BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0234.p (554 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774720.1| hypothetical protein Hsero_1296 [Herbaspiril... 1083 0.0 ref|YP_002872714.1| hypothetical protein PFLU3139 [Pseudomonas f... 556 e-156 ref|YP_001353392.1| hypothetical protein mma_1702 [Janthinobacte... 551 e-154 ref|YP_004354133.1| hypothetical protein PSEBR_a2829 [Pseudomona... 550 e-154 ref|YP_001172615.1| hypothetical protein PST_2108 [Pseudomonas s... 545 e-153 gb|AEA84028.1| conserved hypothetical protein [Pseudomonas stutz... 540 e-151 ref|ZP_07775479.1| hypothetical protein PFWH6_2886 [Pseudomonas ... 538 e-151 ref|YP_004714368.1| hypothetical protein PSTAB_1998 [Pseudomonas... 538 e-151 ref|ZP_03270203.1| VRR-NUC domain protein [Burkholderia sp. H160... 538 e-150 ref|YP_003607522.1| VRR-NUC domain protein [Burkholderia sp. CCG... 532 e-149 >ref|YP_003774720.1| hypothetical protein Hsero_1296 [Herbaspirillum seropedicae SmR1] gb|ADJ62812.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 551 Score = 1083 bits (2802), Expect = 0.0, Method: Compositional matrix adjust. Identities = 541/554 (97%), Positives = 543/554 (98%), Gaps = 3/554 (0%) Query: 1 VPSARPFYYLDNFQQVLDWLAQRCADLLDLRERQFIAAFPGLPLPSRALLVRMMMRKGEL 60 +PSARPFYYLDNFQQVLDWLAQRCADLLDLRERQFI AFPGLPLPSRAL VRMMMRKGEL Sbjct: 1 MPSARPFYYLDNFQQVLDWLAQRCADLLDLRERQFIVAFPGLPLPSRALFVRMMMRKGEL 60 Query: 61 FRTGRLDYPEIGCPLEAAKGLPEDWVERDAALTLEQFFSLSTKPELVRAFALTGAQRAAR 120 FR+GRLDYPEIGCPLEAAKGLPEDWVERDAALTLEQFFSLSTKPELVRAFALTGAQRAAR Sbjct: 61 FRSGRLDYPEIGCPLEAAKGLPEDWVERDAALTLEQFFSLSTKPELVRAFALTGAQRAAR 120 Query: 121 KADLLAQLAADPAWDQARVLRQWCRQGDELALRLRVQDLCDRLRLMFFGNLRQDWSEFVL 180 K DLLAQLAADPAWDQARVLRQWCRQGDELALRLRVQDLCDRLRLMFFGNLRQDWSEFVL Sbjct: 121 KTDLLAQLAADPAWDQARVLRQWCRQGDELALRLRVQDLCDRLRLMFFGNLRQDWSEFVL 180 Query: 181 ADLGLFRYERVALSPEARGFRQRSDVDHYLRLHACSEALEAGEDAADVMAALTVAAPAGG 240 ADLG FRYERVALSPEARGFRQRSDVDHYLRLHACSEALEAGEDAADVMAALTVAAPA G Sbjct: 181 ADLGRFRYERVALSPEARGFRQRSDVDHYLRLHACSEALEAGEDAADVMAALTVAAPAEG 240 Query: 241 HDNPWLQSRYERLLFKLGQHLEKQGHWPQAHAVYARCPYPGARGRAMRVLEKQGRYAQAY 300 HDNPWLQSRYERLLFKLGQHLEKQGHWPQAHAVYARCPYPGARGRAMRVLEKQGRYAQAY Sbjct: 241 HDNPWLQSRYERLLFKLGQHLEKQGHWPQAHAVYARCPYPGARGRAMRVLEKQGRYAQAY 300 Query: 301 ALFQAAQAAPESEAERQHLQRIGPRLTRQLGYPPMVRVRTLPPQRLDLVLAMQAGQGGQG 360 ALFQAAQAAPESEAERQHLQRIGPRLTRQLGYPPMVRVRTLPPQRLDLVLAMQA GQG Sbjct: 301 ALFQAAQAAPESEAERQHLQRIGPRLTRQLGYPPMVRVRTLPPQRLDLVLAMQA---GQG 357 Query: 361 VEAAVRAHLQAPDAPVFYVENTLATALFGLLCWDAIFAAIPGAFFHPFQREPADLHSADF 420 VEAAVRAHLQAPDAPVFYVENTLATALFGLLCWDAIFAAIPGAFFHPFQREPADLHSADF Sbjct: 358 VEAAVRAHLQAPDAPVFYVENTLATALFGLLCWDAIFAAIPGAFFHPFQREPADLHSADF 417 Query: 421 HARRREAFAHCLARLDQERHREAILATYEDKQGVLSPFVSWGAISRELLVLALDCIPAWH 480 HARRREAFAHCLARLDQERHREAILA YEDKQGVLSPFVSWGAISR LLVLALDCIPAWH Sbjct: 418 HARRREAFAHCLARLDQERHREAILAAYEDKQGVLSPFVSWGAISRGLLVLALDCIPAWH 477 Query: 481 LKHWCLRILEDVRENRSGFPDLIQFWPQQRRYRMIEVKGPGDRLQDNQQRWLAFCAQHQM 540 LKHWCLRILEDVRENRSGFPDLIQFWPQQRRYRMIEVKGPGDRLQDNQQRWLAFCAQHQM Sbjct: 478 LKHWCLRILEDVRENRSGFPDLIQFWPQQRRYRMIEVKGPGDRLQDNQQRWLAFCAQHQM 537 Query: 541 PVAVCYLQWQQQAA 554 PVAVCYLQWQQQ A Sbjct: 538 PVAVCYLQWQQQVA 551 >ref|YP_002872714.1| hypothetical protein PFLU3139 [Pseudomonas fluorescens SBW25] emb|CAY49367.