BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0325.p (56 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774627.1| hypothetical protein Hsero_1202 [Herbaspiril... 108 3e-22 ref|YP_004235277.1| CsbD family protein [Acidovorax avenae subsp... 78 4e-13 ref|YP_970761.1| CsbD family protein [Acidovorax citrulli AAC00-... 78 5e-13 ref|YP_412295.1| CsbD-like protein [Nitrosospira multiformis ATC... 74 6e-12 ref|YP_983498.1| CsbD family protein [Polaromonas naphthalenivor... 71 6e-11 ref|YP_001050505.1| CsbD family protein [Shewanella baltica OS15... 70 1e-10 ref|YP_004752381.1| CsbD-like protein [Collimonas fungivorans Te... 69 2e-10 ref|ZP_07390402.1| CsbD family protein [Shewanella baltica OS183... 69 3e-10 ref|YP_001564494.1| CsbD family protein [Delftia acidovorans SPH... 67 6e-10 ref|YP_002358053.1| CsbD family protein [Shewanella baltica OS22... 67 8e-10 >ref|YP_003774627.1| hypothetical protein Hsero_1202 [Herbaspirillum seropedicae SmR1] gb|ADJ62719.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 56 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 56/56 (100%), Positives = 56/56 (100%) Query: 1 MNKDQVKGSLKEAAGKVQEKTGELTGNKSQELKGAARQVEGNVQKTYGDAKEAAKD 56 MNKDQVKGSLKEAAGKVQEKTGELTGNKSQELKGAARQVEGNVQKTYGDAKEAAKD Sbjct: 1 MNKDQVKGSLKEAAGKVQEKTGELTGNKSQELKGAARQVEGNVQKTYGDAKEAAKD 56 >ref|YP_004235277.1| CsbD family protein [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX46710.1| CsbD family protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 59 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/56 (69%), Positives = 46/56 (82%) Query: 1 MNKDQVKGSLKEAAGKVQEKTGELTGNKSQELKGAARQVEGNVQKTYGDAKEAAKD 56 MN DQ+KG+LKEAAGKVQ+KTGE+ + Q+ KG A+QVEGNVQK YGDAKE KD Sbjct: 1 MNTDQIKGTLKEAAGKVQQKTGEVFNSPEQQAKGMAKQVEGNVQKNYGDAKENIKD 56 >ref|YP_970761.1| CsbD family protein [Acidovorax citrulli AAC00-1] gb|ABM32987.1| CsbD family protein [Acidovorax citrulli AAC00-1] Length = 59 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 39/56 (69%), Positives = 45/56 (80%) Query: 1 MNKDQVKGSLKEAAGKVQEKTGELTGNKSQELKGAARQVEGNVQKTYGDAKEAAKD 56 MN DQ+KGSLKEAAGKVQ+KTGE+ + + KG A+QVEGNVQK YGDAKE KD Sbjct: 1 MNTDQIKGSLKEAAGKVQQKTGEVFNSPEHQAKGMAKQVEGNVQKNYGDAKENIKD 56 >ref|YP_412295.1| CsbD-like protein [Nitrosospira multiformis ATCC 25196] gb|ABB74903.1| CsbD-like protein [Nitrosospira multiformis ATCC 25196] Length = 61 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 37/56 (66%), Positives = 46/56 (82%) Query: 1 MNKDQVKGSLKEAAGKVQEKTGELTGNKSQELKGAARQVEGNVQKTYGDAKEAAKD 56 MNKDQVKG+ K+ AGKVQ++ GELTG+K Q+ KG A+Q EG +QK +GDAKEA KD Sbjct: 1 MNKDQVKGAAKDIAGKVQQEVGELTGDKEQQAKGLAKQAEGKIQKGFGDAKEAVKD 56 >ref|YP_983498.1| CsbD family protein [Polaromonas naphthalenivorans CJ2] gb|ABM38577.1| CsbD family