BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0251.p (431 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774693.1| citrate synthase [Herbaspirillum seropedicae... 851 0.0 ref|YP_004234577.1| Citrate synthase [Acidovorax avenae subsp. a... 652 0.0 ref|YP_371906.1| citrate synthase [Burkholderia sp. 383] >gi|779... 652 0.0 gb|EGP43232.1| citrate synthase [Achromobacter xylosoxidans AXX-A] 511 e-143 ref|YP_001565922.1| citrate synthase [Delftia acidovorans SPH-1]... 451 e-124 ref|YP_004487318.1| Citrate synthase [Delftia sp. Cs1-4] >gi|333... 450 e-124 ref|ZP_02168553.1| Citrate synthase [Hoeflea phototrophica DFL-4... 417 e-114 ref|YP_001901115.1| excisionase family DNA binding domain-contai... 394 e-107 ref|YP_002983178.1| excisionase family DNA binding domain-contai... 389 e-106 ref|ZP_07675125.1| citrate (Si)-synthase [Ralstonia sp. 5_7_47FA... 385 e-105 >ref|YP_003774693.1| citrate synthase [Herbaspirillum seropedicae SmR1] gb|ADJ62785.1| citrate synthase protein [Herbaspirillum seropedicae SmR1] Length = 431 Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/431 (98%), Positives = 425/431 (98%) Query: 1 MSNYLNSTEAAARLGVSRQTLYAYVSRGLLHAEPGATARESRYFAADVERVAAQRAHGRK 60 MSNYLNSTEAAARLGVSRQTLYAYVSRGLLHAEPGATARESRYFAADVERVAAQRAHGRK Sbjct: 1 MSNYLNSTEAAARLGVSRQTLYAYVSRGLLHAEPGATARESRYFAADVERVAAQRAHGRK 60 Query: 61 PKEVAKAALNWGAPVLESSITLIDSGRLFYRGVDALSLAEHASLEEVAAGLWQCDRQTAF 120 PKEVAKAALNWGAPVLESSITLID GRLFYRGVDALSLAEHASLEEVAAGLWQCDR+TAF Sbjct: 61 PKEVAKAALNWGAPVLESSITLIDGGRLFYRGVDALSLAEHASLEEVAAGLWQCDRRTAF 120 Query: 121 GPHSAASPTVLRALFRHYGDQRAEEVLLPLFAVASDDASTAIWQKAVERQAQGCGDLVRI 180 GPH AASP VLRALFRHYGDQRAEEVLLPLFAVASDDASTAIWQKAVERQAQGCGDLVRI Sbjct: 121 GPHGAASPAVLRALFRHYGDQRAEEVLLPLFAVASDDASTAIWQKAVERQAQGCGDLVRI 180 Query: 181 LAACLLRTRPDTSPIHVQCARAWDVGRAGAELIRMALVLCADHELNASTFTSRCVASTDA 240 LAACLLRTRPDTSPIHVQCARAW VGRAG ELIRMALVLCADHELNAS+FTSRCVASTDA Sbjct: 181 LAACLLRTRPDTSPIHVQCARAWGVGRAGGELIRMALVLCADHELNASSFTSRCVASTDA 240 Query: 241 SLRAVVIAGLAGLSGGRHGATTGRVEALWDELGTRDVDRKMRERLSRGDDLPGFGHTLYP 300 SLRAVVIAGLAGLSGGRHGATTGRVEALWDELGTRDVDRKMRERLSRGDDLPGFGHTLYP Sbjct: 241 SLRAVVIAGLAGLSGGRHGATTGRVEALWDELGTRDVDRKMRERLSRGDDLPGFGHTLYP 300 Query: 301 