BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0254.p (181 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774691.1| aromatic compounds catabolic protein [Herbas... 364 3e-99 ref|YP_004687725.1| aromatic compounds catabolic protein [Cupria... 280 9e-74 ref|YP_550352.1| phenylacetic acid degradation-like protein [Pol... 224 5e-57 ref|YP_983199.1| hypothetical protein Pnap_2979 [Polaromonas nap... 222 2e-56 ref|YP_522957.1| phenylacetic acid degradation-like protein [Rho... 201 5e-50 ref|YP_004490075.1| phenylacetic acid degradation-like protein [... 199 1e-49 ref|YP_001562925.1| thioesterase superfamily protein [Delftia ac... 198 3e-49 gb|ADU90678.1| putative thioesterase superfamily protein [Collim... 194 4e-48 ref|YP_004235115.1| phenylacetic acid degradation-like protein [... 193 9e-48 ref|ZP_08405741.1| phenylacetic acid degradation-like protein [H... 192 3e-47 >ref|YP_003774691.1| aromatic compounds catabolic protein [Herbaspirillum seropedicae SmR1] gb|ADJ62783.1| aromatic compounds catabolic protein [Herbaspirillum seropedicae SmR1] Length = 181 Score = 364 bits (935), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 178/180 (98%), Positives = 178/180 (98%) Query: 1 MDAEKQASVWTDQQAAALQRERDGGGAPGVARMEQIAGKSGMEILSAMMSGALPSPPMNE 60 MDAEKQASVWTDQQAAALQRERDGGGA GVARMEQIAGKSGMEILSAMMSGALPSPPMNE Sbjct: 1 MDAEKQASVWTDQQAAALQRERDGGGALGVARMEQIAGKSGMEILSAMMSGALPSPPMNE 60 Query: 61 TMNMTLLELDEGSAVFQGIPLLRHFNPMGTVHGGWFATLLDSALGCAVQTTLPAGQSYTT 120 TMNMTLLELDEGSAVFQGIPLLRHFNPMGTVHGGWFATLLDSALGCAVQTTLPAGQSYTT Sbjct: 61 TMNMTLLELDEGSAVFQGIPLLRHFNPMGTVHGGWFATLLDSALGCAVQTTLPAGQSYTT 120 Query: 121 VELSVNIVRAASQQTGPLRAAARVLHRGRQMATAEASIKDESGRLYAHATTTCFVFKAPV 180 VELSVNIVRAASQQTGPLRAAARVLHRG QMATAEASIKDESGRLYAHATTTCFVFKAPV Sbjct: 121 VELSVNIVRAASQQTGPLRAAARVLHRGSQMATAEASIKDESGRLYAHATTTCFVFKAPV 180 >ref|YP_004687725.1| aromatic compounds catabolic protein [Cupriavidus necator N-1] gb|AEI81687.1| aromatic compounds catabolic protein [Cupriavidus necator N-1] Length = 181 Score = 280 bits (715), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 129/181 (71%), Positives = 152/181 (83%) Query: 1 MDAEKQASVWTDQQAAALQRERDGGGAPGVARMEQIAGKSGMEILSAMMSGALPSPPMNE 60 M+ +++ VW QQ+ A QR R GGGAPG+AR++Q+AGKSG+EIL AMMSG LP PPMNE Sbjct: 1 MENNQESLVWISQQSDAKQRIRKGGGAPGLARIDQVAGKSGLEILEAMMSGQLPYPPMNE 60 Query: 61 TMNMTLLELDEGSAVFQGIPLLRHFNPMGTVHGGWFATLLDSALGCAVQTTLPAGQSYTT 120 TMNMTLLE+D G AVFQGIPL +H+NP+GTVHGGWFATLLDSALGC+VQT