BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0233.p (748 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774721.1| ATP-dependent Rad3-related DNA helicase c2 [... 1496 0.0 ref|YP_004473741.1| helicase c2 [Pseudomonas fulva 12-X] >gi|333... 931 0.0 ref|ZP_08274812.1| DinG family ATP-dependent helicase [Oxalobact... 924 0.0 ref|YP_004752764.1| DinG family ATP-dependent helicase [Collimon... 905 0.0 ref|ZP_07266591.1| DEAD_2 [Pseudomonas syringae pv. syringae 642] 902 0.0 ref|ZP_06879214.1| hypothetical protein PaerPAb_16386 [Pseudomon... 900 0.0 gb|EGM24436.1| hypothetical protein PA15_00822 [Pseudomonas aeru... 900 0.0 ref|YP_791374.1| hypothetical protein PA14_40350 [Pseudomonas ae... 900 0.0 ref|YP_001791540.1| helicase c2 [Leptothrix cholodnii SP-6] >gi|... 898 0.0 ref|YP_235981.1| DEAD_2 [Pseudomonas syringae pv. syringae B728a... 898 0.0 >ref|YP_003774721.1| ATP-dependent Rad3-related DNA helicase c2 [Herbaspirillum seropedicae SmR1] gb|ADJ62813.1| ATP-dependent Rad3-related DNA helicase c2 protein [Herbaspirillum seropedicae SmR1] Length = 763 Score = 1496 bits (3874), Expect = 0.0, Method: Compositional matrix adjust. Identities = 737/748 (98%), Positives = 744/748 (99%) Query: 1 VRALCEFTAKAGDLDLRFTPTPTARQGMEGHAIVASRRGEHYQSELALAIDHGALHVRGR 60 VRALCEFTAKAGDLDLRFTPTPTARQGMEGHAIVASRRGEHYQSELALAIDHGALHVRGR Sbjct: 16 VRALCEFTAKAGDLDLRFTPTPTARQGMEGHAIVASRRGEHYQSELALAIDHGALHVRGR 75 Query: 61 ADGYDADRQLLEEVKTYRGQLASIPDNHRHLHWAQLRVYGHLLCQAQGLERVNLALVYFE 120 ADGYDADRQLLEEVKTYRGQLASIPDNHRHLHWAQLRVYGHLLCQAQGLERVNLALVYFE Sbjct: 76 ADGYDADRQLLEEVKTYRGQLASIPDNHRHLHWAQLRVYGHLLCQAQGLERVNLALVYFE 135 Query: 121 IGSQQETRLEESRSREELAELFGALCERFIDWAAQELAHRQARDAALEQLRFPHGDFRPG 180 IGSQQETRLEESRSREELAELFGALCERFI WAAQELAHRQARDAALEQLRFPHGDFRPG Sbjct: 136 IGSQQETRLEESRSREELAELFGALCERFIGWAAQELAHRQARDAALEQLRFPHGDFRPG 195 Query: 181 QRQLAEAVFRAHAGRRSLLAQAPTGIGKTLGTLFPALKAAPRQQLDKILFLAAKTPARQL 240 QRQLAEAVFRAHAGRRSLLAQAPTGIGKTLGTLFPALKAAPRQQLDK+LFLAAKTP RQL Sbjct: 196 QRQLAEAVFRAHAGRRSLLAQAPTGIGKTLGTLFPALKAAPRQQLDKVLFLAAKTPGRQL 255 Query: 241 ALDAAATLKGQGVLSLRVLELSAREKACEHPERLCRGDSCPLAQGFYDRLAQARAACLDA 300 ALDAAATLKGQGVL LRVLELSAREKACEHPERLCRGDSCPLAQGFYDRLAQARAACLDA Sbjct: 256 ALDAAATLKGQGVLPLRVLELSAREKACEHPERLCRGDSCPLAQGFYDRLAQARAACLDA 315 Query: 301 PLLDRASLRQIALAHQVCPYYLGSEMTRWSDVIVGDYNYWFDGGAMLYAMAQAHDWRVSV 360 PLLDRASLRQIALAHQVCPYYLGSEMTRWSDVIVGDYNYWFDGGAMLYAMAQAHDWRVSV Sbjct: 316 PLLDRASLRQIALAHQVCPYYLGSEMTRWSDVIVGDYNYWFDGGAMLYAMAQAHDWRVSV 375 Query: 361 LADEAHNLVARARGMYSAQLSRASLQAAHAVAPAAVAKLLEKIGRAWSAIGKQALLPYQV 420 LADEAHNLVARARGMYSAQLSRASL+AA AVAPAAVAKLLEKIGRAWSAIGKQALLPYQV Sbjct: 376 LADEAHNLVARARGMYSAQLSRASLRAARAVAPAAVAKLLEKIGRAWSAIGKQALLPYQV 435 Query: 421 LEAMPPRFIDTLSAANNAISDHLAQVAVPLEPPLRDFHLEAMAFVRLAESFGPHSLLDLT 480 LEAMPPRFI+TLSAANNAISDHLAQVAVPLEPPLRDFHLEAMAFVRLAESFGPHSLLDLT Sbjct: 436 LEAMPPRFIETLSAANNAISDHLAQVAVPLEPPLRDFHLEAMAFVRLAESFGPHSLLDLT 495 Query: 481 RQDERNTVLAIRNVVPAPFLGPRFAQAHATTLFSATLGPWHYFADLLGMPKDTAWIDVES 540 RQDERNTVLA+RNVVPAPFLGPRFAQAHATTLFSATLGPWHYFADLLGMPKDTAWIDVES Sbjct: 496 RQDERNTVLAVRNVVPAPFLGPRFAQAHATTLFSATLGPWHYFADLLGMPKDTAWIDVES 555 Query: 541 PFHASQLEVRVARDISTRWQRRSASIAPITALMARQFHQRPGNYLAFFSSFDYLQQALAA 600 PFHASQLEVRVA+DISTRWQRRSASIAPITALMARQFHQRPGNYLAFFSSFDYLQQALAA Sbjct: 556 PFHASQLEVRVAQDISTRWQRRSASIAPITALMARQFHQRPGNYLAFFSSFDYLQQALAA 615 Query: 601 FTRAHPDIPTWQQSRGMSEAEREAFLARFVVGGRGIGFAVLGGSFGEGVDLPGERLIGAF 660 FTRAHPDIPTWQQSRGMSEAEREAFLARFVVGGRGIGFAVLGGSFGEGVDLPGERLIGAF Sbjct: 616 FTRAHPDIPTWQQSRGMSEAEREAFLARFVVGGRGIGFAVLGGSFGEGVDLPGERLIGAF 675 Query: 661 VATLGLPQVNEVNEQLRLRMQALFGAGYDYTYLYPGLQKVVQAAGRVIRTESDQGVVWLI 720 VATLGLPQVNEVNEQLRLRMQALFGAGYDYTYLYPGLQKVVQAAGRVIRTESDQGVVWLI Sbjct: 676 