFGWLHILAIPLSLGLMAAQPQAPR 60 Query: 61 LFTALPFVLSMLIACLEALVIGLTPDDKWDSRHNAGSGKSSESHWILAVILVLTVGLGAM 120 LFTALPFVLSMLIACLEALVIGLTPDDKWDSRHNAGSGKSSESHWILAVILVLTVGLGAM Sbjct: 61 LFTALPFVLSMLIACLEALVIGLTPDDKWDSRHNAGSGKSSESHWILAVILVLTVGLGAM 120 Query: 121 GVIALLARSFDLLFTGGAFG 140 GVIALLARSFDLLFTGGAFG Sbjct: 121 GVIALLARSFDLLFTGGAFG 140 >ref|ZP_08273042.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33489.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 138 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 79/140 (56%), Positives = 102/140 (72%), Gaps = 2/140 (1%) Query: 1 MPPASRHKNKTLTTFLATTLGSIGLHRFYLYGARDRFGWLHILAIPLSLGLMAAQPQAPR 60 MP SRHKNKT T LAT G IGLHRFYL+GA D++GWLH+ ++P++L ++ Sbjct: 1 MP--SRHKNKTFATLLATVTGGIGLHRFYLHGAADKWGWLHLASVPVTLLVVWLGIGKHG 58 Query: 61 LFTALPFVLSMLIACLEALVIGLTPDDKWDSRHNAGSGKSSESHWILAVILVLTVGLGAM 120 LF A VLS+L+ LEALV+GLTPDD+WD + N SGK + S W LA++LV+T+ +GA Sbjct: 59 LFQAAALVLSVLLGFLEALVLGLTPDDQWDQKFNPQSGKQTASRWWLALLLVITLAIGAT 118 Query: 121 GVIALLARSFDLLFTGGAFG 140 ++A LAR FDLLFTGGAFG Sbjct: 119 ALVATLARGFDLLFTGGAFG 138 >ref|YP_004751821.1| hypothetical protein CFU_1166 [Collimonas fungivorans Ter331] gb|AEK60998.1| putative membrane protein, putative signal peptide [Collimonas fungivorans Ter331] Length = 156 Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 75/136 (55%), Positives = 102/136 (75%), Gaps = 3/136 (2%) Query: 7 HKNKTLTTFLATTLGSIGLHRFYLYGARDRFGWLHILAIPLSL--GLMAAQPQAPRLFTA 64 HKNKTL TF+AT GSIGLHRFYL G +D +GWLH+ +P+SL L Q Q F Sbjct: 22 HKNKTLATFVATVFGSIGLHRFYLKGIKDIWGWLHLATLPISLLAYLFLGQTQQ-TAFLF 80 Query: 65 LPFVLSMLIACLEALVIGLTPDDKWDSRHNAGSGKSSESHWILAVILVLTVGLGAMGVIA 124 P ++S L+AC+E+LVIGLTPD+KWD+++N SG+ S+S W + +++VLT+G GA+ +I Sbjct: 81 GPLIVSGLVACIESLVIGLTPDEKWDAQYNPDSGRKSDSSWFVVLLVVLTLGCGAIALIG 140 Query: 125 LLARSFDLLFTGGAFG 140 +AR+FDLLFTGGA+G Sbjct: 141 AIARTFDLLFTGGAYG 156 >ref|YP_001098948.1| hypothetical protein HEAR0622 [Herminiimonas arsenicoxydans] emb|CAL60821.1| conserved hypothetical protein; putative membrane protein [Herminiimonas arsenicoxydans] Length = 197 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 66/137 (48%), Positives = 93/137 (67%), Gaps = 1/137 (0%) Query: 5 SRHKNKTLTTFLATTLGSIGLHRFYLYGARDRFGWLHILAIP-LSLGLMAAQPQAPRLFT 63 + HKNKT +T LAT GS+G HRFYLYG +D + W+ +L L + +MA PQ + Sbjct: 61 TSHKNKTFSTLLATLFGSLGAHRFYLYGKKDVWAWVAVLIFAALFVVVMAQLPQTLLITF 120 Query: 64 ALPFVLSMLIACLEALVIGLTPDDKWDSRHNAGSGKSSESHWILAVILVLTVGLGAMGVI 123 + F++S + ALVIGLTPD+KWD +HNA SG +S+S W + ++++LT LG+ +I Sbjct: 121 LVLFLISFFAGLIAALVIGLTPDEKWDKQHNAASGYASDSGWAVILLVILTFALGSTALI 180 Query: 124 ALLARSFDLLFTGGAFG 140 A +AR+FDL TGGAFG Sbjct: 181 AAIARAFDLYLTGGAFG 197 >ref|YP_001352280.1| hypothetical protein mma_0590 [Janthinobacterium sp. Marseille] gb|ABR90858.