DGDPRASYLLSQILPRHSPWAAMIDAGITLTGQKPSVDFALVALRRHLRLPVGAAFGLFA 360 DGDPRASYLLSQILPRHSPWAAMIDAGITLTGQKPSVDFALVALRRHLRLPVGAAFGLFA Sbjct: 301 DGDPRASYLLSQILPRHSPWAAMIDAGITLTGQKPSVDFALVALRRHLRLPVGAAFGLFA 360 Query: 361 LGRSIGWIAHGLEQREQHHLIRPRAVYIGPQPEDGQAEPGRPRSRARSANRQTQQGSVPK 420 LGRSIGWIAHGLEQREQHHLIRPRAVYIGPQPEDGQAEPGRPRSRARSA RQTQQGSVPK Sbjct: 361 LGRSIGWIAHGLEQREQHHLIRPRAVYIGPQPEDGQAEPGRPRSRARSAGRQTQQGSVPK 420 Query: 421 GDLPAGFFKTR 431 GDLPAGFFKTR Sbjct: 421 GDLPAGFFKTR 431 >ref|YP_004234577.1| Citrate synthase [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX46010.1| Citrate synthase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 428 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/431 (79%), Positives = 367/431 (85%), Gaps = 5/431 (1%) Query: 1 MSNYLNSTEAAARLGVSRQTLYAYVSRGLLHAEPGATARESRYFAADVERVAAQRAHGRK 60 M NYLNS+EAAARLGVSRQTLYAYVSRGLLHAE G RESRY AAD++R AAQRA GRK Sbjct: 1 MPNYLNSSEAAARLGVSRQTLYAYVSRGLLHAEHGDNPRESRYLAADIDRFAAQRARGRK 60 Query: 61 PKEVAKAALNWGAPVLESSITLIDSGRLFYRGVDALSLAEHASLEEVAAGLWQCDRQTAF 120 PKEVAKAALNWG PVLES ITLID GRLFYRGVDAL LA+HASLE+VAA LWQC RQ AF Sbjct: 61 PKEVAKAALNWGTPVLESGITLIDGGRLFYRGVDALGLADHASLEDVAALLWQCHRQAAF 120 Query: 121 GPHSAASPTVLRALFRHYGDQRAEEVLLPLFAVASDDASTAIWQKAVERQAQGCGDLVRI 180 GP +AA+P VLR+LFRHY QRAEE LLPLFAVASDDASTAIWQKA RQAQGCGDLVRI Sbjct: 121 GPRAAAAPAVLRSLFRHYQAQRAEEALLPLFAVASDDASTAIWQKAAGRQAQGCGDLVRI 180 Query: 181 LAACLLRTRPDTSPIHVQCARAWDVGRAGAELIRMALVLCADHELNASTFTSRCVASTDA 240 LAACLLRTRPDT PIH QCARAW + AGAELIR ALVL ADHELNASTFT RCVASTDA Sbjct: 181 LAACLLRTRPDTRPIHEQCARAWGLDPAGAELIRKALVLGADHELNASTFTGRCVASTDA 240 Query: 241 SLRAVVIAGLAGLSGGRHGATTGRVEALWDELGTRDVDRKMRERLSRGDDLPGFGHTLYP 300 SLRAVVI GLAGLSGGRHGATT RVEALWDELGTRD++R+MR+RLSRGDDLPGFGH+LYP Sbjct: 241 SLRAVVIGGLAGLSGGRHGATTARVEALWDELGTRDIERRMRDRLSRGDDLPGFGHSLYP 300 Query: 301 DGDPRASYLLSQILPRHSPWAAMIDAGITLTGQKPSVDFALVALRRHLRLPVGAAFGLFA 360 DGD RA+YLL++++PRH PWA MIDAG L GQKPS+D ALVALRRHLRLP+GAAFGLFA Sbjct: 301 DGDARAAYLLARLMPRHPPWARMIDAGTALVGQKPSMDLALVALRRHLRLPMGAAFGLFA 360 Query: 361 LGRSIGWIAHGLEQREQHHLIRPRAVYIGPQPEDGQAEPGRPRSRARSANRQTQQGSVPK 420 LGRSIGWIAHGLEQR Q LIRPRAVY+GP E G+PR+ RS R T + P Sbjct: 361 LGRSIGWIAHGLEQRGQPGLIRPRAVYVGP-----PVELGKPRAHGRSPQRPTPPHAAPG 415 Query: 