VATLGLPQVNEVNEQLRLRMQALFGAGYDYTYLYPGLQKVVQAAGRVIRTESDQGVVWLI 735 Query: 721 DERFAQPEVQALLPAWWKRDDVLRATGH 748 DERFAQPEVQALLP+WWKRDDVL+ATGH Sbjct: 736 DERFAQPEVQALLPSWWKRDDVLQATGH 763 >ref|YP_004473741.1| helicase c2 [Pseudomonas fulva 12-X] gb|AEF21647.1| helicase c2 [Pseudomonas fulva 12-X] Length = 790 Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust. Identities = 450/742 (60%), Positives = 565/742 (76%), Gaps = 5/742 (0%) Query: 1 VRALCEFTAKAGDLDLRFTPTPTARQGMEGHAIVASRRGEHYQSELALAIDHGALHVRGR 60 VRALCEFTAK GDLDLRFTP+PTA++GM GHA V +RRGEHY+SE+ LA ++ +L VRGR Sbjct: 7 VRALCEFTAKCGDLDLRFTPSPTAQEGMAGHATVVARRGEHYESEVPLAGEYTSLQVRGR 66 Query: 61 ADGYDADRQLLEEVKTYRGQLASIPDNHRHLHWAQLRVYGHLLCQAQGLERVNLALVYFE 120 ADG+D LLEE+KT+RG +A IPDNHR LHWAQ RVYG LLCQ++GL +++LA+VYF Sbjct: 67 ADGFDPLSNLLEEIKTHRGDIARIPDNHRQLHWAQARVYGWLLCQSRGLAQIDLAVVYFN 126 Query: 121 IGSQQETRLEESRSREELAELFGALCERFIDWAAQELAHRQARDAALEQLRFPHGDFRPG 180 + +Q+E+ E+R+ EL F LC+RFI WA QE AHR RD AL +LRFPH +FR G Sbjct: 127 VLTQKESVFRETRTAAELQAFFETLCQRFISWAEQEQAHRLNRDTALSELRFPHAEFRLG 186 Query: 181 QRQLAEAVFRAHAGRRSLLAQAPTGIGKTLGTLFPALKAAPRQQLDKILFLAAKTPARQL 240 QRQLAEAV+RA L+AQA TGIGKTLGTLFP LKA P +QLD++ FL AKTP RQL Sbjct: 187 QRQLAEAVYRAARDGHCLMAQATTGIGKTLGTLFPQLKAFPEKQLDRLFFLTAKTPGRQL 246 Query: 241 ALDAAATLKGQGVLSLRVLELSAREKACEHPERLCRGDSCPLAQGFYDRLAQARAACLDA 300 AL A L+G+ L LRVLE AR+KACEHP++ C G+SCPLA+GFYDRL AR A ++ Sbjct: 247 ALHALDILRGES-LPLRVLEHVARDKACEHPDKACHGESCPLARGFYDRLPAARQAAVER 305 Query: 301 PLLDRASLRQIALAHQVCPYYLGSEMTRWSDVIVGDYNYWFDGGAMLYAMAQAHDWRVSV 360 LD+A++R+IAL H+VCPYYL E+TRW+DV+V DYNY+FD A+LY++ ++WRV++ Sbjct: 306 VWLDQAAVREIALQHEVCPYYLSQELTRWADVVVCDYNYYFDLSALLYSLTLINEWRVTL 365 Query: 361 LADEAHNLVARARGMYSAQLSRASLQAAHAVAPAAVAKLLEKIGRAWSAIGKQALLPYQV 420 L DEAHNL+ RAR MYSA+L +A +A + AP ++ +L +I R W + K+ YQ Sbjct: 366 LVDEAHNLIERARRMYSAELDQARFEAMRSNAPKGLSAVLTRISRHWKQLHKEQQADYQT 425 Query: 421 LEAMPPRFIDTLSAANNAISDHLAQVAVPLEPPLRDFHLEAMAFVRLAESFGPHSLLDLT 480 P + +L A +A++DHL + L F+L+AMAF RLAE+FGPHSL D++ Sbjct: 426 YPQPPDLLLLSLQKAVSALTDHLTDQPTGNDGELLQFYLDAMAFCRLAEAFGPHSLFDIS 485 Query: 481 RQDE----RNTVLAIRNVVPAPFLGPRFAQAHATTLFSATLGPWHYFADLLGMPKDTAWI 536 RQ + ++VL +RNVVPAPFL PRF +H+TTLFSATL P Y+ADLLG+P+ T W+ Sbjct: 486 RQADLRGRSHSVLCLRNVVPAPFLAPRFEDSHSTTLFSATLSPARYYADLLGLPEATPWV 545 Query: 537 DVESPFHASQLEVRVARDISTRWQRRSASIAPITALMARQFHQRPGNYLAFFSSFDYLQQ 596 DVESPF A QLEV+ ++STR+Q R S+API ALMARQF +RPGNYLAFFSS+ YLQQ Sbjct: 546 DVESPFQAEQLEVQAVSNLSTRYQHRERSLAPIVALMARQFAERPGNYLAFFSSYAYLQQ 605 Query: 597 ALAAFTRAHPDIPTWQQSRGMSEAEREAFLARFVVGGRGIGFAVLGGSFGEGVDLPGERL 656 L F R HP + W Q+R M EAER+ FL F GG+GIGFAVLGG FGEG+DLPG+RL Sbjct: 606 VLELFDREHPQLTRWVQARQMDEAERQQFLEHFEPGGQGIGFAVLGGVFGEGIDLPGDRL 665 Query: 657 IGAFVATLGLPQVNEVNEQLRLRMQALFGAGYDYTYLYPGLQKVVQAAGRVIRTESDQGV 716 IGAF+ATLGLPQ+N +NEQ++LRM +FG+GYDYTYLYPGLQKVVQAAGRVIRT D GV Sbjct: 666 IGAFIATLGLPQINPINEQIKLRMAEMFGSGYDYTYLYPGLQKVVQAAGRVIRTPQDSGV 725 Query: 717 VWLIDERFAQPEVQALLPAWWK 738 V L+D+RF QPEV+ALLP+WW+ Sbjct: 726 VHLMDDRFTQPEVRALLPSWWQ 747 >ref|ZP_08274812.1| DinG family ATP-dependent helicase [Oxalobacteraceae bacterium IMCC9480] gb|EGF31719.1| DinG family ATP-dependent helicase [Oxalobacteraceae bacterium IMCC9480] Length = 744 Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/739 (59%), Positives = 553/739 (74%), Gaps = 1/739 (0%) Query: 1 VRALCEFTAKAGDLDLRFTPTPTARQGMEGHAIVASRRGEHYQSELALAIDHGALHVRGR 60 VRALCEFTAK GDLDLRFTP+PTA++G+ GHA+VA+RR +Y+SE++L +HG L VRGR Sbjct: 4 VRALCEFTAKQGDLDLRFTPSPTAQEGIAGHALVAARRSANYESEISLNGEHGLLRVRGR 63 Query: 61 ADGYDADRQLLEEVKTYRGQLASIPDNHRHLHWAQLRVYGHLLCQAQGLERVNLALVYFE 120 ADGYD LEE+KT+RG L +P+NHR LHWAQ R+YG L+C+ +G + LALVYF+ Sbjct: 64 ADGYDPTLHRLEEIKTFRGDLGRMPENHRALHWAQARIYGWLMCRERGWTELTLALVYFD 