BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0008.p (332 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774894.1| LysR family transcription regulator protein ... 617 e-175 ref|YP_935361.1| LysR family transcriptional regulator [Azoarcus... 365 8e-99 ref|YP_001563384.1| LysR family transcriptional regulator [Delft... 348 6e-94 ref|YP_004489629.1| LysR family transcriptional regulator [Delft... 347 1e-93 ref|ZP_04562316.1| conserved hypothetical protein [Citrobacter s... 343 2e-92 ref|YP_970444.1| LysR family transcriptional regulator [Acidovor... 342 4e-92 ref|ZP_04764813.1| transcriptional regulator, LysR family [Acido... 342 5e-92 ref|YP_004235537.1| LysR family transcriptional regulator [Acido... 337 1e-90 ref|ZP_06352546.1| transcriptional regulator, LysR family [Citro... 337 1e-90 ref|YP_003365404.1| LysR family transcriptional regulator [Citro... 337 2e-90 >ref|YP_003774894.1| LysR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ62986.1| LysR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 304 Score = 617 bits (1592), Expect = e-175, Method: Compositional matrix adjust. Identities = 303/304 (99%), Positives = 304/304 (100%) Query: 29 VNNTPLLEDLRLFCVVARHSSFAGSAREVGASPAYISKRIALLEQALGVRLFHRTTRSVV 88 +NNTPLLEDLRLFCVVARHSSFAGSAREVGASPAYISKRIALLEQALGVRLFHRTTRSVV Sbjct: 1 MNNTPLLEDLRLFCVVARHSSFAGSAREVGASPAYISKRIALLEQALGVRLFHRTTRSVV 60 Query: 89 MTEEGGNVHEWARRILDDVEQMMETVSSAKRVPRGLLKISTSFGLGRKVVSPLLSRFASE 148 MTEEGGNVHEWARRILDDVEQMMETVSSAKRVPRGLLKISTSFGLGRKVVSPLLSRFASE Sbjct: 61 MTEEGGNVHEWARRILDDVEQMMETVSSAKRVPRGLLKISTSFGLGRKVVSPLLSRFASE 120 Query: 149 HPELKIQLELVDRQIDLVNEGIDLDIRVGAGHEPHLFSKRILPSQRVLCASPAYLKKHGL 208 HPELKIQLELVDRQIDLVNEGIDLDIRVGAGHEPHLFSKRILPSQRVLCASPAYLKKHGL Sbjct: 121 HPELKIQLELVDRQIDLVNEGIDLDIRVGAGHEPHLFSKRILPSQRVLCASPAYLKKHGL 180 Query: 209 PADLAALRQHQCLVIRERNQSFGIWRMMGPKGVETVKVSGMLASNHGEIIHQWAVDGHGI 268 PADLAALRQHQCLVIRERNQSFGIWRMMGPKGVETVKVSGMLASNHGEIIHQWAVDGHGI Sbjct: 181 PADLAALRQHQCLVIRERNQSFGIWRMMGPKGVETVKVSGMLASNHGEIIHQWAVDGHGI 240 Query: 269 ILRSAWDVADSLKRGRLVRVLPQYYQEADLCAVYPLQLKNSAKVRECVRFLQKHLDVAVL 328 ILRSAWDVADSLKRGRLVRVLPQYYQEADLCAVYPLQLKNSAKVRECVRFLQKHLDVAVL Sbjct: 241 ILRSAWDVADSLKRGRLVRVLPQYYQEADLCAVYPLQLKNSAKVRECVRFLQKHLDVAVL 300 Query: 329 PAMA 332 PAMA Sbjct: 301 PAMA 304 >ref|YP_935361.1| LysR family transcriptional regulator [Azoarcus sp. BH72] emb|CAL96475.1| putative