421 GDLPAGFFKTR 431 DL A FF+ R Sbjct: 416 NDLAAAFFRPR 426 >ref|YP_371906.1| citrate synthase [Burkholderia sp. 383] gb|ABB11262.1| Citrate synthase [Burkholderia sp. 383] Length = 429 Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/431 (76%), Positives = 361/431 (83%), Gaps = 2/431 (0%) Query: 1 MSNYLNSTEAAARLGVSRQTLYAYVSRGLLHAEPGATARESRYFAADVERVAAQRAHGRK 60 MSNYLNSTEAAARLGVSRQTLYAYVSRGLL AEPG++ RESRY AADV+R+A QRA G K Sbjct: 1 MSNYLNSTEAAARLGVSRQTLYAYVSRGLLRAEPGSSHRESRYLAADVDRLADQRARGHK 60 Query: 61 PKEVAKAALNWGAPVLESSITLIDSGRLFYRGVDALSLAEHASLEEVAAGLWQCDRQTAF 120 PKEVAKAALNWG+PVLESSITLID GRLFYRGVDAL LA ASLE+VAA LW+CD QTAF Sbjct: 61 PKEVAKAALNWGSPVLESSITLIDGGRLFYRGVDALELATRASLEDVAALLWRCDEQTAF 120 Query: 121 GPHSAASPTVLRALFRHYGDQRAEEVLLPLFAVASDDASTAIWQKAVERQAQGCGDLVRI 180 G +P+VLR LFRHY +QRAE+ LLPLF VAS+DA TAIW ++ +R AQGCGDLVRI Sbjct: 121 GRRVPTTPSVLRTLFRHYDNQRAEQALLPLFTVASEDAPTAIWHQSADRHAQGCGDLVRI 180 Query: 181 LAACLLRTRPDTSPIHVQCARAWDVGRAGAELIRMALVLCADHELNASTFTSRCVASTDA 240 LAACLLRTR DT+PIH QCARAW VG AGAELIRMALVLCADHELNAS+FT RC+AST+A Sbjct: 181 LAACLLRTRIDTAPIHEQCARAWGVGPAGAELIRMALVLCADHELNASSFTGRCIASTNA 240 Query: 241 SLRAVVIAGLAGLSGGRHGATTGRVEALWDELGTRDVDRKMRERLSRGDDLPGFGHTLYP 300 SLRAVV+ GLAGLSG RHGA T R EALWDELG +DV++KM ERL+RGD LPGFGH LYP Sbjct: 241 SLRAVVVGGLAGLSGERHGAATARGEALWDELGNKDVEQKMGERLARGDGLPGFGHALYP 300 Query: 301 DGDPRASYLLSQILPRHSPWAAMIDAGITLTGQKPSVDFALVALRRHLRLPVGAAFGLFA 360 DGD RA+YLLS+ILPRH W MIDAG L GQKPS+D ALVALRRHLRLPVGAAFGLFA Sbjct: 301 DGDVRATYLLSRILPRHPQWKRMIDAGSALVGQKPSLDLALVALRRHLRLPVGAAFGLFA 360 Query: 361 LGRSIGWIAHGLEQREQHHLIRPRAVYIGPQPEDGQAEPGRPRSRARSANRQTQQGSVPK 420 LGRSIGWIAHGLEQREQ LIRPRAVY G P+ A+ RSR RS +QT Q + PK Sbjct: 361 LGRSIGWIAHGLEQREQSDLIRPRAVYTGTWPDGAGAD--HARSRGRSGKQQTTQAAAPK 418 Query: 421 GDLPAGFFKTR 431 D+ A FF+ R Sbjct: 419 DDMLAAFFRNR 429 >gb|EGP43232.1| citrate synthase [Achromobacter xylosoxidans AXX-A] Length = 403 Score = 511 bits (1317), Expect = e-143, Method: Compositional matrix adjust. Identities = 271/401 (67%), Positives = 311/401 (77%), Gaps = 8/401 (1%) Query: 1 MSNYLNSTEAAARLGVSRQTLYAYVSRGLLHAEPGATARESRYFAADVERVAAQRAHGRK 60 M +YL S AAARLGVSRQTLYAYVSRGLLHAE GAT RESRY A DVER+AAQR GRK Sbjct: 1 