BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0271.p (574 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774675.1| methyl-accepting chemotaxis I (serine chemor... 1142 0.0 ref|YP_002551838.1| methyl-accepting chemotaxis sensory transduc... 429 e-118 ref|YP_315378.1| methyl-accepting chemotaxis sensory transducer ... 424 e-116 ref|YP_546262.1| methyl-accepting chemotaxis sensory transducer ... 423 e-116 ref|YP_314418.1| chemotaxis sensory transducer [Thiobacillus den... 420 e-115 ref|YP_001354515.1| methyl-accepting chemotaxis protein [Janthin... 420 e-115 ref|YP_984693.1| methyl-accepting chemotaxis sensory transducer ... 419 e-115 ref|YP_315380.1| methyl-accepting chemotaxis sensory transducer ... 418 e-114 ref|ZP_08404611.1| methyl-accepting chemotaxis sensory transduce... 418 e-114 ref|YP_001101318.1| methyl-accepting chemotaxis protein [Hermini... 417 e-114 >ref|YP_003774675.1| methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62767.1| methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 574 Score = 1142 bits (2954), Expect = 0.0, Method: Compositional matrix adjust. Identities = 571/574 (99%), Positives = 571/574 (99%) Query: 1 MIQRLKIGSRLAFGFCLILLLATAILLIGLWRMAELEAASEYVIDEKVAAMTAALNMREA 60 MIQRLKIGSRLAFGFCLILLLATAILLIGLWRMAELEAASEYVIDEKVAAMTAALNMREA Sbjct: 1 MIQRLKIGSRLAFGFCLILLLATAILLIGLWRMAELEAASEYVIDEKVAAMTAALNMREA 60 Query: 61 GSQLALALRKVVTPTDAAEGKAEDAHLSKILQAYAGFEKQITELSPAGRGKELLTAASGQ 120 GSQLALALRKVVTPTDAAEGKAEDAHLSKILQAYAGFEKQITELSPAGRGKELLTAASGQ Sbjct: 61 GSQLALALRKVVTPTDAAEGKAEDAHLSKILQAYAGFEKQITELSPAGRGKELLTAASGQ 120 Query: 121 SKQLFPIVETIRQQVASNNYFDAAQLLKSDFLPAHDKWMASVGALAAFQQEDMKAAHAEA 180 SKQLFPIVETIRQQVASNNYFDAAQLLKSDFLPAHDKWMASVGALAAFQQEDMKAAHAEA Sbjct: 121 SKQLFPIVETIRQQVASNNYFDAAQLLKSDFLPAHDKWMASVGALAAFQQEDMKAAHAEA 180 Query: 181 KDSYRKAQIGMLLMGVLTLGLGFFFTFVITRSIVRPLKRAGNIAETISRGDLTQDFHDHG 240 KDSYRKAQIGMLLMGVLTLGLGFFFTFVITRSIV PLKRAGNIAETISRGDLTQDFHDHG Sbjct: 181 KDSYRKAQIGMLLMGVLTLGLGFFFTFVITRSIVGPLKRAGNIAETISRGDLTQDFHDHG 240 Query: 241 RDEAATMVNALEAMQTNLAATLNEVKESAAVIAVASHEIARGNVDLSNRTESQASSLEET 300 RDEAATMVNALEAMQTNLAATLNEVKESAAVIAVASHEIARGNVDLSNRTESQASSLEET Sbjct: 241 RDEAATMVNALEAMQTNLAATLNEVKESAAVIAVASHEIARGNVDLSNRTESQASSLEET 300 Query: 301 ASSMEQLTSTVQQNAENARQANQLVVSASDYATKGGRVVGDVVATMGSIKESSSKIVDII 360 ASSMEQLTSTVQQNAENARQANQLVVSASDYATKGGRVVGDVVATMGSIKESSSKIVDII Sbjct: 301 ASSMEQLTSTVQQNAENARQANQLVVSASDYATKGGRVVGDVVATMGSIKESSSKIVDII 360 Query: 361 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQRSAAAAKEIKGLISDSV 420 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQRSAAAAKEIKGLISDSV Sbjct: 361 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQRSAAAAKEIKGLISDSV 420 Query: 421 EKVDAGGKLVDEAGATMSEIVTSVKHVADIMGEITAASQEQSAGIAEVNHAITQIDEITQ 480 EKVDAGGKLVDEAGATMSEIVTSVKHVADIMGEITAASQEQSAGIAEVNHAITQIDEITQ Sbjct: 421 EKVDAGGKLVDEAGATMSEIVTSVKHVADIMGEITAASQEQSAGIAEVNHAITQIDEITQ 480 Query: 481 