transcriptional regulator, LysR family [Azoarcus sp. BH72] Length = 306 Score = 365 bits (936), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 176/295 (59%), Positives = 223/295 (75%) Query: 29 VNNTPLLEDLRLFCVVARHSSFAGSAREVGASPAYISKRIALLEQALGVRLFHRTTRSVV 88 +NN PLLEDLRL+C V R FA SARE+G S AY+SKRIALLE ALG +L HRTTRSV Sbjct: 1 MNNKPLLEDLRLYCTVVRRRGFAASARELGVSNAYVSKRIALLEDALGAKLLHRTTRSVS 60 Query: 89 MTEEGGNVHEWARRILDDVEQMMETVSSAKRVPRGLLKISTSFGLGRKVVSPLLSRFASE 148 +TE+G V +WA+RI+DDV+++ E VS+ K P GLL++ TS G GR V P L+ A Sbjct: 61 LTEQGEVVLQWAQRIVDDVDRLAEAVSAEKMAPAGLLRVCTSSGFGRNRVGPALAALAER 120 Query: 149 HPELKIQLELVDRQIDLVNEGIDLDIRVGAGHEPHLFSKRILPSQRVLCASPAYLKKHGL 208 +P ++IQLEL+DR +DL+ EG LDIRVGA EP L S+RI ++RVLCA+P Y+ +HG Sbjct: 121 YPAVEIQLELLDRPVDLIGEGFQLDIRVGAVREPDLISRRIARNERVLCAAPDYVARHGT 180 Query: 209 PADLAALRQHQCLVIRERNQSFGIWRMMGPKGVETVKVSGMLASNHGEIIHQWAVDGHGI 268 PADLA L +H+C+VIRER+Q FG W + GP G ETVKV G L++N+GE++ QWA+ GHGI Sbjct: 181 PADLAELARHRCIVIRERDQDFGRWTLTGPDGPETVKVGGPLSANNGEVVRQWALAGHGI 240 Query: 269 ILRSAWDVADSLKRGRLVRVLPQYYQEADLCAVYPLQLKNSAKVRECVRFLQKHL 323 ILRS WDV +L RG LV+VLP Y QEAD+ AVYP +L +SAKVR CV FL++ L Sbjct: 241 ILRSRWDVGPALARGELVQVLPAYRQEADVWAVYPSRLSSSAKVRVCVEFLEEWL 295 >ref|YP_001563384.1| LysR family transcriptional regulator [Delftia acidovorans SPH-1] gb|ABX34999.1| transcriptional regulator, LysR family [Delftia acidovorans SPH-1] Length = 326 Score = 348 bits (894), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 167/305 (54%), Positives = 222/305 (72%), Gaps = 3/305 (0%) Query: 22 GSQWLH---IVNNTPLLEDLRLFCVVARHSSFAGSAREVGASPAYISKRIALLEQALGVR 78 G W H IVN P EDLR+F VVAR S FA +A E+GASPAY+SKRI LLEQ LGV+ Sbjct: 13 GQLWFHCLQIVNKQPAPEDLRVFTVVARKSGFAAAAEELGASPAYVSKRIRLLEQELGVK 72 Query: 79 LFHRTTRSVVMTEEGGNVHEWARRILDDVEQMMETVSSAKRVPRGLLKISTSFGLGRKVV 138 L HRTTR V +TEEG V WA+RILDD++Q+M+ V+ + PRGLL++S+SFG GR V+ Sbjct: 73 LLHRTTRRVAVTEEGERVFHWAQRILDDMDQLMQEVAITRSEPRGLLRVSSSFGFGRHVI 132 Query: 139 SPLLSRFASEHPELKIQLELVDRQIDLVNEGIDLDIRVGAGHEPHLFSKRILPSQRVLCA 198 +P LSR HP L+++L++ DR +D+ EG DLD+RVG PHL ++R+ + RVLCA Sbjct: 133 APALSRLVERHPGLQVRLDVFDRLVDVAGEGFDLDVRVGDEIAPHLIARRLADNHRVLCA 192 Query: 199 SPAYLKKHGLPADLAALRQHQCLVIRERNQSFGIWRMMGPKGVETVKVSGMLASNHGEII 258 +PAYL + G P A L H CL I+ER+Q+FG+WR+ ++VKV+G L++N+GE++ Sbjct: 193 APAYLARRGTPRTPAELSAHDCLAIKERDQAFGVWRLRAGAAEQSVKVTGPLSANNGEMV 252 