123 Query: 121 IGSQQETRLEESRSREELAELFGALCERFIDWAAQELAHRQARDAALEQLRFPHGDFRPG 180 I SQQET E + L + F C RF+ WA QELAHRQARDAA L FPH FR G Sbjct: 124 IASQQETVFTEVMTAAALEQFFVQQCARFLAWAEQELAHRQARDAAWSALVFPHPAFRTG 183 Query: 181 QRQLAEAVFRAHAGRRSLLAQAPTGIGKTLGTLFPALKAAPRQQLDKILFLAAKTPARQL 240 QR+LA+AV++ R +LAQAPTGIGKT+GTLFP LKAAP QQLDK+ FL AKT R L Sbjct: 184 QRELAQAVYQGVTSARCVLAQAPTGIGKTIGTLFPLLKAAPAQQLDKLFFLTAKTSGRSL 243 Query: 241 ALDAAATLKGQG-VLSLRVLELSAREKACEHPERLCRGDSCPLAQGFYDRLAQARAACLD 299 AL A A LK L LRVLEL AR+KACEHP++ C GDSCPLA+GFYDRL QARAA + Sbjct: 244 ALGAVALLKKTTPTLPLRVLELVARDKACEHPDKACHGDSCPLAKGFYDRLPQARAAAVR 303 Query: 300 APLLDRASLRQIALAHQVCPYYLGSEMTRWSDVIVGDYNYWFDGGAMLYAMAQAHDWRVS 359 +LR +AL H VCPYYL ++ RWSD+++GDYNY+FD AMLY+M A+ WR++ Sbjct: 304 DGASGSVALRTVALEHAVCPYYLAQDLVRWSDLVIGDYNYYFDSSAMLYSMTLANQWRIA 363 Query: 360 VLADEAHNLVARARGMYSAQLSRASLQAAHAVAPAAVAKLLEKIGRAWSAIGKQALLPYQ 419 VL DEAHNL+ R R MYSA+L Q +APA+V K ++K+ R W+A+ K+ PYQ Sbjct: 364 VLVDEAHNLIERGRKMYSAELDHGIFQRVRLLAPASVRKSIDKLSRCWTALLKEYAEPYQ 423 Query: 420 VLEAMPPRFIDTLSAANNAISDHLAQVAVPLEPPLRDFHLEAMAFVRLAESFGPHSLLDL 479 VL A+P +F++ L I + ++ +E L+ F+ +A+ F R+AE+FG HSL D+ Sbjct: 424 VLPALPDKFVNALQLCITNIGEFFSEYPTRIEVDLQRFYFDAIHFARMAEAFGDHSLCDI 483 Query: 480 TRQDERNTVLAIRNVVPAPFLGPRFAQAHATTLFSATLGPWHYFADLLGMPKDTAWIDVE 539 +RQD R+ VL +RNV+PAPFL PRFA +TTLFSATL PWH+++D LG+P TAWIDV Sbjct: 484 SRQDGRDAVLCLRNVIPAPFLAPRFAATRSTTLFSATLSPWHFYSDTLGLPATTAWIDVA 543 Query: 540 SPFHASQLEVRVARDISTRWQRRSASIAPITALMARQFHQRPGNYLAFFSSFDYLQQALA 599 SPF A+QL VR+ ISTR+++R+ S+ PI ALM RQ+ +RPGNYL FFSSFDYLQ A Sbjct: 544 SPFTAAQLTVRLVSTISTRFRQRADSVDPIIALMVRQYQERPGNYLTFFSSFDYLQAVTA 603 Query: 600 AFTRAHPDIPTWQQSRGMSEAEREAFLARFVVGGRGIGFAVLGGSFGEGVDLPGERLIGA 659 HP++P WQQ+R M +A RE FLARF GGRGIGFAVLGGSFGEG+DLPG+RLIGA Sbjct: 604 RLVALHPELPIWQQARRMDDAGREDFLARFAPGGRGIGFAVLGGSFGEGIDLPGDRLIGA 663 Query: 660 FVATLGLPQVNEVNEQLRLRMQALFGAGYDYTYLYPGLQKVVQAAGRVIRTESDQGVVWL 719 F+ATLGLPQ+N VNEQ+ RMQ FG+GYDYTYL+PGLQKVVQAAGRVIRT SD+G+V L Sbjct: 664 FIATLGLPQMNPVNEQIMQRMQQRFGSGYDYTYLFPGLQKVVQAAGRVIRTPSDRGIVVL 723 Query: 720 IDERFAQPEVQALLPAWWK 738 ID+R+ +P+++ALLP WW+ Sbjct: 724 IDDRYPRPQIRALLPRWWQ 742 >ref|YP_004752764.1| DinG family ATP-dependent helicase [Collimonas fungivorans Ter331] gb|AEK61941.1| DinG family ATP-dependent helicase [Collimonas fungivorans Ter331] Length = 757 Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/739 (59%), Positives = 544/739 (73%), Gaps = 1/739 (0%) Query: 1 VRALCEFTAKAGDLDLRFTPTPTARQGMEGHAIVASRRGEHYQSELALAIDHGALHVRGR 60 VRALCEFTAK GDLDLRFTP PTA +G+ GHA VASRR Y+ E++L+ G L VRGR Sbjct: 16 VRALCEFTAKQGDLDLRFTPAPTALEGIAGHATVASRRAAGYEKEISLSGRCGPLLVRGR 75 Query: 61 ADGYDADRQLLEEVKTYRGQLASIPDNHRHLHWAQLRVYGHLLCQAQGLERVNLALVYFE 120 ADGYD LEE+KT+RG L +PDNHRHLHWAQ+R+YGHLLCQA+ L + LALVY++ Sbjct: 76 ADGYDPALNRLEEIKTFRGDLERMPDNHRHLHWAQVRIYGHLLCQARQLPELQLALVYYD 135 Query: 121 IGSQQETRLEESRSREELAELFGALCERFIDWAAQELAHRQARDAALEQLRFPHGDFRPG 180 IG Q+ET L E + L + F C RF+ WA QE+AHR ARD L LRFPH DFRPG Sbjct: 136 IGRQKETLLTECATAAGLQQFFDDQCGRFLAWAQQEMAHRAARDEQLTALRFPHADFRPG 195 Query: 181 QRQLAEAVFRAHAGRRSLLAQAPTGIGKTLGTLFPALKAAPRQQLDKILFLAAKTPARQL 240 QR LAEAV++ + R LLAQAPTGIGKT+G+LFP LKA+P Q LDKI FL+AKT R L Sbjct: 196 QRALAEAVYKGASAGRCLLAQAPTGIGKTIGSLFPLLKASPGQGLDKIFFLSAKTSGRAL 255 Query: 241 ALDAAATLKGQGV-LSLRVLELSAREKACEHPERLCRGDSCPLAQGFYDRLAQARAACLD 299 AL+A+A +K L LRVLEL AR+KACEHP++ C G+SCPLAQGFYDRL QAR+A + Sbjct: 256 ALEASARIKHSAAGLPLRVLELVARDKACEHPDKACHGESCPLAQGFYDRLPQARSAAVA 315 Query: 300 APLLDRASLRQIALAHQVCPYYLGSEMTRWSDVIVGDYNYWFDGGAMLYAMAQAHDWRVS 359 + +DR SLR+IA H VCPYYL ++ RWSDVIVGDYNY+FD AMLY A+ WRV Sbjct: 316 SGAMDRESLREIAAEHGVCPYYLSQDLVRWSDVIVGDYNYYFDLSAMLYGFTIANQWRVG 375 Query: 