BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0270.p (596 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774676.1| methyl-accepting chemotaxis transducer trans... 1181 0.0 ref|ZP_02886327.1| methyl-accepting chemotaxis sensory transduce... 478 e-132 ref|ZP_06845852.1| methyl-accepting chemotaxis sensory transduce... 478 e-132 ref|YP_442991.1| methyl-accepting chemotaxis protein [Burkholder... 478 e-132 ref|YP_001895882.1| methyl-accepting chemotaxis sensory transduc... 475 e-132 ref|YP_003605251.1| methyl-accepting chemotaxis sensory transduc... 474 e-131 ref|YP_559016.1| methyl-accepting chemotaxis sensory transducer ... 470 e-130 ref|YP_003907110.1| methyl-accepting chemotaxis sensory transduc... 460 e-127 ref|ZP_02367805.1| methyl-accepting chemotaxis protein [Burkhold... 460 e-127 ref|YP_002896601.1| methyl-accepting chemotaxis protein I [Burkh... 451 e-124 >ref|YP_003774676.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62768.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 596 Score = 1181 bits (3056), Expect = 0.0, Method: Compositional matrix adjust. Identities = 593/596 (99%), Positives = 594/596 (99%) Query: 1 MSIKNLSIKAQLAIAILVLAALLVAIGASGLLGMSAAVSINAQLSQERLPKTVAADNTLI 60 MSIKNLSIKAQLAIAILVLAALLVAIGASGLLGMSAAVSINAQLSQERLPKTVAADNTLI Sbjct: 1 MSIKNLSIKAQLAIAILVLAALLVAIGASGLLGMSAAVSINAQLSQERLPKTVAADNTLI 60 Query: 61 WIGRQRTSLDQAALTNDPAWAERMYGMDANARKEALQWWGKYTALPQTEEGRVLVKKVSD 120 WIGRQRTSLDQAALTNDPAWAERMYGMDANARKEALQWWGKYTALPQTEEGRVLVKKVSD Sbjct: 61 WIGRQRTSLDQAALTNDPAWAERMYGMDANARKEALQWWGKYTALPQTEEGRVLVKKVSD 120 Query: 121 GIDKTEQELTRFAEVIKAGDRQAIADQARKVGTIYTAMQLDGQALSKYETEQAAQSAGAS 180 GIDKTEQELTRFAEVIKAGDRQAIADQARKVGTIYTAMQLDGQALSKYETEQAAQSAGAS Sbjct: 121 GIDKTEQELTRFAEVIKAGDRQAIADQARKVGTIYTAMQLDGQALSKYETEQAAQSAGAS 180 Query: 181 MGRYEASRNFSIVAIVAGLLLAFYSWWSLRRAIGEPMQRALRHFDAIASGDLTEAVHVHS 240 M RYEASRNFSIVAIVAGLLLAFYSWWSLRRAIGEPMQRALRHFDAIASGDLTEAVHVHS Sbjct: 181 MARYEASRNFSIVAIVAGLLLAFYSWWSLRRAIGEPMQRALRHFDAIASGDLTEAVHVHS 240 Query: 241 RNEMGQLLEGLKRMQESLSRTVQAVRSGSEAISTATREIASGNLDLSSRTEQQAASLEET 300 RNEMGQLLEGLKRMQESLSRTVQAVRSGS+AISTATREIASGNLDLSSRTEQQAASLEET Sbjct: 241 RNEMGQLLEGLKRMQESLSRTVQAVRSGSDAISTATREIASGNLDLSSRTEQQAASLEET 300 Query: 301 ASSMEELTSTVKHNADNARQATTLAVNASTIAADGNAVVGRVVQTMEEIRASSAKITDIV 360 ASSMEELTSTVKHNADNARQATTLAVNASTIAADGNAVVGRVVQTMEEIRASSAKITDIV Sbjct: 301 ASSMEELTSTVKHNADNARQATTLAVNASTIAADGNAVVGRVVQTMEEIRASSAKITDIV 360 Query: 361 SIIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSSSAAKEIKELIMHSV 420 SIIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSSSAAKEIKELIMHSV Sbjct: 361 SIIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSSSAAKEIKELIMHSV 420 Query: 421 DRVQAGSELVGQAGDTMSDVINAVQRVTDIMSEISAASNEQSAGIDQVSHAVTQMDEATQ 480 DRVQAGSELVGQAGDTMSDVINAVQRVTDIMSEISAASNEQSAGIDQVSHAVTQMDEATQ Sbjct: 421 DRVQAGSELVGQAGDTMSDVINAVQRVTDIMSEISAASNEQSAGIDQVSHAVTQMDEATQ 480 Query: 481 QNAALVEQASAAAKSLEQQAQALMQEVAIFRVNGAGPTVKPPAAAASRATVKPAAKPAMK 540 