Query: 259 HQWAVDGHGIILRSAWDVADSLKRGRLVRVLPQYYQEADLCAVYPLQLKNSAKVRECVRF 318 QWAVDG GI LRS WDV L+ GRLV++LP++ QEA++ AVYP +L+ SAKVR CV F Sbjct: 253 VQWAVDGRGIALRSLWDVGAHLQAGRLVQLLPEWRQEANVWAVYPTRLQLSAKVRVCVEF 312 Query: 319 LQKHL 323 LQ+H Sbjct: 313 LQEHF 317 >ref|YP_004489629.1| LysR family transcriptional regulator [Delftia sp. Cs1-4] gb|AEF91274.1| transcriptional regulator, LysR family [Delftia sp. Cs1-4] Length = 326 Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 166/302 (54%), Positives = 221/302 (73%), Gaps = 3/302 (0%) Query: 25 WLH---IVNNTPLLEDLRLFCVVARHSSFAGSAREVGASPAYISKRIALLEQALGVRLFH 81 W H IVN P EDLR+F VVAR S FA +A E+GASPAY+SKRI LLEQ LGV+L H Sbjct: 16 WFHCLQIVNKQPAPEDLRVFTVVARKSGFAAAAEELGASPAYVSKRIRLLEQELGVKLLH 75 Query: 82 RTTRSVVMTEEGGNVHEWARRILDDVEQMMETVSSAKRVPRGLLKISTSFGLGRKVVSPL 141 RTTR V +TEEG V WA+RILDD++Q+M+ V+ + PRGLL++S+SFG GR V++P Sbjct: 76 RTTRRVAVTEEGERVFHWAQRILDDMDQLMQEVAITRSEPRGLLRVSSSFGFGRHVIAPA 135 Query: 142 LSRFASEHPELKIQLELVDRQIDLVNEGIDLDIRVGAGHEPHLFSKRILPSQRVLCASPA 201 LSR HP L+++L++ DR +D+ EG DLD+RVG PHL ++R+ + RVLCA+PA Sbjct: 136 LSRLVERHPGLQVRLDVFDRLVDVAGEGFDLDVRVGDEIAPHLIARRLADNHRVLCAAPA 195 Query: 202 YLKKHGLPADLAALRQHQCLVIRERNQSFGIWRMMGPKGVETVKVSGMLASNHGEIIHQW 261 YL + G P A L H CL I+ER+Q+FG+WR+ ++VKV+G L++N+GE++ QW Sbjct: 196 YLARRGTPRTPAELSAHDCLAIKERDQAFGVWRLRAGAAEQSVKVTGPLSANNGEMVVQW 255 Query: 262 AVDGHGIILRSAWDVADSLKRGRLVRVLPQYYQEADLCAVYPLQLKNSAKVRECVRFLQK 321 AVDG GI LRS WDV L+ GRLV++LP++ QEA++ AVYP +L+ SAKVR CV FLQ+ Sbjct: 256 AVDGRGIALRSLWDVGAHLQAGRLVQLLPEWRQEANVWAVYPTRLQLSAKVRVCVEFLQE 315 Query: 322 HL 323 H Sbjct: 316 HF 317 >ref|ZP_04562316.1| conserved hypothetical protein [Citrobacter sp. 30_2] gb|EEH93292.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 313 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 154/297 (51%), Positives = 222/297 (74%) Query: 27 HIVNNTPLLEDLRLFCVVARHSSFAGSAREVGASPAYISKRIALLEQALGVRLFHRTTRS 86 I+NN PLL DLR+F +VAR + FA A E+G SPA+ISKR+ALLEQ L V L HRTTR Sbjct: 7 QIMNNLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFISKRVALLEQTLNVVLLHRTTRR 66 Query: 87 VVMTEEGGNVHEWARRILDDVEQMMETVSSAKRVPRGLLKISTSFGLGRKVVSPLLSRFA 146 V +TEEG ++EWA+RIL DV+QMM+ +S A+++P+G+L+I +SFG GR+VV+P LS A Sbjct: 67 VTITEEGERIYEWAQRILQDVDQMMDELSDARQIPQGMLRIISSFGFGRRVVAPALSALA 126 Query: 147 SEHPELKIQLELVDRQIDLVNEGIDLDIRVGAGHEPHLFSKRILPSQRVLCASPAYLKKH 206 E+P+L+++ ++ DR +D+VNEG+DLDIR+G P+L ++++ + R+LCASP ++ +H Sbjct: 127 KEYPQLELRFDVEDRLVDMVNEGVDLDIRIGDDIAPNLIARKLATNYRILCASPEFVARH 186 Query: 207 GLPADLAALRQHQCLVIRERNQSFGIWRMMGPKGVETVKVSGMLASNHGEIIHQWAVDGH 266 G+P L L CLVI+ER+ FGIW+M +G ++KV+G L+SNHGE++HQW +DG Sbjct: 187 GVPKQLNDLSTFPCLVIKERDHPFGIWQMRNKEGAHSIKVTGPLSSNHGEVVHQWCLDGQ 246 Query: 267 GIILRSAWDVADSLKRGRLVRVLPQYYQEADLCAVYPLQLKNSAKVRECVRFLQKHL 323 GI LRS WDV D++ G LV +LP+YYQ A++ AVY +L SAK+R V +L+++ Sbjct: 247 GIALRSWWDVCDNIASGHLVHILPEYYQPANIWAVYVSRLATSAKIRITVEYLRRYF 303 >ref|YP_970444.1| LysR family transcriptional regulator [Acidovorax citrulli AAC00-1] gb|ABM32670.1| transcriptional regulator, LysR family [Acidovorax citrulli AAC00-1] Length = 342 Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 164/297 (55%), Positives = 214/297 (72%) Query: 27 HIVNNTPLLEDLRLFCVVARHSSFAGSAREVGASPAYISKRIALLEQALGVRLFHRTTRS 86 HIV+ TP +DLR+F V R +SFAG+A E+GASPAY+SKRI LLE+ L V+L HRTTR Sbjct: 36 HIVHKTPATDDLRVFTAVVRKASFAGAAAELGASPAYVSKRIRLLEEELAVKLLHRTTRR 95 Query: 87 VVMTEEGGNVHEWARRILDDVEQMMETVSSAKRVPRGLLKISTSFGLGRKVVSPLLSRFA 146 V +TEEG V WA+RILDD +Q+++ V+ +R PRGLL++S SFG GR++V+P +SR Sbjct: 96 VAVTEEGERVFHWAQRILDDWDQLLQEVAVTRREPRGLLRVSCSFGFGRRIVAPAVSRLV 155 Query: 147 SEHPELKIQLELVDRQIDLVNEGIDLDIRVGAGHEPHLFSKRILPSQRVLCASPAYLKKH 206 HP L+++LE+ DR +D+ EG DLDIRVG PHL ++R+ + RVLCA+P YL + Sbjct: 156 ERHPGLQVRLEVFDRLVDVAGEGFDLDIRVGDEIAPHLIARRLAGNHRVLCAAPGYLARK 215 Query: 207 GLPADLAALRQHQCLVIRERNQSFGIWRMMGPKGVETVKVSGMLASNHGEIIHQWAVDGH 266 G P + L H CLVI+ER+ FG+WR+ TVKV G L++NHGE+ QWAVDG Sbjct: 216 GTPRAVDDLAGHDCLVIKERDHPFGVWRLRSGAADRTVKVRGSLSANHGEMAVQWAVDGR 275 Query: 267 GIILRSAWDVADSLKRGRLVRVLPQYYQEADLCAVYPLQLKNSAKVRECVRFLQKHL 323 GI+LRS WDV L GRLVRVLP++ QEA++ AVYP +L+ SAKVR CV FLQ H Sbjct: 276 GIVLRSLWDVGPDLATGRLVRVLPEWQQEANVWAVYPTRLERSAKVRVCVEFLQAHF 332 >ref|ZP_04764813.1| transcriptional regulator, LysR family [Acidovorax delafieldii 2AN] gb|EER58386.1| transcriptional regulator, LysR family [Acidovorax delafieldii 2AN] Length = 315 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 163/297 (54%), Positives = 220/297 (74%) Query: 27 HIVNNTPLLEDLRLFCVVARHSSFAGSAREVGASPAYISKRIALLEQALGVRLFHRTTRS 86 IV+ +P EDLR+F VV R +SF +A E+GASPAY+SKRI LLEQ LGV+L HRTTR Sbjct: 10 QIVHKSPATEDLRVFTVVVRKASFGEAATELGASPAYVSKRIRLLEQELGVKLLHRTTRR 69 Query: 87 VVMTEEGGNVHEWARRILDDVEQMMETVSSAKRVPRGLLKISTSFGLGRKVVSPLLSRFA 