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 548 Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust. Identities = 294/553 (53%), Positives = 355/553 (64%), Gaps = 9/553 (1%) Query: 2 PSARPFYYLDNFQQVLDWLAQRCADLLDLRERQFIAAFPGLPLPSRALLVRMMMRKGELF 61 P P YYL NF+QVL WL QR ADLLD E FI F LP S+ALLVRM+MRKG F Sbjct: 4 PLEEPLYYLHNFRQVLHWLGQRYADLLDPDEEHFIQQFDRLPQASQALLVRMVMRKGVHF 63 Query: 62 RTGRLDYPEIGCPLEAAKGLPE-DWVERDAALTLEQFFSLSTKPELVRAFALTGAQRAAR 120 R G+L+Y EIGC AA L E WV+ + L + F+L K E++ AF Q A+ Sbjct: 64 RAGKLNYVEIGCTQAAAGPLLELGWVDDECLLAFDALFALLQKGEILAAFKPWIEQPKAK 123 Query: 121 KADLLAQLAADPAWDQARVLRQWCRQGDELALRLRVQDLCDRLRLMFFGNLRQDWSEFVL 180 K D L L+A + R WC + L V DLCDRLRLMFFGNL QDWSEFVL Sbjct: 124 KTDWLEGLSAH--FTDNRCFAHWCPDLADTLYSLTVMDLCDRLRLMFFGNLHQDWSEFVL 181 Query: 181 ADLGLFRYERVALSPEARGFRQRSDVDHYLRLHACSEALEAGEDAADVMAALTVAAPAGG 240 ADLG++ YE+V E+RG R R DV +L LH C +A E G +V+A + Sbjct: 182 ADLGIYTYEKVEFCAESRGLRSRDDVQGFLFLHQCQQAFETGAALEEVLAQVATL----N 237 Query: 241 HDNPWLQSRYERLLFKLGQHLEKQGHWPQAHAVYARCPYPGARGRAMRVLEKQGRYAQAY 300 DNPWL+ R +LLF++GQ+ E+ A +Y C YPGAR R +RVLE+Q Y QA Sbjct: 238 TDNPWLEKRRAKLLFQVGQYCERTAELALAEQIYRACAYPGARSRLIRVLERQEHYVQAM 297 Query: 301 ALFQAAQAAPESEAERQHLQRIGPRLTRQLGYPPMVRVRTLPPQRLDLVLAMQAGQGGQG 360 AL AAQ APES AE+QHL R+ PRL R+LG P + +V+ P RLDL LA+ Sbjct: 298 ALANAAQQAPESAAEQQHLLRVVPRLRRKLGEPALPKVKPRPVTRLDLALALP--DPLMS 355 Query: 361 VEAAVRAHLQAPDAPVFYVENTLATALFGLLCWDAIFAAIPGAFFHPFQREPADLHSADF 420 VE V+AHL PD PV YVEN L +LFGLLCWD IFA +PG+FFHPFQR PADLHS DF Sbjct: 356 VEYCVQAHLSEPDGPVHYVENGLINSLFGLLCWDVIFAPLPGSFFHPFQRGPADLHSEDF 415 Query: 421 HARRREAFAHCLARLDQERHREAILATYEDKQGVLSPFVSWGAISRELLVLALDCIPAWH 480 H RR FA C +L ER++ I Y +K G+ SPFV W +S ELL AL C+PA H Sbjct: 416 HLRRAPLFAACFEQLQDERYKTTIRQRYSEKWGIQSPFVFWNLLSAELLEQALACLPAEH 475 Query: 481 LKHWCLRILEDVRENRSGFPDLIQFWPQQRRYRMIEVKGPGDRLQDNQQRWLAFCAQHQM 540 L++W R+L D+R NR+G PDLIQFWP Q+ YRMIEVKGPGDRLQDNQ RWL FC ++QM Sbjct: 476 LRYWFERLLLDIRANRAGMPDLIQFWPAQKTYRMIEVKGPGDRLQDNQLRWLEFCGEYQM 535 Query: 541 PVAVCYLQWQQQA 553 PV VCY++W A Sbjct: 536 PVTVCYVRWAASA 548 >ref|YP_001353392.1| hypothetical protein mma_1702 [Janthinobacterium sp. Marseille] gb|ABR91012.