QNAALVEQASAAAKSLEQQAQALMQEVAIFRVNGAGPTVKPPAAAASRATVKPAAKPAMK Sbjct: 481 QNAALVEQASAAAKSLEQQAQALMQEVAIFRVNGAGPTVKPPAAAASRATVKPAAKPAMK 540 Query: 541 PASAAPAAPATPTAPAAPVAKVAPAVKRPALPAAPAAPKPAGRGVPAGDEGDWETF 596 PASAAPAAPATPTAPAAPVAKVAPAVKRPALPAAPAA KPAGRGVPAGDEGDWETF Sbjct: 541 PASAAPAAPATPTAPAAPVAKVAPAVKRPALPAAPAAAKPAGRGVPAGDEGDWETF 596 >ref|ZP_02886327.1| methyl-accepting chemotaxis sensory transducer [Burkholderia graminis C4D1M] gb|EDT07981.1| methyl-accepting chemotaxis sensory transducer [Burkholderia graminis C4D1M] Length = 610 Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust. Identities = 299/549 (54%), Positives = 373/549 (67%), Gaps = 16/549 (2%) Query: 4 KNLSIKAQLAIAILVLAALLVAIGASGLLGMSAAVSINAQLSQERLPKTVAADNTLIWIG 63 K +SIKA++ + + LAALL+ IGA GL GMS + + +P V N ++ Sbjct: 4 KGISIKARIGLTMAFLAALLLGIGAFGLFGMSRSNHAYQETFTNSMPSAVNIGNAELYAA 63 Query: 64 RQRTSLDQAA-LTNDPAWA---ERMYGMDANARKEALQWWGKYTALPQTEEGRVLVKKVS 119 R+R +LD+AA + P A ER M R + WW KY LP+ + L + V Sbjct: 64 RERLALDRAAFMIGTPEGAPTLERARSM----RTTSDMWWKKYMDLPRDADEDRLARDVV 119 Query: 120 DGIDKTEQELTRFAEVIKAGDRQAIADQARKVGTIYTAMQLDGQALSKYETEQAAQSAGA 179 D Q FA V+ A D+ + D A+ + + Y + AL KY+ E A Sbjct: 120 SKRDALHQRADAFAAVVAASDQSKLIDGAKLLQSAYNELATSDDALRKYQFELAQAGYDD 179 Query: 180 SMGRYEASRNFSIVAIVAGLLLAFYSWWSLRRAIGEPMQRALRHFDAIASGDLTEAVHVH 239 + + R SI A++AG+L A S+ +L RAI P+ AL HFDAIA+GDL V V Sbjct: 180 AQSNFHMFRMVSIGALIAGILAALLSYVALSRAIARPLAEALDHFDAIAAGDLRRQVVVS 239 Query: 240 SRNEMGQLLEGLKRMQESLSRTVQAVRSGSEAISTATREIASGNLDLSSRTEQQAASLEE 299 SR+EMGQ+LEG+ +MQ SL TV+AVR GSE+I+TATREIA+GN+DLSSRTE+QA++L+E Sbjct: 240 SRDEMGQILEGISKMQRSLIETVRAVRGGSESIATATREIAAGNIDLSSRTEEQASALQE 299 Query: 300 TASSMEELTSTVKHNADNARQATTLAVNASTIAADGNAVVGRVVQTMEEIRASSAKITDI 359 TASSMEELT TVK NADNARQA+ LA NAS IA G+AVVG+VV TM EI SSAKI DI Sbjct: 300 TASSMEELTGTVKQNADNARQASALAANASEIANKGSAVVGQVVGTMGEINQSSAKIADI 359 Query: 360 VSIIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSSSAAKEIKELIMHS 419 +SII+GIAFQTNILALNAAVEAARAGE+GRGFAVVA EVR+LAQRSS+AAKEIKELI S Sbjct: 360 ISIIEGIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRSLAQRSSAAAKEIKELIDTS 419 Query: 420 VDRVQAGSELVGQAGDTMSDVINAVQRVTDIMSEISAASNEQSAGIDQVSHAVTQMDEAT 479 VDRVQ+GS LV QAG TM+++I AVQRVTDIM EI+AAS EQS+GIDQV+ AVTQMDE T Sbjct: 420 VDRVQSGSALVDQAGRTMNEIIGAVQRVTDIMGEIAAASEEQSSGIDQVARAVTQMDEVT 479 Query: 480 QQNAALVEQASAAAKSLEQQAQALMQEVAIFRVNGAGPTVKPPAAAASRATVKPAAKPAM 539 QQNAALVE+A+AAA SLE QA L VA+F+++ G K + ++ T PA Sbjct: 480 QQNAALVEEAAAAASSLEDQADKLRGAVAVFQLSDEG---KVSGGSLAKHTPTPA----- 531 Query: 540 KPASAAPAA 548 + SAAP A Sbjct: 532 RAVSAAPRA 540 >ref|ZP_06845852.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. Ch1-1] gb|EFG66512.