MPDYLTSAAAAARLGVSRQTLYAYVSRGLLHAEAGATPRESRYLAEDVERLAAQRTRGRK 60 Query: 61 PKEVAKAALNWGAPVLESSITLIDSGRLFYRGVDALSLAEHASLEEVAAGLWQCDRQTAF 120 PKEVAKA LNWG PVLES+ITLID G+LFYRG A++LA S+E VAA LWQCD AF Sbjct: 61 PKEVAKATLNWGLPVLESAITLIDDGQLFYRGESAVALAASRSVEAVAAHLWQCDEAMAF 120 Query: 121 GPHSAASPTVLRALFRHYGDQRAEEVLLPLFAVASDDASTAIWQKAVERQAQGCGDLVRI 180 + P L ALF + QRAE LLPLF ASDD +TA+WQ++ +RQAQGCG LVR Sbjct: 121 DAPAPVLPRDLAALFARHRGQRAEAALLPLFTAASDDDATALWQRSPQRQAQGCGALVRT 180 Query: 181 LAACLLRTRPDTSPIHVQCARAWDVGRAGAELIRMALVLCADHELNASTFTSRCVASTDA 240 LAACLL+T PD +PIHVQCARAW AGA+LIRMALVLCADHELNAS+FT+RC+AST A Sbjct: 181 LAACLLQTAPDAAPIHVQCARAWGADAAGADLIRMALVLCADHELNASSFTARCIASTGA 240 Query: 241 SLRAVVIAGLAGLSGGRHGATTGRVEALWDEL--------GTRDVDRKMRERLSRGDDLP 292 SLRA ++ GLA L+GGRHG TT R EA+WDEL G + + R +RERL+RG+DLP Sbjct: 241 SLRAGIVGGLAALTGGRHGGTTARGEAMWDELERGDGGADGGQRLARGLRERLARGEDLP 300 Query: 293 GFGHTLYPDGDPRASYLLSQILPRHSPWAAMIDAGITLTGQKPSVDFALVALRRHLRLPV 352 GFGH LYP GDPRAS LL++ILP+ W A+I+ L GQ+PSVDFALVA+RRHL LP+ Sbjct: 301 GFGHHLYPAGDPRASALLARILPQRPDWQALIEQAFELIGQRPSVDFALVAVRRHLGLPL 360 Query: 353 GAAFGLFALGRSIGWIAHGLEQREQHHLIRPRAVYIGPQPE 393 GAAFGLFALGRSIGW+AHGLEQR +IRPRA Y G P+ Sbjct: 361 GAAFGLFALGRSIGWLAHGLEQRGSPDVIRPRAAYTGVHPD 401 >ref|YP_001565922.1| citrate synthase [Delftia acidovorans SPH-1] gb|ABX37537.1| Citrate synthase [Delftia acidovorans SPH-1] Length = 397 Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust. Identities = 249/392 (63%), Positives = 292/392 (74%), Gaps = 1/392 (0%) Query: 1 MSNYLNSTEAAARLGVSRQTLYAYVSRGLLHAEPGATARESRYFAADVERVAAQRAHGRK 60 M +YLNSTEA A LGVSR TLYAYVSRGLLHA T RESRY +VE++A QR GRK Sbjct: 1 MPDYLNSTEATALLGVSRATLYAYVSRGLLHAHAADTPRESRYLREEVEQLARQRGQGRK 60 Query: 61 PKEVAKAALNWGAPVLESSITLIDSGRLFYRGVDALSLAEHASLEEVAAGLWQCDRQTAF 120 P+EVA+AALNWG PVLESSITLI+ GRL+YRG DA+ A +LEE AA LWQ AF Sbjct: 61 PREVAQAALNWGLPVLESSITLIEQGRLYYRGEDAVDWARSHTLEEAAALLWQYPADAAF 120 Query: 121 GPHSAASPTVLRALFRHYGDQRAEEVLLPLFAVASDDASTAIWQKAVERQAQGCGDLVRI 180 H+ + VL L + Q E LL LF VASDDA+TA WQ++ ER A GCG L+R+ Sbjct: 121 AAHAVEAAPVLADLQQRMAGQPCENTLLALFTVASDDAATAAWQQSPERLAAGCGALLRL 180 Query: 181 LAACLLRTRPDTSPIHVQCARAWDVGRAGAELIRMALVLCADHELNASTFTSRCVASTDA 240 LAACLL T PD +PIH+QCA+AW + GA+L+RMALVLCADHELNAS FT+RCVAST A Sbjct: 181 LAACLLGTAPDKAPIHLQCAQAWALDTQGADLVRMALVLCADHELNASGFTARCVASTGA 240 Query: 241 SLRAVVIAGLAGLSGGRHGATTGRVEALWDELGTRDVDRKMRERLSRGDDLPGFGHTLYP 300 SLRA V+ GLA L+GGRHG TT RVEALWDELG ++R+RL+RG+ LPGFGH LYP Sbjct: 241 SLRAAVVGGLAALTGGRHGGTTARVEALWDELGEAQAPARLRQRLARGETLPGFGHHLYP 300 Query: 301 DGDPRASYLLSQILPRHSPWAAMIDAGITLTGQKPSVDFALVALRRHLRLPVGAAFGLFA 360 +GD RA+ LL ++LPR P AA+ + LTG PSVDFALVALRRHL+LP G+AFGLFA Sbjct: 301 EGDVRAALLL-EMLPRQGPAAALAAEVMALTGLAPSVDFALVALRRHLQLPTGSAFGLFA 359 Query: 361 LGRSIGWIAHGLEQREQHHLIRPRAVYIGPQP 392 LGR GW+A LEQR +IRPRA Y GP+P Sbjct: 360 LGRCAGWLAQALEQRATRQIIRPRAAYTGPRP 391 >ref|YP_004487318.1| Citrate synthase [Delftia sp. Cs1-4] gb|AEF88963.1| Citrate synthase [Delftia sp. Cs1-4] Length = 397 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 249/392 (63%), Positives = 292/392 (74%), Gaps = 1/392 (0%) Query: 1 MSNYLNSTEAAARLGVSRQTLYAYVSRGLLHAEPGATARESRYFAADVERVAAQRAHGRK 60 M +YLNSTEA A LGVSR TLYAYVSRGLLHA T RESRY +VE++A QR GRK Sbjct: 1 MPDYLNSTEATALLGVSRATLYAYVSRGLLHAHAADTPRESRYLREEVEQLARQRGQGRK 60 Query: 61 PKEVAKAALNWGAPVLESSITLIDSGRLFYRGVDALSLAEHASLEEVAAGLWQCDRQTAF 120 P+EVA+AALNWG PVLESSITLI+ GRL+YRG DA+ A +LEE AA LWQ AF Sbjct: 61 PREVAQAALNWGLPVLESSITLIEQGRLYYRGEDAVDWARAHTLEETAALLWQYPADAAF 120 Query: 121 GPHSAASPTVLRALFRHYGDQRAEEVLLPLFAVASDDASTAIWQKAVERQAQGCGDLVRI 180 H+ + VL L + Q E LL LF VASDDA+TA WQ++ ER A GCG L+R+ Sbjct: 121 AAHAVEAAPVLPDLQQRMAGQPCENTLLALFTVASDDAATAAWQQSPERLAAGCGALLRL 180 Query: 181 LAACLLRTRPDTSPIHVQCARAWDVGRAGAELIRMALVLCADHELNASTFTSRCVASTDA 240 LAACLL T PD +PIH+QCA+AW + GA+L+RMALVLCADHELNAS FT+RCVAST A Sbjct: 181 LAACLLGTAPDKAPIHLQCAQAWALDAQGADLVRMALVLCADHELNASGFTARCVASTGA 240 Query: 241 SLRAVVIAGLAGLSGGRHGATTGRVEALWDELGTRDVDRKMRERLSRGDDLPGFGHTLYP 300 SLRA V+ GLA L+GGRHG TT RVEALWDELG ++R+RL+RG+ LPGFGH LYP Sbjct: 241 SLRAAVVGGLAALTGGRHGGTTARVEALWDELGEAQAPARLRQRLARGETLPGFGHHLYP 300 Query: 301 DGDPRASYLLSQILPRHSPWAAMIDAGITLTGQKPSVDFALVALRRHLRLPVGAAFGLFA 360 +GD RA+ LL ++LPR P AA+ + LTG PSVDFALVALRRHL+LP G+AFGLFA Sbjct: 301 EGDVRAALLL-EMLPRQGPAAALAAEVMALTGLAPSVDFALVALRRHLQLPAGSAFGLFA 359 Query: 361 LGRSIGWIAHGLEQREQHHLIRPRAVYIGPQP 392 LGR GW+A LEQR +IRPRA Y GP+P Sbjct: 360 LGRCAGWLAQALEQRATRQIIRPRAAYTGPRP 