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 116 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 67/140 (47%), Positives = 88/140 (62%), Gaps = 24/140 (17%) Query: 1 MPPASRHKNKTLTTFLATTLGSIGLHRFYLYGARDRFGWLHILAIPLSLGLMAAQPQAPR 60 MP + HKNKTL+T LAT G +GLHRFYLYG +D + W+HI+ P S+ Sbjct: 1 MP--NSHKNKTLSTLLATLFGGLGLHRFYLYGKKDLWAWIHIICFPFSI----------- 47 Query: 61 LFTALPFVLSMLIACLEALVIGLTPDDKWDSRHNAGSGKSSESHWILAVILVLTVGLGAM 120 + ALVIGLTPD+KWD++HNA SG++S+S W + V++VLT LG+ Sbjct: 48 -----------FAGFIGALVIGLTPDEKWDAQHNAHSGRTSDSGWAVIVLVVLTFALGST 96 Query: 121 GVIALLARSFDLLFTGGAFG 140 +IA +AR FDL TGGAFG Sbjct: 97 ALIATIARGFDLYLTGGAFG 116 >ref|YP_001101062.1| putative transmembrane protein [Herminiimonas arsenicoxydans] emb|CAL62941.1| Conserved hypothetical protein; putative membrane protein [Herminiimonas arsenicoxydans] Length = 141 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 65/138 (47%), Positives = 86/138 (62%), Gaps = 2/138 (1%) Query: 5 SRHKNKTLTTFLATTLGSIGLHRFYLYGARDRFGWLHILAIPLSLG--LMAAQPQAPRLF 62 + HKNKTL T LA LG G+HRFYLYG RD + W ++ A L + ++A P + + Sbjct: 4 TSHKNKTLATLLAVVLGGPGIHRFYLYGPRDFWAWNYVAAFLLFVCALVLAQGPHSLGIT 63 Query: 63 TALPFVLSMLIACLEALVIGLTPDDKWDSRHNAGSGKSSESHWILAVILVLTVGLGAMGV 122 F +S+ +EA+VIGLTPD KWD+RHNA S ++S S W L ++LVLT G Sbjct: 64 LLTLFPISIFAGWIEAMVIGLTPDKKWDARHNANSARASASGWPLVLLLVLTFACGFTTF 123 Query: 123 IALLARSFDLLFTGGAFG 140 I +AR+ DL TGGAFG Sbjct: 124 IVCIARATDLFLTGGAFG 141 >ref|YP_001354763.1| hypothetical protein mma_3073 [Janthinobacterium sp. Marseille] gb|ABR90659.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 145 Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 62/139 (44%), Positives = 90/139 (64%), Gaps = 2/139 (1%) Query: 4 ASRHKNKTLTTFLATTLGSIGLHRFYLYGARDRFGWLHILA-IPLSLGLMAAQ-PQAPRL 61 +S+H +KT T LA LG G HRFYLYGA+D + W ++ A + +L L+ AQ P + + Sbjct: 7 SSKHLSKTSATLLAVLLGGTGAHRFYLYGAKDFWAWTYLAAFLIFALALILAQAPHSIAV 66 Query: 62 FTALPFVLSMLIACLEALVIGLTPDDKWDSRHNAGSGKSSESHWILAVILVLTVGLGAMG 121 + F LS+ +EAL IGLTPD+KWD++HNA S + S+S W + +++VLT G Sbjct: 67 SVLVLFPLSIFAGWIEALTIGLTPDEKWDAKHNALSAQQSDSRWSVVILIVLTFACGFTT 126 Query: 122 VIALLARSFDLLFTGGAFG 140 ++ +AR DLL TGGA+G Sbjct: 127 IVIAMARMTDLLLTGGAYG 145 >ref|ZP_04946225.1| Na+/serine symporter [Burkholderia dolosa AUO158] gb|EAY69396.1| Na+/serine symporter [Burkholderia dolosa AUO158] Length = 178 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 64/137 (46%), Positives = 86/137 (62%), Gaps = 5/137 (3%) Query: 3 PASRHKNKTLTTFLATTLGSIGLHRFYLYGARDRFGWLHILA----IPLSLGLMAAQPQA 58 P+ R ++KTLT LA LGS+G HRFYLYG RD +GW H+LA IP L L A Q A Sbjct: 30 PSRRFRSKTLTAALAFLLGSLGAHRFYLYGFRDVYGWAHLLATIVGIPGFLLLAATQRSA 89 Query: 59 P-RLFTALPFVLSMLIACLEALVIGLTPDDKWDSRHNAGSGKSSESHWILAVILVLTVGL 117 + A+P +S+L A L ALV GL PDDKWD++ NA +GK S S W + +++ ++ + Sbjct: 90 ALGWWLAVPGAISLLAAFLAALVYGLRPDDKWDAQFNADTGKRSRSGWTVIFVVIFSLLI 149 Query: 118 GAMGVIALLARSFDLLF 134 GA ++ LA SF F Sbjct: 150 GAFLLMTALALSFQTYF 166 >ref|ZP_03574321.1| conserved hypothetical protein [Burkholderia multivorans CGD2M] ref|ZP_03579278.1| conserved hypothetical protein [Burkholderia multivorans CGD2] ref|ZP_03586518.1| conserved hypothetical protein [Burkholderia multivorans CGD1] gb|EED98805.1| conserved hypothetical protein [Burkholderia multivorans CGD1] gb|EEE06008.1| conserved hypothetical protein [Burkholderia multivorans CGD2] gb|EEE11538.1| conserved hypothetical protein [Burkholderia multivorans CGD2M] Length = 155 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/134 (47%), Positives = 84/134 (62%), Gaps = 5/134 (3%) Query: 6 RHKNKTLTTFLATTLGSIGLHRFYLYGARDRFGWLHILA----IPLSLGLMAAQPQAP-R 60 R ++KTLT LA GS+G HRFYLYG RD FGW HILA IP L L A Q A Sbjct: 10 RFRSKTLTAALAFLFGSLGAHRFYLYGFRDVFGWAHILATLVGIPGFLLLAATQRSATLG 69 Query: 61 LFTALPFVLSMLIACLEALVIGLTPDDKWDSRHNAGSGKSSESHWILAVILVLTVGLGAM 120 + A+P +S+L A L ALV GL PD+KWD++ NAG+GK S S W + +++ ++ +GA Sbjct: 70 WWLAVPGAISLLAAFLAALVYGLRPDEKWDAQFNAGTGKHSRSGWTVIFVVIFSLLIGAF 129 Query: 121 GVIALLARSFDLLF 134 ++ LA SF F Sbjct: 130 LLMTALALSFQTYF 143 >gb|EGD02219.1| hypothetical protein B1M_22617 [Burkholderia sp. TJI49] Length = 155 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/137 (46%), Positives = 86/137 (62%), Gaps = 5/137 (3%) Query: 3 PASRHKNKTLTTFLATTLGSIGLHRFYLYGARDRFGWLHILA----IPLSLGLMAAQPQA 58 P+ R ++KTLT LA LGS+G HRFYLYG RD +GW H+LA IP L L A Q A Sbjct: 7 PSRRFRSKTLTAALAFLLGSLGAHRFYLYGFRDVYGWAHLLATLVGIPGFLLLAATQRSA 66 Query: 59 P-RLFTALPFVLSMLIACLEALVIGLTPDDKWDSRHNAGSGKSSESHWILAVILVLTVGL 117 + A+P +S+L A L ALV GL PD+KWD++ NA +GK S S W + I++ ++ + Sbjct: 67 GLGWWLAVPGAISLLAAFLAALVYGLRPDEKWDAQFNADTGKHSRSGWTVIFIVIFSLLI 126 Query: 118 GAMGVIALLARSFDLLF 134 GA ++ LA SF F Sbjct: 127 GAFLLMTALALSFQTYF 143