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. Ch1-1] Length = 599 Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust. Identities = 297/554 (53%), Positives = 375/554 (67%), Gaps = 11/554 (1%) Query: 1 MSIKNLSIKAQLAIAILVLAALLVAIGASGLLGMSAAVSINAQLSQERLPKTVAADNTLI 60 M K ++IKA++ + + LAALLVAIG GL GMS + + +P V N + Sbjct: 1 MLNKGITIKARIGLTMAFLAALLVAIGVFGLFGMSRSNHALSDTFTNAMPSAVNIGNAEL 60 Query: 61 WIGRQRTSLDQAA-LTNDPAWA---ERMYGMDANARKEALQWWGKYTALPQTEEGRVLVK 116 + R+R +LD+AA + P A ER GM R + WW +Y LP+ E L + Sbjct: 61 YAARERLALDRAAFMIGTPEAAPTLERARGM----RATSDMWWKQYMDLPRGPEEDRLAQ 116 Query: 117 KVSDGIDKTEQELTRFAEVIKAGDRQAIADQARKVGTIYTAMQLDGQALSKYETEQAAQS 176 V D Q L FA I A D+ + D A+++ Y + AL KY+ A Sbjct: 117 DVVSRRDALHQRLDAFAATIAANDQSKVVDGAKRLQVAYNDLANADDALRKYQFTSAKDG 176 Query: 177 AGASMGRYEASRNFSIVAIVAGLLLAFYSWWSLRRAIGEPMQRALRHFDAIASGDLTEAV 236 ++ +E R S A++ G+L A S+ +L RAI P+ AL HFDAI++GDL V Sbjct: 177 YDSAESSFELFRLISSGALLIGVLAAAISYLTLSRAIARPLDAALGHFDAISAGDLRRPV 236 Query: 237 HVHSRNEMGQLLEGLKRMQESLSRTVQAVRSGSEAISTATREIASGNLDLSSRTEQQAAS 296 V SR+EMG+LLEG+ RMQ SL+ TV+ VRSGSE+I+ AT +IA+GN+DLSSRTE+QA++ Sbjct: 237 VVTSRDEMGRLLEGIARMQRSLTETVRTVRSGSESIAAATHQIAAGNIDLSSRTEEQASA 296 Query: 297 LEETASSMEELTSTVKHNADNARQATTLAVNASTIAADGNAVVGRVVQTMEEIRASSAKI 356 L++TASSMEELT TVK NADNARQA++LA NAS IA G+AVV +VV TM +I SSA+I Sbjct: 297 LQQTASSMEELTGTVKQNADNARQASSLAANASEIANKGSAVVDKVVGTMGDINQSSARI 356 Query: 357 TDIVSIIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSSSAAKEIKELI 416 DI+SII+GIAFQTNILALNAAVEAARAGE GRGFAVVA EVR+LAQRSS+AAKEIKELI Sbjct: 357 ADIISIIEGIAFQTNILALNAAVEAARAGEDGRGFAVVAGEVRSLAQRSSAAAKEIKELI 416 Query: 417 MHSVDRVQAGSELVGQAGDTMSDVINAVQRVTDIMSEISAASNEQSAGIDQVSHAVTQMD 476 SV+RVQ+GS LV +AG TM+D+I AVQRVTDIM EI+AAS EQS+GIDQV+ AVTQMD Sbjct: 417 DTSVERVQSGSALVDEAGRTMTDIIGAVQRVTDIMGEIAAASEEQSSGIDQVARAVTQMD 476 Query: 477 EATQQNAALVEQASAAAKSLEQQAQALMQEVAIFRVNGAGPTVKPPAA-AASRATVKPAA 535 E TQQNAALVE+A+AAA SLE QA L Q VA+F++ AG K PA+ A RA+ P Sbjct: 477 EVTQQNAALVEEAAAAASSLEDQAGKLRQAVAVFQLEEAG--YKAPASPAPKRASAPPRG 534 Query: 536 KPAMKPASAAPAAP 549 A K + AA P Sbjct: 535 VVARKGSHAAAVRP 548 >ref|YP_442991.1| methyl-accepting chemotaxis protein [Burkholderia thailandensis E264] ref|ZP_05587479.1| methyl-accepting chemotaxis protein [Burkholderia thailandensis E264] gb|ABC37193.1| methyl-accepting chemotaxis protein [Burkholderia thailandensis E264] Length = 616 Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust. Identities = 291/517 (56%), Positives = 372/517 (71%), Gaps = 8/517 (1%) Query: 1 MSIKNLSIKAQLAIAILVLAALLVAIGASGLLGMSAAVSINAQLSQERLPKTVAADNTLI 60 M +KNLSI+ +LA+ + +L+ LL +GA GL GMS A N Q S +LP T+ + + Sbjct: 1 MLLKNLSIRTRLAVTMTLLSVLLCVVGALGLFGMSRANDANEQTSSNQLPSTIDVASAEL 60 Query: 61 WIGRQRTSLDQAAL---TNDPA-WAERMYGMDANARKEALQWWGKYTALPQTEEGRVLVK 116 + R+R LD+AAL T D A ER M R + WW KY LP+ + L + Sbjct: 61 FAARERLVLDRAALLAGTPDAAPTIERARHM----RGVSDSWWKKYLDLPRNGQEDRLAQ 116 Query: 117 KVSDGIDKTEQELTRFAEVIKAGDRQAIADQARKVGTIYTAMQLDGQALSKYETEQAAQS 176 V+ ++EL F E+I A DR I + A+++ ++ L +AL ++ +QA+ + Sbjct: 117 DVAAKRQVLQRELDGFVELINANDRDRIIESAKRMQNVFNDFALASEALRAFQLKQASVN 176 Query: 177 AGASMGRYEASRNFSIVAIVAGLLLAFYSWWSLRRAIGEPMQRALRHFDAIASGDLTEAV 236 + Y ASR SI A+V GL ++ Y + SLR AI P+ AL HFDAIA+G+L + Sbjct: 