BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0295.p (449 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774654.1| composite two-component transcription regula... 767 0.0 ref|YP_982911.1| integral membrane sensor hybrid histidine kinas... 390 e-106 ref|YP_586986.1| two-component hybrid histidine kinase, periplas... 311 2e-82 ref|YP_004681300.1| RpfC family transcriptional regulator [Cupri... 294 3e-77 ref|YP_001766581.1| integral membrane sensor hybrid histidine ki... 292 1e-76 ref|YP_002007709.1| hybrid sensor histidine kinase [Cupriavidus ... 290 3e-76 ref|ZP_04764294.1| histidine kinase [Acidovorax delafieldii 2AN]... 277 3e-72 ref|ZP_04586955.1| sensor histidine kinase CorS [Pseudomonas syr... 247 3e-63 gb|EGH61342.1| sensor histidine kinase CorS [Pseudomonas syringa... 246 4e-63 ref|ZP_08504855.1| Sensor protein [Methyloversatilis universalis... 238 2e-60 >ref|YP_003774654.1| composite two-component transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ62746.1| composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 604 Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/418 (99%), Positives = 416/418 (99%) Query: 1 VAHQIQVEQIRLLCGNLGSSVVPGILVALLIVYALGERAGLWPLLAWAGGVIVSKLIDFA 60 VAHQIQVEQIRLLCGNLGSSVVPGILVALLIVYALGERAGLWPLLAWAGGVIVSKLIDFA Sbjct: 17 VAHQIQVEQIRLLCGNLGSSVVPGILVALLIVYALGERAGLWPLLAWAGGVIVSKLIDFA 76 Query: 61 DARRILAMSITPQQIGAVRRQLMLLHGLDGAAWGALAAVALDTGSPGGSILAIGVLAGVA 120 DARRILAMSITPQQIGAVRR+LMLLHGLDGAAWGALAAVALDTGSPGGSILAIGVLAGVA Sbjct: 77 DARRILAMSITPQQIGAVRRRLMLLHGLDGAAWGALAAVALDTGSPGGSILAIGVLAGVA 136 Query: 121 GNSMSILSPVLPVFISFCIVELGMLAGWVWIMHDPSLQVLSAAALLYVASLLVQARNSAR 180 GNSMSILSPVLPVFISFCIVELGMLAGWVWIMHDPSLQVLSAAALLYVASLLVQARNSAR Sbjct: 137 GNSMSILSPVLPVFISFCIVELGMLAGWVWIMHDPSLQVLSAAALLYVASLLVQARNSAR 196 Query: 181 AAQAAITLRYENTELIRRLQHESERTQQALAQAEQANAAKSKFLAAASHDLRQPIHAQGL 240 AAQAAITLRYENTELIRRLQHESERTQQALAQAEQANAAKSKFLAAASHDLRQPIHAQGL Sbjct: 197 AAQAAITLRYENTELIRRLQHESERTQQALAQAEQANAAKSKFLAAASHDLRQPIHAQGL 256 Query: 241 FLEVLNTTPLDPMQRDVVAKLRRAADNCADMLHTLLDYSRIEAGVVEPQVTRFRVQALVG 300 FLEVLNTTPLDPMQRDVVAKLRRAADNCADMLHTLLDYSRIEAGVVEPQVTRFRVQALVG Sbjct: 257 FLEVLNTTPLDPMQRDVVAKLRRAADNCADMLHTLLDYSRIEAGVVEPQVTRFRVQALVG 316 Query: 301 