QNAALVEQAAAAAESLQEQADVLARAVAVFRLKTAQAQGSIPTPPPVPAPPAPLRTVNAP 540 QNAALVEQAAAAAESLQEQADVLARAVAVFRLKTAQAQGSIPTPPPVPAPPAPLRTVN P Sbjct: 481 QNAALVEQAAAAAESLQEQADVLARAVAVFRLKTAQAQGSIPTPPPVPAPPAPLRTVNTP 540 Query: 541 AAVTATRPVASLPAAAPAKRKPAALARDDEFEEF 574 AAVTATRPVASLPAAAPAKRKPAAL RDDEFEEF Sbjct: 541 AAVTATRPVASLPAAAPAKRKPAALTRDDEFEEF 574 >ref|YP_002551838.1| methyl-accepting chemotaxis sensory transducer [Acidovorax ebreus TPSY] gb|ACM31838.1| methyl-accepting chemotaxis sensory transducer [Acidovorax ebreus TPSY] Length = 578 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 272/590 (46%), Positives = 372/590 (63%), Gaps = 31/590 (5%) Query: 2 IQRLKIGSRLAFGFCLILLLATAILLIGLWRMAELEAASEYVIDEKVAAMTAALNMREAG 61 + LK+G+RLA F L+LL+ I +G+WR+ EL + + + + AA R+A Sbjct: 3 LSNLKVGTRLALSFGLVLLITVVIAAVGIWRLQELASVTHQLTSTDNERLRAASTWRQAI 62 Query: 62 SQLALALRKVVTPTDAAEGKAEDAHLSKILQAYAGFEKQITELSPAGRGKELLTAASGQS 121 + R + D + + + ++K + + ++ + L G+ LL A ++ Sbjct: 63 DLNWVRTRAAILDADTSHLSSWQSEIAKTSEEASKAQEVVERLVTTDEGRRLL-ADIAKT 121 Query: 122 KQLF--PIVETIRQQVASNNYFDAAQLLKSDFLPAHDKWMASVGALAAFQQEDMKAAHAE 179 ++ + P E ++++ A + +LL S P D ++ S+ A+ ++ +A + Sbjct: 122 REAYRGPRAELLKRKAAGESV---GELLDSQLKPLADAYLQSIVAM----EQRQRALYES 174 Query: 180 AKDSY-RKAQIGMLLMGVLT---LGLGFFFTFVITRSIVRPLKRAGNIAETISRGDLTQD 235 +D+ ++A + ++ V+T L +G +++RS+ PL+ A A I+ GDLTQ Sbjct: 175 TRDNAAKQATLSRAILMVVTAVALLVGAGAAILLSRSVTGPLQLAVRGAGLIAEGDLTQS 234 Query: 236 FHDHGRDEAATMVNALEAMQTNLAATLNEVKESAAVIAVASHEIARGNVDLSNRTESQAS 295 HGRDEAA ++ AL MQ NLA + V+ +A +A AS EI++GN DLS RTESQAS Sbjct: 235 IQAHGRDEAAALLKALGHMQGNLARVVAGVRANAESVASASAEISQGNHDLSGRTESQAS 294 Query: 296 SLEETASSMEQLTSTVQQNAENARQANQLVVSASDYATKGGRVVGDVVATMGSIKESSSK 355 +LEETA+SMEQL +TV+QNA+NARQANQL ++AS A +GG VV +VV TM I ESS K Sbjct: 295 ALEETAASMEQLGATVRQNADNARQANQLAMNASTVAVQGGEVVSEVVDTMRGINESSRK 354 Query: 356 IVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQRSAAAAKEIKGL 415 I DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRALAQRSA AAKEIK L Sbjct: 355 IADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRALAQRSAEAAKEIKQL 414 Query: 416 ISDSVEKVDAGGKLVDEAGATMSEIVTSVKHVADIMGEITAASQEQSAGIAEVNHAITQI 475 I+ SVE+V+ G +LVD+AGATM+E+VT+++ V DIMGEI+AAS EQSAG+A+V AITQ+ Sbjct: 415 ITASVERVEQGSQLVDKAGATMTEVVTAIRRVTDIMGEISAASSEQSAGVAQVGEAITQM 474 Query: 476 DEITQQNAALVEQAAAAAESLQEQADVLARAVAVFRLKTAQAQGSIPTPPPVPAPPAPLR 535 D+ TQQNAALVE+ AAAA SL QA L AVAVF+L + + P P P AP Sbjct: 475 DQATQQNAALVEEMAAAASSLSGQARELVEAVAVFKLASHGHALATPAAIRTPQPSAPAV 534 Query: 536 TVNA-----------PAAVTATRPVASLPAAAPAKRKPAALARDDEFEEF 574 T A PAA A RPV++ P AAPA P+ A D +E F Sbjct: 535 TRAAPPARPASAPVQPAARQA-RPVSASPKAAPA---PS--ADDGAWESF 578 >ref|YP_315378.1| methyl-accepting chemotaxis sensory transducer [Thiobacillus denitrificans ATCC 25259] gb|AAZ97573.1| chemotaxis sensory transducer [Thiobacillus denitrificans ATCC 25259] Length = 559 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 