177 FSDAQSVYGASRIASIAALVLGLAISLYCFLSLRAAIARPLADALGHFDAIAAGELRRPI 236 Query: 237 HVHSRNEMGQLLEGLKRMQESLSRTVQAVRSGSEAISTATREIASGNLDLSSRTEQQAAS 296 V R+EMG LLEGL +MQ SL+ TV++VR GSE+I+TA R+IA+GN+DLSSRTEQQAA+ Sbjct: 237 VVARRDEMGLLLEGLAKMQASLADTVRSVRVGSESIATAARQIAAGNIDLSSRTEQQAAA 296 Query: 297 LEETASSMEELTSTVKHNADNARQATTLAVNASTIAADGNAVVGRVVQTMEEIRASSAKI 356 LEETASSMEELT TV+ NADNARQA+ LA +AS IA GNAVVG+VV TM +I SSAKI Sbjct: 297 LEETASSMEELTGTVQRNADNARQASALAASASEIANKGNAVVGQVVGTMGDINQSSAKI 356 Query: 357 TDIVSIIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSSSAAKEIKELI 416 DI++II+GIAFQTNILALNAAVEAARAGE+GRGFAVVA EVR+LAQRSS+AAKEIKELI Sbjct: 357 ADIITIIEGIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRSLAQRSSTAAKEIKELI 416 Query: 417 MHSVDRVQAGSELVGQAGDTMSDVINAVQRVTDIMSEISAASNEQSAGIDQVSHAVTQMD 476 SV+RV+ GS LV AG TMS+VI AVQRVTDIM EI+AAS+EQS GIDQVS AV+QMD Sbjct: 417 DTSVERVRTGSSLVDDAGRTMSEVIGAVQRVTDIMGEIAAASDEQSTGIDQVSRAVSQMD 476 Query: 477 EATQQNAALVEQASAAAKSLEQQAQALMQEVAIFRVN 513 E TQQNAALVE+A+AAA+SL++QA L + V++FRV+ Sbjct: 477 EVTQQNAALVEEAAAAAQSLDEQAARLRETVSVFRVD 513 >ref|YP_001895882.1| methyl-accepting chemotaxis sensory transducer [Burkholderia phytofirmans PsJN] gb|ACD16658.1| methyl-accepting chemotaxis sensory transducer [Burkholderia phytofirmans PsJN] Length = 588 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 303/600 (50%), Positives = 388/600 (64%), Gaps = 22/600 (3%) Query: 4 KNLSIKAQLAIAILVLAALLVAIGASGLLGMSAAVSINAQLSQERLPKTVAADNTLIWIG 63 K ++IKA++ + + LAALLVAIG GL GMS + +P V N ++ Sbjct: 4 KGITIKARIGLTMAFLAALLVAIGVFGLFGMSRSNDAYKDTFTNAMPSAVDIGNAELFAA 63 Query: 64 RQRTSLDQAA-LTNDP---AWAERMYGMDANARKEALQWWGKYTALPQTEEGRVLVKKVS 119 R+R +LD+AA + P A ER GM R + WW KY + + + L + V Sbjct: 64 RERLALDRAAFMIGTPEVAATLERARGM----RATSDMWWKKYMDMSREPDEDRLAQDVV 119 Query: 120 DGIDKTEQELTRFAEVIKAGDRQAIADQARKVGTIYTAMQLDGQALSKYETEQAAQSAGA 179 + Q++ FA ++ A D + D A+++ Y + L KY+ A + + Sbjct: 120 SKREALHQQMDAFATIVAASDSPKLVDGAKRLQVAYNDLANSDDVLRKYQFTSAREGYDS 179 Query: 180 SMGRYEASRNFSIVAIVAGLLLAFYSWWSLRRAIGEPMQRALRHFDAIASGDLTEAVHVH 239 + + R S+ A++ G+L A S+ +L RAI P+ AL HFDAIA+GDL V V Sbjct: 180 AQSSFGVFRMVSMSALLIGVLAAVISYLTLSRAIARPLDAALGHFDAIAAGDLRRPVVVT 239 Query: 240 SRNEMGQLLEGLKRMQESLSRTVQAVRSGSEAISTATREIASGNLDLSSRTEQQAASLEE 299 SR+EMGQLL+G+ +MQ SL+ TV+ VRSGSE+I+TATR+IA+GN+DLSSRTE+QA++L+E Sbjct: 240 SRDEMGQLLDGIAKMQRSLTETVRTVRSGSESIATATRQIAAGNIDLSSRTEEQASALQE 299 Query: 300 TASSMEELTSTVKHNADNARQATTLAVNASTIAADGNAVVGRVVQTMEEIRASSAKITDI 359 TASSMEELT TVK NADNARQA++LA NAS IA G+AVVG+VV TM +I SSAKI DI Sbjct: 300 TASSMEELTGTVKQNADNARQASSLAANASEIANKGSAVVGQVVGTMGDINQSSAKIADI 359 Query: 360 VSIIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSSSAAKEIKELIMHS 419 +SII+GIAFQTNILALNAAVEAARAGE+GRGFAVVA EVR+LAQRSS+AAKEIKELI S Sbjct: 360 ISIIEGIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRSLAQRSSAAAKEIKELIDTS 419 Query: 420 VDRVQAGSELVGQAGDTMSDVINAVQRVTDIMSEISAASNEQSAGIDQVSHAVTQMDEAT 479 V+RVQ+GS LV +AG TM+++I