BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0303.p (159 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774648.1| transcription regulator protein [Herbaspiril... 326 9e-88 ref|YP_001354132.1| transcriptional regulator NrdR [Janthinobact... 270 7e-71 ref|YP_001100631.1| transcriptional regulator NrdR [Herminiimona... 263 7e-69 ref|YP_004754046.1| ribonucleotide reductase transcriptional reg... 246 8e-64 ref|YP_295013.1| transcriptional regulator NrdR [Ralstonia eutro... 221 3e-56 ref|YP_787455.1| transcriptional regulator NrdR [Bordetella aviu... 221 3e-56 ref|ZP_08274701.1| Ribonucleotide reductase transcriptional regu... 220 5e-56 ref|YP_002006320.1| NrdR family transcriptional regulator [Cupri... 220 6e-56 ref|YP_727280.1| transcriptional regulator NrdR [Ralstonia eutro... 217 6e-55 gb|EGP45840.1| transcriptional regulator NrdR [Achromobacter xyl... 215 2e-54 >ref|YP_003774648.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ62740.1| transcription regulator, consists of a Zn-ribbon and ATP-cone domains protein [Herbaspirillum seropedicae SmR1] Length = 159 Score = 326 bits (835), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 159/159 (100%), Positives = 159/159 (100%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE Sbjct: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD Sbjct: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIAEVGQERKGAKRRDD 159 KIAYIRFASVYKSFEDVAEFQDAIAEVGQERKGAKRRDD Sbjct: 121 KIAYIRFASVYKSFEDVAEFQDAIAEVGQERKGAKRRDD 159 >ref|YP_001354132.1| transcriptional regulator NrdR [Janthinobacterium sp. Marseille] sp|A6T0T5.1|NRDR_JANMA RecName: Full=Transcriptional repressor NrdR gb|ABR89909.1| transcriptional regulator [Janthinobacterium sp. Marseille] Length = 155 Score = 270 bits (689), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 131/155 (84%), Positives = 143/155 (92%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 MKCPFC H+DT VLDTR+SE+G SIRRRRRC +CDKRFTTYERIELT+PV+VKKNGSRT+ Sbjct: 1 MKCPFCQHDDTQVLDTRVSEEGDSIRRRRRCTSCDKRFTTYERIELTMPVVVKKNGSRTD 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 FDP KL+GSL LALRKRPVSAEAVD AI I+ KLL SGEREV+SGQIGELVMREL+RLD Sbjct: 61 FDPKKLQGSLQLALRKRPVSAEAVDAAIHRIEQKLLSSGEREVISGQIGELVMRELQRLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIAEVGQERKGAK 155 KIAYIRFASVYKSFEDVAEFQDAIAEVG+ERK AK Sbjct: 121 KIAYIRFASVYKSFEDVAEFQDAIAEVGRERKPAK 155 >ref|YP_001100631.1| transcriptional regulator NrdR [Herminiimonas arsenicoxydans] sp|A4G7M3.1|NRDR_HERAR RecName: Full=Transcriptional repressor NrdR emb|CAL62510.1| Transcriptional repressor NrdR [Herminiimonas arsenicoxydans] Length = 156 Score = 263 bits (672), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 128/152 (84%), Positives = 139/152 (91%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 MKCPFC H+DT VLDTR+SE+G SIRRRRRC +CDKRFTTYERIEL +PVIVKKNGSRT+ Sbjct: 1 MKCPFCQHDDTQVLDTRISEEGDSIRRRRRCVSCDKRFTTYERIELAMPVIVKKNGSRTD 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 FDP KL+ SL LALRKRPVSAEAVD AI I+ KLL SGEREV+SGQIGELVMREL+RLD Sbjct: 61 FDPKKLQASLQLALRKRPVSAEAVDAAIHRIEQKLLSSGEREVVSGQIGELVMRELQRLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIAEVGQERK 152 KIAYIRFASVYKSFEDVAEFQDAIAEVG+ERK Sbjct: 121 KIAYIRFASVYKSFEDVAEFQDAIAEVGRERK 152 >ref|YP_004754046.1| ribonucleotide reductase transcriptional regulator NrdR [Collimonas fungivorans Ter331] gb|AEK63223.1| Ribonucleotide reductase transcriptional regulator NrdR [Collimonas fungivorans Ter331] Length = 155 Score = 246 bits (628), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 118/148 (79%), Positives = 131/148 (88%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 MKCPFC HE+T VLDTR+SE+G SIRRRRRC CDKRFTT+ERIEL +PVIVKKNGSRT+ Sbjct: 1 MKCPFCQHEETQVLDTRVSEEGDSIRRRRRCMQCDKRFTTFERIELAMPVIVKKNGSRTD 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 FDP KLR SLMLALRKRPVS EA+D A+Q I++KLL SGEREV+SG +GELVMRELKRLD Sbjct: 61 FDPLKLRASLMLALRKRPVSVEALDEALQRIKEKLLSSGEREVLSGHVGELVMRELKRLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIAEVG 148 KIAYIRFASVYKSFEDVAEFQ+ I E Sbjct: 121 KIAYIRFASVYKSFEDVAEFQNMIEEFS 148 >ref|YP_295013.1| transcriptional regulator NrdR [Ralstonia eutropha JMP134] sp|Q474L4.1|NRDR_RALEJ RecName: Full=Transcriptional repressor NrdR gb|AAZ60169.1| Protein of unknown function DUF193 [Ralstonia eutropha JMP134] Length = 154 Score = 221 bits (563), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 104/147 (70%), Positives = 124/147 (84%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 MKCPFC H +T VLDTR+SEDG ++RRRRRC CD+RFTTYERIEL P IVKKNGSR + Sbjct: 1 MKCPFCGHSNTQVLDTRMSEDGDAVRRRRRCEACDRRFTTYERIELFFPAIVKKNGSRVD 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 + AKL+ S+ LALRKRPVSAEA+D AI I++KLL G++E+ S Q+GELVMREL++LD Sbjct: 61 YSRAKLKDSMRLALRKRPVSAEAIDEAITRIEEKLLALGQKEIPSSQVGELVMRELRKLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIAEV 147 KIAYIRFASVY+SFEDVAEF D +AEV Sbjct: 121 KIAYIRFASVYRSFEDVAEFSDVLAEV 147 >ref|YP_787455.1| transcriptional regulator NrdR [Bordetella avium 197N] sp|Q2KV16.1|NRDR_BORA1 RecName: Full=Transcriptional repressor NrdR emb|CAJ50570.1| putative ATP-binding regulatory protein [Bordetella avium 197N] Length = 160 Score = 221 bits (563), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 105/154 (68%), Positives = 126/154 (81%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 M+CPFC H DT V+D+R+SE+G +IRRRRRC +CDKRFTTYER+EL +P +VK++GSR+E Sbjct: 1 MRCPFCGHADTQVVDSRVSEEGDTIRRRRRCLSCDKRFTTYERVELAMPTVVKRDGSRSE 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 +D AKLRGSL LALRKRPVS E VD A+ I+D LL SG REV S IGELVM ELKRLD Sbjct: 61 YDAAKLRGSLALALRKRPVSTEEVDGAVARIEDTLLASGAREVASEHIGELVMNELKRLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIAEVGQERKGA 154 K+AY+RFASVYKSFED+ EF +AI E+ R GA Sbjct: 121 KVAYVRFASVYKSFEDIGEFVEAIREMQGPRLGA 154 >ref|ZP_08274701.1| Ribonucleotide reductase transcriptional regulator NrdR [Oxalobacteraceae bacterium IMCC9480] gb|EGF31831.1| Ribonucleotide reductase transcriptional regulator NrdR [Oxalobacteraceae bacterium IMCC9480] Length = 157 Score = 220 bits (561), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 115/152 (75%), Positives = 127/152 (83%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 MKCPFC H+DT VLDTR+SE G +IRRRRRC C+KRF T+ERIEL +P IVKK+GSRTE Sbjct: 1 MKCPFCQHDDTQVLDTRVSELGDAIRRRRRCVKCEKRFITFERIELVMPAIVKKSGSRTE 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 FD KLR SLMLALRKRPVSA AVD A+ I++K+ SGERE+ SG IGELVM ELK LD Sbjct: 61 FDSTKLRSSLMLALRKRPVSAVAVDAAVHCIEEKIRTSGEREIASGHIGELVMHELKSLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIAEVGQERK 152 KIAYIRFASVYKSFEDVAEFQ AIAEV ERK Sbjct: 121 KIAYIRFASVYKSFEDVAEFQAAIAEVAHERK 152 >ref|YP_002006320.1| NrdR family transcriptional regulator [Cupriavidus taiwanensis LMG 19424] sp|B3R5S1.1|NRDR_CUPTR RecName: Full=Transcriptional repressor NrdR emb|CAQ70257.1| conserved hypothetical protein; putative regulator, zinc finger domain, ATP cone domain [Cupriavidus taiwanensis LMG 19424] Length = 154 Score = 220 bits (560), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 104/147 (70%), Positives = 124/147 (84%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 MKCPFC H +T VLDTR+SEDG ++RRRRRC CD+RFTTYERIEL P IVKKNGSR + Sbjct: 1 MKCPFCGHSNTQVLDTRMSEDGDAVRRRRRCEACDRRFTTYERIELFFPAIVKKNGSRVD 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 + AKL+ S+ LALRKRPVSAEA+D AI I++KLL GE+E+ S Q+GELVMREL++LD Sbjct: 61 YARAKLKDSMRLALRKRPVSAEAIDEAITRIEEKLLALGEKEIPSSQVGELVMRELRKLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIAEV 147 KIAYIRFASVY+SFEDV+EF D +AEV Sbjct: 121 KIAYIRFASVYRSFEDVSEFSDVLAEV 147 >ref|YP_727280.1| transcriptional regulator NrdR [Ralstonia eutropha H16] ref|YP_004686534.1| transcriptional regulator NrdR [Cupriavidus necator N-1] sp|Q0K7V9.1|NRDR_RALEH RecName: Full=Transcriptional repressor NrdR emb|CAJ93912.1| predicted transcriptional regulator, consists ofa Zn-ribbon and a ATP-cone domain [Ralstonia eutropha H16] gb|AEI78053.1| transcriptional regulator NrdR [Cupriavidus necator N-1] Length = 155 Score = 217 bits (552), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 105/155 (67%), Positives = 126/155 (81%), Gaps = 2/155 (1%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 MKCPFC H +T VLDTR+SEDG ++RRRRRC CD+RFTTYERIEL P IVKKNGSR + Sbjct: 1 MKCPFCGHSNTQVLDTRMSEDGDAVRRRRRCEACDRRFTTYERIELFFPAIVKKNGSRVD 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 + AKL+ S+ LALRKRPVSAEA+D AI I++KLL GE+E+ S Q+GELVMREL++LD Sbjct: 61 YTRAKLKDSMRLALRKRPVSAEAIDEAITRIEEKLLALGEKEIPSSQVGELVMRELRKLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIAEVGQE--RKG 153 KIAYIRFASVY+SFEDV+EF+D + E RKG Sbjct: 121 KIAYIRFASVYRSFEDVSEFRDVLDEFAASTPRKG 155 >gb|EGP45840.1| transcriptional regulator NrdR [Achromobacter xylosoxidans AXX-A] Length = 159 Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 99/147 (67%), Positives = 125/147 (85%) Query: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 M+CPFC + +T V+D+R+SE+G +IRRRRRC +CDKRFTTYER+EL LP +VK+NGSR++ Sbjct: 1 MRCPFCGNSETQVVDSRVSEEGDAIRRRRRCQSCDKRFTTYERVELALPSVVKRNGSRSD 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 +DPAKLR SL LALRKRPVS E VD A+ I+++LL SG REV SG IGELVM EL++LD Sbjct: 61 YDPAKLRASLSLALRKRPVSTEDVDAAVARIEEQLLASGLREVASGHIGELVMNELRKLD 120 Query: 121 KIAYIRFASVYKSFEDVAEFQDAIAEV 147 K+AY+RFASVYKSFED+ EF +AI E+ Sbjct: 121 KVAYVRFASVYKSFEDIGEFVEAIREM 147