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 551 Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust. Identities = 290/550 (52%), Positives = 367/550 (66%), Gaps = 9/550 (1%) Query: 6 PFYYLDNFQQVLDWLAQRCADLLDLRERQFIAAFPGLPLPSRALLVRMMMRKGELFRTGR 65 PFYYL+NFQ+VLDW+ QR +DLL ER FI FP LP SRALLVRM+MRKGE+FR+G+ Sbjct: 10 PFYYLENFQRVLDWIGQRYSDLLSDEERSFIEQFPRLPQSSRALLVRMVMRKGEVFRSGK 69 Query: 66 LDYPEIGCPLEAAKGLPE-DWVERDAALTLEQFFSLSTKPELVRAFALTGAQRAARKADL 124 L Y EI CP AA+ L E DW+ + L++ Q F+L K ELV+AF ++ A AARK DL Sbjct: 70 LAYAEIACPDAAARPLLELDWLRHNPPLSVAQLFALLRKAELVQAFRISAAGSAARKGDL 129 Query: 125 LAQLAADPAWDQARVLRQWCRQGDELALRLRVQDLCDRLRLMFFGNLRQDWSEFVLADLG 184 +L A+ +AR L QW E + V +C+RLRLMFFGNL QDWSEFVL+DLG Sbjct: 130 QEKLQH--AFPEARTLEQWAPDITESIYEVHVTAICERLRLMFFGNLYQDWSEFVLSDLG 187 Query: 185 LFRYERVALSPEARGFRQRSDVDHYLRLHACSEALEAGEDAADVMAALTVAAPAGGHDNP 244 ++RYE+V S +RGFR R D+D YL L C E + G +++ + P + NP Sbjct: 188 IYRYEQVEFSESSRGFRSRQDIDDYLHLQRCRERFDDGNYLDEIVPDI----PTTPYANP 243 Query: 245 WLQSRYERLLFKLGQHLEKQGHWPQAHAVYARCPYPGARGRAMRVLEKQGRYAQAYALFQ 304 W++ R +LLF+ Q E+ A +Y +C Y GAR R +RVLEK +A L + Sbjct: 244 WMEGRRNKLLFRFAQEYERCQELDSALKLYRQCSYAGARSRTIRVLEKNDAVGEALELAE 303 Query: 305 AAQAAPESEAERQHLQRIGPRLTRQLGYPPMVRVRTLPPQRLDLVLAMQAGQGGQGVEAA 364 AA + PESEAE Q + R+ PRL R+LG+ + + + DL L A VE Sbjct: 304 AALSRPESEAEHQAVLRMLPRLRRKLGHAKLAPGKAPVIEAEDLSLPYPAT--ALSVEQM 361 Query: 365 VRAHLQAPDAPVFYVENTLATALFGLLCWDAIFAAIPGAFFHPFQREPADLHSADFHARR 424 V+AHL +APVFYVENTL +LFGLLCW AIFAA+PGAFFHPF + P DLHSADF +R Sbjct: 362 VQAHLSRCEAPVFYVENTLINSLFGLLCWPAIFAALPGAFFHPFHQGPVDLHSADFVQKR 421 Query: 425 REAFAHCLARLDQERHREAILATYEDKQGVLSPFVSWGAISRELLVLALDCIPAWHLKHW 484 ++ F CLARLD + +R+ I+ T+ K G+ SPFV WG I LL LAL CIPA HLK + Sbjct: 422 QDIFNQCLARLDDDSYRQTIVDTFAAKAGIQSPFVFWGTIDEVLLKLALHCIPAAHLKKY 481 Query: 485 CLRILEDVRENRSGFPDLIQFWPQQRRYRMIEVKGPGDRLQDNQQRWLAFCAQHQMPVAV 544 RIL D+ NRSG PDLIQFWPQ++RYRM+EVKGPGDRLQDNQ RW+ +C +HQMPVAV Sbjct: 482 FARILRDIPANRSGLPDLIQFWPQEQRYRMLEVKGPGDRLQDNQIRWINYCIEHQMPVAV 541 Query: 545 CYLQWQQQAA 554 Y+QW +QAA Sbjct: 542 TYVQWTEQAA 551 >ref|YP_004354133.1| hypothetical protein PSEBR_a2829 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA69129.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 576 Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust. Identities = 295/549 (53%), Positives = 361/549 (65%), Gaps = 9/549 (1%) Query: 6 PFYYLDNFQQVLDWLAQRCADLLDLRERQFIAAFPGLPLPSRALLVRMMMRKGELFRTGR 65 PFYYL+NFQQVL WL QR AD+L E++FI F LP ++ LLVRM+MRKG FR + Sbjct: 9 PFYYLNNFQQVLAWLTQRYADVLSTDEQRFIEHFAALPRGAQGLLVRMVMRKGLRFRHSK 68 Query: 66 LDYPEIG-CPLEAAKGLPEDWVERDAALTLEQFFSLSTKPELVRAFALTGAQRAARKADL 124 L YPEIG A L WVE++A + L + F + KPE++ Q A+K + Sbjct: 69 LHYPEIGDIGAAVAPLLALGWVEKEAPIGLAELFEVLLKPEILLCLGHLIEQPKAKKTEW 128 Query: 125 LAQLAADPAWDQARVLRQWCRQGDELALRLRVQDLCDRLRLMFFGNLRQDWSEFVLADLG 184 L L D +Q++ R WC Q D+ L + +LCDRLRLMFFGNL QDWSEFVL+DLG Sbjct: 129 LQAL--DERLNQSQPFRAWCPQLDDRLYSLTIMNLCDRLRLMFFGNLYQDWSEFVLSDLG 186 Query: 185 LFRYERVALSPEARGFRQRSDVDHYLRLHACSEALEAGEDAADVMAALTVAAPAGGHDNP 244 +F YE V S E+RG R R DVD L LH C + EAGE +++A + + DNP Sbjct: 