AVQRVTDIM EI+AAS EQS+GIDQV+ AVTQMDE T Sbjct: 420 VERVQSGSALVDEAGRTMTEIIGAVQRVTDIMGEIAAASEEQSSGIDQVARAVTQMDEVT 479 Query: 480 QQNAALVEQASAAAKSLEQQAQALMQEVAIFRVNGAG---PTVKPPAAAASRATVKPAAK 536 QQNAALVE+A+AAA SLE QA L VA+F + +G P PP A++ P Sbjct: 480 QQNAALVEEAAAAASSLEDQAGKLRTAVAVFHLEESGYKAPVSTPPKRAST-----PLRS 534 Query: 537 PAMKPASAAPAAPATPTAPAAPVAKVAPAVKRPALPAAPAAPKPAGRGVPAGDEGDWETF 596 + S AA P A A A A A A AG GD+ DWETF Sbjct: 535 VVARKVSHTRAAQPAPHAAVATNAPAAAQPAAATTRAPAKATASAG-----GDQ-DWETF 588 >ref|YP_003605251.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. CCGE1002] gb|ADG15740.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. CCGE1002] Length = 588 Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust. Identities = 305/603 (50%), Positives = 393/603 (65%), Gaps = 22/603 (3%) Query: 1 MSIKNLSIKAQLAIAILVLAALLVAIGASGLLGMSAAVSINAQLSQERLPKTVAADNTLI 60 M K ++IKA++ + + LAALLVAIG GL GM + +P V N I Sbjct: 1 MLNKGITIKARIGLTMAFLAALLVAIGVFGLFGMGRSNDAYEDTFTNAMPGAVNIGNAEI 60 Query: 61 WIGRQRTSLDQAA-LTNDPAWAE-----RMYGMDANARKEALQWWGKYTALPQTEEGRVL 114 + R+R +LD+AA L P A RM G ++ WW KY LP+ + L Sbjct: 61 YAARERLALDRAAFLVGTPEAASTIERARMLGSTSD------MWWKKYLDLPRGADEDRL 114 Query: 115 VKKVSDGIDKTEQELTRFAEVIKAGDRQAIADQARKVGTIYTAMQLDGQALSKYETEQAA 174 + V+ + Q+L FA I+A D+ + + A+ + ++ + AL KY+ + A Sbjct: 115 AQDVAAKRNALHQQLESFATAIEANDQSKLVEHAKSLQAVFNDLVGADDALRKYQFDSAK 174 Query: 175 QSAGASMGRYEASRNFSIVAIVAGLLLAFYSWWSLRRAIGEPMQRALRHFDAIASGDLTE 234 Q ++ + R SI A+V G+L A S+ +L RAI P+ AL HF+AI++GDL Sbjct: 175 QGFDSAQSSFHIFRMVSIGALVVGVLAAALSYLTLSRAIARPLDEALGHFEAISAGDLRR 234 Query: 235 AVHVHSRNEMGQLLEGLKRMQESLSRTVQAVRSGSEAISTATREIASGNLDLSSRTEQQA 294 + V SR+EMGQLLEG+ +MQ SL+ TV++VR GSE+I+TATR+IA+GN+DLSSRTE+QA Sbjct: 235 PLVVSSRDEMGQLLEGIAKMQRSLTETVRSVRGGSESIATATRQIAAGNVDLSSRTEEQA 294 Query: 295 ASLEETASSMEELTSTVKHNADNARQATTLAVNASTIAADGNAVVGRVVQTMEEIRASSA 354 ++L+ETASSME+LT TV+ NADNARQA+ LA NAS IA G+AVVG+VV TM +I SSA Sbjct: 295 SALQETASSMEQLTGTVRQNADNARQASALAANASEIANKGSAVVGQVVGTMGDINQSSA 354 Query: 355 KITDIVSIIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSSSAAKEIKE 414 KI DI+SII+GIAFQTNILALNAAVEAARAGE+GRGFAVVA EVR+LAQRSS+AAKEIKE Sbjct: 355 KIADIISIIEGIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRSLAQRSSAAAKEIKE 414 Query: 415 LIMHSVDRVQAGSELVGQAGDTMSDVINAVQRVTDIMSEISAASNEQSAGIDQVSHAVTQ 474 LI SV+RVQ+GS LV +AG TMS++I AVQRVTDIM EI++AS EQS GIDQV+ AVTQ Sbjct: 415 LIDTSVERVQSGSALVDEAGRTMSEIIGAVQRVTDIMGEIASASEEQSGGIDQVARAVTQ 474 Query: 475 MDEATQQNAALVEQASAAAKSLEQQAQALMQEVAIFRVNGAGPTVKPPAAAASRATVKPA 534 MDE TQQNAALVE+A+AAA SLE+QA L VA+F+V+ +G A+A Sbjct: 475 MDEVTQQNAALVEEAAAAAASLEEQAARLRSVVAVFQVDDSGRGDHDGASA--------L 526 Query: 535 AKPAMKPASAAPAAP-ATPTAPAAPVAKVAPAVKRPALPAAPAAPKPAGRGVPAGDEGDW 593 A P +P S P A A PA A AV A + PA AG + DW Sbjct: 527 AAPK-RPVSTGPVATRARKLTPATTKAARVAAVAPQLAAAPAPSRAPARSAATAGGDQDW 585 Query: 594 ETF 596 ETF Sbjct: 586 ETF 588 >ref|YP_559016.1| methyl-accepting chemotaxis sensory transducer [Burkholderia