LPA +SYTT Sbjct: 61 TMNMTLLEVDNGRAVFQGIPLRQHYNPLGTVHGGWFATLLDSALGCSVQTMLPARRSYTT 120 Query: 121 VELSVNIVRAASQQTGPLRAAARVLHRGRQMATAEASIKDESGRLYAHATTTCFVFKAPV 180 ELS+NIVRAAS +TGPLR A V+H GRQ+ATAEA ++D G+LYAHATTTCFVF P Sbjct: 121 AELSINIVRAASHKTGPLRGVATVVHSGRQIATAEARVEDAKGKLYAHATTTCFVFDVPA 180 Query: 181 A 181 A Sbjct: 181 A 181 >ref|YP_550352.1| phenylacetic acid degradation-like protein [Polaromonas sp. JS666] gb|ABE45454.1| Phenylacetic acid degradation-related protein [Polaromonas sp. JS666] Length = 185 Score = 224 bits (570), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 102/170 (60%), Positives = 131/170 (77%) Query: 10 WTDQQAAALQRERDGGGAPGVARMEQIAGKSGMEILSAMMSGALPSPPMNETMNMTLLEL 69 W +Q AA R GGG PG+A EQ+AGK+GME++ AM++G P P + ET++ L+E+ Sbjct: 13 WQEQSAAVRARMLAGGGKPGLAGPEQVAGKTGMEVMQAMLAGEFPYPHIAETLDFALIEV 72 Query: 70 DEGSAVFQGIPLLRHFNPMGTVHGGWFATLLDSALGCAVQTTLPAGQSYTTVELSVNIVR 129 + G A+FQG P L+H+NP+GTVHGGW+ATLLDSA+GCAV T +PAG++YTT ELS+NIVR Sbjct: 73 EPGKAIFQGTPQLKHYNPLGTVHGGWYATLLDSAVGCAVHTMMPAGRAYTTAELSLNIVR 132 Query: 130 AASQQTGPLRAAARVLHRGRQMATAEASIKDESGRLYAHATTTCFVFKAP 179 AAS Q+GPLRA V+H GRQ+ATAE I G+LYAHATTTC VF+ P Sbjct: 133 AASHQSGPLRAIGTVIHCGRQLATAEGRIVGPDGKLYAHATTTCLVFELP 182 >ref|YP_983199.1| hypothetical protein Pnap_2979 [Polaromonas naphthalenivorans CJ2] gb|ABM38278.1| uncharacterized domain 1 [Polaromonas naphthalenivorans CJ2] Length = 182 Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 103/179 (57%), Positives = 134/179 (74%) Query: 1 MDAEKQASVWTDQQAAALQRERDGGGAPGVARMEQIAGKSGMEILSAMMSGALPSPPMNE 60 M ++ + W ++ AA GGG PG+AR E +AGK+G+EI+ AM++GALP P + E Sbjct: 1 MTSQATLTHWIEESAAVRAGMLAGGGKPGLARPESVAGKTGLEIMQAMLAGALPYPHIAE 60 Query: 61 TMNMTLLELDEGSAVFQGIPLLRHFNPMGTVHGGWFATLLDSALGCAVQTTLPAGQSYTT 120 T++ +L+ ++ G AVFQG P L+H+NP+GTVHGGW+ATLLDSA+GCAV T +PAG+ YTT Sbjct: 61 TLDFSLITVEPGKAVFQGTPQLKHYNPLGTVHGGWYATLLDSAVGCAVHTLMPAGRGYTT 120 Query: 121 VELSVNIVRAASQQTGPLRAAARVLHRGRQMATAEASIKDESGRLYAHATTTCFVFKAP 179 ELSVNIVRAA+ TGPLRA V+H GRQ+ATAE I G+LYAHATTTC VF+ P Sbjct: 121 AELSVNIVRAATHATGPLRAIGTVIHCGRQLATAEGRIVGPDGKLYAHATTTCLVFELP 179 >ref|YP_522957.1| phenylacetic acid degradation-like protein [Rhodoferax ferrireducens T118] gb|ABD69426.1| Phenylacetic acid degradation-related protein [Rhodoferax ferrireducens T118] Length = 193 Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 94/157 (59%), Positives = 118/157 (75%) Query: 23 DGGGAPGVARMEQIAGKSGMEILSAMMSGALPSPPMNETMNMTLLELDEGSAVFQGIPLL 