279/578 (48%), Positives = 363/578 (62%), Gaps = 27/578 (4%) Query: 5 LKIGSRLAFGFCLILLLATAILLIGLWRMAELEAASEYVIDEKVAAMTAALNMREAGSQL 64 +KIG+RL GF +LLL + +IG+WR+ + ++ ++ + M A + E S + Sbjct: 1 MKIGARLGLGFASVLLLLVVVAVIGVWRLQTVGMMTDSLVKNE---MHKARIINEWESII 57 Query: 65 ALALRKVVTPTDAAEGKAEDAHLSKILQAYAG---FEKQITELSPAGRGKELLTAASGQS 121 + + + E + A G +KQ+ L + L A + + Sbjct: 58 NANAVRALAAAKTNNPETEKFFVDASAAASKGGIALQKQLESLLTDAESRALFAAIADKR 117 Query: 122 KQLFPIVETIRQQVASNNYFDAAQLLKSDFLPAHDKWMASVGALAAFQQEDMKAAHAEAK 181 + ++ A+ N A + + D P D ++ S+ LA +Q++ A A A Sbjct: 118 SAYLAARDAALKEKAAGNVLGAKKFVDEDMKPRLDAYLESLHDLARYQKQ---AIDATAG 174 Query: 182 DSYRKAQIG-MLLMG--VLTLGLGFFFTFVITRSIVRPLKRAGNIAETISRGDLTQDFHD 238 + +R+ + G MLL+G ++ L +G F F ITRSI RP+ +A +A+T++ GDLT Sbjct: 175 NIHRQYESGRMLLIGLSIVALMMGIGFAFWITRSITRPMNQAVKVAQTVAAGDLTSRIEV 234 Query: 239 HGRDEAATMVNALEAMQTNLAATLNEVKESAAVIAVASHEIARGNVDLSNRTESQASSLE 298 G+DE ++ AL+ M +L + +V+ IA AS EIA GN+DLS+RTE QASSLE Sbjct: 235 EGKDETGRLLQALKDMNDSLVKIVGQVRLGTDAIATASSEIATGNLDLSSRTEEQASSLE 294 Query: 299 ETASSMEQLTSTVQQNAENARQANQLVVSASDYATKGGRVVGDVVATMGSIKESSSKIVD 358 ETASSMEQLTSTV+QNA++ARQANQ+ VSAS+ A KGG VV VV TMGSI ESS KIVD Sbjct: 295 ETASSMEQLTSTVKQNADHARQANQMAVSASEVAVKGGAVVAQVVDTMGSINESSRKIVD 354 Query: 359 IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQRSAAAAKEIKGLISD 418 II VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSA AAKEIK LI D Sbjct: 355 IIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAGAAKEIKTLIGD 414 Query: 419 SVEKVDAGGKLVDEAGATMSEIVTSVKHVADIMGEITAASQEQSAGIAEVNHAITQIDEI 478 SVEK D G KLV +AGATM EIV SVK V DIMGEITAASQEQSAGI +VN AI Q+DE+ Sbjct: 415 SVEKADIGSKLVGQAGATMDEIVASVKRVTDIMGEITAASQEQSAGIEQVNQAIAQMDEV 474 Query: 479 TQQNAALVEQAAAAAESLQEQADVLARAVAVFRLKTAQAQG--SIPTPPPVPAPPAPLRT 536 TQQNAALVE+AAAAA S+Q+QA LA AV+VFRL Q + + + A PA RT Sbjct: 475 TQQNAALVEEAAAAASSMQDQAANLAEAVSVFRLAGVNTQRPEQLTSNERIAALPA--RT 532 Query: 537 VNAPAAVTATRPVASLPAAAPAKRKPAALARDDEFEEF 574 A A V T+ +A++ ++ E+EEF Sbjct: 533 HTAAAPVVRTKKLAAIQGSSGG-----------EWEEF 559 >ref|YP_546262.1| methyl-accepting chemotaxis sensory transducer [Methylobacillus flagellatus KT] gb|ABE50421.1| methyl-accepting chemotaxis sensory transducer [Methylobacillus flagellatus KT] Length = 569 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 268/576 (46%), Positives = 365/576 (63%), Gaps = 18/576 (3%) Query: 5 LKIGSRLAFGFCLILLLATAILLIGLWRMAELEAASEYVIDEKVAAMTAALNMREAGSQL 64 L+IG RL GF +ILLL ++ GL ++A + + ++ V++ ++ +Q Sbjct: 6 LRIGVRLGAGFAVILLLMMIMVAFGLAQLANVGSTAKQVVETELKKERITTEWVSNATQN 65 Query: 65 ALALRKVVTPTDAAEGKAEDAHLSKILQAYAGFEKQITEL--SPAGRGKELLTAASGQSK 122 L + +DAA +++ +A ++Q+ L P G+ K A + + Sbjct: 66 GLRTLAAIKSSDAAMYDMYIQQIAETARANDSLKQQLETLLVKPEGKAK---FADAKEKA 122 Query: 123 QLFPIVETIRQQVASNNYFDAAQLLKSD----FLPAHDKWMASVGALAAFQQEDMKAAHA 178 F V + Q+ + A L++ + FLPA + S+ L F++ + A A Sbjct: 123 DAFSKVRSELLQLRKDGA--EASLIEKNVQEVFLPARKAYFDSMNELLEFERHLIDEAGA 