360 VLADEAHNLVARARGMYSAQLSRASLQAAHAVAPAAVAKLLEKIGRAWSAIGKQALLPYQ 419 VL DEAHN++ RAR MYSA + +A+L++ AP + ++L+++ R W+A+ K YQ Sbjct: 376 VLVDEAHNMIERARKMYSADMEQAALKSVRQTAPPVLKRVLDRVNRQWNALYKTQEGEYQ 435 Query: 420 VLEAMPPRFIDTLSAANNAISDHLAQVAVPLEPPLRDFHLEAMAFVRLAESFGPHSLLDL 479 +P FI L A I+D++ + ++ L F+ +AM F R+AE F HSL D+ Sbjct: 436 RYAELPDAFIQALQQAVADITDYMTEHPAAVDSRLLQFYFDAMHFTRIAELFDSHSLFDI 495 Query: 480 TRQDERNTVLAIRNVVPAPFLGPRFAQAHATTLFSATLGPWHYFADLLGMPKDTAWIDVE 539 TR L +RN+VPA FL PRFA AH+TTLFSATL PWH+++ LGMP +TAW+DV Sbjct: 496 TRHGGHGATLCLRNIVPATFLAPRFAAAHSTTLFSATLSPWHFYSKTLGMPDNTAWLDVP 555 Query: 540 SPFHASQLEVRVARDISTRWQRRSASIAPITALMARQFHQRPGNYLAFFSSFDYLQQALA 599 SPF A QL VR+ ISTR+Q R S+API L+A+Q+ ++PGNYL FFSS+DYL++ A Sbjct: 556 SPFTADQLSVRLVTGISTRFQHRDRSLAPIAELIAKQYTEQPGNYLTFFSSYDYLEKVAA 615 Query: 600 AFTRAHPDIPTWQQSRGMSEAEREAFLARFVVGGRGIGFAVLGGSFGEGVDLPGERLIGA 659 F +PDIP WQQ+R M E ERE FL+RF +G+GFAVLGG+F EG+DLPG RLIGA Sbjct: 616 VFASRYPDIPLWQQARRMDEREREHFLSRFTETSQGVGFAVLGGAFAEGIDLPGARLIGA 675 Query: 660 FVATLGLPQVNEVNEQLRLRMQALFGAGYDYTYLYPGLQKVVQAAGRVIRTESDQGVVWL 719 F+ATLGLPQ+N VNEQ+ L+M LFG GYD TYLYPGLQKVVQAAGRVIRT+ D+GVV+L Sbjct: 676 FIATLGLPQINPVNEQVMLQMDKLFGQGYDCTYLYPGLQKVVQAAGRVIRTQQDRGVVYL 735 Query: 720 IDERFAQPEVQALLPAWWK 738 ID+RFA+ EV+ LLPAWW+ Sbjct: 736 IDDRFARQEVRQLLPAWWQ 754 >ref|ZP_07266591.1| DEAD_2 [Pseudomonas syringae pv. syringae 642] Length = 775 Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust. Identities = 445/743 (59%), Positives = 544/743 (73%), Gaps = 5/743 (0%) Query: 1 VRALCEFTAKAGDLDLRFTPTPTARQGMEGHAIVASRRGEHYQSELALAIDHGALHVRGR 60 VRALCEFTAK GDLDLRFTP+PTA++G+ GH VA+RRG +YQ+EL+L+ D+ L VRGR Sbjct: 27 VRALCEFTAKVGDLDLRFTPSPTAQEGIAGHRTVATRRGANYQAELSLSGDYRELTVRGR 86 Query: 61 ADGYDADRQLLEEVKTYRGQLASIPDNHRHLHWAQLRVYGHLLCQAQGLERVNLALVYFE 120 ADGYDA R LEEVKTYRG+L ++P NHR LHWAQ++VYG LLCQ LE V LALVYF Sbjct: 87 ADGYDASRNQLEEVKTYRGELDAMPANHRQLHWAQVKVYGWLLCQRLQLESVTLALVYFN 146 Query: 121 IGSQQETRLEESRSREELAELFGALCERFIDWAAQELAHRQARDAALEQLRFPHGDFRPG 180 I S+QET + E S L F C F+ WA QELAH QA L L+FPH FR G Sbjct: 147 IVSEQETLIREQFSAATLQAFFERQCTIFLGWAQQELAHTQALHTTLGSLKFPHASFRTG 206 Query: 181 QRQLAEAVFRAHAGRRSLLAQAPTGIGKTLGTLFPALKAAPRQQLDKILFLAAKTPARQL 240 QR LAE+V++A + L+AQAPTGIGKT+GTLFP LKAAP Q+LDKI FL AKTP R+L Sbjct: 207 QRVLAESVYKAVSTGCCLMAQAPTGIGKTVGTLFPLLKAAPGQKLDKIFFLTAKTPGRRL 266 Query: 241 ALDAAATLKGQGV-LSLRVLELSAREKACEHPERLCRGDSCPLAQGFYDRLAQARAACLD 299 ALDA + L LRVLEL AR+KACEHP++ C GDSCPLA GFYDRL AR+A L Sbjct: 267 ALDALEVINHSAPELKLRVLELVARDKACEHPDKACNGDSCPLASGFYDRLPVARSAALT 326 Query: 300 APLLDRASLRQIALAHQVCPYYLGSEMTRWSDVIVGDYNYWFDGGAMLYAMAQAHDWRVS 359 +P L++A +R IAL HQVCPYYL E+ RW+DV++ DYNY+FD A+L+ +AQ + WRV+ Sbjct: 327 SPWLNQAGVRAIALQHQVCPYYLSQELARWADVVIADYNYYFDLSALLFGLAQLNQWRVA 386 Query: 360 VLADEAHNLVARARGMYSAQLSRASLQAAHAVAPAAVAKLLEKIGRAWSAIGKQALLPYQ 419 VL DEAHN+V RAR MYSA L ++ L+A AP V K L+++ R W+A+ K YQ Sbjct: 387 VLVDEAHNMVERARQMYSASLDQSQLKALIQTAPEPVKKALQRLDRQWNALHKVQPGAYQ 446 Query: 420 VLEAMPPRFIDTLSAANNAISDHLAQVAVPLEPPLRDFHLEAMAFVRLAESFGPHSLLDL 479 P +FI +L+ + I DH + ++ L+ F+LEA+ F R+AE F H + D+ Sbjct: 447 AYSVAPEKFIGSLNQCISTIGDHFNEHPQAVDGTLQGFYLEAIGFARIAELFDEHFIFDI 506 Query: 480 TRQDERN----TVLAIRNVVPAPFLGPRFAQAHATTLFSATLGPWHYFADLLGMPKDTAW 535 TR++ + L++RNVVPA F+ PR A +T LFSATL P HY+ADLLG+P +TAW Sbjct: 507 TRREAGGKRILSRLSLRNVVPARFIRPRLTAARSTVLFSATLNPRHYYADLLGLPANTAW 566 Query: 536 IDVESPFHASQLEVRVARDISTRWQRRSASIAPITALMARQFHQRPGNYLAFFSSFDYLQ 595 IDVESPFH QL+VR+ ISTR+ R AS+API LMA QF RPGNYLAFFSSFDYLQ Sbjct: 567 IDVESPFHHDQLDVRIVSRISTRFTHRQASLAPIVELMAGQFDTRPGNYLAFFSSFDYLQ 626 Query: 596 QALAAFTRAHPDIPTWQQSRGMSEAEREAFLARFVVGGRGIGFAVLGGSFGEGVDLPGER 655 Q R HP I WQQ+RGM E+ER AFL RF + +GIGFAVLGG+FGEG+DLPG