391 >ref|ZP_02168553.1| Citrate synthase [Hoeflea phototrophica DFL-43] gb|EDQ31622.1| Citrate synthase [Hoeflea phototrophica DFL-43] Length = 392 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 221/395 (55%), Positives = 277/395 (70%), Gaps = 6/395 (1%) Query: 1 MSNYLNSTEAAARLGVSRQTLYAYVSRGLLHAEPGATARESRYFAADVERVAAQRAHGRK 60 M++Y+N+ +AA RLG+SRQTLYAYVSRG++ A PG R+SRY A VE++A R GRK Sbjct: 1 MADYINAQQAAERLGISRQTLYAYVSRGMIKAVPGDDPRQSRYLTAAVEQLAETRRRGRK 60 Query: 61 PKEVAKAALNWGAPVLESSITLIDSGRLFYRGVDALSLAEHASLEEVAAGLWQCDRQTAF 120 PKE+AKA L+WG PVLES +TLI++G+ FYRG D + L+ ASLE++AA LWQ ++AF Sbjct: 61 PKEIAKATLDWGMPVLESRLTLIENGQCFYRGKDTVQLSATASLEDIAALLWQVRPESAF 120 Query: 121 GPHSAASPTVLRALFRHYGDQRAE---EVLLPLFAVASDDASTAIWQKAVERQAQGCGDL 177 P +P ++A G A E LLPLFAVA+ D T+ W+ + A+G GDL Sbjct: 121 -PRR--TPVRVKAYLELAGQAAATPAIETLLPLFAVAASDEPTSSWRTDPAQVARGSGDL 177 Query: 178 VRILAACLLRTRPDTSPIHVQCARAWDVGRAGAELIRMALVLCADHELNASTFTSRCVAS 237 VR+LAAC LR P ++P+H Q A AW V +GA+LIR ALVLCADHELNAS+FT+RC+AS Sbjct: 178 VRLLAACALRQAPLSTPVHQQLAEAWRVDASGADLIRRALVLCADHELNASSFTARCIAS 237 Query: 238 TDASLRAVVIAGLAGLSGGRHGATTGRVEALWDELGTRDVDRKMRERLSRGDDLPGFGHT 297 T ASL+AV++ LA LSG +HGATT +VE+LW+ + + +RL G LPGFGH Sbjct: 238 TGASLKAVLVGALAALSGTKHGATTTQVESLWNSTDPGAPAKSLHDRLQAGGTLPGFGHP 297 Query: 298 LYPDGDPRASYLLSQILPRHSPWAAMIDAGITLTGQKPSVDFALVALRRHLRLPVGAAFG 357 LYP GD RA LLS I P + A LTG PS+DFALVALRRHL LP GAAF Sbjct: 298 LYPKGDIRAKALLSAIGPGFPEATRLATAVEDLTGAAPSIDFALVALRRHLGLPEGAAFL 357 Query: 358 LFALGRSIGWIAHGLEQREQHHLIRPRAVYIGPQP 392 LFA+GRS+GWIAHGLEQR LIRPRA+Y G +P Sbjct: 358 LFAIGRSVGWIAHGLEQRATDQLIRPRALYTGERP 392 >ref|YP_001901115.1| excisionase family DNA binding domain-containing protein [Ralstonia pickettii 12J] gb|ACD28683.1| DNA binding domain protein, excisionase family [Ralstonia pickettii 12J] Length = 410 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 224/406 (55%), Positives = 268/406 (66%), Gaps = 6/406 (1%) Query: 1 MSNYLNSTEAAARLGVSRQTLYAYVSRGLLHAEPGATARESRYFAADVERVAAQRAHGRK 60 M+ YLN+ EAA RL VSR TLYAYVSRGLL A P R SRY ADV R+A QR+ GR+ Sbjct: 1 MTTYLNAAEAAERLHVSRPTLYAYVSRGLLSAYPSPDGRGSRYREADVARLADQRSGGRR 60 Query: 61 PKEVAKAALNWGAPVLESSITLIDSGRLFYRGVDALSLAEHASLEEVAAGLWQCDRQTAF 