BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0030.p         (100 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774914.1| hypothetical protein Hsero_1491 [Herbaspiril...   204   4e-51

>ref|YP_003774914.1| hypothetical protein Hsero_1491 [Herbaspirillum seropedicae SmR1]
 gb|ADJ63006.1| hypothetical protein Hsero_1491 [Herbaspirillum seropedicae SmR1]
          Length = 100

 Score =  204 bits (518), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 100/100 (100%), Positives = 100/100 (100%)

Query: 1   MQSLLAFYAGTNLISFNVTIGYLLANFMCSAFLVVWSEREKAAIMTASFLFSIHIFLSTY 60
           MQSLLAFYAGTNLISFNVTIGYLLANFMCSAFLVVWSEREKAAIMTASFLFSIHIFLSTY
Sbjct: 1   MQSLLAFYAGTNLISFNVTIGYLLANFMCSAFLVVWSEREKAAIMTASFLFSIHIFLSTY 60

Query: 61  CFSSHPLKIAIATGFALFPYLMAAVLFYTRRKAARRQDGK 100
           CFSSHPLKIAIATGFALFPYLMAAVLFYTRRKAARRQDGK
Sbjct: 61  CFSSHPLKIAIATGFALFPYLMAAVLFYTRRKAARRQDGK 100