146 V +TEEG V +WA+RILDD++Q+++ V+ +R PRG L++S+SFG GR++V+P +SR Sbjct: 70 VAVTEEGERVFQWAQRILDDMDQLLQEVAVTRREPRGQLRVSSSFGFGRQIVAPAMSRLV 129 Query: 147 SEHPELKIQLELVDRQIDLVNEGIDLDIRVGAGHEPHLFSKRILPSQRVLCASPAYLKKH 206 ++H L+++LE+ DR +D+ EG DLD+RVG PHL ++R+ + RVLCA+PAYL +H Sbjct: 130 AQHAGLQVRLEVFDRLVDVAGEGFDLDVRVGDEIAPHLIARRLADNHRVLCAAPAYLARH 189 Query: 207 GLPADLAALRQHQCLVIRERNQSFGIWRMMGPKGVETVKVSGMLASNHGEIIHQWAVDGH 266 G P LA L H CLVI+ER+ FG+WR+ G ETVKV G L++N+GE++ QWAVDG Sbjct: 190 GSPRTLADLPGHDCLVIKERDHPFGVWRLRGGAMDETVKVRGPLSANNGEMVVQWAVDGR 249 Query: 267 GIILRSAWDVADSLKRGRLVRVLPQYYQEADLCAVYPLQLKNSAKVRECVRFLQKHL 323 GI LRS WDV L+ GRLV+VLP + QEA++ AVYP +L SAKVR CV FL+ + Sbjct: 250 GIALRSLWDVGAHLRAGRLVQVLPDWRQEANVWAVYPTRLDRSAKVRVCVEFLEAYF 306 >ref|YP_004235537.1| LysR family transcriptional regulator [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX46970.1| transcriptional regulator, LysR family [Acidovorax avenae subsp. avenae ATCC 19860] Length = 305 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 161/295 (54%), Positives = 213/295 (72%) Query: 29 VNNTPLLEDLRLFCVVARHSSFAGSAREVGASPAYISKRIALLEQALGVRLFHRTTRSVV 88 ++ TP +DLR+F V R +SFA +A E+GASPAY+SKRI LLE+ L V+L HRTTR V Sbjct: 1 MHKTPATDDLRVFTAVVRKASFAEAATELGASPAYVSKRIRLLEEELAVKLLHRTTRRVA 60 Query: 89 MTEEGGNVHEWARRILDDVEQMMETVSSAKRVPRGLLKISTSFGLGRKVVSPLLSRFASE 148 +TEEG V WA+RILDD +Q+++ V+ +R PRGLL++S SFG GR++V+P +SR Sbjct: 61 VTEEGERVFHWAQRILDDWDQLLQEVAVTRREPRGLLRLSCSFGFGRRIVAPAVSRLVER 120 Query: 149 HPELKIQLELVDRQIDLVNEGIDLDIRVGAGHEPHLFSKRILPSQRVLCASPAYLKKHGL 208 HP L+++LE+ DR +D+ EG DLDIRVG PHL ++R+ + RVLCA+PAYL + G+ Sbjct: 121 HPGLQVRLEVFDRLVDVAGEGFDLDIRVGDEIAPHLIARRLAGNHRVLCAAPAYLARKGM 180 Query: 209 PADLAALRQHQCLVIRERNQSFGIWRMMGPKGVETVKVSGMLASNHGEIIHQWAVDGHGI 268 P + L H CLVI+ER+ FG+WR+ TVKV G L++NHGE+ QWAVDG GI Sbjct: 181 PRAVDDLASHDCLVIKERDHPFGVWRLRSGAADRTVKVRGPLSANHGEMAVQWAVDGRGI 240 Query: 269 ILRSAWDVADSLKRGRLVRVLPQYYQEADLCAVYPLQLKNSAKVRECVRFLQKHL 323 +LRS WDV L GRLVRVLP++ QEA++ AVYP +L+ SAKVR CV FLQ H Sbjct: 241 VLRSLWDVGPDLAAGRLVRVLPEWQQEANVWAVYPTRLERSAKVRVCVEFLQAHF 295 >ref|ZP_06352546.1| transcriptional regulator, LysR family [Citrobacter youngae ATCC 29220] gb|EFE10602.1| transcriptional regulator, LysR family [Citrobacter youngae ATCC 29220] Length = 305 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 152/295 (51%), Positives = 