120 P++V + AL+WG PV+ES+ITLID GRLFYRGV AL LAE A+LE VAA LWQC+ AF Sbjct: 61 PRQVVRHALDWGLPVMESAITLIDHGRLFYRGVPALELAERATLETVAARLWQCEEGVAF 120 Query: 121 GPHSAASPTVLRALFRHYGDQRAEEVLLPLFAVASDDASTAIWQKAVERQAQGCGDLVRI 180 + P A D + + L A+A A W++ R A+ G L+R+ Sbjct: 121 KVPAPVLPKSWYAALASLEDADIRQRCMALCALALPALDEAAWRQDSARTARDAGALLRV 180 Query: 181 LAACLLRTRPDTSPIHVQCARAWDVGRAGAELIRMALVLCADHELNASTFTSRCVASTDA 240 + A +L +PDT+P+H+QC +AW++ AE IR+ALVLCADHELNAS+F +R VAST A Sbjct: 181 VFAAMLGRKPDTAPVHLQCQQAWNLDAHAAEAIRVALVLCADHELNASSFAARVVASTGA 240 Query: 241 SLRAVVIAGLAGLSGGRHGATTGRVEALWDEL-GTRDVDRKMRERLSRGDDLPGFGHTLY 299 SL AVV AGLA LSGGRHG TT RVEAL EL G R V +R RL RGD LPGFGH LY Sbjct: 241 SLGAVVSAGLAALSGGRHGGTTARVEALLSELEGKRSVATALRRRLDRGDTLPGFGHPLY 300 Query: 300 PDGDPRASYLLSQILPR----HSPWAAMIDAGITLTGQKPSVDFALVALRRHLRLPVGAA 355 DPRA +L+ LP+ ++DA LTG PSVDFALVA RR L LP G+ Sbjct: 301 RHADPRAEAILAH-LPKTGAVRKRLQTVMDAVAGLTGDGPSVDFALVATRRVLGLPAGSG 359 Query: 356 FGLFALGRSIGWIAHGLEQREQHHLIRPRAVYIGPQPEDGQAEPGR 401 FGLFA GR+ GWIAH LEQR LIRPRA Y+GP P +A GR Sbjct: 360 FGLFAAGRTAGWIAHALEQRAAGQLIRPRAAYVGPMPAALEAPAGR 405 >ref|YP_002983178.1| excisionase family DNA binding domain-containing protein [Ralstonia pickettii 12D] gb|ACS64506.1| DNA binding domain protein, excisionase family [Ralstonia pickettii 12D] Length = 410 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 218/406 (53%), Positives = 266/406 (65%), Gaps = 6/406 (1%) Query: 1 MSNYLNSTEAAARLGVSRQTLYAYVSRGLLHAEPGATARESRYFAADVERVAAQRAHGRK 60 M+ YLN+ EAA RL +SR TLYAYVSRGLL A P R SRY ADV R+A QR+ GR+ Sbjct: 1 MTTYLNAAEAAERLHISRPTLYAYVSRGLLAAYPSPDGRGSRYREADVARLADQRSGGRR 60 Query: 61 PKEVAKAALNWGAPVLESSITLIDSGRLFYRGVDALSLAEHASLEEVAAGLWQCDRQTAF 120 P++V + AL+WG PV+ES+ITLID G+LFYRG A+ LAE A+LE VAA LWQ + AF Sbjct: 61 PRQVVRHALDWGLPVMESAITLIDHGQLFYRGTPAVGLAERATLEAVAAHLWQYEEAAAF 120 Query: 121 GPHSAASPTVLRALFRHYGDQRAEEVLLPLFAVASDDASTAIWQKAVERQAQGCGDLVRI 180 + P A D + + L +A A W++ R A+ G L+R+ Sbjct: 121 NAPAPVLPKSWYAALTSLADADIRQRCMALCTLALPALDEAAWRQDSARTARDAGALLRV 180 Query: 181 LAACLLRTRPDTSPIHVQCARAWDVGRAGAELIRMALVLCADHELNASTFTSRCVASTDA 240 + A +L +PDT+P+H+QC +AW++ AE IR+ALVLCADHELNASTF +R VAST A Sbjct: 181 VFAAMLGRKPDTAPVHLQCQQAWNLDAHAAEAIRVALVLCADHELNASTFAARVVASTGA 