xenovorans LB400] gb|ABE30964.1| methyl-accepting chemotaxis sensory transducer [Burkholderia xenovorans LB400] Length = 601 Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust. Identities = 309/607 (50%), Positives = 393/607 (64%), Gaps = 17/607 (2%) Query: 1 MSIKNLSIKAQLAIAILVLAALLVAIGASGLLGMSAAVSINAQLSQERLPKTVAADNTLI 60 M K ++IKA++ + + LAALLVAIG GL GMS + + +P V N + Sbjct: 1 MLNKGITIKARIGLTMAFLAALLVAIGVFGLFGMSRSNHALSDTFTNAMPSAVDIGNAEL 60 Query: 61 WIGRQRTSLDQAA-LTNDPAWA---ERMYGMDANARKEALQWWGKYTALPQTEEGRVLVK 116 + R+R +LD+AA + P A ER GM R + WW +Y LP+ + L + Sbjct: 61 YAARERLALDRAAFMIGTPEAAPTLERARGM----RATSDMWWKQYMDLPREPDEDRLAQ 116 Query: 117 KVSDGIDKTEQELTRFAEVIKAGDRQAIADQARKVGTIYTAMQLDGQALSKYETEQAAQS 176 V + Q+L FA I A D+ + D A+++ Y + AL KY+ A + Sbjct: 117 DVVSRREALHQQLDAFAATIAANDQAKLVDGAKRLQVAYNDLANADDALRKYQFTSAKEG 176 Query: 177 AGASMGRYEASRNFSIVAIVAGLLLAFYSWWSLRRAIGEPMQRALRHFDAIASGDLTEAV 236 A+ +E R S A++ G+L A S+ +L RAI P+ AL +FDAI++GDL V Sbjct: 177 YDAAESSFELFRLISGGALLIGVLAAAISYLALSRAIARPLDAALGYFDAISAGDLRRPV 236 Query: 237 HVHSRNEMGQLLEGLKRMQESLSRTVQAVRSGSEAISTATREIASGNLDLSSRTEQQAAS 296 V SR+EMG+LLEG+ RMQ SL+ TV++VRSGSE+I+TATR+IA+GN+DLSSRTE+QA++ Sbjct: 237 IVTSRDEMGRLLEGIARMQRSLTDTVRSVRSGSESIATATRQIAAGNIDLSSRTEEQASA 296 Query: 297 LEETASSMEELTSTVKHNADNARQATTLAVNASTIAADGNAVVGRVVQTMEEIRASSAKI 356 L++TASSMEELT TV+ NADNARQA++LA NAS IA G+AVV +VV TM +I SSA+I Sbjct: 297 LQQTASSMEELTGTVRQNADNARQASSLAANASEIANKGSAVVDKVVGTMGDINQSSARI 356 Query: 357 TDIVSIIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSSSAAKEIKELI 416 DI+SII+GIAFQTNILALNAAVEAARAGE GRGFAVVA EVR+LAQRSS+AAKEIKELI Sbjct: 357 ADIISIIEGIAFQTNILALNAAVEAARAGEDGRGFAVVAGEVRSLAQRSSAAAKEIKELI 416 Query: 417 MHSVDRVQAGSELVGQAGDTMSDVINAVQRVTDIMSEISAASNEQSAGIDQVSHAVTQMD 476 SV+RVQ+GS LV +AG TM+D+I AVQRVTDIM EI+AAS EQS GIDQV+ AVTQMD Sbjct: 417 DTSVERVQSGSALVDEAGRTMTDIIGAVQRVTDIMGEIAAASEEQSGGIDQVARAVTQMD 476 Query: 477 EATQQNAALVEQASAAAKSLEQQAQALMQEVAIFRVNGAG-------PTVKPPAAAASRA 529 E TQQNAALVE+A+AAA SLE QA L VA+F++ G + PA A RA Sbjct: 477 EVTQQNAALVEEAAAAASSLEDQAGKLRHAVAVFQLEETGYAAPPSAAPKRAPAPAPQRA 536 Query: 530 TVKPAAKPAMKPASAAPAAPATPTAPAAPVAKVAPAVKRPALPAAPAAPKPAGRGVPAGD 589 V SA A AT +AP A A + A PA A A AG Sbjct: 537 VVARKGARTAAAHSAPQGATATASAPVAVTKAPAATPQPAAAPARMPAKAIA--TADAGS 594 Query: 590 EGDWETF 596 + DWETF Sbjct: 595 DHDWETF 601 >ref|YP_003907110.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. CCGE1003] gb|ADN57819.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. CCGE1003] Length = 612 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 317/615 (51%), Positives = 393/615 (63%), Gaps = 27/615 (4%) Query: 4 KNLSIKAQLAIAILVLAALLVAIGASGLLGMSAAVSINAQLSQERLPKTVAADNTLIWIG 63 K +SIKA++ + ++ LAALLV IGA GL GMS + + +P V N ++ Sbjct: 3 KGISIKARIGLTMVFLAALLVGIGAFGLFGMSRSNDAYQETFTNSMPSAVDIGNAELFAA 62 Query: 64 RQRTSLDQAA-LTNDPAWA---ERMYGMDANARKEALQWWGKYTALPQTEEGRVLVKKVS 119 R+R +LD+AA + P A ER M A + K WW KY LP+ E L ++V Sbjct: 63 