219/295 (74%) Query: 29 VNNTPLLEDLRLFCVVARHSSFAGSAREVGASPAYISKRIALLEQALGVRLFHRTTRSVV 88 +NN PLL DLR+F +VAR + FA A E+G SPA+ISKR+ALLEQ L V L HRTTR V Sbjct: 1 MNNLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFISKRVALLEQTLNVVLLHRTTRRVT 60 Query: 89 MTEEGGNVHEWARRILDDVEQMMETVSSAKRVPRGLLKISTSFGLGRKVVSPLLSRFASE 148 +TEEG ++EWA+RIL DV+QMM+ +S +++P+G+L+I +SFG GR+VV+P LS A E Sbjct: 61 ITEEGERIYEWAQRILQDVDQMMDELSDVRQIPQGMLRIISSFGFGRRVVAPALSALAKE 120 Query: 149 HPELKIQLELVDRQIDLVNEGIDLDIRVGAGHEPHLFSKRILPSQRVLCASPAYLKKHGL 208 P+L+++ ++ DR +DLVNEG+DLDIR+G P+L ++++ + R+LCASP ++ +HG+ Sbjct: 121 CPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNYRILCASPEFVAQHGV 180 Query: 209 PADLAALRQHQCLVIRERNQSFGIWRMMGPKGVETVKVSGMLASNHGEIIHQWAVDGHGI 268 P L L CLVI+ER+ FGIW+M +G ++KV+G L+SNHGE++HQW +DG GI Sbjct: 181 PKQLNDLSTFPCLVIKERDHPFGIWQMRNKEGAHSIKVTGPLSSNHGEVVHQWCLDGQGI 240 Query: 269 ILRSAWDVADSLKRGRLVRVLPQYYQEADLCAVYPLQLKNSAKVRECVRFLQKHL 323 LRS WDV D++ G L+ +LP+YYQ A++ AVY +L SAK+R V +L+++ Sbjct: 241 ALRSWWDVCDNIASGHLMHILPEYYQPANIWAVYVSRLATSAKIRITVEYLRRYF 295 >ref|YP_003365404.1| LysR family transcriptional regulator [Citrobacter rodentium ICC168] emb|CBG88596.1| LysR-family transcriptional regulator [Citrobacter rodentium ICC168] Length = 305 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 153/295 (51%), Positives = 222/295 (75%) Query: 29 VNNTPLLEDLRLFCVVARHSSFAGSAREVGASPAYISKRIALLEQALGVRLFHRTTRSVV 88 +NN PLL DLR+F +VAR + FA A+E+G SPA++SKRIALLEQ+L V L HRTTR V Sbjct: 1 MNNLPLLNDLRIFMLVARRAGFAAVAQEMGVSPAFVSKRIALLEQSLNVTLLHRTTRRVS 60 Query: 89 MTEEGGNVHEWARRILDDVEQMMETVSSAKRVPRGLLKISTSFGLGRKVVSPLLSRFASE 148 +TEEG ++ WA+RIL DV+QM++ +S+A++VP+G+L+I +SFG GR+VV+P LS A + Sbjct: 61 ITEEGERIYAWAQRILCDVDQMLDELSAARQVPQGMLRIISSFGFGRRVVAPALSALAKQ 120 Query: 149 HPELKIQLELVDRQIDLVNEGIDLDIRVGAGHEPHLFSKRILPSQRVLCASPAYLKKHGL 208 +P+L+++ ++ DR +DL NEG+DLDIR+G P+L ++++ + R+LCASPA+L ++G Sbjct: 121 YPQLELRFDVADRLVDLANEGVDLDIRIGDDIAPNLIARKLGTNYRILCASPAFLARYGT 180 Query: 209 PADLAALRQHQCLVIRERNQSFGIWRMMGPKGVETVKVSGMLASNHGEIIHQWAVDGHGI 268 P L L + CLVI+ER+ FG+W++ +G +KV+G L+SNHGEI+HQW +DG GI Sbjct: 181 PKQLNELSAYPCLVIKERDHPFGVWQLQSKEGQHAIKVTGALSSNHGEIVHQWCLDGQGI 240 Query: 269 ILRSAWDVADSLKRGRLVRVLPQYYQEADLCAVYPLQLKNSAKVRECVRFLQKHL 323 LRS WDV D++ G LV +LP+YYQ A++ AVY +L SAKVR V FL+++ Sbjct: 241 ALRSWWDVCDNIASGHLVHLLPEYYQPANIWAVYVSRLAASAKVRITVEFLRRYF 295