180 Query: 179 EAKDSYRKAQIGMLLMGVLTLGLGFFFTFVITRSIVRPLKRAGNIAETISRGDLTQDFHD 238 + + A + ML++G++ + LG F + ++ I RPL A +AET++ GDLT Sbjct: 181 DIQRVKNAASLWMLVIGLVAVVLGAIFAWRLSLGITRPLANAVKLAETVAAGDLTSTLAI 240 Query: 239 HGRDEAATMVNALEAMQTNLAATLNEVKESAAVIAVASHEIARGNVDLSNRTESQASSLE 298 +DE ++NAL++M NLA ++EV+ IA AS +IA GN+DLS+RTE QASSLE Sbjct: 241 DSKDEIGQLLNALKSMNDNLARIVSEVRSGTETIATASSQIASGNLDLSSRTEEQASSLE 300 Query: 299 ETASSMEQLTSTVQQNAENARQANQLVVSASDYATKGGRVVGDVVATMGSIKESSSKIVD 358 ETAS+ME+LTSTV+QNA+NA+QANQL VSAS AT+GG VV V+ATM SI ESS +I D Sbjct: 301 ETASAMEELTSTVKQNADNAQQANQLAVSASGIATQGGEVVDQVIATMQSISESSKRIAD 360 Query: 359 IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQRSAAAAKEIKGLISD 418 IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA AAKEIKGLI+D Sbjct: 361 IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSANAAKEIKGLITD 420 Query: 419 SVEKVDAGGKLVDEAGATMSEIVTSVKHVADIMGEITAASQEQSAGIAEVNHAITQIDEI 478 SVE VDAG +LV++AG TM +V SV+ V DI+ EI+AAS EQS GI +VN AI Q+DE+ Sbjct: 421 SVESVDAGSRLVEQAGTTMKHVVDSVQRVTDIVSEISAASHEQSTGIEQVNQAIVQMDEV 480 Query: 479 TQQNAALVEQAAAAAESLQEQADVLARAVAVFRLKTAQAQGSIPTPPPVPAPPAPLRTVN 538 TQQNAALVE+AAAA++SLQ+QA LA+AV+VF++ Q Q ++ P P A V+ Sbjct: 481 TQQNAALVEEAAAASQSLQDQAASLAQAVSVFKVNGMQVQAAVHKVSK-PKPVA----VS 535 Query: 539 APAAVTATRPVASLPAAAPAKRKPAALARDDEFEEF 574 P V A++PV + PA DE+EEF Sbjct: 536 KPKVVVASKPVTTTRTRTAM--VPAVAGSADEWEEF 569 >ref|YP_314418.1| chemotaxis sensory transducer [Thiobacillus denitrificans ATCC 25259] gb|AAZ96613.1| chemotaxis sensory transducer [Thiobacillus denitrificans ATCC 25259] Length = 586 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 276/516 (53%), Positives = 348/516 (67%), Gaps = 17/516 (3%) Query: 5 LKIGSRLAFGFCLILLLATAILLIGLWRMAELEAASEYVIDEKVAAMTAALNMREAGSQL 64 +KIG+RL GF +LLL A+ +GL +++++ + V ++ + MR+A Sbjct: 40 MKIGTRLGTGFGAVLLLTLAVAGLGLAYLSQIQRHVDDVAGSRMGKIKLVNGMRDAMQSG 99 Query: 65 ALALRKVVTPTD----AAEGKAEDAHLSKILQAYAGFEKQITELSPAGRG-KELLTAASG 119 A+A+R +V TD A E + AH ++ A A + SPA + + AA Sbjct: 100 AVAVRNLVLLTDEGAMAEEAQRFLAHRARYADAAAKLATAVR--SPAETSVYDKIAAARA 157 Query: 120 QSKQLFPIVETIRQQVASNNYFDAAQLLKSDFLPAHDKWMASVGALAAFQQEDMKAAHAE 179 +++ P ++ +R+ A N +A ++L + P +W+A++ +AA Q+ A + Sbjct: 158 RTE---PALDKVRE-FAMGNPLEATRVLVEEVRPLQQQWLAALEEMAALQERGAAVAMVD 213 Query: 180 AKDSYRKAQIGMLLMGVLTLG---LGFFFTFVITRSIVRPLKRAGNIAETISRGDLTQDF 236 A D+Y A +LL VL+LG G + ITRS+ P+++A +A +++ GDLT Sbjct: 214 AADAYANA-FSILL--VLSLGAVVTGAGVAWRITRSVTEPVRKAVALARSVAGGDLTARG 270 Query: 237 HDHGRDEAATMVNALEAMQTNLAATLNEVKESAAVIAVASHEIARGNVDLSNRTESQASS 296 DE + AL M +LA + EV+ + IAVAS EIA GN DLS+RTESQASS Sbjct: 271 ESRADDEFGQLQRALTGMTASLAGIVAEVRHTTDTIAVASREIASGNADLSSRTESQASS 330 Query: 297 LEETASSMEQLTSTVQQNAENARQANQLVVSASDYATKGGRVVGDVVATMGSIKESSSKI 356 LEETASSME+LTSTV+QNAENARQANQLVVS +D A KGG VVG VV TM SIK+SS KI Sbjct: 331 LEETASSMEELTSTVRQNAENARQANQLVVSTADVAVKGGEVVGQVVDTMASIKDSSRKI 