187 IFTYETVEFSAESRGLRSREDVDACLFLHDCQQRFEAGESLEEIVAQVNELS----LDNP 242 Query: 245 WLQSRYERLLFKLGQHLEKQGHWPQAHAVYARCPYPGARGRAMRVLEKQGRYAQAYALFQ 304 WL+ R +LLF++GQH E+ G + A +Y C YPGAR R +RVLE+ G YA A L + Sbjct: 243 WLERRRGKLLFQIGQHGERIGDFALALGIYRDCAYPGARLRMVRVLERIGEYALALELGE 302 Query: 305 AAQAAPESEAERQHLQRIGPRLTRQLGYPPMVRVRTLPPQRLDLVLAMQAGQGGQGVEAA 364 A AP+S AE Q L RI PRL R+LG PP+ R +RL+L L VE Sbjct: 303 VAMQAPQSAAETQALLRIVPRLRRKLGGPPVPRSLAREVERLELQLPRV--DPTLSVEYH 360 Query: 365 VRAHLQAPDAPVFYVENTLATALFGLLCWDAIFAAIPGAFFHPFQREPADLHSADFHARR 424 V+AHL APV YVEN+L +LFGLLCW AIFA +PGAFFHPFQR P DL + DFHARR Sbjct: 361 VQAHLHDETAPVHYVENSLINSLFGLLCWPAIFAPLPGAFFHPFQRGPVDLLNEDFHARR 420 Query: 425 REAFAHCLARLDQERHREAILATYEDKQGVLSPFVSWGAISRELLVLALDCIPAWHLKHW 484 E FA CLA LD R+R+ I Y +K+GV SPFV WGA+S LL ALDC+PA HLKHW Sbjct: 421 AELFAACLAELDDGRYRQTIGRRYAEKRGVQSPFVFWGALSEPLLEQALDCLPAAHLKHW 480 Query: 485 CLRILEDVRENRSGFPDLIQFWPQQRRYRMIEVKGPGDRLQDNQQRWLAFCAQHQMPVAV 544 R+L D++ NR+G PDLIQFWPQ + YRMIEVKGPGDRLQDNQ RWL FC +HQMPVAV Sbjct: 481 FDRLLLDIKANRAGMPDLIQFWPQHKTYRMIEVKGPGDRLQDNQLRWLEFCHEHQMPVAV 540 Query: 545 CYLQWQQQA 553 CY+QW + A Sbjct: 541 CYVQWAESA 549 >ref|YP_001172615.1| hypothetical protein PST_2108 [Pseudomonas stutzeri A1501] gb|ABP79773.1| conserved hypothetical protein [Pseudomonas stutzeri A1501] Length = 545 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 300/551 (54%), Positives = 373/551 (67%), Gaps = 13/551 (2%) Query: 5 RPFYYLDNFQQVLDWLAQRCADLLDLRERQFIAAFPGLPLPSRALLVRMMMRKGELFRTG 64 PFYYLDNFQQVL W+ Q DLLD ER FI F LP PS+ALLVRM+MRKG LFR Sbjct: 7 NPFYYLDNFQQVLAWVDQHHGDLLDDAERAFIERFALLPQPSQALLVRMVMRKGALFRAS 66 Query: 65 RLDYPEIGCPLEAAKGLPED-WVERDAALTLEQFFSLSTKPELVRAFALTGAQRAARKAD 123 +L Y EIGCP AA L E W++ + LTLEQ F L TK EL++ F +T + RKA+ Sbjct: 67 KLHYEEIGCPRRAAAPLIEQGWIDSERELTLEQLFGLLTKGELLQLFGVTNSA-GLRKAE 125 Query: 124 LLAQLAADPAWDQARVLRQWCRQGDELALRLRVQDLCDRLRLMFFGNLRQDWSEFVLADL 183 L +L AD D A+ QW ++ L + +LC+RLRL+FFGN+ QDWSEFVLADL Sbjct: 126 LFERLRADH--DLAKPFGQWWAGSEDAVYSLCIDELCERLRLLFFGNIHQDWSEFVLADL 183 Query: 184 GLFRYERVALSPEARGFRQRSDVDHYLRLHACSEALEAGEDAADVMAALTVAAPAGGHDN 243 G++RYE+V+ SP +R F R+++D YL LH C E +AGE A+++AA+ PA N Sbjct: 184 GVYRYEQVSFSPASRAFSSRAELDAYLHLHRCRERFDAGEPLAEILAAV----PAAPFGN 239 Query: 244 PWLQSRYERLLFKLGQHLEKQGHWPQAHAVYARCPYPGARGRAMRVLEKQGRYAQAYALF 303 WL+SR +LL ++GQ E+ G +A V+A YPGAR RA+RVLE+ G+ A A L Sbjct: 240 AWLESRRGKLLLRIGQQFERLGELDEALRVHASNSYPGARERAIRVLERGGQPAAALDLL 299 Query: 304 QAAQAAPESEAERQHLQRIGPRLTRQLGYPPMVRVRTLPPQRLDLVLAMQAGQGGQGVEA 363 A+AAPESE E Q LQRI PRL R LG P R R+ P++LDLVL VE Sbjct: 300 LQARAAPESEHEVQQLQRILPRLQRSLGIP-TERARSRKPEQLDLVLPRPTC----SVEQ 354 Query: 364 AVRAHLQAPDAPVFYVENTLATALFGLLCWDAIFAAIPGAFFHPFQREPADLHSADFHAR 423 AVR HL PDAPV+YVEN L +LFGLLCWDAIFA +PGAFFHPF PADL+ ADFH R Sbjct: 355 AVREHLTRPDAPVYYVENALVGSLFGLLCWDAIFAPLPGAFFHPFHWAPADLNRADFHQR 