RISQEMAAQAEAKGLVFRCRESRAVVSADASLTELILRNLVSNAIRYTDRGGILVACRQR 360 RISQEMAAQAEAKGLVFRCRESRAVVSADASLTELILRNLVSNAIRYTDRGGILVACRQR Sbjct: 317 RISQEMAAQAEAKGLVFRCRESRAVVSADASLTELILRNLVSNAIRYTDRGGILVACRQR 376 Query: 361 GGQAWLEVWDTGVGISAAQQQEIFEEFRQLGNPERDHRKGLGLGLAIAQGLARLQGIN 418 GGQAWLEVWDTG GISAAQQQEIFEEFRQLGNPERDHRKGLGLGLAIAQGLARLQG+ Sbjct: 377 GGQAWLEVWDTGAGISAAQQQEIFEEFRQLGNPERDHRKGLGLGLAIAQGLARLQGLT 434 >ref|YP_982911.1| integral membrane sensor hybrid histidine kinase [Polaromonas naphthalenivorans CJ2] gb|ABM37990.1| integral membrane sensor hybrid histidine kinase [Polaromonas naphthalenivorans CJ2] Length = 589 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 212/413 (51%), Positives = 289/413 (69%) Query: 4 QIQVEQIRLLCGNLGSSVVPGILVALLIVYALGERAGLWPLLAWAGGVIVSKLIDFADAR 63 + VEQ+RLLC N+GSSV+P ++ L+ + L + L W +SKL + A+ Sbjct: 12 HVLVEQVRLLCANVGSSVIPTFVLLGLLFWVLSGDVNVMWLGLWCALTALSKLCCWLHAK 71 Query: 64 RILAMSITPQQIGAVRRQLMLLHGLDGAAWGALAAVALDTGSPGGSILAIGVLAGVAGNS 123 R L+ ++ + + L++L+ LDGA WGAL VALD+ GS+L I VL GVA NS Sbjct: 72 RQLSRGVSVDSVPRLVWMLIVLNALDGAIWGALPWVALDSAHLAGSVLVIAVLTGVAANS 131 Query: 124 MSILSPVLPVFISFCIVELGMLAGWVWIMHDPSLQVLSAAALLYVASLLVQARNSARAAQ 183 MS+LSPVLPVF+ F I E+ ++++ DP+ L A LY A ++ QA N AR A+ Sbjct: 132 MSLLSPVLPVFVGFVIAEMIAGVSKLFLIGDPAYSALGIAGFLYFAIMMGQAINIARTAR 191 Query: 184 AAITLRYENTELIRRLQHESERTQQALAQAEQANAAKSKFLAAASHDLRQPIHAQGLFLE 243 +I LR+EN EL+ +L+ ++ + A +AE+ANAAKSKFLAAASHDLRQPIHAQGLFLE Sbjct: 192 TSIDLRFENIELMDQLRKKTAIAEAARHEAEEANAAKSKFLAAASHDLRQPIHAQGLFLE 251 Query: 244 VLNTTPLDPMQRDVVAKLRRAADNCADMLHTLLDYSRIEAGVVEPQVTRFRVQALVGRIS 303 VL + L QR+V+ R A+ ++ML+TLLD+SRI+AGVV P + F++Q L+ +I Sbjct: 252 VLGQSLLTAHQREVLDCARSASLASSEMLNTLLDFSRIDAGVVRPHIQPFQLQTLLHKIE 311 Query: 304 QEMAAQAEAKGLVFRCRESRAVVSADASLTELILRNLVSNAIRYTDRGGILVACRQRGGQ 363 ++A A+AKG+V+R RE+RA +++DA+L E+ILRNLVSNAIRYT+RGG+L+ CR+R Sbjct: 312 NDLAPLADAKGMVYRSRETRATINSDATLVEMILRNLVSNAIRYTERGGVLITCRKRRHL 371 Query: 364 AWLEVWDTGVGISAAQQQEIFEEFRQLGNPERDHRKGLGLGLAIAQGLARLQG 416 A +EVWDTG+GI+ QQ+IF EF QLGNPERD RKGLGLGLAIA GLA+ G Sbjct: 372 ALVEVWDTGIGIAFENQQDIFREFHQLGNPERDRRKGLGLGLAIADGLAKALG 424 >ref|YP_586986.1| two-component hybrid histidine kinase, periplasmic sensor [Cupriavidus metallidurans CH34] gb|ABF11717.1| putative