82 D G PGVAR +QIAGK+G+E++ AM+ G LP PP+ +T++ T+LE+ G A+FQG P + Sbjct: 32 DAGAGPGVARADQIAGKTGLELMQAMLRGELPYPPIAQTLDFTILEVGPGRALFQGAPGV 91 Query: 83 RHFNPMGTVHGGWFATLLDSALGCAVQTTLPAGQSYTTVELSVNIVRAASQQTGPLRAAA 142 H NPMGTVHGGWFATLLDSALGCAVQT + GQ YTT ELSVN +RA + + +RA Sbjct: 92 AHLNPMGTVHGGWFATLLDSALGCAVQTRMAPGQGYTTAELSVNYLRALTPKVSRVRAEG 151 Query: 143 RVLHRGRQMATAEASIKDESGRLYAHATTTCFVFKAP 179 +V+H GRQ+ATAEA + G LYAHATTTC VF+ P Sbjct: 152 KVIHCGRQLATAEARLIGADGSLYAHATTTCLVFEMP 188 >ref|YP_004490075.1| phenylacetic acid degradation-like protein [Delftia sp. Cs1-4] gb|AEF91720.1| phenylacetic acid degradation-related protein [Delftia sp. Cs1-4] Length = 202 Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 98/172 (56%), Positives = 123/172 (71%), Gaps = 1/172 (0%) Query: 10 WTDQQAAALQRERDGGGAPGVARMEQIAGKSGMEILSAMMSGALPSPPMNETMNMTLLEL 69 W D++ A R G GA GV+R +Q+AG+SG+E++ AM+ G LP PP+ T++ L+ + Sbjct: 31 WLDEEQAVTLRLDAGPGA-GVSRPDQVAGRSGLELMQAMLRGELPYPPIARTLDFMLISV 89 Query: 70 DEGSAVFQGIPLLRHFNPMGTVHGGWFATLLDSALGCAVQTTLPAGQSYTTVELSVNIVR 129 EGSAVFQG P H NPMGTVHGGWFATLLDSALGCAV T +P G+ YTT EL VN+V+ Sbjct: 90 GEGSAVFQGRPGANHLNPMGTVHGGWFATLLDSALGCAVHTCMPPGRGYTTAELGVNLVK 149 Query: 130 AASQQTGPLRAAARVLHRGRQMATAEASIKDESGRLYAHATTTCFVFKAPVA 181 A + + +RA RVLH GRQ+ATAEA + G LYAHATTTC VF+ P A Sbjct: 150 ALTPRVPRVRAEGRVLHCGRQLATAEARLVGPDGTLYAHATTTCLVFEMPPA 201 >ref|YP_001562925.1| thioesterase superfamily protein [Delftia acidovorans SPH-1] gb|ABX34540.1| thioesterase superfamily protein [Delftia acidovorans SPH-1] Length = 204 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 97/172 (56%), Positives = 123/172 (71%), Gaps = 1/172 (0%) Query: 10 WTDQQAAALQRERDGGGAPGVARMEQIAGKSGMEILSAMMSGALPSPPMNETMNMTLLEL 69 W D++ A R G GA GV+R +Q+AG+SG+E++ AM+ G LP PP+ T++ L+ + Sbjct: 33 WLDEEQAVTLRLDAGPGA-GVSRPDQVAGRSGLELMQAMLRGELPYPPIARTLDFMLISV 91 Query: 70 DEGSAVFQGIPLLRHFNPMGTVHGGWFATLLDSALGCAVQTTLPAGQSYTTVELSVNIVR 129 EG+AVFQG P H NPMGTVHGGWFATLLDSALGCAV T +P G+ YTT EL VN+V+ Sbjct: 92 GEGNAVFQGRPGANHLNPMGTVHGGWFATLLDSALGCAVHTCMPPGRGYTTAELGVNLVK 151 Query: 130 AASQQTGPLRAAARVLHRGRQMATAEASIKDESGRLYAHATTTCFVFKAPVA 181 A + + +RA RVLH GRQ+ATAEA + G LYAHATTTC VF+ P A Sbjct: 152 ALTPRVPRVRAEGRVLHCGRQLATAEARLVGPDGTLYAHATTTCLVFEMPPA 203 >gb|ADU90678.1| putative thioesterase superfamily protein [Collimonas sp. MPS11E8] Length = 176 Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 90/170 (52%), Positives = 122/170 (71%), Gaps = 4/170 (2%) Query: 10 WTDQQAAALQRERDGGGAPGVARMEQIAGKSGMEILSAMMSGALPSPPMNETMNMTLLEL 69 W Q+AA R + G PGVA +EQ+ SG+E L ++ G LP PP+ +T++ TLLE Sbjct: 11 WQSQEAAV--RAKLAG--PGVASLEQLKQYSGVEFLQRILDGELPIPPIAQTLDFTLLEA 66 Query: 70 DEGSAVFQGIPLLRHFNPMGTVHGGWFATLLDSALGCAVQTTLPAGQSYTTVELSVNIVR 129 + G +FQG P +RH+NP+G+VHGG+F TLLDSALGCAVQ+TLP G YTT+EL VN++R Sbjct: 67 EPGRVIFQGTPDMRHYNPIGSVHGGYFCTLLDSALGCAVQSTLPKGSGYTTLELKVNLIR 126 Query: 130 AASQQTGPLRAAARVLHRGRQMATAEASIKDESGRLYAHATTTCFVFKAP 179 A + +TGP+RA +V+ G ++ AEA+I D G++YAHATTTC VF P Sbjct: 127 ALTDKTGPVRAIGKVIQVGGRVGVAEANIVDVDGKIYAHATTTCLVFALP 176 >ref|YP_004235115.1| phenylacetic acid degradation-like protein [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX46548.1| phenylacetic acid degradation-related protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 194 Score = 193 bits (491), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 93/172 (54%), Positives = 121/172 (70%), Gaps = 1/172 (0%) Query: 10 WTDQQAAALQRERDGGGAPGVARMEQIAGKSGMEILSAMMSGALPSPPMNETMNMTLLEL 69 W D++ A +Q D G PGV R EQ AG++G+E++ AM+ G +P PP+ +T++ L+ + Sbjct: 23 WLDEERA-VQARLDAGPGPGVIRPEQAAGRNGLELMQAMLRGEVPYPPIAQTLDFLLISV 81 Query: 70 DEGSAVFQGIPLLRHFNPMGTVHGGWFATLLDSALGCAVQTTLPAGQSYTTVELSVNIVR 129 +GSAVFQG P H NPM VHGGWFATLLDSALGCAV T +P G+SYTT ELS+N+V+ Sbjct: 82 GDGSAVFQGRPGTAHLNPMNGVHGGWFATLLDSALGCAVHTRMPPGRSYTTAELSINLVK 141 Query: 130 AASQQTGPLRAAARVLHRGRQMATAEASIKDESGRLYAHATTTCFVFKAPVA 181 + + +RA RVLH GRQ+ATAEA + G LYAHATTTC VF P + Sbjct: 142 GLTPRVPRVRAEGRVLHCGRQLATAEARLVGADGTLYAHATTTCLVFDMPAS 193 >ref|ZP_08405741.1| phenylacetic acid degradation-like protein [Hylemonella gracilis ATCC 19624] gb|EGI77180.1| phenylacetic acid degradation-like protein [Hylemonella gracilis ATCC 19624] Length = 185 Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 96/158 (60%), Positives = 117/158 (74%), Gaps = 4/158 (2%) Query: 21 ERDGGGAPGVARMEQIAGKSGMEILSAMMSGALPSPPMNETMNMTLLELDEGSAVFQGIP 80 ER G PGVAR +QIAGKSG+E+L AM+ G LP PP+ +T++ LLE + A+FQG P Sbjct: 27 ERSG---PGVARPDQIAGKSGLELLHAMLRGELPYPPIAQTLSFLLLEAEADRALFQGAP 83 Query: 81 LLRHFNPMGTVHGGWFATLLDSALGCAVQTTLPAGQSYTTVELSVNIVRAASQQTGP-LR 139 H NPMGT+HGGW+ATLLDSALGCAVQT LP GQ+YTT EL +NIV+A + P +R Sbjct: 84 GAAHLNPMGTIHGGWYATLLDSALGCAVQTRLPTGQAYTTAELGLNIVKAINPAKTPRVR 143 Query: 140 AAARVLHRGRQMATAEASIKDESGRLYAHATTTCFVFK 177 A A VLH GRQ+ATA+A + G LYAHATTTC VF+ Sbjct: 144 AEATVLHCGRQLATAQARLYGPDGTLYAHATTTCLVFE 181