R Sbjct: 627 QVAELMARTHPHISLWQQARGMGESERHAFLDRFTLSSQGIGFAVLGGAFGEGIDLPGAR 686 Query: 656 LIGAFVATLGLPQVNEVNEQLRLRMQALFGAGYDYTYLYPGLQKVVQAAGRVIRTESDQG 715 LIGAF+ATLGLPQ+N VNEQ + RM ALFGAGYDYTYLYPG+QKVVQAAGRVIR++SD G Sbjct: 687 LIGAFIATLGLPQLNPVNEQFKQRMAALFGAGYDYTYLYPGVQKVVQAAGRVIRSQSDSG 746 Query: 716 VVWLIDERFAQPEVQALLPAWWK 738 VV LID+RFA+ +V+ L PAWW+ Sbjct: 747 VVMLIDDRFAEHKVKQLFPAWWR 769 >ref|ZP_06879214.1| hypothetical protein PaerPAb_16386 [Pseudomonas aeruginosa PAb1] Length = 758 Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/743 (61%), Positives = 553/743 (74%), Gaps = 5/743 (0%) Query: 1 VRALCEFTAKAGDLDLRFTPTPTARQGMEGHAIVASRRGEHYQSELALAIDHGALHVRGR 60 VRALCEF+AK GDLDLRFTP+P+A +G+ GH +V SRR HYQ E+AL + L VRGR Sbjct: 14 VRALCEFSAKRGDLDLRFTPSPSALEGIAGHTLVTSRRPAHYQREVALDGRYRHLQVRGR 73 Query: 61 ADGYDADRQLLEEVKTYRGQLASIPDNHRHLHWAQLRVYGHLLCQAQGLERVNLALVYFE 120 ADGYD LEE+KT+RG LA P NHRHLHWAQ RVYG LLC + LE V LALVY E Sbjct: 74 ADGYDPQANCLEEIKTHRGDLALQPANHRHLHWAQARVYGWLLCAERKLEEVELALVYLE 133 Query: 121 IGSQQETRLEESRSREELAELFGALCERFIDWAAQELAHRQARDAALEQLRFPHGDFRPG 180 +GSQ+ETR E +EL F + C+ F+ WA QELAHRQ RD L LRFPH +FR G Sbjct: 134 VGSQKETRFVERVRADELRLFFESQCQAFLAWAEQELAHRQRRDRELAALRFPHAEFRHG 193 Query: 181 QRQLAEAVFRAHAGRRSLLAQAPTGIGKTLGTLFPALKAAPRQQLDKILFLAAKTPARQL 240 QRQLAEAV++A + L+AQAPTGIGKT+GTLFP LKA P Q+LD++ FLAAKTP R L Sbjct: 194 QRQLAEAVYKAASAGCCLMAQAPTGIGKTIGTLFPQLKAMPGQRLDRLFFLAAKTPGRAL 253 Query: 241 ALDAAATLKGQ-GVLSLRVLELSAREKACEHPERLCRGDSCPLAQGFYDRLAQARAACLD 299 AL A +L+G+ G L +RVLEL AR+KACEHP++ C G+SCPLAQGFY+RL ARAA ++ Sbjct: 254 ALHALRSLEGETGGLPVRVLELVARDKACEHPDKACHGESCPLAQGFYERLPAARAAAVE 313 Query: 300 APLLDRASLRQIALAHQVCPYYLGSEMTRWSDVIVGDYNYWFDGGAMLYAMAQAHDWRVS 359 A LD+A LR++ALAH+VCPYYLG E+ RW D+ VGDYNY+FD GAML+ +AQ + WRV+ Sbjct: 314 ARWLDQARLREVALAHRVCPYYLGQELARWCDLAVGDYNYYFDLGAMLHGLAQVNQWRVA 373 Query: 360 VLADEAHNLVARARGMYSAQLSRASLQAAHAVAPAAVAKLLEKIGRAWSAIGKQALLPYQ 419 VL DEAHNLV R R MYSA+L + AP A+ K LE+I RAW+ +GK YQ Sbjct: 374 VLVDEAHNLVERGRRMYSAELDQGDFLGVRKTAPKALRKPLERIQRAWNELGKTQADDYQ 433 Query: 420 VLEAMPPRFIDTLSAANNAISDHLAQVAVPLEPPLRDFHLEAMAFVRLAESFGPHSLLDL 479 + P + + L A AI+D LA+ LEP L++F+ + F RLAE FG HSL D+ Sbjct: 434 AYDEPPQKLLLALQNAVAAINDLLAEQPQALEPALQEFYFAILQFGRLAELFGEHSLFDI 493 Query: 480 TRQDERN----TVLAIRNVVPAPFLGPRFAQAHATTLFSATLGPWHYFADLLGMPKDTAW 535 ++ RN L +RNVVPA FL RFA + +T LFSATLGP Y+ADLLG+P T W Sbjct: 494 EKRPGRNGRSLARLCLRNVVPAAFLAERFAASRSTVLFSATLGPRDYYADLLGLPAGTPW 553 Query: 536 IDVESPFHASQLEVRVARDISTRWQRRSASIAPITALMARQFHQRPGNYLAFFSSFDYLQ 595 ++V+SPF A QLEV + R +STR+ +R AS+API A++ QF QRPGNYLAFFSSFDYLQ Sbjct: 554 LEVDSPFSAEQLEVHIQRRVSTRYAQRQASLAPIAAILGEQFRQRPGNYLAFFSSFDYLQ 613 Query: 596 QALAAFTRAHPDIPTWQQSRGMSEAEREAFLARFVVGGRGIGFAVLGGSFGEGVDLPGER 655 Q L F +A+P +P W Q+R M EAER AFL RFV GG GIGFAVLGG+FGEG+DLPGER Sbjct: 614 QTLDVFRQAYPWVPCWSQTRRMDEAERRAFLERFVAGGEGIGFAVLGGAFGEGIDLPGER 673 Query: 656 LIGAFVATLGLPQVNEVNEQLRLRMQALFGAGYDYTYLYPGLQKVVQAAGRVIRTESDQG 715 LIGAF+ATLGLPQVN VNEQ+RLRMQ LFG GYDYTYLYPGLQKVVQAAGRVIR+ SD+G Sbjct: 674 LIGAFIATLGLPQVNPVNEQIRLRMQRLFGDGYDYTYLYPGLQKVVQAAGRVIRSRSDRG 733 Query: 716 VVWLIDERFAQPEVQALLPAWWK 738 VV LID+RFAQ V+ LLP WW+ Sbjct: 734 VVHLIDDRFAQTRVRRLLPGWWQ 756 >gb|EGM24436.1| hypothetical protein PA15_00822 [Pseudomonas aeruginosa 152504] Length = 760 Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/743 (61%), Positives = 553/743 (74%), Gaps = 5/743 (0%) Query: 1 VRALCEFTAKAGDLDLRFTPTPTARQGMEGHAIVASRRGEHYQSELALAIDHGALHVRGR 60 VRALCEF+AK GDLDLRFTP+P+A +G+ GH +V SRR HYQ E+AL + L VRGR Sbjct: 16 VRALCEFSAKRGDLDLRFTPSPSALEGIAGHTLVTSRRPAHYQREVALDGRYRHLQVRGR 75 Query: 61 ADGYDADRQLLEEVKTYRGQLASIPDNHRHLHWAQLRVYGHLLCQAQGLERVNLALVYFE 120 ADGYD LEE+KT+RG LA P