two-component hybrid histidine kinase, periplasmic sensor [Cupriavidus metallidurans CH34] Length = 591 Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 180/421 (42%), Positives = 258/421 (61%), Gaps = 10/421 (2%) Query: 9 QIRLLCGNLGSSVVPGILVALLIVYALGERAGLWPLLAWAGGVIVSKLIDFADARRILAM 68 Q+ L+ + G +++ L A+++ L G + WA ++V I R + Sbjct: 18 QMELIDQSFGIAMLGCSLAAIILAVGLTVTGGHPGAMPWAAAMVVLCAIAHF-GRLAVPD 76 Query: 69 SITPQQIGAVRRQLMLLHGLDGAAWGALAAVALDTGSPGGSILAIGVLAGVAGNSMSILS 128 +T + G R + ++ L G+ WG +A + LD SP I + ++AG++ +++I S Sbjct: 77 RLTEARAGRYARAMTVMLVLIGSLWGLVAWLYLDIRSPAVVICVLSLIAGMSAAALAIFS 136 Query: 129 PVLPVFISFCIVELGMLAGWVWIM--HDPSLQVLSAAALLYVASLLVQARNSARAAQAAI 186 LPV I F I +L W+ + HD + + LY+ LL+ ARN +R A +I Sbjct: 137 ACLPVAIGFFIP--AILPVWIVFLLTHDIAYLPMFFGTPLYLVVLLIFARNYSRVACHSI 194 Query: 187 TLRYENTELIRRLQHESERTQQALAQAEQANAAKSKFLAAASHDLRQPIHAQGLFLEVLN 246 LR+EN ELI +L+ ++ R QAL +AE AN AKS FLA+ASHDLRQP+HA GLFL L Sbjct: 195 ALRFENVELISQLRDQTARAGQALREAENANRAKSVFLASASHDLRQPLHALGLFLVSLG 254 Query: 247 TTPLDPMQRDVVAKLRRAADNCADMLHTLLDYSRIEAGVVEPQVTRFRVQALVGRISQEM 306 TPLD QR ++ + ++ +ML+TLLD+S++EAGV+ + FR+Q ++ ++ E Sbjct: 255 RTPLDAHQRQLLDHIEASSGAAREMLNTLLDFSKLEAGVITARPRPFRLQPMLHKLENEF 314 Query: 307 AAQAEAKGLVFRCRESRAVVSADASLTELILRNLVSNAIRYTDRGGILVACRQRGGQAWL 366 A QA A+GLV+R R++ A + D +L ELILRNL++NAIRYT GG+L+ACR R A + Sbjct: 315 APQANARGLVYRTRDTTATLFGDPALVELILRNLIANAIRYTHTGGVLIACRPRRFHASI 374 Query: 367 EVWDTGVGISAAQQQEIFEEFRQLGNPERDHRKGLGLGLAIAQGLARLQGINSNNNCITL 426 EVWDTG+GI AQ +EIF EF QLGNPERD RKGLGLGLAI GLAR + +TL Sbjct: 375 EVWDTGIGIPIAQHREIFREFHQLGNPERDQRKGLGLGLAIVDGLAR-----TMQTRVTL 429 Query: 427 D 427 D Sbjct: 430 D 430 >ref|YP_004681300.1| RpfC family transcriptional regulator [Cupriavidus necator N-1] gb|AEI80068.1| transcriptional regulator RpfC family [Cupriavidus necator N-1] Length = 610 Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 176/410 (42%), Positives = 255/410 (62%), Gaps = 11/410 (2%) Query: 9 QIRLLCGNLGSSVVPGILVALLIVYAL---GERAGLWPLLAWAGGVIVSKLIDFADARRI 65 Q+ L+ + S+++ L A ++ L G R G P WA + ++ I + R Sbjct: 27 QMTLIDQSFSSAMLGCSLAAFILATGLTLTGNRPGALP---WACAMALACAIAYFGRLR- 82 Query: 66 LAMSITPQQIGAVRRQLMLLHGLDGAAWGALAAVALDTGSPGGSILAIGVLAGVAGNSMS 125 L ++ G R + + L GA