390 Query: 357 VDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQRSAAAAKEIKGLI 416 DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA AAKEIK LI Sbjct: 391 SDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAGAAKEIKSLI 450 Query: 417 SDSVEKVDAGGKLVDEAGATMSEIVTSVKHVADIMGEITAASQEQSAGIAEVNHAITQID 476 DSV KVDAG KLVDEAG TM EIV+SVK V DIM EI AASQEQSAGI +VN A+ Q+D Sbjct: 451 EDSVGKVDAGSKLVDEAGKTMDEIVSSVKRVTDIMSEIAAASQEQSAGIEQVNQAVGQMD 510 Query: 477 EITQQNAALVEQAAAAAESLQEQADVLARAVAVFRL 512 E+TQQNAALVE+AAAAAESLQEQA LA AV+VF+L Sbjct: 511 EMTQQNAALVEEAAAAAESLQEQAAKLADAVSVFKL 546 >ref|YP_001354515.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR88975.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] Length = 567 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 274/586 (46%), Positives = 360/586 (61%), Gaps = 34/586 (5%) Query: 2 IQRLKIGSRLAFGFCLILLLATAILLIGLWRMAELEAASEYVIDEKVAAMTAALNMREAG 61 I LKIG RL F +ILLL +++++G+WR+ ++ A+ ++ + AA L Sbjct: 3 ISNLKIGMRLGLAFAVILLLMASMIVVGVWRLQDVAQATVHMEE---AAHKERLTHEWYL 59 Query: 62 SQLALALRKVVTPTDAAEGKAEDAHLSKILQA--------YAGFEKQITELSPAGRGKEL 113 +A A+R AA ++ DA + K Q + + +I L + GK+L Sbjct: 60 GNVANAIRT------AARIRSNDAEIQKQFQKEMELQSQEISKLQNEIVALIHSEEGKKL 113 Query: 114 LTAASGQSKQLFPI---VETIRQQVASNNYFDAAQLLKSDFLPAHDKWMASVGALAAFQQ 170 ++ + I V ++ + + A +L+++ PA + SV A+ +FQQ Sbjct: 114 MSVVGEKRTAYMDIRKDVFKLKAEANAAADLAATKLVETKMDPAMAAYNESVQAVVSFQQ 173 Query: 171 EDMKAAHAEAKDSYRKAQIGMLLMGVLTLGLGFFFTFVITRSIVRPLKRAGNIAETISRG 230 + A A+ Y + ++ +G + L L F ++++RSI RPL A ++A T++ G Sbjct: 174 VIFQRAKADVDALYASGRTILITLGSIALILSAFLAWLLSRSITRPLDYAVSVARTVASG 233 Query: 231 DLTQDFHDHGRDEAATMVNALEAMQTNLAATLNEVKESAAVIAVASHEIARGNVDLSNRT 290 DL DE ++ AL M L ++++V+ IA AS++IA GN+DLS+RT Sbjct: 234 DLRNKIQSSSNDETGQLLRALRDMNDGLVQSVSQVRTGIETIATASNQIAAGNLDLSSRT 293 Query: 291 ESQASSLEETASSMEQLTSTVQQNAENARQANQLVVSASDYATKGGRVVGDVVATMGSIK 350 E QASSLEETASSME+LTSTV+QNA+NARQANQL VSAS A KGG VV VV TM I Sbjct: 294 EEQASSLEETASSMEELTSTVKQNADNARQANQLAVSASGVAEKGGEVVSRVVDTMEQIN 353 Query: 351 ESSSKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQRSAAAAK 410 S+ KIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSAAAAK Sbjct: 354 ASAKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAAAAK 413 Query: 411 EIKGLISDSVEKVDAGGKLVDEAGATMSEIVTSVKHVADIMGEITAASQEQSAGIAEVNH 470 EIK LI DSV+KV+ G KLV EAG TM E+V SVKHV DIM EI AASQEQSAGI +VN Sbjct: 414 EIKTLIGDSVDKVELGSKLVGEAGVTMDEVVQSVKHVTDIMSEIMAASQEQSAGIEQVNQ 473 Query: 471 AITQIDEITQQNAALVEQAAAAAESLQEQADVLARAVAVFRLKTAQAQGSIPTPPPVPAP 530 AI Q+D++TQQNAALVE+AAAAAESL EQA LA AV+VF+L + + A Sbjct: 474 AIGQMDQVTQQNAALVEEAAAAAESLNEQAAKLAEAVSVFKLDS------------ITAA 521 Query: 531 PAPLRTVNAPAAVTATRPVASLPAAAPAKRK--PAALARDDEFEEF 574 AP + VN V + A+ A P +K A D++EEF Sbjct: 522 AAPSKKVNVGTRVASHGAPANRAIAVPVTKKISNGAATGGDDWEEF 567 >ref|YP_984693.1| methyl-accepting chemotaxis sensory transducer [Acidovorax