RERLALDRAAFMMGTPESAPTLERARTMRATSDK----WWQKYMDLPRGPEEDRLAREVI 118 Query: 120 DGIDKTEQELTRFAEVIKAGDRQAIADQARKVGTIYTAMQLDGQALSKYETEQAAQSAGA 179 + Q+ FA V+ AG++ + D A+++ Y + AL K++ + A Sbjct: 119 VKREALHQQADAFAAVVAAGEQGKLVDGAKRMQVAYNELAGADDALRKFQFDAAKAGYDD 178 Query: 180 SMGRYEASRNFSIVAIVAGLLLAFYSWWSLRRAIGEPMQRALRHFDAIASGDLTEAVHVH 239 + R SI A+VAG L A S+ +L RAI P+ AL HFDAIA+GDL V V Sbjct: 179 VQASFHQFRMVSIGALVAGALAALLSYMALSRAIARPLSEALVHFDAIAAGDLRRQVAVT 238 Query: 240 SRNEMGQLLEGLKRMQESLSRTVQAVRSGSEAISTATREIASGNLDLSSRTEQQAASLEE 299 SR+EMGQ+LEG+ +MQ SL TV+AVR GSE+I+TATREIA+GN+DLSSRTE+QA++L++ Sbjct: 239 SRDEMGQILEGIAKMQRSLIETVRAVRGGSESIATATREIAAGNIDLSSRTEEQASALQQ 298 Query: 300 TASSMEELTSTVKHNADNARQATTLAVNASTIAADGNAVVGRVVQTMEEIRASSAKITDI 359 TASSMEELT TVK NADNARQA+ LA NAS IA G+AVVG+VV TM EI SSAKI DI Sbjct: 299 TASSMEELTGTVKQNADNARQASALAANASEIANKGSAVVGQVVGTMGEINQSSAKIADI 358 Query: 360 VSIIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSSSAAKEIKELIMHS 419 +SII+GIAFQTNILALNAAVEAARAGE GRGFAVVA EVR+LAQRSS+AAKEIKELI S Sbjct: 359 ISIIEGIAFQTNILALNAAVEAARAGEDGRGFAVVAGEVRSLAQRSSAAAKEIKELIDTS 418 Query: 420 VDRVQAGSELVGQAGDTMSDVINAVQRVTDIMSEISAASNEQSAGIDQVSHAVTQMDEAT 479 VDRVQ+GS LV +AG TM ++I+AVQRVTDIM EI+AAS EQS GIDQV+ AVTQMDE T Sbjct: 419 VDRVQSGSALVDEAGRTMGEIISAVQRVTDIMGEIAAASEEQSGGIDQVARAVTQMDEVT 478 Query: 480 QQNAALVEQASAAAKSLEQQAQALMQEVAIFRVN------------------GAGPTVKP 521 QQNAALVE+A+AAA SLE QA L Q VA+F++ A +P Sbjct: 479 QQNAALVEEAAAAASSLEDQADKLRQAVAVFQLGDDAGKASASAAAKHVPLRAASAVARP 538 Query: 522 PAAAASRATVKPAAKPAMKPASAAPAAPATPTAPAAPVAKVAPAVKRPALPAAPAAPKPA 581 + AA RA P A A+ A AA A VA A + P A KPA Sbjct: 539 ASRAAGRAGSAPPAAAAVAAQPVTAGHAPAAAAAAASPAPVAAAAAAKSNPVPRATAKPA 598 Query: 582 GRGVPAGDEGDWETF 596 GD+ DWETF Sbjct: 599 AVASVGGDQ-DWETF 612 >ref|ZP_02367805.1| methyl-accepting chemotaxis protein [Burkholderia oklahomensis C6786] Length = 505 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 276/510 (54%), Positives = 366/510 (71%), Gaps = 14/510 (2%) Query: 1 MSIKNLSIKAQLAIAILVLAALLVAIGASGLLGMSAAVSINAQLSQERLPKTVAADNTLI 60 M +KNL+I+ +LA+ + +L+ LL +GA GL GMS A N + ++P + N + Sbjct: 1 MLLKNLTIRTRLAVTMALLSVLLCVVGALGLFGMSRANDANYETFSNQMPSAIDVANAEL 60 Query: 61 WIGRQRTSLDQAAL-------TNDPAWAERMYGMDANARKEALQWWGKYTALPQTEEGRV 113 + R+R LD+AA+ T A +M G+ + WW KY LP++ E Sbjct: 61 FAARERLVLDRAAMLAGTPDATPTIERARQMRGISDS-------WWKKYLDLPRSAEEDR 113 Query: 114 LVKKVSDGIDKTEQELTRFAEVIKAGDRQAIADQARKVGTIYTAMQLDGQALSKYETEQA 173 L + V+ ++EL F +++ A D I A+++ T++ + G+ L ++ +QA Sbjct: 114 LAQDVAAKRQVLQRELDAFVDLVNANDHDKILAAAKRMQTVFNDFAVAGETLRTFQLKQA 173 Query: 174 AQSAGASMGRYEASRNFSIVAIVAGLLLAFYSWWSLRRAIGEPMQRALRHFDAIASGDLT 233 + + + Y ASR SIV+++AGL +AFY + SLR AI P+ AL HFDAIA+G+L Sbjct: 174 SINFNDAQSVYAASRIASIVSLLAGLAIAFYCFLSLRAAIARPLADALGHFDAIAAGELR 233 Query: 234 EAVHVHSRNEMGQLLEGLKRMQESLSRTVQAVRSGSEAISTATREIASGNLDLSSRTEQQ 293 ++ V R+EMG LLEGL +MQ SL+ TV++VR+G E+I+TA ++IA+GN+DLSSRTE+Q Sbjct: 234 RSIVVERRDEMGLLLEGLAKMQTSLADTVRSVRAGGESIATAAKQIAAGNIDLSSRTEEQ 293 