WG +A + LD P I + ++AG++ +++ Sbjct: 83 LPGRLSEAGAGRYARGMTAMLTLIGALWGLVAWLYLDVRQPAVVICVLSLIAGMSAAALA 142 Query: 126 ILSPVLPVFISFCIVELGMLAGWVWIMHDPSLQVLSA--AALLYVASLLVQARNSARAAQ 183 + S LPV I F + ++ W+ + ++ L LY+ LLV ARN AR A+ Sbjct: 143 VFSACLPVAIGFFLP--AIVPVWIAFLATGDIEYLPMFLGTPLYLCVLLVFARNYARVAR 200 Query: 184 AAITLRYENTELIRRLQHESERTQQALAQAEQANAAKSKFLAAASHDLRQPIHAQGLFLE 243 AI LR+EN ELI +L+ ++ R + A AE A+ AKS FLA+ASHDLRQP+HA GLFL Sbjct: 201 HAIALRFENVELISQLREQTARAEAAQHAAEDASRAKSVFLASASHDLRQPLHAMGLFLV 260 Query: 244 VLNTTPLDPMQRDVVAKLRRAADNCADMLHTLLDYSRIEAGVVEPQVTRFRVQALVGRIS 303 L T LD QR +VA + ++ +ML++LLD+S++EAGV+ P+ FR+Q L+ ++ Sbjct: 261 SLGRTGLDERQRQLVAHIEASSSAAREMLNSLLDFSKLEAGVITPRARAFRLQPLLHKLE 320 Query: 304 QEMAAQAEAKGLVFRCRESRAVVSADASLTELILRNLVSNAIRYTDRGGILVACRQRGGQ 363 E A QA+A+GLV+R R++ A++ D +L EL+LRNL++NAIRY+ +GG+LVACR R Sbjct: 321 NEFAPQADARGLVYRTRDTTAMLYGDPTLVELVLRNLIANAIRYSRQGGVLVACRMRRLH 380 Query: 364 AWLEVWDTGVGISAAQQQEIFEEFRQLGNPERDHRKGLGLGLAIAQGLAR 413 A +EVWDTG+GI AAQ ++IF EF QLGNPERD RKGLGLGLAI GLAR Sbjct: 381 AVVEVWDTGIGIPAAQHRDIFREFHQLGNPERDQRKGLGLGLAIVDGLAR 430 >ref|YP_001766581.1| integral membrane sensor hybrid histidine kinase [Methylobacterium radiotolerans JCM 2831] gb|ACB27779.1| integral membrane sensor hybrid histidine kinase [Methylobacterium radiotolerans JCM 2831] Length = 621 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 170/409 (41%), Positives = 250/409 (61%) Query: 4 QIQVEQIRLLCGNLGSSVVPGILVALLIVYALGERAGLWPLLAWAGGVIVSKLIDFADAR 63 +I EQ+RL+ + SV G LV+ L++ L E LL W G +V + A AR Sbjct: 8 RIAAEQLRLVLDGVTQSVAVGFLVSTLMLAVLWELVPHAVLLGWYGAFLVERFGAAAYAR 67 Query: 64 RILAMSITPQQIGAVRRQLMLLHGLDGAAWGALAAVALDTGSPGGSILAIGVLAGVAGNS 123 R+ P V R + ++GA G+L +AL P SIL + +L N Sbjct: 68 RVREAVGEPDCARRVERVVFASKIVEGAILGSLIWIALPLQIPAVSILTMSLLGATCSNG 127 Query: 124 MSILSPVLPVFISFCIVELGMLAGWVWIMHDPSLQVLSAAALLYVASLLVQARNSARAAQ 183 +S+L+P ++++ + + AG +W + + L+ ++L+V Q ++R + Sbjct: 128 VSLLAPRRHLYLALVVPVAVLAAGTLWSLGGAPYRALAVCSILFVVGQYGQVVLASRRVR 187 Query: 184 AAITLRYENTELIRRLQHESERTQQALAQAEQANAAKSKFLAAASHDLRQPIHAQGLFLE 243 +I LR+EN L+ +L+ ES +A AE AN AKS+FLAAASHDLRQP+HAQGLFL+ Sbjct: 188 ESIELRFENAALVEQLRAESAAAHRARRDAEHANTAKSQFLAAASHDLRQPVHAQGLFLQ 247 Query: 244 