sp. JS42] gb|ABM40617.1| methyl-accepting chemotaxis sensory transducer [Acidovorax sp. JS42] Length = 580 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 250/528 (47%), Positives = 345/528 (65%), Gaps = 8/528 (1%) Query: 2 IQRLKIGSRLAFGFCLILLLATAILLIGLWRMAELEAASEYVIDEKVAAMTAALNMREAG 61 + LK+G+RLA F L+LL+ I +G+WR+ EL + + + + AA R+A Sbjct: 3 LSNLKVGTRLALSFGLVLLITVVIAAVGIWRLQELASVTHQLTSTDNERLRAASTWRQAI 62 Query: 62 SQLALALRKVVTPTDAAEGKAEDAHLSKILQAYAGFEKQITELSPAGRGKELLTAASGQS 121 + R + D + + + ++K + + ++ + L G+ LL A ++ Sbjct: 63 DLNWVRTRAAILDADTSHLSSWQSEIAKTSEEASKAQEVVERLVTTDEGRRLL-ADIAKT 121 Query: 122 KQLF--PIVETIRQQVASNNYFDAAQLLKSDFLPAHDKWMASVGALAAFQQEDMKAAHAE 179 ++ + P E ++++ A + +LL S P D ++ S+ A+ Q+ ++ Sbjct: 122 REAYRGPRAELLKRKAAGESV---GELLDSQLKPLADAYLQSIVAMEQRQRALYESTRDN 178 Query: 180 AKDSYRKAQIGMLLMGVLTLGLGFFFTFVITRSIVRPLKRAGNIAETISRGDLTQDFHDH 239 A +++ ++++ + L +G +++RS+ PL+ A A I+ GDLTQ H Sbjct: 179 AAKQATRSRAILMVVTAVALLVGAGAAILLSRSVTGPLQLAVRGAGLIAEGDLTQSIQAH 238 Query: 240 GRDEAATMVNALEAMQTNLAATLNEVKESAAVIAVASHEIARGNVDLSNRTESQASSLEE 299 GRDEAA ++ AL MQ NLA + V+ +A +A AS EI++GN DLS RTESQAS+LEE Sbjct: 239 GRDEAAALLKALGHMQGNLARVVAGVRANAESVASASAEISQGNHDLSGRTESQASALEE 298 Query: 300 TASSMEQLTSTVQQNAENARQANQLVVSASDYATKGGRVVGDVVATMGSIKESSSKIVDI 359 TA+SMEQL +TV+QNA+NARQANQL ++AS A +GG VV +VV TM I ESS KI DI Sbjct: 299 TAASMEQLGATVRQNADNARQANQLAMNASTVAVQGGEVVSEVVDTMRGINESSRKIADI 358 Query: 360 IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQRSAAAAKEIKGLISDS 419 IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRALAQRSA AAKEIK LI+ S Sbjct: 359 IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRALAQRSAEAAKEIKQLITAS 418 Query: 420 VEKVDAGGKLVDEAGATMSEIVTSVKHVADIMGEITAASQEQSAGIAEVNHAITQIDEIT 479 VE+V+ G +LVD+AGATM+E+VT+++ V DIMGEI+AAS EQSAG+A+V AITQ+D+ T Sbjct: 419 VERVEQGSQLVDKAGATMTEVVTAIRRVTDIMGEISAASSEQSAGVAQVGEAITQMDQAT 478 Query: 480 QQNAALVEQAAAAAESLQEQADVLARAVAVFRLKTAQAQGSIPTPPPV 527 QQNAALVE+ AAAA SL QA L AVAVF+L AQ ++P PV Sbjct: 479 QQNAALVEEMAAAASSLSGQARELVEAVAVFKL--AQKASALPRMAPV 524 >ref|YP_315380.1| methyl-accepting chemotaxis sensory transducer [Thiobacillus denitrificans ATCC 25259] gb|AAZ97575.1| chemotaxis sensory transducer [Thiobacillus denitrificans ATCC 25259] Length = 572 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 291/590 (49%), Positives = 366/590 (62%), Gaps = 36/590 (6%) Query: 1 MIQRLKIGSRLAFGFCLILLLATAILLIGLWRMAELEAASEYVIDEKVAAM--TAALNMR 58 M+ L I SRL F + +L TAI +GL ++ + + V +++V + +N Sbjct: 3 MLANLSIKSRLVFVIGFLSILLTAIGGLGLVSLSATNGSLKTVYEDRVVGLGHLERINAL 62 Query: 59 EAGSQL----ALALRKVVTPTDAAEGKAEDAHLSKILQAYAGFEKQITELSPAGRGKELL 114 GSQ+ A+A + P D+A + + G K + K L Sbjct: 63 MNGSQIIVGEAVAGQLSAFPDDSAVVDQRVNDIKNTITEIDGIWKTFLASHLSSEEKALA 122 Query: 115 TAASGQSKQ-----LFPIVETIRQQVASNNYFDAAQLLKSDFLPAHDKWMASVGALAAFQ 169 A S ++ + P++ + +++++ A ++L+ + A+ AL A Q Sbjct: 123 DAFSASRQKYGREGVVPVLAAL----SAHDFQQAGEILQGPMRETYPAVRANAEALIASQ 