414 Query: 424 RREAFAHCLARLDQERHREAILATYEDKQGVLSPFVSWGAISRELLVLALDCIPAWHLKH 483 R + FA CLA LD + +R+ I T++ K G+ + FV+WG + +LL ALDCIPA HLK Sbjct: 415 RADLFAACLACLDSDDYRDCIWRTFQAKLGIHNAFVAWGLLDEQLLAQALDCIPAAHLKL 474 Query: 484 WCLRILEDVRENRSGFPDLIQFWPQQRRYRMIEVKGPGDRLQDNQQRWLAFCAQHQMPVA 543 RIL DV NR+G PDLIQ WP+ RRYRMIEVKGPGDRLQDNQ+RW+ + QH +P+A Sbjct: 475 LFQRILADVTGNRTGLPDLIQLWPEARRYRMIEVKGPGDRLQDNQKRWIDYAHQHGLPIA 534 Query: 544 VCYLQWQQQAA 554 VC++QW + A Sbjct: 535 VCHVQWAEAMA 545 >gb|AEA84028.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 545 Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust. Identities = 298/551 (54%), Positives = 369/551 (66%), Gaps = 13/551 (2%) Query: 5 RPFYYLDNFQQVLDWLAQRCADLLDLRERQFIAAFPGLPLPSRALLVRMMMRKGELFRTG 64 PFYYLDNFQQVL W+ Q DLLD ER FI F LP S+ALLVRM+MRKG LFR Sbjct: 7 NPFYYLDNFQQVLAWVDQHHGDLLDDAERAFIGRFALLPQASQALLVRMVMRKGALFRAS 66 Query: 65 RLDYPEIGCPLEAAKGLPED-WVERDAALTLEQFFSLSTKPELVRAFALTGAQRAARKAD 123 +L Y EIGCP AA L E W++ + LTLEQ F L TK EL++ F T + RKA+ Sbjct: 67 KLHYGEIGCPRRAAAPLIEQGWIDAERELTLEQLFGLLTKGELLQLFGATNSA-GLRKAE 125 Query: 124 LLAQLAADPAWDQARVLRQWCRQGDELALRLRVQDLCDRLRLMFFGNLRQDWSEFVLADL 183 L +L AD D A+ QW ++ L + +LC+RLRL+FFGN+ QDWSEFVLADL Sbjct: 126 LFERLRADH--DLAKPFGQWWAGSEDAVYSLCIDELCERLRLLFFGNIHQDWSEFVLADL 183 Query: 184 GLFRYERVALSPEARGFRQRSDVDHYLRLHACSEALEAGEDAADVMAALTVAAPAGGHDN 243 G++RYE+V+ SP +R F R+++D YL LH C E +AGE A+++AA+ PA N Sbjct: 184 GVYRYEQVSFSPASRAFSSRAELDAYLHLHRCRERFDAGEPLAEILAAV----PAAPFGN 239 Query: 244 PWLQSRYERLLFKLGQHLEKQGHWPQAHAVYARCPYPGARGRAMRVLEKQGRYAQAYALF 303 WL+SR +LL ++GQ E+ G A V+A YPGAR RA+RVLE+ G+ A A L Sbjct: 240 AWLESRRGKLLLRIGQQFERLGQLDDALRVHASNGYPGARERAIRVLERGGQPAAALDLL 299 Query: 304 QAAQAAPESEAERQHLQRIGPRLTRQLGYPPMVRVRTLPPQRLDLVLAMQAGQGGQGVEA 363 A+A PESE E Q LQRI PRL R LG P R R+ P++LDLVL VE Sbjct: 300 LQARATPESEHEVQQLQRILPRLQRSLGIP-TERARSRKPEQLDLVLPRPTC----SVEQ 354 Query: 364 AVRAHLQAPDAPVFYVENTLATALFGLLCWDAIFAAIPGAFFHPFQREPADLHSADFHAR 423 AVR HL PDAPV+YVEN L +LFGLLCWDAIFA +PGAFFHPF PADL+ ADFH R Sbjct: 355 AVREHLTRPDAPVYYVENALVGSLFGLLCWDAIFAPLPGAFFHPFHWAPADLNRADFHQR 414 Query: 424 RREAFAHCLARLDQERHREAILATYEDKQGVLSPFVSWGAISRELLVLALDCIPAWHLKH 483 R + FA CLA LD + +R+ I T++ K G+ + FV+WG + +LL ALDCIPA HLK Sbjct: 415 RADLFAACLACLDSDDYRDCIWRTFQAKLGIHNAFVTWGLLDEQLLAQALDCIPAAHLKL 474 Query: 484 WCLRILEDVRENRSGFPDLIQFWPQQRRYRMIEVKGPGDRLQDNQQRWLAFCAQHQMPVA 543 RIL DV NR+G PDLIQ WP+ RRYRMIEVKGPGDRLQDNQ+RW+ + QH +P+A Sbjct: 475 LFQRILADVTGNRTGLPDLIQLWPEARRYRMIEVKGPGDRLQDNQKRWIDYAHQHGLPIA 534 Query: 544 VCYLQWQQQAA 554 VC++QW + A Sbjct: 535 VCHVQWAEAMA 545 >ref|ZP_07775479.1| hypothetical protein PFWH6_2886 [Pseudomonas fluorescens WH6] gb|EFQ63208.1| hypothetical protein PFWH6_2886 [Pseudomonas fluorescens WH6] Length = 549 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 293/554 (52%), Positives = 356/554 (64%), Gaps = 9/554 (1%) Query: 2 PSARPFYYLDNFQQVLDWLAQRCADLLDLRERQFIAAFPGLPLPSRALLVRMMMRKGELF 61 P P YYL NF+QVL WL +R ADLLD E+ FI F LP S+ALLVRM+MRKG F Sbjct: 4 PLEDPLYYLHNFRQVLHWLGERYADLLDPDEQHFIQQFDRLPQASQALLVRMVMRKGVHF 63 Query: 62 RTGRLDYPEIGCP-LEAAKGLPEDWVERDAALTLEQFFSLSTKPELVRAFALTGAQRAAR 120 R G+L+Y EIGC AA L WV+ L + + F+L K E++ AFA Q AR Sbjct: 64 RAGKLNYVEIGCTHAAAAPLLALGWVDDQPLLDVAELFALLQKAEILSAFAPWIDQPRAR 123 Query: 121 KADLLAQLAADPAWDQARVLRQWCRQGDELALRLRVQDLCDRLRLMFFGNLRQDWSEFVL 180 K D L L+ + R WC + L V +LC+RLRLMFFGNL QDWSEFVL Sbjct: 124 KVDWLEGLSLQ--FTDRRRFAHWCPGLADTLYSLTVMELCERLRLMFFGNLHQDWSEFVL 181 Query: 181 ADLGLFRYERVALSPEARGFRQRSDVDHYLRLHACSEALEAGEDAADVMAALTVAAPAGG 240 ADLG++ YE+V E+RG R R DV YL L C A E+G +V+A + G Sbjct: 182 ADLGIYTYEKVQFCAESRGLRSRDDVHGYLFLQQCQRAFESGTALEEVLADIATL----G 237 Query: 241 HDNPWLQSRYERLLFKLGQHLEKQGHWPQAHAVYARCPYPGARGRAMRVLEKQGRYAQAY 300 DNPWL+ R +LLF++GQ E+ A +Y C YPGAR R +RVLE+Q Y QA Sbjct: 238 TDNPWLEKRRAKLLFQIGQSCERSAELALAQQIYRTCAYPGARSRLIRVLERQADYVQAM 297 Query: 301 ALFQAAQAAPESEAERQHLQRIGPRLTRQLGYPPMVRVRTLPPQRLDLVLAMQAGQGGQG 360 AL AAQ APES AE QHL R+ PRL R+LG P + R + RLDL LA+ + Sbjct: 298 ALASAAQQAPESAAEHQHLLRVIPRLQRKLGGPAVPRSKPREVTRLDLELAL--PEPLMS 355 Query: 361 VEAAVRAHLQAPDAPVFYVENTLATALFGLLCWDAIFAAIPGAFFHPFQREPADLHSADF 420 VE V+AHL PDAPV YVEN L +LFGLLCWD IFA +PG+FFHPFQR PADLHS DF Sbjct: 356 VEYCVQAHLSEPDAPVHYVENGLINSLFGLLCWDVIFAPLPGSFFHPFQRGPADLHSEDF 415 Query: 421 HARRREAFAHCLARLDQERHREAILATYEDKQGVLSPFVSWGAISRELLVLALDCIPAWH 480 RR FA C +L +R++ +I Y +K G+ SPFV W +S ELL AL+C+PA H Sbjct: 416 QHRRAPLFAACFEQLCDDRYKTSIRRRYTEKWGIQSPFVFWNLLSEELLEQALECLPAAH 475 Query: 481 LKHWCLRILEDVRENRSGFPDLIQFWPQQRRYRMIEVKGPGDRLQDNQQRWLAFCAQHQM 540 L+ W R+L D+R NR+G PDLIQFWP Q+ YRMIEVKGPGDRLQDNQ RWL FCAQ+QM Sbjct: 476 LRCWFERLLLDIRANRAGMPDLIQFWPAQKTYRMIEVKGPGDRLQDNQLRWLEFCAQYQM 535 Query: 541 PVAVCYLQWQQQAA 554 PV VCY++W +Q A Sbjct: 536 PVTVCYVRWAEQPA 549 >ref|YP_004714368.1| hypothetical protein PSTAB_1998 [Pseudomonas stutzeri ATCC 17588 = LMG 11199] gb|AEJ05279.1| hypothetical protein PSTAB_1998 [Pseudomonas stutzeri ATCC 17588 = LMG 11199] Length = 545 Score = 538 bits (1386), Expect = e-151, Method: Compositional matrix adjust. Identities = 298/549 (54%), Positives = 370/549 (67%), Gaps = 13/549 (2%) Query: 7 FYYLDNFQQVLDWLAQRCADLLDLRERQFIAAFPGLPLPSRALLVRMMMRKGELFRTGRL 66 FYYLDNFQQVL W+ Q DLLD ER FI F LP S+ALLVRM+MRKG LFR +L Sbjct: 9 FYYLDNFQQVLAWVDQHHGDLLDDAERAFIGRFALLPQASQALLVRMVMRKGALFRASKL 68 Query: 67 DYPEIGCPLEAAKGLPED-WVERDAALTLEQFFSLSTKPELVRAFALTGAQRAARKADLL 125 Y EIGCP AA L E W++ + LTLEQ F L TK EL++ F +T + RKA+L Sbjct: 69 HYGEIGCPRRAAAPLIEQGWIDAERELTLEQLFGLLTKGELLQLFGVTNSA-GLRKAELF 127 Query: 126 AQLAADPAWDQARVLRQWCRQGDELALRLRVQDLCDRLRLMFFGNLRQDWSEFVLADLGL 185 +L AD D A+ QW ++ L + +LC+RLRL+FFGN+ QDWSEFVLADLG+ Sbjct: 128 ERLRADH--DLAKPFGQWWAGSEDAVYSLCIDELCERLRLLFFGNIHQDWSEFVLADLGV 