NHRHLHWAQ RVYG LLC + LE V LALVY E Sbjct: 76 ADGYDPQANCLEEIKTHRGDLALQPANHRHLHWAQARVYGWLLCAERKLEEVELALVYLE 135 Query: 121 IGSQQETRLEESRSREELAELFGALCERFIDWAAQELAHRQARDAALEQLRFPHGDFRPG 180 +GSQ+ETR E +EL F + C+ F+ WA QELAHRQ RD L LRFPH +FR G Sbjct: 136 VGSQKETRFVERVRADELRLFFESQCQAFLAWAEQELAHRQRRDRELAALRFPHAEFRHG 195 Query: 181 QRQLAEAVFRAHAGRRSLLAQAPTGIGKTLGTLFPALKAAPRQQLDKILFLAAKTPARQL 240 QRQLAEAV++A + L+AQAPTGIGKT+GTLFP LKA P Q+LD++ FLAAKTP R L Sbjct: 196 QRQLAEAVYKAASAGCCLMAQAPTGIGKTIGTLFPQLKAMPGQRLDRLFFLAAKTPGRAL 255 Query: 241 ALDAAATLKGQ-GVLSLRVLELSAREKACEHPERLCRGDSCPLAQGFYDRLAQARAACLD 299 AL A +L+G+ G L +RVLEL AR+KACEHP++ C G+SCPLAQGFY+RL ARAA ++ Sbjct: 256 ALHALRSLEGETGGLPVRVLELVARDKACEHPDKACHGESCPLAQGFYERLPAARAAAVE 315 Query: 300 APLLDRASLRQIALAHQVCPYYLGSEMTRWSDVIVGDYNYWFDGGAMLYAMAQAHDWRVS 359 A LD+A LR++ALAH+VCPYYLG E+ RW D+ VGDYNY+FD GAML+ +AQ + WRV+ Sbjct: 316 ARWLDQARLREVALAHRVCPYYLGQELARWCDLAVGDYNYYFDLGAMLHGLAQVNQWRVA 375 Query: 360 VLADEAHNLVARARGMYSAQLSRASLQAAHAVAPAAVAKLLEKIGRAWSAIGKQALLPYQ 419 VL DEAHNLV R R MYSA+L + AP A+ K LE+I RAW+ +GK YQ Sbjct: 376 VLVDEAHNLVERGRRMYSAELDQGDFLGVRKTAPKALRKPLERIQRAWNELGKTQADDYQ 435 Query: 420 VLEAMPPRFIDTLSAANNAISDHLAQVAVPLEPPLRDFHLEAMAFVRLAESFGPHSLLDL 479 + P + + L A AI+D LA+ LEP L++F+ + F RLAE FG HSL D+ Sbjct: 436 AYDEPPQKLLLALQNAVAAINDLLAEQPQALEPALQEFYFAILQFGRLAELFGEHSLFDI 495 Query: 480 TRQDERN----TVLAIRNVVPAPFLGPRFAQAHATTLFSATLGPWHYFADLLGMPKDTAW 535 ++ RN L +RNVVPA FL RFA + +T LFSATLGP Y+ADLLG+P T W Sbjct: 496 EKRPGRNGRSLARLCLRNVVPAAFLAERFAASRSTVLFSATLGPRDYYADLLGLPAGTPW 555 Query: 536 IDVESPFHASQLEVRVARDISTRWQRRSASIAPITALMARQFHQRPGNYLAFFSSFDYLQ 595 ++V+SPF A QLEV + R +STR+ +R AS+API A++ QF QRPGNYLAFFSSFDYLQ Sbjct: 556 LEVDSPFSAEQLEVHIQRRVSTRYAQRQASLAPIAAILGEQFRQRPGNYLAFFSSFDYLQ 615 Query: 596 QALAAFTRAHPDIPTWQQSRGMSEAEREAFLARFVVGGRGIGFAVLGGSFGEGVDLPGER 655 Q L F +A+P +P W Q+R M EAER AFL RFV GG GIGFAVLGG+FGEG+DLPGER Sbjct: 616 QTLDVFRQAYPWVPCWSQTRRMDEAERRAFLERFVAGGEGIGFAVLGGAFGEGIDLPGER 675 Query: 656 LIGAFVATLGLPQVNEVNEQLRLRMQALFGAGYDYTYLYPGLQKVVQAAGRVIRTESDQG 715 LIGAF+ATLGLPQVN VNEQ+RLRMQ LFG GYDYTYLYPGLQKVVQAAGRVIR+ SD+G Sbjct: 676 LIGAFIATLGLPQVNPVNEQIRLRMQRLFGDGYDYTYLYPGLQKVVQAAGRVIRSRSDRG 735 Query: 716 VVWLIDERFAQPEVQALLPAWWK 738 VV LID+RFAQ V+ LLP WW+ Sbjct: 736 VVHLIDDRFAQTRVRRLLPGWWQ 758 >ref|YP_791374.1| hypothetical protein PA14_40350 [Pseudomonas aeruginosa UCBPP-PA14] ref|ZP_07796456.1| putative DNA helicase [Pseudomonas aeruginosa 39016] gb|ABJ11055.1| putative DNA helicase [Pseudomonas aeruginosa UCBPP-PA14] gb|EFQ41552.1| putative DNA helicase [Pseudomonas aeruginosa 39016] dbj|BAK89635.1| hypothetical protein NCGM2_2783 [Pseudomonas aeruginosa NCGM2.S1] Length = 758 Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/743 (61%), Positives = 553/743 (74%), Gaps = 5/743 (0%) Query: 1 VRALCEFTAKAGDLDLRFTPTPTARQGMEGHAIVASRRGEHYQSELALAIDHGALHVRGR 60 VRALCEF+AK GDLDLRFTP+P+A +G+ GH +V SRR HYQ E+AL + L VRGR Sbjct: 14 VRALCEFSAKRGDLDLRFTPSPSALEGIAGHTLVTSRRPAHYQREVALDGRYRHLQVRGR 73 Query: 61 ADGYDADRQLLEEVKTYRGQLASIPDNHRHLHWAQLRVYGHLLCQAQGLERVNLALVYFE 120 ADGYD LEE+KT+RG LA P NHRHLHWAQ RVYG LLC + LE V LALVY E Sbjct: 74 ADGYDPQANCLEEIKTHRGDLALQPANHRHLHWAQARVYGWLLCAERKLEEVELALVYLE 133 Query: 121 IGSQQETRLEESRSREELAELFGALCERFIDWAAQELAHRQARDAALEQLRFPHGDFRPG 180 +GSQ+ETR E +EL F + C+ F+ WA QELAHRQ RD L LRFPH +FR G Sbjct: 134 VGSQKETRFVERVRADELRLFFESQCQAFLAWAEQELAHRQRRDRELAALRFPHAEFRHG 193 Query: 181 QRQLAEAVFRAHAGRRSLLAQAPTGIGKTLGTLFPALKAAPRQQLDKILFLAAKTPARQL 240 QRQLAEAV++A + L+AQAPTGIGKT+GTLFP LKA P Q+LD++ FLAAKTP R L Sbjct: 194 QRQLAEAVYKAASAGCCLMAQAPTGIGKTIGTLFPQLKAMPGQRLDRLFFLAAKTPGRAL 253 Query: 241 ALDAAATLKGQ-GVLSLRVLELSAREKACEHPERLCRGDSCPLAQGFYDRLAQARAACLD 299 AL A +L+G+ G L +RVLEL AR+KACEHP++ C G+SCPLAQGFY+RL ARAA ++ Sbjct: 254 ALHALRSLEGETGGLPVRVLELVARDKACEHPDKACHGESCPLAQGFYERLPAARAAAVE 313 Query: 300 APLLDRASLRQIALAHQVCPYYLGSEMTRWSDVIVGDYNYWFDGGAMLYAMAQAHDWRVS 359 A LD+A LR++ALAH+VCPYYLG E+ RW D+ VGDYNY+FD GAML+ +AQ + WRV+ Sbjct: 314 ARWLDQARLREVALAHRVCPYYLGQELARWCDLAVGDYNYYFDLGAMLHGLAQVNQWRVA 373 Query: 360 VLADEAHNLVARARGMYSAQLSRASLQAAHAVAPAAVAKLLEKIGRAWSAIGKQALLPYQ 419 VL DEAHNLV R R MYSA+L + AP A+ K LE+I RAW+ +GK YQ Sbjct: 374 VLVDEAHNLVERGRRMYSAELDQGDFLGVRKTAPEALRKPLERIQRAWNELGKTQADDYQ 433 Query: 420 VLEAMPPRFIDTLSAANNAISDHLAQVAVPLEPPLRDFHLEAMAFVRLAESFGPHSLLDL 479 + P + + L A AI+D LA+ LEP L++F+ + F RLAE FG HSL D+ Sbjct: 434 AYDEPPQKLLLALQNAVAAINDLLAEQPQALEPALQEFYFAILQFGRLAELFGEHSLFDI 493 Query: 480 TRQDERN----TVLAIRNVVPAPFLGPRFAQAHATTLFSATLGPWHYFADLLGMPKDTAW 535 ++ RN L +RNVVPA FL RFA + +T LFSATLGP Y+ADLLG+P T W Sbjct: 494 EKRPGRNGRSLARLCLRNVVPAAFLAERFAASRSTVLFSATLGPRDYYADLLGLPAGTPW 553 Query: 536 IDVESPFHASQLEVRVARDISTRWQRRSASIAPITALMARQFHQRPGNYLAFFSSFDYLQ 595 ++V+SPF A QLEV + R +STR+ +R AS+API A++ QF QRPGNYLAFFSSFDYLQ Sbjct: 554 LEVDSPFSAEQLEVHIQRRVSTRYAQRQASLAPIAAILGEQFRQRPGNYLAFFSSFDYLQ 613 Query: 596 QALAAFTRAHPDIPTWQQSRGMSEAEREAFLARFVVGGRGIGFAVLGGSFGEGVDLPGER 655 Q L F +A+P +P W Q+R M EAER AFL RFV GG GIGFAVLGG+FGEG+DLPGER Sbjct: 614 QTLDVFRQAYPWVPCWSQTRRMDEAERRAFLERFVAGGEGIGFAVLGGAFGEGIDLPGER 673 Query: 656 LIGAFVATLGLPQVNEVNEQLRLRMQALFGAGYDYTYLYPGLQKVVQAAGRVIRTESDQG 715 LIGAF+ATLGLPQVN VNEQ+RLRMQ LFG GYDYTYLYPGLQKVVQAAGRVIR+ SD+G Sbjct: 674 LIGAFIATLGLPQVNPVNEQIRLRMQRLFGDGYDYTYLYPGLQKVVQAAGRVIRSRSDRG 733 Query: 716 VVWLIDERFAQPEVQALLPAWWK 738 VV LID+RFAQ V+ LLP WW+ Sbjct: 734 VVHLIDDRFAQARVRRLLPGWWQ 756 >ref|YP_001791540.1| helicase c2 [Leptothrix cholodnii SP-6] gb|ACB34775.1| helicase c2 [Leptothrix cholodnii SP-6] Length = 788 Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust. Identities = 458/765 (59%), Positives = 556/765 (72%), Gaps = 25/765 (3%) Query: 1 VRALCEFTAKAGDLDLRFTPTPTARQGMEGHAIVASRRGEHYQSELALAIDHGALHVRGR 60 VR LCEFTAKAGDLDLRFTP+P+A++G++GHA+VA RRG ++ E+ LA D G LHVRGR Sbjct: 8 VRTLCEFTAKAGDLDLRFTPSPSAQEGIDGHALVAGRRGPGHEVEITLAGDFGPLHVRGR 67 Query: 61 ADGYDADRQLLEEVKTYRGQLASIPDNHRHLHWAQLRVYGHLLCQAQGLERVNLALVYFE 120 ADGYDA R LEEVKT+RG+L PDNHR LHWAQ + YG L+CQA+GL ++ LALVY + Sbjct: 68 ADGYDAARNRLEEVKTHRGRLDRQPDNHRALHWAQAQTYGWLMCQARGLAQIELALVYLD 127 Query: 121 IGSQQETRLEESRSREELAELFGALCERFIDWAAQELAHRQARDAALEQLRFPHGDFRPG 180 + SQQET + S +L F A C F+ WA ELAHR ARD AL L FPH FR G Sbjct: 128 VASQQETVFTQQVSAVDLCHQFEARCGAFLAWAESELAHRSARDEALSALAFPHATFRHG 187 Query: 181 QRQLAEAVFRAHAGRRSLLAQAPTGIGKTLGTLFPALKAAPRQQLDKILFLAAKTPARQL 240 QR LAEAVF+ R L+AQAPTGIGKT+GTLFP LKA P ++LD++ FL AKT R L Sbjct: 188 QRALAEAVFKVARAGRCLMAQAPTGIGKTVGTLFPLLKAMP-ERLDRVFFLTAKTSGRAL 246 Query: 241 ALDAAATLKGQG---------------------VLSLRVLELSAREKACEHPERLCRGDS 279 ALDA A L G+ + LRVLEL AR+KACEHP++ C G+S Sbjct: 247 ALDALALLSGRPASTAEAASSPPESALHTLPARIFPLRVLELVARDKACEHPDKACNGES 306 Query: 280 CPLAQGFYDRLAQARAACLDAPLLDRASLRQIALAHQVCPYYLGSEMTRWSDVIVGDYNY 339 CPLA+GFYDRL AR A L P R S+RQ+A H +CPYYLG E+ WSDV+VGDYN+ Sbjct: 307 CPLAEGFYDRLGAARHAALSLPDWRRDSVRQLAARHHICPYYLGQELAHWSDVVVGDYNH 366 Query: 340 WFDGGAMLYAMAQAHDWRVSVLADEAHNLVARARGMYSAQLSRASLQAAHAVAPAAVAKL 399 +FD AML+ ++ H WRV++L DEAHNLV RAR MYSA+ A L+A APA + K Sbjct: 367 FFDSAAMLHGLSALHRWRVALLVDEAHNLVERARKMYSAEFDPARLKAIKRGAPAPLKKA 426 Query: 400 LEKIGRAWSAIGKQALLPYQVLEAMPPRFIDTLSAANNAISDHLAQVAVPLEPPLRDFHL 459 E++ R WSA+ + L YQVL+A P + +D L A A+ DHLA+ + ++P DF Sbjct: 427 FERVQRRWSALAAEHPLDYQVLDAAPDKLLDALQQATTAVFDHLAEHPIDVQPLWLDFCF 486 Query: 460 EAMAFVRLAESFGPHSLLDLTRQDE---RNTVLAIRNVVPAPFLGPRFAQAHATTLFSAT 516 +A+A RLAESFG HSL DL R + L +RNVVPAPFL PR A AH+TTLFSAT