240 Query: 241 SLRAVVIAGLAGLSGGRHGATTGRVEALWDELGT-RDVDRKMRERLSRGDDLPGFGHTLY 299 SL AVV AGLA LSGGRHG TT RVEAL EL + R V +R RL RGD LPGFGH LY Sbjct: 241 SLGAVVSAGLAALSGGRHGGTTARVEALLSELESERSVATALRRRLDRGDALPGFGHPLY 300 Query: 300 PDGDPRASYLLSQILPRHSP----WAAMIDAGITLTGQKPSVDFALVALRRHLRLPVGAA 355 DPRA +L+ LP+ ++DA LTG PSVDFALVA+RR L LP G+ Sbjct: 301 RQADPRAGAILAH-LPKTGAVRKRLQTVMDAVAGLTGDGPSVDFALVAIRRVLGLPEGSG 359 Query: 356 FGLFALGRSIGWIAHGLEQREQHHLIRPRAVYIGPQPEDGQAEPGR 401 FGLFA GR+ GWIAH LEQR LIRPRA Y+GP P +A GR Sbjct: 360 FGLFAAGRTAGWIAHALEQRAAGQLIRPRAAYVGPMPAAPEAPVGR 405 >ref|ZP_07675125.1| citrate (Si)-synthase [Ralstonia sp. 5_7_47FAA] gb|EFP66723.1| citrate (Si)-synthase [Ralstonia sp. 5_7_47FAA] Length = 410 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 216/406 (53%), Positives = 265/406 (65%), Gaps = 6/406 (1%) Query: 1 MSNYLNSTEAAARLGVSRQTLYAYVSRGLLHAEPGATARESRYFAADVERVAAQRAHGRK 60 M+ YLN+ EAA RL +SR TLYAYVSRGLL A P R SRY ADV R+A QR+ GR+ Sbjct: 1 MTTYLNAAEAAERLHISRPTLYAYVSRGLLAAYPSPDGRGSRYREADVARLADQRSGGRR 60 Query: 61 PKEVAKAALNWGAPVLESSITLIDSGRLFYRGVDALSLAEHASLEEVAAGLWQCDRQTAF 120 P++V + AL+WG PV+ES+ITLID G+LFYRG A+ LAE A+LE VAA LWQ + AF Sbjct: 61 PRQVVRHALDWGLPVMESAITLIDHGQLFYRGTPAVGLAERATLEAVAAHLWQYEEAAAF 120 Query: 121 GPHSAASPTVLRALFRHYGDQRAEEVLLPLFAVASDDASTAIWQKAVERQAQGCGDLVRI 180 + P A D + + L +A A W++ R A+ G L+R+ Sbjct: 121 NAPAPVLPKSWYAALTSLADADIRQRCMALCTLALPALDEAAWRQDSARTARDAGALLRV 180 Query: 181 LAACLLRTRPDTSPIHVQCARAWDVGRAGAELIRMALVLCADHELNASTFTSRCVASTDA 240 + A +L +PDT+P+H+QC +AW++ AE IR+ALVLCADHELNAS+F +R VAST A Sbjct: 181 VFAAMLGRKPDTAPVHLQCQQAWNLDAHAAEAIRVALVLCADHELNASSFAARVVASTGA 240 Query: 241 SLRAVVIAGLAGLSGGRHGATTGRVEALWDELGT-RDVDRKMRERLSRGDDLPGFGHTLY 299 SL AVV AGLA L+GGRHG TT RVEAL EL + R V +R RL RGD LPGFGH LY Sbjct: 241 SLGAVVSAGLAALTGGRHGGTTARVEALLSELESERSVATALRRRLDRGDALPGFGHPLY 300 Query: 300 PDGDPRASYLLSQILPRHSP----WAAMIDAGITLTGQKPSVDFALVALRRHLRLPVGAA 355 DPRA +L+ LP+ ++DA LTG PSVDFALVA RR L LP G+ Sbjct: 301 RQADPRAGAILAH-LPKTGAVRKRLQTVMDAVAGLTGDGPSVDFALVATRRVLGLPEGSG 359 Query: 356 FGLFALGRSIGWIAHGLEQREQHHLIRPRAVYIGPQPEDGQAEPGR 401 FGLFA GR+ GWIAH LEQR LIRPRA Y+GP P +A GR Sbjct: 360 FGLFAAGRTAGWIAHALEQRAAGQLIRPRAAYVGPMPAAPEAPVGR 405