Query: 294 AASLEETASSMEELTSTVKHNADNARQATTLAVNASTIAADGNAVVGRVVQTMEEIRASS 353 AA+LEETASSMEELT TV+ NAD+ARQA+ LA +AS IA GNAVVG+VV TM +I SS Sbjct: 294 AAALEETASSMEELTGTVRRNADSARQASALAASASEIANKGNAVVGQVVGTMGDINQSS 353 Query: 354 AKITDIVSIIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSSSAAKEIK 413 AKI DI+SII+GIAFQTNILALNAAVEAARAGE+GRGFAVVA EVR+LAQRSSSAAKEIK Sbjct: 354 AKIADIISIIEGIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRSLAQRSSSAAKEIK 413 Query: 414 ELIMHSVDRVQAGSELVGQAGDTMSDVINAVQRVTDIMSEISAASNEQSAGIDQVSHAVT 473 ELI SV+RV+ GS LV +AG TMS+VI AV+RVTDIM EI+AAS EQS+GIDQVS AV+ Sbjct: 414 ELIDTSVERVRTGSTLVDEAGRTMSEVIGAVRRVTDIMGEIAAASEEQSSGIDQVSRAVS 473 Query: 474 QMDEATQQNAALVEQASAAAKSLEQQAQAL 503 QMDE TQQNAALVE+A+AAA+SL++QA L Sbjct: 474 QMDEVTQQNAALVEEAAAAAQSLDEQAARL 503 >ref|YP_002896601.1| methyl-accepting chemotaxis protein I [Burkholderia pseudomallei MSHR346] gb|ACQ98220.1| methyl-accepting chemotaxis protein I [Burkholderia pseudomallei MSHR346] Length = 626 Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust. Identities = 292/530 (55%), Positives = 376/530 (70%), Gaps = 11/530 (2%) Query: 1 MSIKNLSIKAQLAIAILVLAALLVAIGASGLLGMSAAVSINAQLSQERLPKTVAADNTLI 60 M +KN++I+A+LA+ + +L+ LL A+GA GL GMS A N Q S +LP + + + Sbjct: 1 MLLKNITIRARLAVTMALLSVLLCAVGALGLFGMSRANDANEQTSSNQLPSAIDVASAEL 60 Query: 61 WIGRQRTSLDQAAL---TNDPA-WAERMYGMDANARKEALQWWGKYTALPQTEEGRVLVK 116 + R+R LD+AAL T D A ER M R + WW KY LP+ + LV+ Sbjct: 61 FAARERLVLDRAALLAGTPDVAPTIERARQM----RGVSDSWWKKYLDLPRDAQEDRLVQ 116 Query: 117 KVSDGIDKTEQELTRFAEVIKAGDRQAIADQARKVGTIYTAMQLDGQALSKYETEQAAQS 176 ++ ++EL A +I A DR I + A+++ ++ L +AL ++ +QA+ + Sbjct: 117 DLASKRQILQRELDAAAALINANDRDRILESAKRMQNVFNDFSLASEALRAFQLKQASVN 176 Query: 177 AGASMGRYEASRNFSIVAIVAGLLLAFYSWWSLRRAIGEPMQRALRHFDAIASGDLTEAV 236 + Y ASR SI A+ GL L+ Y + SLR AI P+ AL HFDAIA+G+L + Sbjct: 177 FSDAQSVYAASRVASIAALALGLALSLYCFLSLRAAIARPLADALGHFDAIAAGELRRPI 236 Query: 237 HVHSRNEMGQLLEGLKRMQESLSRTVQAVRSGSEAISTATREIASGNLDLSSRTEQQAAS 296 V R+EMG LLEGL +MQ SL+ TV+AVR GSE+I+TA R+IA+GN+DLSSRTE+QAA+ Sbjct: 237 VVERRDEMGLLLEGLAKMQASLAGTVRAVRVGSESIATAARQIAAGNIDLSSRTEEQAAA 296 Query: 297 LEETASSMEELTSTVKHNADNARQATTLAVNASTIAADGNAVVGRVVQTMEEIRASSAKI 356 LE+TASSMEELT TV+ NADNARQA+ LA +AS IA GNAVVG+VV TM +I SSAKI Sbjct: 297 LEQTASSMEELTGTVRRNADNARQASALAASASEIANKGNAVVGQVVGTMGDINQSSAKI 356 Query: 357 TDIVSIIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSSSAAKEIKELI 416 DI++II+GIAFQTNILALNAAVEAARAGE+GRGFAVVA EVR+LAQRSS+AAKEIKELI Sbjct: 357 ADIITIIEGIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRSLAQRSSTAAKEIKELI 416 Query: 417 MHSVDRVQAGSELVGQAGDTMSDVINAVQRVTDIMSEISAASNEQSAGIDQVSHAVTQMD 476 SV+RV+ GS LV AG TMS+VI AV+RVTDIM EI+AAS+EQS GIDQVS AV+QMD Sbjct: 417 DTSVERVRTGSMLVDDAGRTMSEVIGAVRRVTDIMGEIAAASDEQSTGIDQVSRAVSQMD 476 Query: 477 EATQQNAALVEQASAAAKSLEQQAQALMQEVAIFRV-NGAGPTV--KPPA 523 E TQQNAALVEQA+AAA+SL++QA L V++F V +G V +PPA Sbjct: 477 EVTQQNAALVEQAAAAAQSLDEQAARLRATVSVFHVDDGDARDVASRPPA 526