Sbjct: 487 DALAITRLAESFGEHSLFDLARSTQGAQPGVTLCLRNVVPAPFLTPRLAAAHSTTLFSAT 546 Query: 517 LGPWHYFADLLGMPKDTAWIDVESPFHASQLEVRVARDISTRWQRRSASIAPITALMARQ 576 L P Y ADLLG+P DTAWIDV+SPF A QL V++AR ISTRWQ RSAS+AP+ AL+ARQ Sbjct: 547 LQPRRYHADLLGLPDDTAWIDVDSPFEARQLSVQIARHISTRWQHRSASLAPVVALIARQ 606 Query: 577 FHQRPGNYLAFFSSFDYLQQALAAFTRAHPDIPTWQQSRGMSEAEREAFLARFVVGGRGI 636 + +RPGNYLAFFSSFDYL++ A F HP++P W+Q+RGMSEA + FLA+F GG GI Sbjct: 607 YAERPGNYLAFFSSFDYLERVAARFAEHHPEVPLWRQARGMSEAAQAQFLAQFRPGGCGI 666 Query: 637 GFAVLGGSFGEGVDLPGERLIGAFVATLGLPQVNEVNEQLRLRMQALFGAGYDYTYLYPG 696 GFAVLGGSF EG+DLPGERL+GAF+ATLG+PQVN VNEQ+R R++ L GAG+DYTYLYPG Sbjct: 667 GFAVLGGSFAEGIDLPGERLVGAFIATLGMPQVNAVNEQIRQRIERLCGAGFDYTYLYPG 726 Query: 697 LQKVVQAAGRVIRTESDQGVVWLIDERFAQPEVQALLPAWWKRDD 741 LQKVVQAAGRVIRT DQGVV L+D+RF + EV+ LLPAWW+ DD Sbjct: 727 LQKVVQAAGRVIRTTRDQGVVHLLDDRFGRREVRTLLPAWWQMDD 771 >ref|YP_235981.1| DEAD_2 [Pseudomonas syringae pv. syringae B728a] gb|AAY37943.1| DEAD_2 [Pseudomonas syringae pv. syringae B728a] Length = 775 Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/743 (59%), Positives = 544/743 (73%), Gaps = 5/743 (0%) Query: 1 VRALCEFTAKAGDLDLRFTPTPTARQGMEGHAIVASRRGEHYQSELALAIDHGALHVRGR 60 VRALCEFTAK GDLDLRFTP+PTA++G+ GH VA+RRG YQ+EL+L+ D+ L VRGR Sbjct: 27 VRALCEFTAKVGDLDLRFTPSPTAQEGIAGHRTVAARRGADYQAELSLSGDYRELTVRGR 86 Query: 61 ADGYDADRQLLEEVKTYRGQLASIPDNHRHLHWAQLRVYGHLLCQAQGLERVNLALVYFE 120 ADGYDA R LEEVKTYRG+L ++P NHR LHWAQ++VYG LLCQ LE V LALVYF Sbjct: 87 ADGYDASRNQLEEVKTYRGELDAMPANHRQLHWAQVKVYGWLLCQRLQLEEVTLALVYFN 146 Query: 121 IGSQQETRLEESRSREELAELFGALCERFIDWAAQELAHRQARDAALEQLRFPHGDFRPG 180 I S+QET + E S L F C F+ WA QELAH QA L L+FPH FR G Sbjct: 147 IVSEQETLIREPFSAPTLQAFFERQCTIFLGWAQQELAHTQALHTTLGSLKFPHASFRTG 206 Query: 181 QRQLAEAVFRAHAGRRSLLAQAPTGIGKTLGTLFPALKAAPRQQLDKILFLAAKTPARQL 240 QR LAE+V++A + L+AQAPTGIGKT+GTLFP LKAAP Q+LDKI FL AKTP R+L Sbjct: 207 QRVLAESVYKAVSTGCCLMAQAPTGIGKTVGTLFPLLKAAPGQKLDKIFFLTAKTPGRRL 266 Query: 241 ALDAAATLKGQGV-LSLRVLELSAREKACEHPERLCRGDSCPLAQGFYDRLAQARAACLD 299 ALDA + L LRVLEL AR+KACEHP++ C GDSCPLA GFYDRL AR+A L Sbjct: 267 ALDALKVINHSAPELKLRVLELVARDKACEHPDKACNGDSCPLASGFYDRLPAARSAALT 326 Query: 300 APLLDRASLRQIALAHQVCPYYLGSEMTRWSDVIVGDYNYWFDGGAMLYAMAQAHDWRVS 359 +P L++A +R +AL HQVCPYYL E+ RW+DV++ DYNY+FD A+L+ + Q + WRV+ Sbjct: 327 SPWLNQAGVRDVALQHQVCPYYLSQELARWADVVIADYNYYFDLSALLFGLGQLNQWRVA 386 Query: 360 VLADEAHNLVARARGMYSAQLSRASLQAAHAVAPAAVAKLLEKIGRAWSAIGKQALLPYQ 419 VL DEAHN+V RAR MYSA L ++ L+A AP V K L+++ R W+A+ K YQ Sbjct: 387 VLVDEAHNMVERARQMYSASLDQSQLKALIQTAPEPVKKALQRLDRQWNALHKAQPGTYQ 446 Query: 420 VLEAMPPRFIDTLSAANNAISDHLAQVAVPLEPPLRDFHLEAMAFVRLAESFGPHSLLDL 479 A P +FI +L+ + + I DH + ++ L+ F+L+A+ F R+AE F H + D+ Sbjct: 447 AYSAAPEKFIGSLNQSISTIGDHFNEHPQAVDGTLQGFYLDAIGFARIAELFDEHFIFDI 506 Query: 480 TRQDERN----TVLAIRNVVPAPFLGPRFAQAHATTLFSATLGPWHYFADLLGMPKDTAW 535 TR++ + L++RNVVPA F+ PR A +T LFSATL P HY+ADLLG+P +TAW Sbjct: 507 TRREAGGKRVLSRLSLRNVVPARFIRPRLTAARSTVLFSATLNPRHYYADLLGLPANTAW 566 Query: 536 IDVESPFHASQLEVRVARDISTRWQRRSASIAPITALMARQFHQRPGNYLAFFSSFDYLQ 595 IDVESPFH QL+VR+ ISTR+ R AS+API LMA+QF RPGNYLAFFSSFDYLQ Sbjct: 567 IDVESPFHHDQLDVRIVSRISTRFTHRQASLAPIVELMAKQFDARPGNYLAFFSSFDYLQ 626 Query: 596 QALAAFTRAHPDIPTWQQSRGMSEAEREAFLARFVVGGRGIGFAVLGGSFGEGVDLPGER 655 Q R HP I W Q+RGM E+ER AFL RF + +GIGFAVLGG+FGEG+DLPG R Sbjct: 627 QVAELMARTHPHISLWLQARGMGESERHAFLDRFTLSSQGIGFAVLGGAFGEGIDLPGAR 686 Query: 656 LIGAFVATLGLPQVNEVNEQLRLRMQALFGAGYDYTYLYPGLQKVVQAAGRVIRTESDQG 715 LIGAF+ATLGLPQ+N VNEQ + RM ALFGAGYDYTYLYPG+QKVVQAAGRVIR++SD G Sbjct: 687 LIGAFIATLGLPQLNPVNEQFKQRMAALFGAGYDYTYLYPGVQKVVQAAGRVIRSQSDSG 746 Query: 716 VVWLIDERFAQPEVQALLPAWWK 738 VV LID+RFA+ +V+ L PAWW+ Sbjct: 747 VVMLIDDRFAEHKVKQLFPAWWR 769