185 Query: 186 FRYERVALSPEARGFRQRSDVDHYLRLHACSEALEAGEDAADVMAALTVAAPAGGHDNPW 245 +RYE+V+ SP +R F R+++D YL LH C E +AGE A+++AA+ PA N W Sbjct: 186 YRYEQVSFSPASRAFSSRAELDAYLHLHRCRERFDAGEPLAEILAAV----PAAPFGNAW 241 Query: 246 LQSRYERLLFKLGQHLEKQGHWPQAHAVYARCPYPGARGRAMRVLEKQGRYAQAYALFQA 305 L+SR +LL ++GQ E+ G A V+A YPGAR RA+RVLE+ G+ A A L Sbjct: 242 LESRRGKLLLRIGQQFERLGQLDDALRVHASNGYPGARERAIRVLERGGQPAAALDLLLQ 301 Query: 306 AQAAPESEAERQHLQRIGPRLTRQLGYPPMVRVRTLPPQRLDLVLAMQAGQGGQGVEAAV 365 A+AAPESE E Q LQRI PRL R LG P R R+ P++LDLVL VE AV Sbjct: 302 ARAAPESEHEVQQLQRILPRLQRSLGIP-TERARSRKPEQLDLVLPRPTC----SVEQAV 356 Query: 366 RAHLQAPDAPVFYVENTLATALFGLLCWDAIFAAIPGAFFHPFQREPADLHSADFHARRR 425 R HL PDAPV+YVEN L +LFGLLCWDAIFA +PGAFFHPF PADL+ ADFH RR Sbjct: 357 REHLTRPDAPVYYVENALVGSLFGLLCWDAIFAPLPGAFFHPFHWAPADLNRADFHQRRA 416 Query: 426 EAFAHCLARLDQERHREAILATYEDKQGVLSPFVSWGAISRELLVLALDCIPAWHLKHWC 485 + FA CLA LD + +R+ I T++ K G+ + FV+WG + +LL ALDCIPA HLK Sbjct: 417 DLFAACLACLDSDDYRDCIWRTFQAKLGIHNAFVTWGLLDEQLLAQALDCIPAAHLKLLF 476 Query: 486 LRILEDVRENRSGFPDLIQFWPQQRRYRMIEVKGPGDRLQDNQQRWLAFCAQHQMPVAVC 545 RIL DV NR+G PDLIQ WP+ RRYRMIEVKGPGDRLQDNQ+RW+ + QH +P+AVC Sbjct: 477 QRILADVTGNRTGLPDLIQLWPEARRYRMIEVKGPGDRLQDNQKRWIDYAHQHGLPIAVC 536 Query: 546 YLQWQQQAA 554 ++QW + A Sbjct: 537 HVQWAEAMA 545 >ref|ZP_03270203.1| VRR-NUC domain protein [Burkholderia sp. H160] gb|EDZ98210.1| VRR-NUC domain protein [Burkholderia sp. H160] Length = 589 Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust. Identities = 296/562 (52%), Positives = 365/562 (64%), Gaps = 18/562 (3%) Query: 8 YYLDNFQQVLDWLAQRCADLLDLRERQFIAAFPGLPLPSRALLVRMMMRKGELFRTGRLD 67 YYL NF++ L WLA R DLLD E F+ F LP SRALLVRM+MRKG LFR RL Sbjct: 15 YYLLNFERALAWLAARYDDLLDDEEHAFLKNFAELPQASRALLVRMLMRKGSLFRASRLV 74 Query: 68 YPEIGCPLEAAKGLP-EDWVERDAALTLEQFFSLSTKPELVRAFA-----LTGAQRAARK 121 Y EIGCPL+AA + W++ + L+L+ F+LST+ +L+ FA + GA +A RK Sbjct: 75 YDEIGCPLQAAMPMALHGWIDTEPPLSLDDLFALSTRAQLLDIFADAIARIPGA-KALRK 133 Query: 122 ADLLAQLAA-------DPAWDQARVLRQWCRQGDELALRLRVQDLCDRLRLMFFGNLRQD 174 DLL L A D +R L W + L + + LCDRLRLMFFGNL QD Sbjct: 134 PDLLETLRALCETESNDAPAGISRPLAAWHHATTDRVLHVAIAPLCDRLRLMFFGNLHQD 193 Query: 175 WSEFVLADLGLFRYERVALSPEARGFRQRSDVDHYLRLHACSEALE--AGEDAADVMAAL 232 WSEFVLADLG+F+YE+VA P +R F+QR+D+D YL LHAC EALE ++ A + L Sbjct: 194 WSEFVLADLGVFQYEKVAFGPSSRAFQQRADIDVYLALHACREALEWLPVDNDASALDEL 253 Query: 233 TVAAPAGGHDNPWLQSRYERLLFKLGQHLEKQGHWPQAHAVYARCPYPGARGRAMRVLEK 292 + NPWL++R +LLF++GQ E++ W A AVY C +PGAR R MRVLE+ Sbjct: 254 IATVHSIEIANPWLETRRAKLLFRIGQDCERREQWGTALAVYDACAWPGARHRCMRVLER 313 Query: 293 QGRYAQAYALFQAAQAAPESEAERQHLQRIGPRLTRQLGYPPMVRVRTLPPQRLDLVLAM 352 GR+ +A AL A AAPESE E Q + R+ PRL R+ G P P +R LVL Sbjct: 314 NGRFGEALALASQADAAPESEEEAQRVARMLPRLRRKCGEPVPRAPAARPVERGTLVLPK 373 Query: 353 QAGQGGQGVEAAVRAHLQAPDAPVFYVENTLATALFGLLCWDAIFAAIPGAFFHPFQREP 412 VE