178 Query: 170 QEDMKAAHAEAKDSY---RKAQIGMLLMGVLTLGLGFFFTFVITRSIVRPLKRAGNIAET 226 + ++ A A+ + R + ++ GVL GL + + R+I RPL +A IAE+ Sbjct: 179 LKLAQSEFAAAQSRFVMVRNISVFAIVAGVLLAGLTGVW---LVRAITRPLNQAVRIAES 235 Query: 227 ISRGDLTQDFHDHGRDEAATMVNALEAMQTNLAATLNEVKESAAVIAVASHEIARGNVDL 286 ++ GDLTQ +DE ++ AL+ M +LA + +V+ IAVAS EIA GN DL Sbjct: 236 VAAGDLTQKIEVQSQDETGQLMQALKDMNVSLADIVGQVRHGTDTIAVASREIASGNADL 295 Query: 287 SNRTESQASSLEETASSMEQLTSTVQQNAENARQANQLVVSASDYATKGGRVVGDVVATM 346 S+RTESQASSLEETASSME+LTSTV+QNAENARQANQLVVS +D A KGG VVG VV TM Sbjct: 296 SSRTESQASSLEETASSMEELTSTVRQNAENARQANQLVVSTADVAVKGGEVVGQVVDTM 355 Query: 347 GSIKESSSKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQRSA 406 SIK+SS KI DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA Sbjct: 356 ASIKDSSRKISDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSA 415 Query: 407 AAAKEIKGLISDSVEKVDAGGKLVDEAGATMSEIVTSVKHVADIMGEITAASQEQSAGIA 466 AAKEIK LI DSV KVDAG KLVDEAG TM EIV+SVK V DIM EI AASQEQSAGI Sbjct: 416 GAAKEIKSLIEDSVGKVDAGSKLVDEAGKTMDEIVSSVKRVTDIMSEIAAASQEQSAGIE 475 Query: 467 EVNHAITQIDEITQQNAALVEQAAAAAESLQEQADVLARAVAVFRLKTAQAQGSIPTPPP 526 +VN A+ Q+DE+TQQNAALVE+AAAAAESLQEQA LA AV+VFRL A AQ P Sbjct: 476 QVNQAVGQMDEMTQQNAALVEEAAAAAESLQEQAAKLADAVSVFRLDGAYAQ---RREVP 532 Query: 527 VPAPP-APLRTVNAPAAVTATRPVASLPAAAPAKRKPAALARD-DEFEEF 574 V AP APL T PA+V A RP K+ AA D ++EEF Sbjct: 533 VSAPRVAPLPTRPRPASVPAARP----------KKLAAAQGNDGGDWEEF 572 >ref|ZP_08404611.1| methyl-accepting chemotaxis sensory transducer [Hylemonella gracilis ATCC 19624] gb|EGI78289.1| methyl-accepting chemotaxis sensory transducer [Hylemonella gracilis ATCC 19624] Length = 625 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 250/522 (47%), Positives = 341/522 (65%), Gaps = 17/522 (3%) Query: 2 IQRLKIGSRLAFGFCLILLLATAILLIGLWRMAELEAASEYVIDEKVAAMTAALNMREAG 61 ++ ++IG+RL GF +IL+L + L+G+ RMA++ + + DE + NM E Sbjct: 4 LKNMRIGARLGLGFGVILVLLAVVSLLGISRMAQVYKELQAITDENNEKVKLTENMSETI 63 Query: 62 SQLALALRKVVTPTDAAEGKAEDAHLSKILQAYAGFEKQITELSPAGRGKELLTAASGQS 121 + + R VV T+ A +A AH S +L+ +G+ K +L+ + E L + S Sbjct: 64 THIGALARDVVLQTEEAGIRA--AHKS-LLETRSGYSKLEADLA---KMLESLASTSQAE 117 Query: 122 KQLFPIVETIRQQV-----------ASNNYFDAAQLLKSDFLPAHDKWMASVGALAAFQQ 170 K +TIR + +N +A Q+L D +PA +W A++ LA F+ Sbjct: 118 KDTLAKTKTIRARADAITDKVVELGLANRNAEATQMLTRDMVPAQREWQAAMDELADFEY 177 Query: 171 EDMKAAHAEAKDSYRKAQIGMLLMGVLTLGLGFFFTFVITRSIVRPLKRAGNIAETISRG 230 + A AK Y A ++ + V+ + +G F +VITRSI P+ RA +AET++ G Sbjct: 178 KASDDAEVRAKGVYETAMASIITLTVIAIAIGVFVAYVITRSITAPVGRAVTLAETVAAG 237 Query: 231 DLTQDFHDHGRDEAATMVNALEAMQTNLAATLNEVKESAAVIAVASHEIARGNVDLSNRT 290 DL+ G+DE A ++ +L MQ +L+ ++ V+ + +A AS EIA+GN DLS RT Sbjct: 238 DLSSRVMVEGQDETAQLLRSLAHMQESLSRVVSTVRVGSESVATASAEIAQGNQDLSART 297 Query: 291 ESQASSLEETASSMEQLTSTVQQNAENARQANQLVVSASDYATKGGRVVGDVVATMGSIK 350 E+QASSLEETA+SMEQL+STV QNA+NARQANQL SAS A +GG VV V+ TM I Sbjct: 298 