VLNTTPLDPMQRDVVAKLRRAADNCADMLHTLLDYSRIEAGVVEPQVTRFRVQALVGRIS 303 L+ T L QR ++ + A DML+TLLD+SR+EAGV+ P+ F +Q L+ +I Sbjct: 248 ALSQTDLAAPQRRILQNAQTANVASTDMLNTLLDFSRLEAGVITPRRRAFELQPLLDKIE 307 Query: 304 QEMAAQAEAKGLVFRCRESRAVVSADASLTELILRNLVSNAIRYTDRGGILVACRQRGGQ 363 ++A A+AK L++R ++ + +DA+L EL+LRNLV NAIRYT+RGG+L+ CR+RG Sbjct: 308 NDLAHLADAKRLIYRTPQTDLAIVSDAALLELVLRNLVLNAIRYTERGGVLIGCRRRGAG 367 Query: 364 AWLEVWDTGVGISAAQQQEIFEEFRQLGNPERDHRKGLGLGLAIAQGLA 412 +EV+DTG+GI Q+++IF EF QLGNPERD KGLGLGLAIA+G+A Sbjct: 368 VSIEVYDTGIGIPVDQREDIFREFYQLGNPERDRHKGLGLGLAIARGIA 416 >ref|YP_002007709.1| hybrid sensor histidine kinase [Cupriavidus taiwanensis LMG 19424] emb|CAQ71652.1| putative hybrid sensor histidine kinase [Cupriavidus taiwanensis LMG 19424] Length = 613 Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 157/328 (47%), Positives = 222/328 (67%), Gaps = 4/328 (1%) Query: 88 LDGAAWGALAAVALDTGSPGGSILAIGVLAGVAGNSMSILSPVLPVFISFCIVELGMLAG 147 L GA WG +A + LD P I + ++AG++ ++++ S LPV I F + ++ Sbjct: 110 LIGALWGLVAWLYLDVRLPAVVICILSLIAGMSAAALAVFSACLPVAIGFFVP--AIVPV 167 Query: 148 WVWIMHDPSLQVLSA--AALLYVASLLVQARNSARAAQAAITLRYENTELIRRLQHESER 205 W+ + ++ L LY+ LLV ARN A A+ +I LR+EN ELI +L+ ++ R Sbjct: 168 WIAFLATGDIEYLPMFLGTPLYLCVLLVFARNYAHVARQSIALRFENVELISQLREQTAR 227 Query: 206 TQQALAQAEQANAAKSKFLAAASHDLRQPIHAQGLFLEVLNTTPLDPMQRDVVAKLRRAA 265 + A AE+A+ AKS FLA+ASHDLRQP+HA GLFL L T LD QR ++A + ++ Sbjct: 228 AEAAQHAAEEASRAKSVFLASASHDLRQPLHAMGLFLVSLGRTCLDERQRQLLAHIEASS 287 Query: 266 DNCADMLHTLLDYSRIEAGVVEPQVTRFRVQALVGRISQEMAAQAEAKGLVFRCRESRAV 325 +ML++LLD+S++EAGV+ P+ FR+Q L+ ++ E A QAEA+GLV+R R++ Sbjct: 288 GAAREMLNSLLDFSKLEAGVITPRARAFRLQPLLHKLENEFAPQAEARGLVYRTRDTTVT 347 Query: 326 VSADASLTELILRNLVSNAIRYTDRGGILVACRQRGGQAWLEVWDTGVGISAAQQQEIFE 385 + D +L EL+LRNL+SNAIRYT +GG+LVACR+RG +A +EVWDTG+GI +AQ ++IF Sbjct: 348 LHGDPTLVELVLRNLISNAIRYTQQGGVLVACRKRGVRATIEVWDTGIGIPSAQHRDIFR 407 Query: 386 EFRQLGNPERDHRKGLGLGLAIAQGLAR 413 EF QL NPERD RKGLGLGLAI GLAR Sbjct: 408 EFHQLDNPERDQRKGLGLGLAIVDGLAR 435 >ref|ZP_04764294.1| histidine kinase [Acidovorax delafieldii 2AN] gb|EER58898.1| histidine kinase [Acidovorax delafieldii 2AN] Length = 600 Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 172/429 (40%), Positives = 249/429 (58%), Gaps = 