AVR HL + APV YVEN L +LFGLLCW+ +FAA+PGAFFHPFQR P Sbjct: 374 P--DSPVAVEYAVRDHLTSDAAPVHYVENALINSLFGLLCWEPVFAALPGAFFHPFQRGP 431 Query: 413 ADLHSADFHARRREAFAHCLARLDQERHREAILATYEDKQGVLSPFVSWGAISRELLVLA 472 ADLH+ DFHARR FA C A+LD +RE I+ DK G+ SPFV WG ++ EL+ LA Sbjct: 432 ADLHAPDFHARRATQFAACFAQLDSGVYRETIVRHLHDKAGMQSPFVFWGLLTPELVALA 491 Query: 473 LDCIPAWHLKHWCLRILEDVRENRSGFPDLIQFWPQQRRYRMIEVKGPGDRLQDNQQRWL 532 LDC+PA HLK W R+L D+R NRSG PDLI+FWP +RRY +IEVKGPGDRLQDNQ RWL Sbjct: 492 LDCLPAAHLKLWFERLLRDIRGNRSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWL 551 Query: 533 AFCAQHQMPVAVCYLQWQQQAA 554 A+CAQH MPV V ++W Q A Sbjct: 552 AYCAQHGMPVRVVDVRWAGQEA 573 >ref|YP_003607522.1| VRR-NUC domain protein [Burkholderia sp. CCGE1002] gb|ADG18011.1| VRR-NUC domain protein [Burkholderia sp. CCGE1002] Length = 589 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 293/562 (52%), Positives = 359/562 (63%), Gaps = 18/562 (3%) Query: 8 YYLDNFQQVLDWLAQRCADLLDLRERQFIAAFPGLPLPSRALLVRMMMRKGELFRTGRLD 67 YYL NF++ L WLA R DLLD E F+ F LP SRALLVRM+MR G LFR RL Sbjct: 15 YYLLNFERALAWLAARYDDLLDDEEHAFLDTFATLPQASRALLVRMLMRNGTLFRASRLV 74 Query: 68 YPEIGCPLEAAKGLPED-WVERDAALTLEQFFSLSTKPELVRAFA-----LTGAQRAARK 121 Y EIGCPL+AA + W++ + AL+L+ F+LST+ +L+ FA + GA +A RK Sbjct: 75 YDEIGCPLQAALPMTSHRWIDTEPALSLDDLFALSTRAQLLEMFADAIARIPGA-KALRK 133 Query: 122 ADLLAQLAA-------DPAWDQARVLRQWCRQGDELALRLRVQDLCDRLRLMFFGNLRQD 174 DLL L A D +R L W + L + + LCDRLRLMFFGNL QD Sbjct: 134 PDLLETLRAFYQTESGDAQACTSRPLAAWHGATTDRVLHVAIAPLCDRLRLMFFGNLHQD 193 Query: 175 WSEFVLADLGLFRYERVALSPEARGFRQRSDVDHYLRLHACSEALE--AGEDAADVMAAL 232 WSEFVLADLG+F+YE+VA P +R F+QR+D+D YL LHAC EALE + A + L Sbjct: 194 WSEFVLADLGVFQYEKVAFGPSSRAFQQRADIDVYLALHACREALEWLPVDSDATALEEL 253 Query: 233 TVAAPAGGHDNPWLQSRYERLLFKLGQHLEKQGHWPQAHAVYARCPYPGARGRAMRVLEK 292 + NPWL++R +LLF++GQ E++ W A VY C +PGAR R MRV E+ Sbjct: 254 ITTVRSIDTSNPWLETRRAKLLFRIGQDCERREQWDTALEVYDGCAWPGARHRRMRVFER 313 Query: 293 QGRYAQAYALFQAAQAAPESEAERQHLQRIGPRLTRQLGYPPMVRVRTLPPQRLDLVLAM 352 RY +A AL A AAPESE E Q + R+ PRL R+ G P P +R LVL Sbjct: 314 SERYGEALALASQADAAPESEEEAQRVARMLPRLRRKCGVPVPRAAAARPVERATLVLPK 373 Query: 353 QAGQGGQGVEAAVRAHLQAPDAPVFYVENTLATALFGLLCWDAIFAAIPGAFFHPFQREP 412 VE VR HL + APV YVEN L +LFGLLCW+ +FAA+PGAFFHPFQREP Sbjct: 374 P--DTPVPVEYVVRDHLCSDAAPVHYVENALINSLFGLLCWEPVFAALPGAFFHPFQREP 431 Query: 413 ADLHSADFHARRREAFAHCLARLDQERHREAILATYEDKQGVLSPFVSWGAISRELLVLA 472 ADLH+ DFHARR FA C A+LD +R IL K G+ SPFV WG ++ EL+ LA Sbjct: 432 ADLHAPDFHARRATQFAACFAQLDSGVYRATILRHLHQKTGMQSPFVFWGLLTPELVALA 491 Query: 473 LDCIPAWHLKHWCLRILEDVRENRSGFPDLIQFWPQQRRYRMIEVKGPGDRLQDNQQRWL 532 LDC+PA HLK W R+L D+R NRSG PDLI+FWP +RRY +IEVKGPGDRLQDNQ RWL Sbjct: 492 LDCLPAAHLKLWFERLLRDIRGNRSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWL 551 Query: 533 AFCAQHQMPVAVCYLQWQQQAA 554 A+CAQH MPV V ++W Q A Sbjct: 552 AYCAQHGMPVRVVDVRWAGQEA 573