ETQASSLEETAASMEQLSSTVTQNADNARQANQLAQSASSVAVEGGEVVSQVIETMRGIS 357 Query: 351 ESSSKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQRSAAAAK 410 +SS KI DII VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA EVR LAQRSA AAK Sbjct: 358 DSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAEAAK 417 Query: 411 EIKGLISDSVEKVDAGGKLVDEAGATMSEIVTSVKHVADIMGEITAASQEQSAGIAEVNH 470 EIK LI+DSV +V+AG LVD+AG MSEIV +K V D++G+I+AAS EQS G+A+V Sbjct: 418 EIKTLITDSVHRVEAGTTLVDQAGNKMSEIVQGIKRVTDLVGDISAASTEQSQGVAQVGE 477 Query: 471 AITQIDEITQQNAALVEQAAAAAESLQEQADVLARAVAVFRL 512 A+ Q+D++TQQNAALVE+ +AAA SL+ QA+ L +AVA+F+L Sbjct: 478 AVQQMDQVTQQNAALVEEMSAAANSLKSQANELVQAVAIFKL 519 >ref|YP_001101318.1| methyl-accepting chemotaxis protein [Herminiimonas arsenicoxydans] emb|CAL63197.1| Methyl-accepting chemotaxis protein [Herminiimonas arsenicoxydans] Length = 561 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 275/582 (47%), Positives = 365/582 (62%), Gaps = 34/582 (5%) Query: 3 QRLKIGSRLAFGFCLILLLATAILLIGLWRMAELEAAS----EYVIDEKVAAMTAALNMR 58 + LKIG RL F L+L+L + ++G+ R+ ++ A+ E I E++A ++ Sbjct: 4 KNLKIGVRLGMAFGLLLVLMAFMTVMGVLRLQDVAKATVLMEEATIKERLAQQW----IK 59 Query: 59 EAGSQLALALRKVVTPTDAAEGKAEDAHLSKILQAYAGFEKQITELSPAGRGKELLTAAS 118 + +V T +D + K +S I A + + ++ L + GK+LL A Sbjct: 60 GIETNTVRTFARVRT-SDPEQDKILQQEMSAISAAVSKQQDELETLVVSAEGKKLL-ATV 117 Query: 119 GQSKQLFPIVETIRQQVASNNYFDAAQL---LKSDFLPAHDKWMASVGALAAFQQEDMKA 175 + + + IR V + A+L + + PA D ++ SV A+ Q + + Sbjct: 118 AEKRATYT---AIRDDVMNLREARGAELQNAIANKMKPAADAYIQSVEAVVNAQINNFED 174 Query: 176 AHAEAKDSYRKAQIGMLLMGVLTLGLGFFFTFVITRSIVRPLKRAGNIAETISRGDLTQD 235 A Y+ A++ ++++G++ L LG +++TRSI +PL A ++A ++ GDLT Sbjct: 175 AKGRVDTIYQSARMLLIVLGLVALTLGIVLAWMLTRSITKPLDYAVSVARLVASGDLTGR 234 Query: 236 FHDHGRDEAATMVNALEAMQTNLAATLNEVKESAAVIAVASHEIARGNVDLSNRTESQAS 295 +DE ++ AL+ M +L A++ +V+ IA AS++IA GN+DLS+RTE QAS Sbjct: 235 ITVDSKDETGQLLQALKDMNDSLTASITQVRSGVDTIATASNQIASGNLDLSSRTEEQAS 294 Query: 296 SLEETASSMEQLTSTVQQNAENARQANQLVVSASDYATKGGRVVGDVVATMGSIKESSSK 355 SLEETASSME+LTSTV+QNA+NARQANQL V+AS A KGG VV VV TM I S+ K Sbjct: 295 SLEETASSMEELTSTVKQNADNARQANQLAVTASGVAEKGGTVVSKVVDTMDGINTSARK 354 Query: 356 IVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQRSAAAAKEIKGL 415 IVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSAAAAKEIK L Sbjct: 355 IVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKTL 414 Query: 416 ISDSVEKVDAGGKLVDEAGATMSEIVTSVKHVADIMGEITAASQEQSAGIAEVNHAITQI 475 I DSV+KVD G KLV EAG TM E+V SVK V DIM EI AASQEQSAGI +VN AI Q+ Sbjct: 415 IDDSVDKVDTGSKLVAEAGTTMVEVVDSVKRVTDIMAEIMAASQEQSAGIEQVNQAIGQM 474 Query: 476 DEITQQNAALVEQAAAAAESLQEQADVLARAVAVFRLKTAQAQGSIPTPPPVPAPPAPLR 535 D++TQQNAALVE+AAAAAESL EQA LA+AV++F+L + T PV A AP Sbjct: 475 DQVTQQNAALVEEAAAAAESLNEQAANLAQAVSIFKLDGVANSSRVATRLPVAASNAP-- 532 Query: 536 TVNAPAAVTATRPVASLPAAAPAKRKPAALAR---DDEFEEF 574 ATR AA+PA +K A R D++EEF Sbjct: 533 ---------ATRQF----AASPAPKKIANETRPVSGDDWEEF 561