protein [Polaromonas naphthalenivorans CJ2] Length = 61 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 37/56 (66%), Positives = 41/56 (73%) Query: 1 MNKDQVKGSLKEAAGKVQEKTGELTGNKSQELKGAARQVEGNVQKTYGDAKEAAKD 56 MN DQVKG+LKEAAGKVQ KTGEL + Q+ KG +QVEG QK GDAKE KD Sbjct: 1 MNTDQVKGALKEAAGKVQSKTGELIDSPEQQAKGMVKQVEGKTQKNLGDAKEVLKD 56 >ref|YP_001050505.1| CsbD family protein [Shewanella baltica OS155] gb|ABN61636.1| CsbD family protein [Shewanella baltica OS155] Length = 109 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/56 (57%), Positives = 44/56 (78%) Query: 1 MNKDQVKGSLKEAAGKVQEKTGELTGNKSQELKGAARQVEGNVQKTYGDAKEAAKD 56 MNKD ++GS+K+AAGK Q+K GE+ GN Q++KG +Q++G QKT G+ KEAAKD Sbjct: 49 MNKDLIEGSIKDAAGKAQQKIGEIVGNPKQQVKGVQKQIKGKTQKTMGNVKEAAKD 104 >ref|YP_004752381.1| CsbD-like protein [Collimonas fungivorans Ter331] gb|AEK61558.1| CsbD-like protein [Collimonas fungivorans Ter331] Length = 60 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/56 (62%), Positives = 44/56 (78%) Query: 1 MNKDQVKGSLKEAAGKVQEKTGELTGNKSQELKGAARQVEGNVQKTYGDAKEAAKD 56 MNKDQVKG+ K+ AGK+QE G+L GNK Q+ KG +QVEG ++K+ GDAKE AKD Sbjct: 1 MNKDQVKGASKDIAGKIQEGAGKLAGNKEQQAKGLQKQVEGKIEKSLGDAKEVAKD 56 >ref|ZP_07390402.1| CsbD family protein [Shewanella baltica OS183] gb|EFM16999.1| CsbD family protein [Shewanella baltica OS183] gb|AEG11449.1| CsbD family protein [Shewanella baltica BA175] gb|AEH13952.1| CsbD family protein [Shewanella baltica OS117] Length = 61 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 32/56 (57%), Positives = 44/56 (78%) Query: 1 MNKDQVKGSLKEAAGKVQEKTGELTGNKSQELKGAARQVEGNVQKTYGDAKEAAKD 56 MNKD ++GS+K+AAGK Q+K GE+ GN Q++KG +Q++G QKT G+ KEAAKD Sbjct: 1 MNKDLIEGSIKDAAGKAQQKIGEIVGNPKQQVKGVQKQIKGKTQKTMGNVKEAAKD 56 >ref|YP_001564494.1| CsbD family protein [Delftia acidovorans SPH-1] ref|YP_004488699.1| CsbD family protein [Delftia sp. Cs1-4] gb|ABX36109.1| CsbD family protein [Delftia acidovorans SPH-1] gb|EEE72652.1| predicted protein [Populus trichocarpa] gb|AEF90344.1| CsbD family protein [Delftia sp. Cs1-4] Length = 59 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/56 (60%), Positives = 41/56 (73%) Query: 1 MNKDQVKGSLKEAAGKVQEKTGELTGNKSQELKGAARQVEGNVQKTYGDAKEAAKD 56 MN DQ+KG+LK+AAGKVQ+K GEL + Q+ KG A+QVEG QK GD KE KD Sbjct: 1 MNTDQIKGTLKDAAGKVQQKAGELIDSPEQQAKGIAKQVEGTAQKKLGDVKEVLKD 56 >ref|YP_002358053.1| CsbD family protein [Shewanella baltica OS223] gb|ACK46630.1| CsbD family protein [Shewanella baltica OS223] Length = 61 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 31/56 (55%), Positives = 43/56 (76%) Query: 1 MNKDQVKGSLKEAAGKVQEKTGELTGNKSQELKGAARQVEGNVQKTYGDAKEAAKD 56 MNKD ++GS+K+ AGK Q+K GE+ GN Q++KG +Q++G QKT G+ KEAAKD Sbjct: 1 MNKDLIEGSIKDTAGKAQQKIGEIVGNPKQQVKGVQKQIKGKTQKTMGNVKEAAKD 56