14/429 (3%) Query: 8 EQIRLLCGNLGSSVVPGILVALLIVYALGERAGLWPLLAWAGGVIVSKLIDFADARRILA 67 EQ+ LL N +++ + +L ++ + A + AW +VS ++ L Sbjct: 7 EQVALLRQNFPMTLLASLATSLGTLWVMARVADGQAMAAW----LVSHVLVVTGVYLSL- 61 Query: 68 MSITPQQIGA--VRRQLMLLHGLDGAAWGALAAVALDTGSPGGSILAIGVLAGVAGNSMS 125 SI PQ A R+L+ G +WG L V + G+ I AIG+++ V+ ++ Sbjct: 62 RSIHPQTAPAQSAARKLIACMAAMGLSWGGLGLVVMHWGNSDSVIYAIGIVSTVSSGALG 121 Query: 126 ILSPVLPVFISFCIVELGMLAGWVWIMHDPSLQVLSAAALLYVASLLVQARNSARAAQAA 185 + +P+ ++++ +G + + + P L L+Y +QAR + A + + Sbjct: 122 LGAPLYRAYLTYLSCAIGGVLIAIALAGGPVLWPALFLTLVYYGLTCMQARTADAATRRS 181 Query: 186 ITLRYENTELIRRLQHESERTQQALAQAEQANAAKSKFLAAASHDLRQPIHAQGLFLEVL 245 I L+ EN L+ RL+ ES+R A AE+A+ KS+FLAAASHDLRQP+HA GLFLE L Sbjct: 182 IALKLENQRLVARLRAESQRALAAQKIAEKADHDKSRFLAAASHDLRQPLHAMGLFLETL 241 Query: 246 NTTPLDPMQRDVVAKLRRAADNCADMLHTLLDYSRIEAGVVEPQVTRFRVQALVGRISQE 305 +PL+ QR V+ A+ A+ML TLLDYSR+EAGVV+ + F VQ L+ + QE Sbjct: 242 QRSPLNDRQRTVLGHAHAASSAAAEMLTTLLDYSRLEAGVVKARPAAFAVQPLLTALEQE 301 Query: 306 MAAQAEAKGLVFRCRESRAVVSADASLTELILRNLVSNAIRYTDRGGILVACRQRGGQAW 365 QA+ GLV+R RE+ A AD SL L++ N +SNA+RYT RGG+L+ACR+RG + Sbjct: 302 FGVQADNAGLVYRTRETSAASHADRSLVGLVMHNFISNALRYTARGGVLIACRRRGRRLA 361 Query: 366 LEVWDTGVGISAAQQQEIFEEFRQLGNPERDHRKGLGLGLAIAQGLARLQGINSNNNCIT 425 LEVWDTG+GI + Q +IF+EF QLGNPERD RKGLGLGLAI Q L + G T Sbjct: 362 LEVWDTGIGIPSHQWDDIFQEFHQLGNPERDRRKGLGLGLAIVQRLVQAMG-------TT 414 Query: 426 LDVRRPCGR 434 +++R GR Sbjct: 415 VELRSRPGR 423 >ref|ZP_04586955.1| sensor histidine kinase CorS [Pseudomonas syringae pv. oryzae str. 1_6] ref|YP_003778213.1| sensor histidine kinase CorS [Pseudomonas syringae pv. tomato str. DC3000] gb|ADD53004.1| sensor histidine kinase CorS [Pseudomonas syringae pv. tomato str. DC3000] gb|EGI01402.1| sensor histidine kinase CorS [Pseudomonas syringae pv. oryzae str. 1_6] Length = 491 Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 157/432 (36%), Positives = 239/432 (55%), Gaps = 23/432 (5%) Query: 8 EQIRLLCGNLGSSVVPGILVA--LLIVY-------------ALGERAGLWP-------LL 45 E +RL+ L S+V L+A L++ + AL + +G W LL Sbjct: 10 EALRLILVELTQSLVKTTLLATSLILTFSLIDGFQARVSWSALAQLSGDWDPDAIQTQLL 69 Query: 46 AWAGGVIVSKLIDFADARRILAMSITPQQIGAVRRQLMLLHGLDGAAWGALAAVALDTGS 105 W V+ ++ AR++L + + ++ V R LML L+ W L +AL Sbjct: 70 LWYVAVVSLRVGQVIYARQVLLLRLDAGRVKPVARVLMLAGILESVVWVILCEIALQQAF 129 Query: 106 PGGSILAIGVLAGVAGNSMSILSPVLP-VFISFCIVELGMLAGWVWIMHDPSLQVLSAAA 164 P I + VL G++M L+ +P +++ ++ + ++A W + D ++L Sbjct: 130 PTPFIGLLLVLFATLGHAMVSLNCAVPSLYLGRILLPVALIAMWFLRIGDDLHRILGITV 189 Query: 165 LLYVASLLVQARNSARAAQAAITLRYENTELIRRLQHESERTQQALAQAEQANAAKSKFL 224 LLY L AR+ + + + E +R + + ++ + AL +A Q+N A+ + L Sbjct: 190 LLYGLGLCRLARSGCQHLVKQLKRQLLLDETAKRARRDLQQLRIALQRARQSNTARCQLL 249 Query: 225 AAASHDLRQPIHAQGLFLEVLNTTPLDPMQRDVVAKLRRAADNCADMLHTLLDYSRIEAG 284 A ASHDLRQP+ AQG FL L +PLDP QR ++ + R A DML+TLLD SRIE G Sbjct: 250 AGASHDLRQPLQAQGFFLAALAGSPLDPQQRQLLVRARTAVKTTTDMLNTLLDLSRIELG 309 Query: 285 VVEPQVTRFRVQALVGRISQEMAAQAEAKGLVFRCRESRAVVSADASLTELILRNLVSNA 344 ++P + F +Q L+ ++ E+A A KGL +R ++ + +D +L ELILRNL+ NA Sbjct: 310 ALQPTLQVFALQPLLDKLEMELAPLANGKGLSYRTLDTELLSLSDPTLLELILRNLIGNA 369 Query: 345 IRYTDRGGILVACRQRGGQAWLEVWDTGVGISAAQQQEIFEEFRQLGNPERDHRKGLGLG 404 IRYT RGG+L+AC++R G +EV DTGVGI+ QQEIF +F QL +P R++ +GLGLG Sbjct: 370 IRYTLRGGVLIACQRRHGYLQIEVVDTGVGIALQHQQEIFRDFHQLDHPTRNNHEGLGLG 429 Query: 405 LAIAQGLARLQG 416 LAI LARL G Sbjct: 430 LAIVARLARLLG 441 >gb|EGH61342.1| sensor histidine kinase CorS [Pseudomonas syringae pv. maculicola str. ES4326] Length = 491 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 157/432 (36%), Positives = 238/432 (55%), Gaps = 23/432 (5%) Query: 8 EQIRLLCGNLGSSVVPGILVA--LLIVY-------------ALGERAGLWP-------LL 45 E +RL+ L S+V L+A L++ + AL + +G W LL Sbjct: 10 EALRLILVELTQSLVKTTLLATSLILTFSLIDGFQARVSWSALAQLSGDWDPDAIQTQLL 69 Query: 46 AWAGGVIVSKLIDFADARRILAMSITPQQIGAVRRQLMLLHGLDGAAWGALAAVALDTGS 105 W V+ ++ AR++L + + ++ V R LML L+ W L +AL Sbjct: 70 LWYVAVVSLRVGQVIYARQVLLLRLDAGRVKPVARVLMLAGILESVVWVILCEIALQQAF 129 Query: 106 PGGSILAIGVLAGVAGNSMSILSPVLP-VFISFCIVELGMLAGWVWIMHDPSLQVLSAAA 164 P I + VL G++M L+ +P +++ ++ + ++A W + D ++L Sbjct: 130 PTPFIGLLLVLFATLGHAMVSLNCAVPSLYLGRILLPVALIAMWFLRIGDDLHRILGITV 189 Query: 165 LLYVASLLVQARNSARAAQAAITLRYENTELIRRLQHESERTQQALAQAEQANAAKSKFL 224 LLY L AR+ + + + E +R + + ++ + AL +A Q+N A+ + L Sbjct: 190 LLYGLGLCRLARSGCQHLVKQLKRQLLLDETAKRARRDLQQLRIALQRARQSNTARCQLL 249 Query: 225 AAASHDLRQPIHAQGLFLEVLNTTPLDPMQRDVVAKLRRAADNCADMLHTLLDYSRIEAG 284 A ASHDLRQP+ AQG FL L PLDP QR ++ + R A DML+TLLD SRIE G Sbjct: 250 AGASHDLRQPLQAQGFFLAALAGCPLDPQQRQLLVRARTAVKTTTDMLNTLLDLSRIELG 309 Query: 285 VVEPQVTRFRVQALVGRISQEMAAQAEAKGLVFRCRESRAVVSADASLTELILRNLVSNA 344 ++P + F +Q L+ ++ E+A A KGL +R ++ + +D +L ELILRNL+ NA Sbjct: 310 ALQPTLQVFALQPLLDKLEMELAPLANGKGLSYRTLDTELLSLSDPTLLELILRNLIGNA 369 Query: 345 IRYTDRGGILVACRQRGGQAWLEVWDTGVGISAAQQQEIFEEFRQLGNPERDHRKGLGLG 404 IRYT RGG+L+AC++R G +EV DTGVGI+ QQEIF +F QL +P R++ +GLGLG Sbjct: 370 IRYTLRGGVLIACQRRHGYLQIEVVDTGVGIALQHQQEIFRDFHQLDHPTRNNHEGLGLG 429 Query: 405 LAIAQGLARLQG 416 LAI LARL G Sbjct: 430 LAIVARLARLLG 441 >ref|ZP_08504855.1| Sensor protein [Methyloversatilis universalis FAM5] gb|EGK71680.1| Sensor protein [Methyloversatilis universalis FAM5] Length = 620 Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 155/417 (37%), Positives = 227/417 (54%), Gaps = 12/417 (2%) Query: 4 QIQVEQIRLLCGNLGSSVVPGILVALLIVYALGERAGLWPLLAWAGGVI---VSKLIDFA 60 ++ QI++L NLG++ IL LL+ + + + A LW ++ W I +S+L Sbjct: 41 EVVATQIQMLYANLGTAFGGQILGTLLVAWTVYDAAPLWTVVLWFVASIANQLSRLTLLR 100 Query: 61 DARRILAMSITPQQIGAVRRQLMLLHG--LDGAAWGALAAVALDTGSPGGSILAIGVLAG 118 RR P A R L G + G W + + +P I+ + +L Sbjct: 101 SYRRT-----APDAASAPRWGTYWLIGAAISGVLWSSTLWLFFSPEAPEQQIVLMSLLVS 155 Query: 119 VAGNSMSILSPVLPVFISFC-IVELGMLAGWVWIMHDPSLQVLSAAALLYVASLLVQARN 177 V G + ++ S LP + +F L ++A ++W L V ++L +A L +N Sbjct: 156 VCGVAAALTSMHLPSYYTFLGATLLPVIARYIWEGSRHDLLVAFIVSVLMIA-LWRVGKN 214 Query: 178 SARAAQAAITLRYENTELIRRLQHESERTQQALAQAEQANAAKSKFLAAASHDLRQPIHA 237 + A+ RY N L RRL+ ++ +A +A+QA+ AKS+F AAASHDLRQP+HA Sbjct: 215 FNALIERALRSRYANEVLSRRLESQNVELSEARDRADQASRAKSQFFAAASHDLRQPLHA 274 Query: 238 QGLFLEVLNTTPLDPMQRDVVAKLRRAADNCADMLHTLLDYSRIEAGVVEPQVTRFRVQA 297 GLF L+ +P ++V + + + + + LLD S+I+AG V+P+VT V A Sbjct: 275 MGLFAAALSAKAHEPEVANLVTSISSSVEALEGLFNELLDISKIDAGKVKPEVTDVSVSA 334 Query: 298 LVGRISQEMAAQAEAKGLVFRCRESRAVVSADASLTELILRNLVSNAIRYTDRGGILVAC 357 L R+ + +A +GL FR R A V +D L E ILRNL+SNA+RYT GG+LV+ Sbjct: 335 LFDRLRMDFEPEAFERGLSFRIRSRAAWVRSDPVLLERILRNLISNAMRYTPAGGVLVST 394 Query: 358 RQRGGQAWLEVWDTGVGISAAQQQEIFEEFRQLGNPERDHRKGLGLGLAIAQGLARL 414 R RGG+ EVWDTG+GI+ Q IFEEF QL N ERD RKGLGLGL+I Q L+ L Sbjct: 395 RMRGGRLRFEVWDTGMGIAPEDQTRIFEEFVQLANAERDRRKGLGLGLSIVQRLSGL 451